Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
00:45:41 (648271): wrapper (7.7.26015): starting
00:45:41 (648271): wrapper: running run_atlas (--nthreads 4)
[2025-04-13 00:45:41] Arguments: --nthreads 4
[2025-04-13 00:45:41] Threads: 4
[2025-04-13 00:45:41] Checking for CVMFS
[2025-04-13 00:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 00:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 00:45:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 00:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 00:45:41] 2.12.7.0 302542 210 51592 144792 1 187 2169593 4096000 2370 130560 0 905440 99.996 70948 2205 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-13 00:45:41] CVMFS is ok
[2025-04-13 00:45:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 00:45:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-13 00:45:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-13 00:45:41] Further information can be found at the LHC@home message board.
[2025-04-13 00:45:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 00:45:41] Checking for apptainer binary...
[2025-04-13 00:45:41] apptainer is not installed, using version from CVMFS
[2025-04-13 00:45:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 00:45:41] minis
[2025-04-13 00:45:41] apptainer works
[2025-04-13 00:45:41] Set ATHENA_PROC_NUMBER=4
[2025-04-13 00:45:41] Set ATHENA_CORE_NUMBER=4
[2025-04-13 00:45:41] Starting ATLAS job with PandaID=6600461712
[2025-04-13 00:45:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 01:53:06]  *** The last 200 lines of the pilot log: ***
[2025-04-13 01:53:06]  protocol_id=None
[2025-04-13 01:53:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-13 01:53:06]  replicas=None
[2025-04-13 01:53:06]  scope=mc23_13p6TeV
[2025-04-13 01:53:06]  status=None
[2025-04-13 01:53:06]  status_code=0
[2025-04-13 01:53:06]  storage_token=
[2025-04-13 01:53:06]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6600461712/log.44075164._046560.job.log.tgz.1
[2025-04-13 01:53:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/8b/log.44075164._046560.job.log.tgz.1
[2025-04-13 01:53:06]  workdir=None
[2025-04-13 01:53:06] ]
[2025-04-13 01:53:06] 2025-04-13 00:52:42,001 | INFO     | transferring file log.44075164._046560.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6600461712/log.44075164._046560.job.log.tgz.1 to /var/lib/boinc
[2025-04-13 01:53:06] 2025-04-13 00:52:42,001 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6600461712/log.44075164._046560.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.440751
[2025-04-13 01:53:06] 2025-04-13 00:52:42,006 | INFO     | adding to output.list: log.44075164._046560.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/8b/log.44075164._046560.job.log.tg
[2025-04-13 01:53:06] 2025-04-13 00:52:42,007 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-13 01:53:06] 2025-04-13 00:52:42,007 | INFO     | summary of transferred files:
[2025-04-13 01:53:06] 2025-04-13 00:52:42,007 | INFO     |  -- lfn=log.44075164._046560.job.log.tgz.1, status_code=0, status=transferred
[2025-04-13 01:53:06] 2025-04-13 00:52:42,007 | INFO     | stage-out finished correctly
[2025-04-13 01:53:06] 2025-04-13 00:52:45,146 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-13 01:53:06] 2025-04-13 00:52:45,772 | INFO     | job 6600461712 has state=finished
[2025-04-13 01:53:06] 2025-04-13 00:52:45,772 | INFO     | preparing for final server update for job 6600461712 in state='finished'
[2025-04-13 01:53:06] 2025-04-13 00:52:45,772 | INFO     | this job has now completed (state=finished)
[2025-04-13 01:53:06] 2025-04-13 00:52:45,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-13 01:53:06] 2025-04-13 00:52:45,772 | INFO     | log transfer has been attempted: DONE
[2025-04-13 01:53:06] 2025-04-13 00:52:45,772 | INFO     | job 6600461712 has finished - writing final server update
[2025-04-13 01:53:06] 2025-04-13 00:52:45,772 | INFO     | total number of processed events: 400 (read)
[2025-04-13 01:53:06] 2025-04-13 00:52:45,773 | INFO     | executing command: lscpu
[2025-04-13 01:53:06] 2025-04-13 00:52:45,782 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-13 01:53:06] 2025-04-13 00:52:46,654 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-13 01:53:06] 2025-04-13 00:52:46,654 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6600461712/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 01:53:06] 2025-04-13 00:52:46,655 | INFO     | extracted standard info from prmon json
[2025-04-13 01:53:06] 2025-04-13 00:52:46,655 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 01:53:06] 2025-04-13 00:52:46,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 01:53:06] 2025-04-13 00:52:46,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 01:53:06] 2025-04-13 00:52:46,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 01:53:06] 2025-04-13 00:52:46,655 | INFO     | fitting pss+swap vs Time
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | sum of square deviations: 63666310.0
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | sum of deviations: 9233195338.000002
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | mean x: 1744503635.0
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | mean y: 2246671.084745763
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | -- intersect: -252994084195.36655
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | intersect: -252994084195.36655
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | chi2: 1.4512646237102051
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | -- intersect: -252994084195.36655
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | current memory leak: 145.02 B/s (using 59 data points, chi2=1.45)
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | ..............................
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | . Timing measurements:
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | . get job = 0 s
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | . initial setup = 3 s
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | . payload setup = 1 s
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | . stage-in = 0 s
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | . payload execution = 3998 s
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | . stage-out = 0 s
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | . log creation = 0 s
[2025-04-13 01:53:06] 2025-04-13 00:52:46,656 | INFO     | ..............................
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | 
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | job summary report
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | --------------------------------------------------
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | PanDA job id: 6600461712
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | task id: 44075164
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | errors: (none)
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | pilot state: finished 
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | transexitcode: 0
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | exeerrorcode: 0
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | exeerrordiag: 
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | exitcode: 0
[2025-04-13 01:53:06] 2025-04-13 00:52:46,683 | INFO     | exitmsg: OK
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | cpuconsumptiontime: 13403 s
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | nevents: 400
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | neventsw: 0
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | pid: 658691
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | pgrp: 658691
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | corecount: 4
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | event service: False
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | sizes: {0: 2417220, 1: 2417362, 2: 2417568, 11: 2417596, 4003: 2443449, 4004: 2452404, 4007: 2452588, 4008: 2452758}
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | --------------------------------------------------
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | 
[2025-04-13 01:53:06] 2025-04-13 00:52:46,684 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | job 6600461712 has completed (purged errors)
[2025-04-13 01:53:06] 2025-04-13 00:52:46,691 | INFO     | overall cleanup function is called
[2025-04-13 01:53:06] 2025-04-13 00:52:47,638 | WARNING  | process 658691 can no longer be monitored (due to stat problems) - aborting
[2025-04-13 01:53:06] 2025-04-13 00:52:47,658 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 01:53:06] 2025-04-13 00:52:47,658 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 01:53:06] 2025-04-13 00:52:47,659 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/2/PanDA_Pilot-6600461712/payload.stdout) since it has not been created yet
[2025-04-13 01:53:06] 2025-04-13 00:52:47,659 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-04-13 01:53:06] 2025-04-13 00:52:47,665 | INFO     | sufficient remaining disk space (65042120704 B)
[2025-04-13 01:53:06] 2025-04-13 00:52:47,665 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-04-13 01:53:06] 2025-04-13 00:52:47,665 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/2/PanDA_Pilot-6600461712/HITS.44075164._046560.pool.root.1 since it does not exist
[2025-04-13 01:53:06] 2025-04-13 00:52:47,693 | INFO     | number of running child processes to parent process 658691: 1
[2025-04-13 01:53:06] 2025-04-13 00:52:47,693 | INFO     | maximum number of monitored processes: 6
[2025-04-13 01:53:06] 2025-04-13 00:52:47,693 | INFO     | aborting job monitoring since job object (job id=6600461712) has expired
[2025-04-13 01:53:06] 2025-04-13 00:52:47,697 | INFO     | --- collectZombieJob: --- 10, [658691]
[2025-04-13 01:53:06] 2025-04-13 00:52:47,697 | INFO     | zombie collector waiting for pid 658691
[2025-04-13 01:53:06] 2025-04-13 00:52:47,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 01:53:06] 2025-04-13 00:52:47,697 | INFO     | collected zombie processes
[2025-04-13 01:53:06] 2025-04-13 00:52:47,697 | INFO     | will attempt to kill all subprocesses of pid=658691
[2025-04-13 01:53:06] 2025-04-13 00:52:47,722 | INFO     | process IDs to be killed: [658691] (in reverse order)
[2025-04-13 01:53:06] 2025-04-13 00:52:47,734 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 01:53:06] 2025-04-13 00:52:47,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 01:53:06] 2025-04-13 00:52:47,735 | INFO     | did not find any defunct processes belonging to 658691
[2025-04-13 01:53:06] 2025-04-13 00:52:47,736 | INFO     | did not find any defunct processes belonging to 658691
[2025-04-13 01:53:06] 2025-04-13 00:52:47,736 | INFO     | ready for new job
[2025-04-13 01:53:06] 2025-04-13 00:52:47,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 01:53:06] 2025-04-13 00:52:47,736 | INFO     | **************************************
[2025-04-13 01:53:06] 2025-04-13 00:52:47,736 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 01:53:06] 2025-04-13 00:52:47,736 | INFO     | **************************************
[2025-04-13 01:53:06] 2025-04-13 00:52:47,736 | INFO     | 
[2025-04-13 01:53:06] 2025-04-13 00:52:47,737 | INFO     | architecture information:
[2025-04-13 01:53:06] 2025-04-13 00:52:47,737 | INFO     | executing command: cat /etc/os-release
[2025-04-13 01:53:06] 2025-04-13 00:52:47,741 | INFO     | cat /etc/os-release:
[2025-04-13 01:53:06] NAME="CentOS Linux"
[2025-04-13 01:53:06] VERSION="7 (Core)"
[2025-04-13 01:53:06] ID="centos"
[2025-04-13 01:53:06] ID_LIKE="rhel fedora"
[2025-04-13 01:53:06] VERSION_ID="7"
[2025-04-13 01:53:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 01:53:06] ANSI_COLOR="0;31"
[2025-04-13 01:53:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 01:53:06] HOME_URL="https://www.centos.org/"
[2025-04-13 01:53:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 01:53:06] 
[2025-04-13 01:53:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 01:53:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 01:53:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 01:53:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 01:53:06] 
[2025-04-13 01:53:06] 2025-04-13 00:52:47,741 | INFO     | **************************************
[2025-04-13 01:53:06] 2025-04-13 00:52:48,243 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | INFO     | sufficient remaining disk space (65042120704 B)
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | INFO     | update_server=False
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 01:53:06] 2025-04-13 00:52:48,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 01:53:06] 2025-04-13 00:52:48,251 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 01:53:06] 2025-04-13 00:52:48,251 | INFO     | will abort loop
[2025-04-13 01:53:06] 2025-04-13 00:52:48,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 01:53:06] 2025-04-13 00:52:48,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 01:53:06] 2025-04-13 00:52:48,313 | INFO     | all payload control threads have been joined
[2025-04-13 01:53:06] 2025-04-13 00:52:48,656 | INFO     | all data control threads have been joined
[2025-04-13 01:53:06] 2025-04-13 00:52:49,255 | INFO     | [job] retrieve thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,256 | INFO     | [job] queue monitor thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,256 | INFO     | [job] job monitor thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,318 | INFO     | [payload] control thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,323 | INFO     | [data] copytool_in thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,541 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,643 | INFO     | all job control threads have been joined
[2025-04-13 01:53:06] 2025-04-13 00:52:49,661 | INFO     | [data] control thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,767 | INFO     | [job] validate thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,929 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:49,945 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:50,069 | INFO     | [payload] validate_post thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:50,255 | INFO     | [data] copytool_out thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:50,640 | INFO     | [payload] failed_post thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:50,649 | INFO     | [job] control thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:51,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 01:53:06] 2025-04-13 00:52:55,187 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:52:58,531 | INFO     | job.realtimelogging is not enabled
[2025-04-13 01:53:06] 2025-04-13 00:52:59,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 01:53:06] 2025-04-13 00:53:01,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126046244607808)>', '<ExcThread(monitor, started 126045478975232)>']
[2025-04-13 01:53:06] 2025-04-13 00:53:02,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 01:53:06] 2025-04-13 00:53:02,318 | INFO     | [monitor] control thread has ended
[2025-04-13 01:53:06] 2025-04-13 00:53:06,478 | INFO     | all workflow threads have been joined
[2025-04-13 01:53:06] 2025-04-13 00:53:06,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 01:53:06] 2025-04-13 00:53:06,478 | INFO     | traces error code: 0
[2025-04-13 01:53:06] 2025-04-13 00:53:06,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 01:53:06] 2025-04-13 00:53:06,515 [wrapper] ==== pilot stdout END ====
[2025-04-13 01:53:06] 2025-04-13 00:53:06,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 01:53:06] 2025-04-13 00:53:06,517 [wrapper] pilotpid: 652037
[2025-04-13 01:53:06] 2025-04-13 00:53:06,518 [wrapper] Pilot exit status: 0
[2025-04-13 01:53:06] 2025-04-13 00:53:06,521 [wrapper] pandaids: 6600461712
[2025-04-13 01:53:06] 2025-04-13 00:53:06,529 [wrapper] cleanup supervisor_pilot  688393 652038
[2025-04-13 01:53:06] 2025-04-13 00:53:06,530 [wrapper] Test setup, not cleaning
[2025-04-13 01:53:06] 2025-04-13 00:53:06,531 [wrapper] apfmon messages muted
[2025-04-13 01:53:06] 2025-04-13 00:53:06,531 [wrapper] ==== wrapper stdout END ====
[2025-04-13 01:53:06] 2025-04-13 00:53:06,532 [wrapper] ==== wrapper stderr END ====
[2025-04-13 01:53:06]  *** Error codes and diagnostics ***
[2025-04-13 01:53:06]     "exeErrorCode": 0,
[2025-04-13 01:53:06]     "exeErrorDiag": "",
[2025-04-13 01:53:06]     "pilotErrorCode": 0,
[2025-04-13 01:53:06]     "pilotErrorDiag": "",
[2025-04-13 01:53:06]  *** Listing of results directory ***
[2025-04-13 01:53:06] total 411344
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc    495897 Apr 12 17:10 pilot3.tar.gz
[2025-04-13 01:53:06] -rwx------ 1 boinc boinc     37140 Apr 12 17:27 runpilot2-wrapper.sh
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc      5111 Apr 12 17:27 queuedata.json
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc       100 Apr 13 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 01:53:06] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 00:45 run_atlas
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc       105 Apr 13 00:45 job.xml
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc      6792 Apr 13 00:45 init_data.xml
[2025-04-13 01:53:06] -rw-r--r-- 2 boinc boinc 223257087 Apr 13 00:45 EVNT.44075162._001810.pool.root.1
[2025-04-13 01:53:06] -rw-r--r-- 2 boinc boinc     17569 Apr 13 00:45 start_atlas.sh
[2025-04-13 01:53:06] drwxrwx--x 1 boinc boinc        76 Apr 13 00:45 shared
[2025-04-13 01:53:06] -rw-r--r-- 2 boinc boinc    508872 Apr 13 00:45 input.tar.gz
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc         0 Apr 13 00:45 boinc_lockfile
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc      2550 Apr 13 00:45 pandaJob.out
[2025-04-13 01:53:06] -rw------- 1 boinc boinc       424 Apr 13 00:45 setup.sh.local
[2025-04-13 01:53:06] -rw------- 1 boinc boinc    985800 Apr 13 00:45 agis_schedconf.cvmfs.json
[2025-04-13 01:53:06] -rw------- 1 boinc boinc   1603529 Apr 13 00:45 agis_ddmendpoints.agis.ALL.json
[2025-04-13 01:53:06] drwx------ 1 boinc boinc       368 Apr 13 00:45 pilot3
[2025-04-13 01:53:06] -rw------- 1 boinc boinc        95 Apr 13 01:52 pilot_heartbeat.json
[2025-04-13 01:53:06] -rw------- 1 boinc boinc 192816101 Apr 13 01:52 HITS.44075164._046560.pool.root.1
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc       529 Apr 13 01:52 boinc_task_state.xml
[2025-04-13 01:53:06] -rw------- 1 boinc boinc      1021 Apr 13 01:52 memory_monitor_summary.json
[2025-04-13 01:53:06] -rw------- 1 boinc boinc    243708 Apr 13 01:52 log.44075164._046560.job.log.tgz.1
[2025-04-13 01:53:06] -rw------- 1 boinc boinc      7657 Apr 13 01:52 heartbeat.json
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc      8192 Apr 13 01:52 boinc_mmap_file
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc        27 Apr 13 01:52 wrapper_checkpoint.txt
[2025-04-13 01:53:06] -rw------- 1 boinc boinc      4557 Apr 13 01:53 pilotlog.txt
[2025-04-13 01:53:06] -rw------- 1 boinc boinc    417045 Apr 13 01:53 log.44075164._046560.job.log.1
[2025-04-13 01:53:06] -rw------- 1 boinc boinc       357 Apr 13 01:53 output.list
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc       620 Apr 13 01:53 runtime_log
[2025-04-13 01:53:06] -rw------- 1 boinc boinc    675840 Apr 13 01:53 result.tar.gz
[2025-04-13 01:53:06] -rw------- 1 boinc boinc       643 Apr 13 01:53 sjcLDm1ssN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjrRLDm1lft0m.diag
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc     11107 Apr 13 01:53 runtime_log.err
[2025-04-13 01:53:06] -rw-r--r-- 1 boinc boinc     21998 Apr 13 01:53 stderr.txt
[2025-04-13 01:53:06] HITS file was successfully produced:
[2025-04-13 01:53:06] -rw------- 1 boinc boinc 192816101 Apr 13 01:52 shared/HITS.pool.root.1
[2025-04-13 01:53:06]  *** Contents of shared directory: ***
[2025-04-13 01:53:06] total 407508
[2025-04-13 01:53:06] -rw-r--r-- 2 boinc boinc 223257087 Apr 13 00:45 ATLAS.root_0
[2025-04-13 01:53:06] -rw-r--r-- 2 boinc boinc     17569 Apr 13 00:45 start_atlas.sh
[2025-04-13 01:53:06] -rw-r--r-- 2 boinc boinc    508872 Apr 13 00:45 input.tar.gz
[2025-04-13 01:53:06] -rw------- 1 boinc boinc 192816101 Apr 13 01:52 HITS.pool.root.1
[2025-04-13 01:53:06] -rw------- 1 boinc boinc    675840 Apr 13 01:53 result.tar.gz
01:53:08 (648271): run_atlas exited; CPU time 13431.992338
01:53:08 (648271): called boinc_finish(0)

</stderr_txt>
]]>

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