Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:49:33 (45613): wrapper (7.7.26015): starting
15:49:33 (45613): wrapper: running run_atlas (--nthreads 8)
[2025-04-12 15:49:33] Arguments: --nthreads 8
[2025-04-12 15:49:33] Threads: 8
[2025-04-12 15:49:33] Checking for CVMFS
[2025-04-12 15:49:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 15:49:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 15:49:35] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 15:49:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 15:49:38] 2.11.2.0 44558 32852 382780 144785 3 227 14911579 18432001 19780 130560 0 137415879 98.943 332346451 36550 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 15:49:38] CVMFS is ok
[2025-04-12 15:49:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 15:49:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 15:49:38] Further information can be found at the LHC@home message board.
[2025-04-12 15:49:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 15:49:38] Checking for apptainer binary...
[2025-04-12 15:49:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 15:49:38] Running /usr/bin/apptainer --version
[2025-04-12 15:49:39] apptainer version 1.3.2-1.el7
[2025-04-12 15:49:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 15:50:17] c-211-12.aglt2.org
[2025-04-12 15:50:17] apptainer works
[2025-04-12 15:50:17] Set ATHENA_PROC_NUMBER=8
[2025-04-12 15:50:17] Set ATHENA_CORE_NUMBER=8
[2025-04-12 15:50:18] Starting ATLAS job with PandaID=6600461296
[2025-04-12 15:50:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:20:26 (34162): wrapper (7.7.26015): starting
09:20:26 (34162): wrapper: running run_atlas (--nthreads 8)
[2025-04-13 09:20:26] Arguments: --nthreads 8
[2025-04-13 09:20:26] Threads: 8
[2025-04-13 09:20:26] This job has been restarted, cleaning up previous attempt
[2025-04-13 09:20:26] Checking for CVMFS
[2025-04-13 09:20:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 09:20:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 09:20:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 09:20:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 09:20:31] 2.11.2.0 44558 33903 386436 144812 1 34 16217069 18432001 14550 130560 0 140990430 98.955 335723158 36589 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-13 09:20:31] CVMFS is ok
[2025-04-13 09:20:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-13 09:20:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-13 09:20:31] Further information can be found at the LHC@home message board.
[2025-04-13 09:20:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 09:20:31] Checking for apptainer binary...
[2025-04-13 09:20:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 09:20:31] Running /usr/bin/apptainer --version
[2025-04-13 09:20:31] apptainer version 1.3.2-1.el7
[2025-04-13 09:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 09:20:57] c-211-12.aglt2.org
[2025-04-13 09:20:57] apptainer works
[2025-04-13 09:20:57] Set ATHENA_PROC_NUMBER=8
[2025-04-13 09:20:57] Set ATHENA_CORE_NUMBER=8
[2025-04-13 09:20:57] Starting ATLAS job with PandaID=6600461296
[2025-04-13 09:20:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-14 08:21:02]  *** The last 200 lines of the pilot log: ***
[2025-04-14 08:21:02] 2025-04-14 12:20:33,214 | INFO     | extracted standard info from prmon json
[2025-04-14 08:21:02] 2025-04-14 12:20:33,214 | INFO     | extracted standard memory fields from prmon json
[2025-04-14 08:21:02] 2025-04-14 12:20:33,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-14 08:21:02] 2025-04-14 12:20:33,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-14 08:21:02] 2025-04-14 12:20:33,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-14 08:21:02] 2025-04-14 12:20:33,238 | INFO     | fitting pss+swap vs Time
[2025-04-14 08:21:02] 2025-04-14 12:20:33,241 | INFO     | sum of square deviations: 757847546784.8372
[2025-04-14 08:21:02] 2025-04-14 12:20:33,357 | INFO     | sum of deviations: 2503690236941.406
[2025-04-14 08:21:02] 2025-04-14 12:20:33,357 | INFO     | mean x: 1744592072.0868597
[2025-04-14 08:21:02] 2025-04-14 12:20:33,377 | INFO     | mean y: 2423625.4922049
[2025-04-14 08:21:02] 2025-04-14 12:20:33,377 | INFO     | -- intersect: -5761160563.517985
[2025-04-14 08:21:02] 2025-04-14 12:20:33,377 | INFO     | intersect: -5761160563.517985
[2025-04-14 08:21:02] 2025-04-14 12:20:33,380 | INFO     | chi2: 19.165146526350988
[2025-04-14 08:21:02] 2025-04-14 12:20:33,396 | INFO     | sum of square deviations: 749439848550.7695
[2025-04-14 08:21:02] 2025-04-14 12:20:34,103 | INFO     | sum of deviations: 2864764258793.086
[2025-04-14 08:21:02] 2025-04-14 12:20:34,103 | INFO     | mean x: 1744591919.589419
[2025-04-14 08:21:02] 2025-04-14 12:20:34,103 | INFO     | mean y: 2430169.5409836066
[2025-04-14 08:21:02] 2025-04-14 12:20:34,103 | INFO     | -- intersect: -6666343297.847465
[2025-04-14 08:21:02] 2025-04-14 12:20:34,104 | INFO     | intersect: -6666343297.847465
[2025-04-14 08:21:02] 2025-04-14 12:20:34,148 | INFO     | chi2: 15.88078848430698
[2025-04-14 08:21:02] 2025-04-14 12:20:34,148 | INFO     | current chi2=15.88078848430698 (change=17.1371402641154 %)
[2025-04-14 08:21:02] 2025-04-14 12:20:34,148 | INFO     | right removable region: 1341
[2025-04-14 08:21:02] 2025-04-14 12:20:34,187 | INFO     | sum of square deviations: 749439119356.4093
[2025-04-14 08:21:02] 2025-04-14 12:20:34,403 | INFO     | sum of deviations: 2023991324899.3167
[2025-04-14 08:21:02] 2025-04-14 12:20:34,403 | INFO     | mean x: 1744592224.590909
[2025-04-14 08:21:02] 2025-04-14 12:20:34,403 | INFO     | mean y: 2432325.1736214603
[2025-04-14 08:21:02] 2025-04-14 12:20:34,404 | INFO     | -- intersect: -4709143888.103218
[2025-04-14 08:21:02] 2025-04-14 12:20:34,404 | INFO     | intersect: -4709143888.103218
[2025-04-14 08:21:02] 2025-04-14 12:20:34,410 | INFO     | chi2: 14.25333432262313
[2025-04-14 08:21:02] 2025-04-14 12:20:34,410 | INFO     | current chi2=14.25333432262313 (change=25.628878949474217 %)
[2025-04-14 08:21:02] 2025-04-14 12:20:34,416 | INFO     | sum of square deviations: 741093111702.936
[2025-04-14 08:21:02] 2025-04-14 12:20:34,620 | INFO     | sum of deviations: 1604078751017.7192
[2025-04-14 08:21:02] 2025-04-14 12:20:34,620 | INFO     | mean x: 1744592377.0949888
[2025-04-14 08:21:02] 2025-04-14 12:20:34,620 | INFO     | mean y: 2439997.7187733734
[2025-04-14 08:21:02] 2025-04-14 12:20:34,620 | INFO     | -- intersect: -3773689502.1966376
[2025-04-14 08:21:02] 2025-04-14 12:20:34,620 | INFO     | intersect: -3773689502.1966376
[2025-04-14 08:21:02] 2025-04-14 12:20:34,626 | INFO     | chi2: 10.592498992068151
[2025-04-14 08:21:02] 2025-04-14 12:20:34,627 | INFO     | current chi2=10.592498992068151 (change=25.684062744142892 %)
[2025-04-14 08:21:02] 2025-04-14 12:20:34,629 | INFO     | sum of square deviations: 732809372698.1171
[2025-04-14 08:21:02] 2025-04-14 12:20:34,734 | INFO     | sum of deviations: 1262115598205.4111
[2025-04-14 08:21:02] 2025-04-14 12:20:34,734 | INFO     | mean x: 1744592529.5983484
[2025-04-14 08:21:02] 2025-04-14 12:20:34,734 | INFO     | mean y: 2446292.641891892
[2025-04-14 08:21:02] 2025-04-14 12:20:34,734 | INFO     | -- intersect: -3002260696.860248
[2025-04-14 08:21:02] 2025-04-14 12:20:34,734 | INFO     | intersect: -3002260696.860248
[2025-04-14 08:21:02] 2025-04-14 12:20:34,736 | INFO     | chi2: 8.219421669174748
[2025-04-14 08:21:02] 2025-04-14 12:20:34,737 | INFO     | current chi2=8.219421669174748 (change=22.403375489300544 %)
[2025-04-14 08:21:02] 2025-04-14 12:20:34,737 | INFO     | left removable region: 30
[2025-04-14 08:21:02] 2025-04-14 12:20:34,743 | INFO     | sum of square deviations: 698692480161.4025
[2025-04-14 08:21:02] 2025-04-14 12:20:34,908 | INFO     | sum of deviations: 870677625474.572
[2025-04-14 08:21:02] 2025-04-14 12:20:34,908 | INFO     | mean x: 1744592804.109077
[2025-04-14 08:21:02] 2025-04-14 12:20:34,909 | INFO     | mean y: 2467117.590389016
[2025-04-14 08:21:02] 2025-04-14 12:20:34,909 | INFO     | -- intersect: -2171562177.4591618
[2025-04-14 08:21:02] 2025-04-14 12:20:34,909 | INFO     | intersect: -2171562177.4591618
[2025-04-14 08:21:02] 2025-04-14 12:20:34,918 | INFO     | chi2: 0.8790064924393707
[2025-04-14 08:21:02] 2025-04-14 12:20:34,918 | INFO     | -- intersect: -2171562177.4591618
[2025-04-14 08:21:02] 2025-04-14 12:20:34,918 | INFO     | current memory leak: 1.25 B/s (using 1311 data points, chi2=0.88)
[2025-04-14 08:21:02] 2025-04-14 12:20:34,920 | INFO     | ..............................
[2025-04-14 08:21:02] 2025-04-14 12:20:34,920 | INFO     | . Timing measurements:
[2025-04-14 08:21:02] 2025-04-14 12:20:34,921 | INFO     | . get job = 0 s
[2025-04-14 08:21:02] 2025-04-14 12:20:34,921 | INFO     | . initial setup = 11 s
[2025-04-14 08:21:02] 2025-04-14 12:20:34,921 | INFO     | . payload setup = 116 s
[2025-04-14 08:21:02] 2025-04-14 12:20:34,928 | INFO     | . stage-in = 0 s
[2025-04-14 08:21:02] 2025-04-14 12:20:34,928 | INFO     | . payload execution = 82246 s
[2025-04-14 08:21:02] 2025-04-14 12:20:34,928 | INFO     | . stage-out = 9 s
[2025-04-14 08:21:02] 2025-04-14 12:20:34,928 | INFO     | . log creation = 3 s
[2025-04-14 08:21:02] 2025-04-14 12:20:34,928 | INFO     | ..............................
[2025-04-14 08:21:02] 2025-04-14 12:20:36,240 | INFO     | 
[2025-04-14 08:21:02] 2025-04-14 12:20:36,240 | INFO     | job summary report
[2025-04-14 08:21:02] 2025-04-14 12:20:36,241 | INFO     | --------------------------------------------------
[2025-04-14 08:21:02] 2025-04-14 12:20:36,241 | INFO     | PanDA job id: 6600461296
[2025-04-14 08:21:02] 2025-04-14 12:20:36,241 | INFO     | task id: 44075164
[2025-04-14 08:21:02] 2025-04-14 12:20:36,247 | INFO     | errors: (none)
[2025-04-14 08:21:02] 2025-04-14 12:20:36,247 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-14 08:21:02] 2025-04-14 12:20:36,248 | INFO     | pilot state: finished 
[2025-04-14 08:21:02] 2025-04-14 12:20:36,248 | INFO     | transexitcode: 0
[2025-04-14 08:21:02] 2025-04-14 12:20:36,248 | INFO     | exeerrorcode: 0
[2025-04-14 08:21:02] 2025-04-14 12:20:36,248 | INFO     | exeerrordiag: 
[2025-04-14 08:21:02] 2025-04-14 12:20:36,248 | INFO     | exitcode: 0
[2025-04-14 08:21:02] 2025-04-14 12:20:36,248 | INFO     | exitmsg: OK
[2025-04-14 08:21:02] 2025-04-14 12:20:36,248 | INFO     | cpuconsumptiontime: 63741 s
[2025-04-14 08:21:02] 2025-04-14 12:20:36,248 | INFO     | nevents: 400
[2025-04-14 08:21:02] 2025-04-14 12:20:36,249 | INFO     | neventsw: 0
[2025-04-14 08:21:02] 2025-04-14 12:20:36,249 | INFO     | pid: 46981
[2025-04-14 08:21:02] 2025-04-14 12:20:36,249 | INFO     | pgrp: 46981
[2025-04-14 08:21:02] 2025-04-14 12:20:36,266 | INFO     | corecount: 8
[2025-04-14 08:21:02] 2025-04-14 12:20:36,266 | INFO     | event service: False
[2025-04-14 08:21:02] 2025-04-14 12:20:36,267 | INFO     | sizes: {0: 2416499, 1: 2417184, 3: 2417184, 4: 2417411, 16: 2417411, 27: 2417439, 39: 2417595, 50: 2417623, 62: 2417651, 74: 2417913, 86: 2417913, 82368: 2474251, 
[2025-04-14 08:21:02] 2025-04-14 12:20:36,267 | INFO     | --------------------------------------------------
[2025-04-14 08:21:02] 2025-04-14 12:20:36,267 | INFO     | 
[2025-04-14 08:21:02] 2025-04-14 12:20:36,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-14 08:21:02] 2025-04-14 12:20:36,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,765 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,765 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-14 08:21:02] 2025-04-14 12:20:36,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-14 08:21:02] 2025-04-14 12:20:36,774 | INFO     | job 6600461296 has completed (purged errors)
[2025-04-14 08:21:02] 2025-04-14 12:20:36,774 | INFO     | overall cleanup function is called
[2025-04-14 08:21:02] 2025-04-14 12:20:37,802 | INFO     | --- collectZombieJob: --- 10, [46981]
[2025-04-14 08:21:02] 2025-04-14 12:20:37,802 | INFO     | zombie collector waiting for pid 46981
[2025-04-14 08:21:02] 2025-04-14 12:20:37,802 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-14 08:21:02] 2025-04-14 12:20:37,803 | INFO     | collected zombie processes
[2025-04-14 08:21:02] 2025-04-14 12:20:37,803 | INFO     | will attempt to kill all subprocesses of pid=46981
[2025-04-14 08:21:02] 2025-04-14 12:20:44,375 | INFO     | PID=13426 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-14 08:21:02] 2025-04-14 12:20:44,376 | INFO     | .. there are 51 such processes running
[2025-04-14 08:21:02] 2025-04-14 12:20:44,378 | INFO     | process IDs to be killed: [46981] (in reverse order)
[2025-04-14 08:21:02] 2025-04-14 12:20:44,564 | WARNING  | found no corresponding commands to process id(s)
[2025-04-14 08:21:02] 2025-04-14 12:20:44,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-14 08:21:02] 2025-04-14 12:20:44,581 | INFO     | did not find any defunct processes belonging to 46981
[2025-04-14 08:21:02] 2025-04-14 12:20:44,597 | INFO     | did not find any defunct processes belonging to 46981
[2025-04-14 08:21:02] 2025-04-14 12:20:44,597 | INFO     | ready for new job
[2025-04-14 08:21:02] 2025-04-14 12:20:44,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-14 08:21:02] 2025-04-14 12:20:44,602 | INFO     | **************************************
[2025-04-14 08:21:02] 2025-04-14 12:20:44,602 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-14 08:21:02] 2025-04-14 12:20:44,602 | INFO     | **************************************
[2025-04-14 08:21:02] 2025-04-14 12:20:44,602 | INFO     | 
[2025-04-14 08:21:02] 2025-04-14 12:20:44,605 | INFO     | architecture information:
[2025-04-14 08:21:02] 2025-04-14 12:20:44,606 | INFO     | executing command: cat /etc/os-release
[2025-04-14 08:21:02] 2025-04-14 12:20:44,748 | INFO     | cat /etc/os-release:
[2025-04-14 08:21:02] NAME="CentOS Linux"
[2025-04-14 08:21:02] VERSION="7 (Core)"
[2025-04-14 08:21:02] ID="centos"
[2025-04-14 08:21:02] ID_LIKE="rhel fedora"
[2025-04-14 08:21:02] VERSION_ID="7"
[2025-04-14 08:21:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-14 08:21:02] ANSI_COLOR="0;31"
[2025-04-14 08:21:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-14 08:21:02] HOME_URL="https://www.centos.org/"
[2025-04-14 08:21:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-14 08:21:02] 
[2025-04-14 08:21:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-14 08:21:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-14 08:21:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-14 08:21:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-14 08:21:02] 
[2025-04-14 08:21:02] 2025-04-14 12:20:44,748 | INFO     | **************************************
[2025-04-14 08:21:02] 2025-04-14 12:20:45,250 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-14 08:21:02] 2025-04-14 12:20:45,536 | INFO     | sufficient remaining disk space (56316919808 B)
[2025-04-14 08:21:02] 2025-04-14 12:20:45,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-14 08:21:02] 2025-04-14 12:20:45,537 | INFO     | current server update state: UPDATING_FINAL
[2025-04-14 08:21:02] 2025-04-14 12:20:45,537 | INFO     | update_server=False
[2025-04-14 08:21:02] 2025-04-14 12:20:45,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-14 08:21:02] 2025-04-14 12:20:45,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-14 08:21:02] 2025-04-14 12:20:45,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-14 08:21:02] 2025-04-14 12:20:45,554 | INFO     | aborting loop
[2025-04-14 08:21:02] 2025-04-14 12:20:45,651 | INFO     | all data control threads have been joined
[2025-04-14 08:21:02] 2025-04-14 12:20:45,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-14 08:21:02] 2025-04-14 12:20:46,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-14 08:21:02] 2025-04-14 12:20:46,387 | INFO     | found 0 job(s) in 20 queues
[2025-04-14 08:21:02] 2025-04-14 12:20:46,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-14 08:21:02] 2025-04-14 12:20:46,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-14 08:21:02] 2025-04-14 12:20:46,543 | INFO     | [job] retrieve thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:46,559 | INFO     | [job] queue monitor thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:46,566 | INFO     | [job] job monitor thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:46,657 | INFO     | [data] control thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:46,766 | INFO     | [payload] validate_post thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:46,880 | INFO     | all payload control threads have been joined
[2025-04-14 08:21:02] 2025-04-14 12:20:47,003 | INFO     | [payload] execute_payloads thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:47,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:47,083 | INFO     | [data] copytool_in thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:47,088 | INFO     | all job control threads have been joined
[2025-04-14 08:21:02] 2025-04-14 12:20:47,431 | INFO     | [payload] validate_pre thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:47,446 | INFO     | [job] validate thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:47,457 | INFO     | [job] create_data_payload thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:47,885 | INFO     | [payload] control thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:48,005 | INFO     | [data] copytool_out thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:48,059 | INFO     | [payload] failed_post thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:48,094 | INFO     | [job] control thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:50,038 | INFO     | [data] queue_monitor thread has finished
[2025-04-14 08:21:02] 2025-04-14 12:20:52,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841004234560)>', '<ExcThread(monitor, started 139839949227776)>']
[2025-04-14 08:21:02] 2025-04-14 12:20:52,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-14 08:21:02] 2025-04-14 12:20:52,449 | INFO     | [monitor] control thread has ended
[2025-04-14 08:21:02] 2025-04-14 12:20:57,041 | INFO     | all workflow threads have been joined
[2025-04-14 08:21:02] 2025-04-14 12:20:57,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-14 08:21:02] 2025-04-14 12:20:57,042 | INFO     | traces error code: 0
[2025-04-14 08:21:02] 2025-04-14 12:20:57,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-14 08:21:02] 2025-04-14 12:20:58,206 [wrapper] ==== pilot stdout END ====
[2025-04-14 08:21:02] 2025-04-14 12:20:58,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-14 08:21:02] 2025-04-14 12:20:58,382 [wrapper] pilotpid: 13426
[2025-04-14 08:21:02] 2025-04-14 12:20:58,436 [wrapper] Pilot exit status: 0
[2025-04-14 08:21:02] 2025-04-14 12:20:58,639 [wrapper] pandaids: 6600461296 6600461296
[2025-04-14 08:21:02] 2025-04-14 12:21:00,086 [wrapper] cleanup supervisor_pilot  6513 13428
[2025-04-14 08:21:02] 2025-04-14 12:21:00,132 [wrapper] Test setup, not cleaning
[2025-04-14 08:21:02] 2025-04-14 12:21:00,305 [wrapper] apfmon messages muted
[2025-04-14 08:21:02] 2025-04-14 12:21:00,423 [wrapper] ==== wrapper stdout END ====
[2025-04-14 08:21:02] 2025-04-14 12:21:00,500 [wrapper] ==== wrapper stderr END ====
[2025-04-14 08:21:02]  *** Error codes and diagnostics ***
[2025-04-14 08:21:02]     "exeErrorCode": 0,
[2025-04-14 08:21:02]     "exeErrorDiag": "",
[2025-04-14 08:21:02]     "pilotErrorCode": 0,
[2025-04-14 08:21:02]     "pilotErrorDiag": "",
[2025-04-14 08:21:02]  *** Listing of results directory ***
[2025-04-14 08:21:02] total 632920
[2025-04-14 08:21:02] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas    495897 Apr 12 11:58 pilot3.tar.gz
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 12:00 queuedata.json
[2025-04-14 08:21:02] -rwx------ 1 boincer umatlas     37140 Apr 12 12:02 runpilot2-wrapper.sh
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas       100 Apr 12 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-14 08:21:02] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 15:49 run_atlas
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas       105 Apr 12 15:49 job.xml
[2025-04-14 08:21:02] -rw-r--r-- 3 boincer umatlas 219197257 Apr 12 15:49 EVNT.44075162._001802.pool.root.1
[2025-04-14 08:21:02] -rw-r--r-- 3 boincer umatlas 219197257 Apr 12 15:49 ATLAS.root_0
[2025-04-14 08:21:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 15:49 start_atlas.sh
[2025-04-14 08:21:02] drwxrwx--x 2 boincer umatlas      4096 Apr 12 15:49 shared
[2025-04-14 08:21:02] -rw-r--r-- 2 boincer umatlas    508886 Apr 12 15:49 input.tar.gz
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas         0 Apr 12 15:49 boinc_lockfile
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas      2550 Apr 13 09:20 pandaJob.out
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas       467 Apr 13 09:21 setup.sh.local
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas    985772 Apr 13 09:23 agis_schedconf.cvmfs.json
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas 193916125 Apr 14 08:14 HITS.44075164._046354.pool.root.1
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas       533 Apr 14 08:15 boinc_task_state.xml
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas      1057 Apr 14 08:18 memory_monitor_summary.json
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas   1603529 Apr 14 08:19 agis_ddmendpoints.agis.ALL.json
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas    890204 Apr 14 08:19 log.44075164._046354.job.log.tgz.1
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas      6136 Apr 14 08:19 init_data.xml
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas        96 Apr 14 08:19 pilot_heartbeat.json
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas      7761 Apr 14 08:20 heartbeat.json
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas      8192 Apr 14 08:20 boinc_mmap_file
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas        30 Apr 14 08:20 wrapper_checkpoint.txt
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas      4353 Apr 14 08:20 pilotlog.txt
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas   5091050 Apr 14 08:21 log.44075164._046354.job.log.1
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas       357 Apr 14 08:21 output.list
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas       620 Apr 14 08:21 runtime_log
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas   6000640 Apr 14 08:21 result.tar.gz
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas     11504 Apr 14 08:21 runtime_log.err
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas       788 Apr 14 08:21 ksJMDm8TsN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmSpRLDmLFAiin.diag
[2025-04-14 08:21:02] -rw-r--r-- 1 boincer umatlas     23136 Apr 14 08:21 stderr.txt
[2025-04-14 08:21:02] HITS file was successfully produced:
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas 193916125 Apr 14 08:14 shared/HITS.pool.root.1
[2025-04-14 08:21:02]  *** Contents of shared directory: ***
[2025-04-14 08:21:02] total 409816
[2025-04-14 08:21:02] -rw-r--r-- 3 boincer umatlas 219197257 Apr 12 15:49 ATLAS.root_0
[2025-04-14 08:21:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 15:49 start_atlas.sh
[2025-04-14 08:21:02] -rw-r--r-- 2 boincer umatlas    508886 Apr 12 15:49 input.tar.gz
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas 193916125 Apr 14 08:14 HITS.pool.root.1
[2025-04-14 08:21:02] -rw------- 1 boincer umatlas   6000640 Apr 14 08:21 result.tar.gz
08:21:04 (34162): run_atlas exited; CPU time 67473.913050
08:21:04 (34162): called boinc_finish(0)

</stderr_txt>
]]>

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