Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:26:17 (2147584): wrapper (7.7.26015): starting
15:26:17 (2147584): wrapper: running run_atlas (--nthreads 12)
[2025-04-13 15:26:17] Arguments: --nthreads 12
[2025-04-13 15:26:17] Threads: 12
[2025-04-13 15:26:17] Checking for CVMFS
[2025-04-13 15:26:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 15:26:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 15:26:17] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 15:26:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 15:26:18] 2.12.7.0 2967247 5688 55356 144816 0 56 2403002 4096001 1824 130560 0 9100981 99.996 1008641 1263 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-13 15:26:18] CVMFS is ok
[2025-04-13 15:26:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 15:26:18] Checking for apptainer binary...
[2025-04-13 15:26:18] apptainer is not installed, using version from CVMFS
[2025-04-13 15:26:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 15:26:18] ryzen4700s
[2025-04-13 15:26:18] apptainer works
[2025-04-13 15:26:18] Set ATHENA_PROC_NUMBER=12
[2025-04-13 15:26:18] Set ATHENA_CORE_NUMBER=12
[2025-04-13 15:26:18] Starting ATLAS job with PandaID=6600395148
[2025-04-13 15:26:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 17:37:50]  *** The last 200 lines of the pilot log: ***
[2025-04-13 17:37:50] 2025-04-13 17:37:34,793 | INFO     | extracted standard info from prmon json
[2025-04-13 17:37:50] 2025-04-13 17:37:34,793 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 17:37:50] 2025-04-13 17:37:34,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 17:37:50] 2025-04-13 17:37:34,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 17:37:50] 2025-04-13 17:37:34,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 17:37:50] 2025-04-13 17:37:34,796 | INFO     | fitting pss+swap vs Time
[2025-04-13 17:37:50] 2025-04-13 17:37:34,796 | INFO     | sum of square deviations: 650246519.9921875
[2025-04-13 17:37:50] 2025-04-13 17:37:34,797 | INFO     | sum of deviations: 48210362492.89844
[2025-04-13 17:37:50] 2025-04-13 17:37:34,797 | INFO     | mean x: 1744561895.5078125
[2025-04-13 17:37:50] 2025-04-13 17:37:34,797 | INFO     | mean y: 2550002.6015625
[2025-04-13 17:37:50] 2025-04-13 17:37:34,797 | INFO     | -- intersect: -129342181246.00267
[2025-04-13 17:37:50] 2025-04-13 17:37:34,797 | INFO     | intersect: -129342181246.00267
[2025-04-13 17:37:50] 2025-04-13 17:37:34,797 | INFO     | chi2: 5.259580671052381
[2025-04-13 17:37:50] 2025-04-13 17:37:34,798 | INFO     | sum of square deviations: 576980334.9918702
[2025-04-13 17:37:50] 2025-04-13 17:37:34,798 | INFO     | sum of deviations: 55256979042.51223
[2025-04-13 17:37:50] 2025-04-13 17:37:34,799 | INFO     | mean x: 1744561743.00813
[2025-04-13 17:37:50] 2025-04-13 17:37:34,799 | INFO     | mean y: 2564057.487804878
[2025-04-13 17:37:50] 2025-04-13 17:37:34,799 | INFO     | -- intersect: -167072821056.1611
[2025-04-13 17:37:50] 2025-04-13 17:37:34,799 | INFO     | intersect: -167072821056.1611
[2025-04-13 17:37:50] 2025-04-13 17:37:34,799 | INFO     | chi2: 4.4704750486958185
[2025-04-13 17:37:50] 2025-04-13 17:37:34,799 | INFO     | current chi2=4.4704750486958185 (change=15.003204090007275 %)
[2025-04-13 17:37:50] 2025-04-13 17:37:34,799 | INFO     | right removable region: 122
[2025-04-13 17:37:50] 2025-04-13 17:37:34,799 | INFO     | sum of square deviations: 576979724.9918702
[2025-04-13 17:37:50] 2025-04-13 17:37:34,800 | INFO     | sum of deviations: 15072965285.975626
[2025-04-13 17:37:50] 2025-04-13 17:37:34,800 | INFO     | mean x: 1744562048.00813
[2025-04-13 17:37:50] 2025-04-13 17:37:34,800 | INFO     | mean y: 2618706.024390244
[2025-04-13 17:37:50] 2025-04-13 17:37:34,800 | INFO     | -- intersect: -45572159834.46523
[2025-04-13 17:37:50] 2025-04-13 17:37:34,800 | INFO     | intersect: -45572159834.46523
[2025-04-13 17:37:50] 2025-04-13 17:37:34,800 | INFO     | chi2: 2.6423190368798
[2025-04-13 17:37:50] 2025-04-13 17:37:34,801 | INFO     | current chi2=2.6423190368798 (change=49.761792771378815 %)
[2025-04-13 17:37:50] 2025-04-13 17:37:34,801 | INFO     | sum of square deviations: 509433967.49152595
[2025-04-13 17:37:50] 2025-04-13 17:37:34,801 | INFO     | sum of deviations: -11448728723.406778
[2025-04-13 17:37:50] 2025-04-13 17:37:34,801 | INFO     | mean x: 1744562200.5084746
[2025-04-13 17:37:50] 2025-04-13 17:37:34,801 | INFO     | mean y: 2678608.406779661
[2025-04-13 17:37:50] 2025-04-13 17:37:34,802 | INFO     | -- intersect: 39208975497.24418
[2025-04-13 17:37:50] 2025-04-13 17:37:34,802 | INFO     | intersect: 39208975497.24418
[2025-04-13 17:37:50] 2025-04-13 17:37:34,802 | INFO     | chi2: 1.0746535819992493
[2025-04-13 17:37:50] 2025-04-13 17:37:34,802 | INFO     | current chi2=1.0746535819992493 (change=59.329151135804516 %)
[2025-04-13 17:37:50] 2025-04-13 17:37:34,802 | INFO     | sum of square deviations: 447376684.9911509
[2025-04-13 17:37:50] 2025-04-13 17:37:34,803 | INFO     | sum of deviations: -18298986229.778763
[2025-04-13 17:37:50] 2025-04-13 17:37:34,803 | INFO     | mean x: 1744562353.0088496
[2025-04-13 17:37:50] 2025-04-13 17:37:34,803 | INFO     | mean y: 2695162.778761062
[2025-04-13 17:37:50] 2025-04-13 17:37:34,803 | INFO     | -- intersect: 71360286082.67845
[2025-04-13 17:37:50] 2025-04-13 17:37:34,803 | INFO     | intersect: 71360286082.67845
[2025-04-13 17:37:50] 2025-04-13 17:37:34,803 | INFO     | chi2: 0.8857930272669603
[2025-04-13 17:37:50] 2025-04-13 17:37:34,803 | INFO     | current chi2=0.8857930272669603 (change=17.57408693329242 %)
[2025-04-13 17:37:50] 2025-04-13 17:37:34,803 | INFO     | left removable region: 30
[2025-04-13 17:37:50] 2025-04-13 17:37:34,804 | INFO     | sum of square deviations: 241429643.0
[2025-04-13 17:37:50] 2025-04-13 17:37:34,804 | INFO     | sum of deviations: -3129339772.0
[2025-04-13 17:37:50] 2025-04-13 17:37:34,804 | INFO     | mean x: 1744562627.5
[2025-04-13 17:37:50] 2025-04-13 17:37:34,804 | INFO     | mean y: 2696797.934782609
[2025-04-13 17:37:50] 2025-04-13 17:37:34,804 | INFO     | -- intersect: 22615202649.093132
[2025-04-13 17:37:50] 2025-04-13 17:37:34,804 | INFO     | intersect: 22615202649.093132
[2025-04-13 17:37:50] 2025-04-13 17:37:34,804 | INFO     | chi2: 0.027068553502475952
[2025-04-13 17:37:50] 2025-04-13 17:37:34,805 | INFO     | -- intersect: 22615202649.093132
[2025-04-13 17:37:50] 2025-04-13 17:37:34,805 | INFO     | current memory leak: -12.96 B/s (using 92 data points, chi2=0.03)
[2025-04-13 17:37:50] 2025-04-13 17:37:34,805 | INFO     | ..............................
[2025-04-13 17:37:50] 2025-04-13 17:37:34,805 | INFO     | . Timing measurements:
[2025-04-13 17:37:50] 2025-04-13 17:37:34,805 | INFO     | . get job = 0 s
[2025-04-13 17:37:50] 2025-04-13 17:37:34,806 | INFO     | . initial setup = 2 s
[2025-04-13 17:37:50] 2025-04-13 17:37:34,806 | INFO     | . payload setup = 6 s
[2025-04-13 17:37:50] 2025-04-13 17:37:34,806 | INFO     | . stage-in = 0 s
[2025-04-13 17:37:50] 2025-04-13 17:37:34,806 | INFO     | . payload execution = 7794 s
[2025-04-13 17:37:50] 2025-04-13 17:37:34,806 | INFO     | . stage-out = 2 s
[2025-04-13 17:37:50] 2025-04-13 17:37:34,806 | INFO     | . log creation = 0 s
[2025-04-13 17:37:50] 2025-04-13 17:37:34,806 | INFO     | ..............................
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | 
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | job summary report
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | --------------------------------------------------
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | PanDA job id: 6600395148
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | task id: 44075164
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | errors: (none)
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | pilot state: finished 
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | transexitcode: 0
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | exeerrorcode: 0
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | exeerrordiag: 
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | exitcode: 0
[2025-04-13 17:37:50] 2025-04-13 17:37:34,881 | INFO     | exitmsg: OK
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | cpuconsumptiontime: 37728 s
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | nevents: 400
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | neventsw: 0
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | pid: 2157812
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | pgrp: 2157812
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | corecount: 12
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | event service: False
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | sizes: {0: 2417299, 6: 2417505, 11: 2417533, 7805: 2444969, 7808: 2453956, 7809: 2454012, 7847: 2454310}
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | --------------------------------------------------
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | 
[2025-04-13 17:37:50] 2025-04-13 17:37:34,882 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-04-13 17:37:50] 2025-04-13 17:37:34,976 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,976 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,976 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,976 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 17:37:50] 2025-04-13 17:37:34,978 | INFO     | job 6600395148 has completed (purged errors)
[2025-04-13 17:37:50] 2025-04-13 17:37:34,978 | INFO     | overall cleanup function is called
[2025-04-13 17:37:50] 2025-04-13 17:37:35,993 | INFO     | --- collectZombieJob: --- 10, [2157812]
[2025-04-13 17:37:50] 2025-04-13 17:37:35,993 | INFO     | zombie collector waiting for pid 2157812
[2025-04-13 17:37:50] 2025-04-13 17:37:35,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 17:37:50] 2025-04-13 17:37:35,993 | INFO     | collected zombie processes
[2025-04-13 17:37:50] 2025-04-13 17:37:35,993 | INFO     | will attempt to kill all subprocesses of pid=2157812
[2025-04-13 17:37:50] 2025-04-13 17:37:36,099 | INFO     | process IDs to be killed: [2157812] (in reverse order)
[2025-04-13 17:37:50] 2025-04-13 17:37:36,346 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 17:37:50] 2025-04-13 17:37:36,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 17:37:50] 2025-04-13 17:37:36,350 | INFO     | did not find any defunct processes belonging to 2157812
[2025-04-13 17:37:50] 2025-04-13 17:37:36,353 | INFO     | did not find any defunct processes belonging to 2157812
[2025-04-13 17:37:50] 2025-04-13 17:37:36,353 | INFO     | ready for new job
[2025-04-13 17:37:50] 2025-04-13 17:37:36,353 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 17:37:50] 2025-04-13 17:37:36,355 | INFO     | **************************************
[2025-04-13 17:37:50] 2025-04-13 17:37:36,355 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 17:37:50] 2025-04-13 17:37:36,355 | INFO     | **************************************
[2025-04-13 17:37:50] 2025-04-13 17:37:36,355 | INFO     | 
[2025-04-13 17:37:50] 2025-04-13 17:37:36,375 | INFO     | architecture information:
[2025-04-13 17:37:50] 2025-04-13 17:37:36,376 | INFO     | executing command: cat /etc/os-release
[2025-04-13 17:37:50] 2025-04-13 17:37:36,394 | INFO     | cat /etc/os-release:
[2025-04-13 17:37:50] NAME="CentOS Linux"
[2025-04-13 17:37:50] VERSION="7 (Core)"
[2025-04-13 17:37:50] ID="centos"
[2025-04-13 17:37:50] ID_LIKE="rhel fedora"
[2025-04-13 17:37:50] VERSION_ID="7"
[2025-04-13 17:37:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 17:37:50] ANSI_COLOR="0;31"
[2025-04-13 17:37:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 17:37:50] HOME_URL="https://www.centos.org/"
[2025-04-13 17:37:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 17:37:50] 
[2025-04-13 17:37:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 17:37:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 17:37:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 17:37:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 17:37:50] 
[2025-04-13 17:37:50] 2025-04-13 17:37:36,395 | INFO     | **************************************
[2025-04-13 17:37:50] 2025-04-13 17:37:36,898 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-04-13 17:37:50] 2025-04-13 17:37:36,922 | INFO     | sufficient remaining disk space (115496452096 B)
[2025-04-13 17:37:50] 2025-04-13 17:37:36,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 17:37:50] 2025-04-13 17:37:36,923 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 17:37:50] 2025-04-13 17:37:36,923 | INFO     | update_server=False
[2025-04-13 17:37:50] 2025-04-13 17:37:36,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 17:37:50] 2025-04-13 17:37:36,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 17:37:50] 2025-04-13 17:37:37,158 | INFO     | all job control threads have been joined
[2025-04-13 17:37:50] 2025-04-13 17:37:37,202 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-13 17:37:50] 2025-04-13 17:37:37,202 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-13 17:37:50] 2025-04-13 17:37:37,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 17:37:50] 2025-04-13 17:37:37,203 | INFO     | will abort loop
[2025-04-13 17:37:50] 2025-04-13 17:37:37,566 | INFO     | all payload control threads have been joined
[2025-04-13 17:37:50] 2025-04-13 17:37:37,846 | INFO     | all data control threads have been joined
[2025-04-13 17:37:50] 2025-04-13 17:37:37,890 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 17:37:50] 2025-04-13 17:37:37,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 17:37:50] 2025-04-13 17:37:37,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 17:37:50] 2025-04-13 17:37:37,926 | INFO     | [job] retrieve thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:37,934 | INFO     | [job] validate thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,082 | INFO     | [payload] validate_post thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,164 | INFO     | [job] control thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,209 | INFO     | [job] job monitor thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,410 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,570 | INFO     | [payload] control thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,742 | INFO     | [payload] failed_post thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,851 | INFO     | [data] control thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:38,926 | INFO     | [data] copytool_out thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:39,010 | INFO     | [data] copytool_in thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:39,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 17:37:50] 2025-04-13 17:37:39,105 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:39,322 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:39,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 17:37:50] 2025-04-13 17:37:40,895 | INFO     | [job] queue monitor thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:43,046 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 17:37:50] 2025-04-13 17:37:44,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477287135040)>', '<ExcThread(monitor, started 140476636198656)>']
[2025-04-13 17:37:50] 2025-04-13 17:37:44,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 17:37:50] 2025-04-13 17:37:44,918 | INFO     | [monitor] control thread has ended
[2025-04-13 17:37:50] 2025-04-13 17:37:49,842 | INFO     | all workflow threads have been joined
[2025-04-13 17:37:50] 2025-04-13 17:37:49,842 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 17:37:50] 2025-04-13 17:37:49,843 | INFO     | traces error code: 0
[2025-04-13 17:37:50] 2025-04-13 17:37:49,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 17:37:50] 2025-04-13 17:37:49,992 [wrapper] ==== pilot stdout END ====
[2025-04-13 17:37:50] 2025-04-13 17:37:49,999 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 17:37:50] 2025-04-13 17:37:50,005 [wrapper] pilotpid: 2151267
[2025-04-13 17:37:50] 2025-04-13 17:37:50,008 [wrapper] Pilot exit status: 0
[2025-04-13 17:37:50] 2025-04-13 17:37:50,028 [wrapper] pandaids: 6600395148
[2025-04-13 17:37:50] 2025-04-13 17:37:50,054 [wrapper] cleanup supervisor_pilot 2221316 2151268
[2025-04-13 17:37:50] 2025-04-13 17:37:50,057 [wrapper] Test setup, not cleaning
[2025-04-13 17:37:50] 2025-04-13 17:37:50,060 [wrapper] apfmon messages muted
[2025-04-13 17:37:50] 2025-04-13 17:37:50,063 [wrapper] ==== wrapper stdout END ====
[2025-04-13 17:37:50] 2025-04-13 17:37:50,066 [wrapper] ==== wrapper stderr END ====
[2025-04-13 17:37:50]  *** Error codes and diagnostics ***
[2025-04-13 17:37:50]     "exeErrorCode": 0,
[2025-04-13 17:37:50]     "exeErrorDiag": "",
[2025-04-13 17:37:50]     "pilotErrorCode": 0,
[2025-04-13 17:37:50]     "pilotErrorDiag": "",
[2025-04-13 17:37:50]  *** Listing of results directory ***
[2025-04-13 17:37:50] total 419276
[2025-04-13 17:37:50] -rw-r--r-- 1 boinc boinc    495897 Apr 12 06:19 pilot3.tar.gz
[2025-04-13 17:37:50] -rwx------ 1 boinc boinc     37140 Apr 12 06:31 runpilot2-wrapper.sh
[2025-04-13 17:37:50] -rw-r--r-- 1 boinc boinc      5111 Apr 12 06:31 queuedata.json
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc       100 Apr 13 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 17:37:50] -rwxr-xr-x 1 boinc boinc      7986 Apr 13 15:26 run_atlas
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc       105 Apr 13 15:26 job.xml
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc      9438 Apr 13 15:26 init_data.xml
[2025-04-13 17:37:50] -rw-r--r-- 2 boinc boinc 224000766 Apr 13 15:26 EVNT.44075162._001574.pool.root.1
[2025-04-13 17:37:50] drwxrwx--x 2 boinc boinc      4096 Apr 13 15:26 shared
[2025-04-13 17:37:50] -rw-r--r-- 2 boinc boinc    508880 Apr 13 15:26 input.tar.gz
[2025-04-13 17:37:50] -rw-r--r-- 2 boinc boinc     17569 Apr 13 15:26 start_atlas.sh
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc         0 Apr 13 15:26 boinc_lockfile
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc      2549 Apr 13 15:26 pandaJob.out
[2025-04-13 17:37:50] -rw------- 1 boinc boinc       424 Apr 13 15:26 setup.sh.local
[2025-04-13 17:37:50] -rw------- 1 boinc boinc    985764 Apr 13 15:26 agis_schedconf.cvmfs.json
[2025-04-13 17:37:50] -rw------- 1 boinc boinc   1603529 Apr 13 15:26 agis_ddmendpoints.agis.ALL.json
[2025-04-13 17:37:50] drwx------ 4 boinc boinc      4096 Apr 13 15:26 pilot3
[2025-04-13 17:37:50] -rw------- 1 boinc boinc 199170698 Apr 13 17:35 HITS.44075164._040646.pool.root.1
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc       529 Apr 13 17:36 boinc_task_state.xml
[2025-04-13 17:37:50] -rw------- 1 boinc boinc      1020 Apr 13 17:36 memory_monitor_summary.json
[2025-04-13 17:37:50] -rw------- 1 boinc boinc    397145 Apr 13 17:36 log.44075164._040646.job.log.tgz.1
[2025-04-13 17:37:50] -rw------- 1 boinc boinc        95 Apr 13 17:37 pilot_heartbeat.json
[2025-04-13 17:37:50] -rw------- 1 boinc boinc      7668 Apr 13 17:37 heartbeat.json
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc        27 Apr 13 17:37 wrapper_checkpoint.txt
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc      8192 Apr 13 17:37 boinc_mmap_file
[2025-04-13 17:37:50] -rw------- 1 boinc boinc      4563 Apr 13 17:37 pilotlog.txt
[2025-04-13 17:37:50] -rw------- 1 boinc boinc    762303 Apr 13 17:37 log.44075164._040646.job.log.1
[2025-04-13 17:37:50] -rw------- 1 boinc boinc       357 Apr 13 17:37 output.list
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc       620 Apr 13 17:37 runtime_log
[2025-04-13 17:37:50] -rw------- 1 boinc boinc   1177600 Apr 13 17:37 result.tar.gz
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc     11419 Apr 13 17:37 runtime_log.err
[2025-04-13 17:37:50] -rw------- 1 boinc boinc       654 Apr 13 17:37 1IuMDm4ZjN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm14xKDmCsvFLm.diag
[2025-04-13 17:37:50] -rw-rw-r-- 1 boinc boinc     20600 Apr 13 17:37 stderr.txt
[2025-04-13 17:37:50] HITS file was successfully produced:
[2025-04-13 17:37:50] -rw------- 1 boinc boinc 199170698 Apr 13 17:35 shared/HITS.pool.root.1
[2025-04-13 17:37:50]  *** Contents of shared directory: ***
[2025-04-13 17:37:50] total 414936
[2025-04-13 17:37:50] -rw-r--r-- 2 boinc boinc 224000766 Apr 13 15:26 ATLAS.root_0
[2025-04-13 17:37:50] -rw-r--r-- 2 boinc boinc    508880 Apr 13 15:26 input.tar.gz
[2025-04-13 17:37:50] -rw-r--r-- 2 boinc boinc     17569 Apr 13 15:26 start_atlas.sh
[2025-04-13 17:37:50] -rw------- 1 boinc boinc 199170698 Apr 13 17:35 HITS.pool.root.1
[2025-04-13 17:37:50] -rw------- 1 boinc boinc   1177600 Apr 13 17:37 result.tar.gz
17:37:52 (2147584): run_atlas exited; CPU time 37766.938101
17:37:52 (2147584): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN