Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:25:14 (539701): wrapper (7.7.26015): starting
22:25:14 (539701): wrapper: running run_atlas (--nthreads 4)
[2025-04-12 22:25:14] Arguments: --nthreads 4
[2025-04-12 22:25:14] Threads: 4
[2025-04-12 22:25:14] Checking for CVMFS
[2025-04-12 22:25:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 22:25:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 22:25:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 22:25:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 22:25:14] 2.12.7.0 18817 403 47816 144788 2 56 3212310 6144001 2695 130560 1 1343357 99.998 131177 526 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-12 22:25:14] CVMFS is ok
[2025-04-12 22:25:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 22:25:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-12 22:25:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-12 22:25:14] Further information can be found at the LHC@home message board.
[2025-04-12 22:25:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 22:25:14] Checking for apptainer binary...
[2025-04-12 22:25:14] apptainer is not installed, using version from CVMFS
[2025-04-12 22:25:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 22:25:14] mini2
[2025-04-12 22:25:14] apptainer works
[2025-04-12 22:25:14] Set ATHENA_PROC_NUMBER=4
[2025-04-12 22:25:14] Set ATHENA_CORE_NUMBER=4
[2025-04-12 22:25:14] Starting ATLAS job with PandaID=6600441908
[2025-04-12 22:25:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 23:33:24]  *** The last 200 lines of the pilot log: ***
[2025-04-12 23:33:24]  filetype=log
[2025-04-12 23:33:24]  guid=226ca169-d743-4f93-a3a2-3fc1d46a68aa
[2025-04-12 23:33:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-12 23:33:24]  is_altstaged=None
[2025-04-12 23:33:24]  is_tar=False
[2025-04-12 23:33:24]  lfn=log.44075164._044873.job.log.tgz.1
[2025-04-12 23:33:24]  mtime=0
[2025-04-12 23:33:24]  protocol_id=None
[2025-04-12 23:33:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-12 23:33:24]  replicas=None
[2025-04-12 23:33:24]  scope=mc23_13p6TeV
[2025-04-12 23:33:24]  status=None
[2025-04-12 23:33:24]  status_code=0
[2025-04-12 23:33:24]  storage_token=
[2025-04-12 23:33:24]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6600441908/log.44075164._044873.job.log.tgz.1
[2025-04-12 23:33:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/56/log.44075164._044873.job.log.tgz.1
[2025-04-12 23:33:24]  workdir=None
[2025-04-12 23:33:24] ]
[2025-04-12 23:33:24] 2025-04-12 22:33:00,880 | INFO     | transferring file log.44075164._044873.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6600441908/log.44075164._044873.job.log.tgz.1 to /var/lib/boinc
[2025-04-12 23:33:24] 2025-04-12 22:33:00,880 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6600441908/log.44075164._044873.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.440751
[2025-04-12 23:33:24] 2025-04-12 22:33:00,886 | INFO     | adding to output.list: log.44075164._044873.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/56/log.44075164._044873.job.log.tg
[2025-04-12 23:33:24] 2025-04-12 22:33:00,887 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-12 23:33:24] 2025-04-12 22:33:00,887 | INFO     | summary of transferred files:
[2025-04-12 23:33:24] 2025-04-12 22:33:00,887 | INFO     |  -- lfn=log.44075164._044873.job.log.tgz.1, status_code=0, status=transferred
[2025-04-12 23:33:24] 2025-04-12 22:33:00,887 | INFO     | stage-out finished correctly
[2025-04-12 23:33:24] 2025-04-12 22:33:02,570 | WARNING  | process 550156 can no longer be monitored (due to stat problems) - aborting
[2025-04-12 23:33:24] 2025-04-12 22:33:02,570 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6600441908/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 23:33:24] 2025-04-12 22:33:02,596 | INFO     | number of running child processes to parent process 550156: 1
[2025-04-12 23:33:24] 2025-04-12 22:33:02,596 | INFO     | maximum number of monitored processes: 6
[2025-04-12 23:33:24] 2025-04-12 22:33:03,793 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-12 23:33:24] 2025-04-12 22:33:03,818 | INFO     | job 6600441908 has state=finished
[2025-04-12 23:33:24] 2025-04-12 22:33:03,818 | INFO     | preparing for final server update for job 6600441908 in state='finished'
[2025-04-12 23:33:24] 2025-04-12 22:33:03,819 | INFO     | this job has now completed (state=finished)
[2025-04-12 23:33:24] 2025-04-12 22:33:03,819 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-12 23:33:24] 2025-04-12 22:33:03,819 | INFO     | log transfer has been attempted: DONE
[2025-04-12 23:33:24] 2025-04-12 22:33:03,819 | INFO     | job 6600441908 has finished - writing final server update
[2025-04-12 23:33:24] 2025-04-12 22:33:03,819 | INFO     | total number of processed events: 400 (read)
[2025-04-12 23:33:24] 2025-04-12 22:33:03,820 | INFO     | executing command: lscpu
[2025-04-12 23:33:24] 2025-04-12 22:33:03,831 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-12 23:33:24] 2025-04-12 22:33:04,946 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-12 23:33:24] 2025-04-12 22:33:04,946 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6600441908/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 23:33:24] 2025-04-12 22:33:04,947 | INFO     | extracted standard info from prmon json
[2025-04-12 23:33:24] 2025-04-12 22:33:04,947 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 23:33:24] 2025-04-12 22:33:04,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 23:33:24] 2025-04-12 22:33:04,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 23:33:24] 2025-04-12 22:33:04,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 23:33:24] 2025-04-12 22:33:04,947 | INFO     | fitting pss+swap vs Time
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | sum of square deviations: 66959395.0
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | sum of deviations: 9381254629.5
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | mean x: 1744495241.5
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | mean y: 2277630.4166666665
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | -- intersect: -244407846751.12228
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | intersect: -244407846751.12228
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | chi2: 1.4975435558265016
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | -- intersect: -244407846751.12228
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | current memory leak: 140.10 B/s (using 60 data points, chi2=1.50)
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | ..............................
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | . Timing measurements:
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | . get job = 0 s
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | . initial setup = 1 s
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | . payload setup = 3 s
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | . stage-in = 0 s
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | . payload execution = 4042 s
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | . stage-out = 0 s
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | . log creation = 0 s
[2025-04-12 23:33:24] 2025-04-12 22:33:04,948 | INFO     | ..............................
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | 
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | job summary report
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | --------------------------------------------------
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | PanDA job id: 6600441908
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | task id: 44075164
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | errors: (none)
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | pilot state: finished 
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | transexitcode: 0
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | exeerrorcode: 0
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | exeerrordiag: 
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | exitcode: 0
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | exitmsg: OK
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | cpuconsumptiontime: 13502 s
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | nevents: 400
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | neventsw: 0
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | pid: 550156
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | pgrp: 550156
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | corecount: 4
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | event service: False
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | sizes: {0: 2417334, 1: 2417540, 11: 2417568, 4048: 2443453, 4049: 2452408, 4052: 2452464, 4053: 2452762}
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | --------------------------------------------------
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | 
[2025-04-12 23:33:24] 2025-04-12 22:33:04,976 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-04-12 23:33:24] 2025-04-12 22:33:04,984 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,984 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | job 6600441908 has completed (purged errors)
[2025-04-12 23:33:24] 2025-04-12 22:33:04,985 | INFO     | overall cleanup function is called
[2025-04-12 23:33:24] 2025-04-12 22:33:05,991 | INFO     | --- collectZombieJob: --- 10, [550156]
[2025-04-12 23:33:24] 2025-04-12 22:33:05,991 | INFO     | zombie collector waiting for pid 550156
[2025-04-12 23:33:24] 2025-04-12 22:33:05,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 23:33:24] 2025-04-12 22:33:05,991 | INFO     | collected zombie processes
[2025-04-12 23:33:24] 2025-04-12 22:33:05,991 | INFO     | will attempt to kill all subprocesses of pid=550156
[2025-04-12 23:33:24] 2025-04-12 22:33:06,018 | INFO     | process IDs to be killed: [550156] (in reverse order)
[2025-04-12 23:33:24] 2025-04-12 22:33:06,037 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 23:33:24] 2025-04-12 22:33:06,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 23:33:24] 2025-04-12 22:33:06,038 | INFO     | did not find any defunct processes belonging to 550156
[2025-04-12 23:33:24] 2025-04-12 22:33:06,038 | INFO     | did not find any defunct processes belonging to 550156
[2025-04-12 23:33:24] 2025-04-12 22:33:06,039 | INFO     | ready for new job
[2025-04-12 23:33:24] 2025-04-12 22:33:06,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 23:33:24] 2025-04-12 22:33:06,039 | INFO     | **************************************
[2025-04-12 23:33:24] 2025-04-12 22:33:06,039 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 23:33:24] 2025-04-12 22:33:06,039 | INFO     | **************************************
[2025-04-12 23:33:24] 2025-04-12 22:33:06,039 | INFO     | 
[2025-04-12 23:33:24] 2025-04-12 22:33:06,040 | INFO     | architecture information:
[2025-04-12 23:33:24] 2025-04-12 22:33:06,040 | INFO     | executing command: cat /etc/os-release
[2025-04-12 23:33:24] 2025-04-12 22:33:06,045 | INFO     | cat /etc/os-release:
[2025-04-12 23:33:24] NAME="CentOS Linux"
[2025-04-12 23:33:24] VERSION="7 (Core)"
[2025-04-12 23:33:24] ID="centos"
[2025-04-12 23:33:24] ID_LIKE="rhel fedora"
[2025-04-12 23:33:24] VERSION_ID="7"
[2025-04-12 23:33:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 23:33:24] ANSI_COLOR="0;31"
[2025-04-12 23:33:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 23:33:24] HOME_URL="https://www.centos.org/"
[2025-04-12 23:33:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 23:33:24] 
[2025-04-12 23:33:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 23:33:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 23:33:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 23:33:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 23:33:24] 
[2025-04-12 23:33:24] 2025-04-12 22:33:06,045 | INFO     | **************************************
[2025-04-12 23:33:24] 2025-04-12 22:33:06,548 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | INFO     | sufficient remaining disk space (387210805248 B)
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | INFO     | update_server=False
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | INFO     | aborting loop
[2025-04-12 23:33:24] 2025-04-12 22:33:06,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 23:33:24] 2025-04-12 22:33:06,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 23:33:24] 2025-04-12 22:33:06,647 | INFO     | all data control threads have been joined
[2025-04-12 23:33:24] 2025-04-12 22:33:07,385 | INFO     | all payload control threads have been joined
[2025-04-12 23:33:24] 2025-04-12 22:33:07,560 | INFO     | [job] retrieve thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:07,560 | INFO     | [job] queue monitor thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:07,561 | INFO     | [job] job monitor thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:07,627 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:07,652 | INFO     | [data] control thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:07,700 | INFO     | [payload] failed_post thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:07,742 | INFO     | all job control threads have been joined
[2025-04-12 23:33:24] 2025-04-12 22:33:08,052 | INFO     | [payload] validate_post thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:08,301 | INFO     | [data] copytool_in thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:08,390 | INFO     | [payload] control thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:08,561 | INFO     | [data] copytool_out thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:08,659 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:08,660 | INFO     | [job] validate thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:08,747 | INFO     | [job] control thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:08,794 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:09,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 23:33:24] 2025-04-12 22:33:13,829 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:16,985 | INFO     | job.realtimelogging is not enabled
[2025-04-12 23:33:24] 2025-04-12 22:33:17,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 23:33:24] 2025-04-12 22:33:19,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128695111546688)>', '<ExcThread(monitor, started 128694752352000)>']
[2025-04-12 23:33:24] 2025-04-12 22:33:20,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 23:33:24] 2025-04-12 22:33:20,619 | INFO     | [monitor] control thread has ended
[2025-04-12 23:33:24] 2025-04-12 22:33:24,890 | INFO     | all workflow threads have been joined
[2025-04-12 23:33:24] 2025-04-12 22:33:24,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 23:33:24] 2025-04-12 22:33:24,890 | INFO     | traces error code: 0
[2025-04-12 23:33:24] 2025-04-12 22:33:24,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 23:33:24] 2025-04-12 22:33:24,926 [wrapper] ==== pilot stdout END ====
[2025-04-12 23:33:24] 2025-04-12 22:33:24,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 23:33:24] 2025-04-12 22:33:24,928 [wrapper] pilotpid: 543472
[2025-04-12 23:33:24] 2025-04-12 22:33:24,929 [wrapper] Pilot exit status: 0
[2025-04-12 23:33:24] 2025-04-12 22:33:24,932 [wrapper] pandaids: 6600441908
[2025-04-12 23:33:24] 2025-04-12 22:33:24,940 [wrapper] cleanup supervisor_pilot  609349 543473
[2025-04-12 23:33:24] 2025-04-12 22:33:24,941 [wrapper] Test setup, not cleaning
[2025-04-12 23:33:24] 2025-04-12 22:33:24,942 [wrapper] apfmon messages muted
[2025-04-12 23:33:24] 2025-04-12 22:33:24,943 [wrapper] ==== wrapper stdout END ====
[2025-04-12 23:33:24] 2025-04-12 22:33:24,944 [wrapper] ==== wrapper stderr END ====
[2025-04-12 23:33:24]  *** Error codes and diagnostics ***
[2025-04-12 23:33:24]     "exeErrorCode": 0,
[2025-04-12 23:33:24]     "exeErrorDiag": "",
[2025-04-12 23:33:24]     "pilotErrorCode": 0,
[2025-04-12 23:33:24]     "pilotErrorDiag": "",
[2025-04-12 23:33:24]  *** Listing of results directory ***
[2025-04-12 23:33:24] total 413888
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc    495897 Apr 12 13:54 pilot3.tar.gz
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc      5111 Apr 12 14:21 queuedata.json
[2025-04-12 23:33:24] -rwx------ 1 boinc boinc     37140 Apr 12 14:22 runpilot2-wrapper.sh
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc       100 Apr 12 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 23:33:24] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 22:25 run_atlas
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc       105 Apr 12 22:25 job.xml
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc      7153 Apr 12 22:25 init_data.xml
[2025-04-12 23:33:24] -rw-r--r-- 2 boinc boinc 222659626 Apr 12 22:25 EVNT.44075162._001743.pool.root.1
[2025-04-12 23:33:24] -rw-r--r-- 2 boinc boinc     17569 Apr 12 22:25 start_atlas.sh
[2025-04-12 23:33:24] drwxrwx--x 2 boinc boinc      4096 Apr 12 22:25 shared
[2025-04-12 23:33:24] -rw-r--r-- 2 boinc boinc    508882 Apr 12 22:25 input.tar.gz
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc         0 Apr 12 22:25 boinc_lockfile
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc      2550 Apr 12 22:25 pandaJob.out
[2025-04-12 23:33:24] -rw------- 1 boinc boinc       424 Apr 12 22:25 setup.sh.local
[2025-04-12 23:33:24] -rw------- 1 boinc boinc    985800 Apr 12 22:25 agis_schedconf.cvmfs.json
[2025-04-12 23:33:24] -rw------- 1 boinc boinc   1603529 Apr 12 22:25 agis_ddmendpoints.agis.ALL.json
[2025-04-12 23:33:24] drwx------ 4 boinc boinc      4096 Apr 12 22:25 pilot3
[2025-04-12 23:33:24] -rw------- 1 boinc boinc        95 Apr 12 23:32 pilot_heartbeat.json
[2025-04-12 23:33:24] -rw------- 1 boinc boinc 196002213 Apr 12 23:32 HITS.44075164._044873.pool.root.1
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc       529 Apr 12 23:32 boinc_task_state.xml
[2025-04-12 23:33:24] -rw------- 1 boinc boinc      1041 Apr 12 23:32 memory_monitor_summary.json
[2025-04-12 23:33:24] -rw------- 1 boinc boinc    233625 Apr 12 23:33 log.44075164._044873.job.log.tgz.1
[2025-04-12 23:33:24] -rw------- 1 boinc boinc      7660 Apr 12 23:33 heartbeat.json
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc      8192 Apr 12 23:33 boinc_mmap_file
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc        27 Apr 12 23:33 wrapper_checkpoint.txt
[2025-04-12 23:33:24] -rw------- 1 boinc boinc      4556 Apr 12 23:33 pilotlog.txt
[2025-04-12 23:33:24] -rw------- 1 boinc boinc    420495 Apr 12 23:33 log.44075164._044873.job.log.1
[2025-04-12 23:33:24] -rw------- 1 boinc boinc       357 Apr 12 23:33 output.list
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc       620 Apr 12 23:33 runtime_log
[2025-04-12 23:33:24] -rw------- 1 boinc boinc    675840 Apr 12 23:33 result.tar.gz
[2025-04-12 23:33:24] -rw------- 1 boinc boinc       644 Apr 12 23:33 Y6cNDmIzpN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMYRLDmmkFaGm.diag
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc     11107 Apr 12 23:33 runtime_log.err
[2025-04-12 23:33:24] -rw-r--r-- 1 boinc boinc     21311 Apr 12 23:33 stderr.txt
[2025-04-12 23:33:24] HITS file was successfully produced:
[2025-04-12 23:33:24] -rw------- 1 boinc boinc 196002213 Apr 12 23:32 shared/HITS.pool.root.1
[2025-04-12 23:33:24]  *** Contents of shared directory: ***
[2025-04-12 23:33:24] total 410044
[2025-04-12 23:33:24] -rw-r--r-- 2 boinc boinc 222659626 Apr 12 22:25 ATLAS.root_0
[2025-04-12 23:33:24] -rw-r--r-- 2 boinc boinc     17569 Apr 12 22:25 start_atlas.sh
[2025-04-12 23:33:24] -rw-r--r-- 2 boinc boinc    508882 Apr 12 22:25 input.tar.gz
[2025-04-12 23:33:24] -rw------- 1 boinc boinc 196002213 Apr 12 23:32 HITS.pool.root.1
[2025-04-12 23:33:24] -rw------- 1 boinc boinc    675840 Apr 12 23:33 result.tar.gz
23:33:26 (539701): run_atlas exited; CPU time 13525.780054
23:33:26 (539701): called boinc_finish(0)

</stderr_txt>
]]>

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