Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:36:46 (32594): wrapper (7.7.26015): starting
12:36:46 (32594): wrapper: running run_atlas (--nthreads 10)
[2025-04-12 12:36:46] Arguments: --nthreads 10
[2025-04-12 12:36:46] Threads: 10
[2025-04-12 12:36:46] Checking for CVMFS
[2025-04-12 12:36:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 12:36:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 12:36:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 12:36:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 12:36:49] 2.11.2.0 26642 32825 240740 144776 3 975 14974930 18432001 18454 130560 0 136483514 98.990 323166831 36660 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 12:36:49] CVMFS is ok
[2025-04-12 12:36:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 12:36:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 12:36:49] Further information can be found at the LHC@home message board.
[2025-04-12 12:36:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 12:36:49] Checking for apptainer binary...
[2025-04-12 12:36:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 12:36:49] Running /usr/bin/apptainer --version
[2025-04-12 12:36:50] apptainer version 1.3.2-1.el7
[2025-04-12 12:36:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 12:37:03] c-210-21.aglt2.org
[2025-04-12 12:37:03] apptainer works
[2025-04-12 12:37:03] Set ATHENA_PROC_NUMBER=10
[2025-04-12 12:37:03] Set ATHENA_CORE_NUMBER=10
[2025-04-12 12:37:04] Starting ATLAS job with PandaID=6600415808
[2025-04-12 12:37:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 09:06:56]  *** The last 200 lines of the pilot log: ***
[2025-04-13 09:06:56] 2025-04-13 13:06:37,544 | INFO     | mean x: 1744513051.778428
[2025-04-13 09:06:56] 2025-04-13 13:06:37,544 | INFO     | mean y: 2534266.4857859532
[2025-04-13 09:06:56] 2025-04-13 13:06:37,544 | INFO     | -- intersect: -5581361492.328756
[2025-04-13 09:06:56] 2025-04-13 13:06:37,545 | INFO     | intersect: -5581361492.328756
[2025-04-13 09:06:56] 2025-04-13 13:06:37,546 | INFO     | chi2: 9.349833004916489
[2025-04-13 09:06:56] 2025-04-13 13:06:37,547 | INFO     | current chi2=9.349833004916489 (change=33.461374491226046 %)
[2025-04-13 09:06:56] 2025-04-13 13:06:37,551 | INFO     | sum of square deviations: 523852655122.0771
[2025-04-13 09:06:56] 2025-04-13 13:06:37,605 | INFO     | sum of deviations: 1333225903591.037
[2025-04-13 09:06:56] 2025-04-13 13:06:37,605 | INFO     | mean x: 1744513204.283795
[2025-04-13 09:06:56] 2025-04-13 13:06:37,606 | INFO     | mean y: 2542660.32829555
[2025-04-13 09:06:56] 2025-04-13 13:06:37,606 | INFO     | -- intersect: -4437313032.616037
[2025-04-13 09:06:56] 2025-04-13 13:06:37,606 | INFO     | intersect: -4437313032.616037
[2025-04-13 09:06:56] 2025-04-13 13:06:37,606 | INFO     | chi2: 6.139344123830202
[2025-04-13 09:06:56] 2025-04-13 13:06:37,607 | INFO     | current chi2=6.139344123830202 (change=34.33739275768982 %)
[2025-04-13 09:06:56] 2025-04-13 13:06:37,608 | INFO     | sum of square deviations: 517282212653.87897
[2025-04-13 09:06:56] 2025-04-13 13:06:37,657 | INFO     | sum of deviations: 1038340354171.5807
[2025-04-13 09:06:56] 2025-04-13 13:06:37,657 | INFO     | mean x: 1744513356.7883642
[2025-04-13 09:06:56] 2025-04-13 13:06:37,657 | INFO     | mean y: 2549504.5202360875
[2025-04-13 09:06:56] 2025-04-13 13:06:37,658 | INFO     | -- intersect: -3499211376.5497575
[2025-04-13 09:06:56] 2025-04-13 13:06:37,658 | INFO     | intersect: -3499211376.5497575
[2025-04-13 09:06:56] 2025-04-13 13:06:37,668 | INFO     | chi2: 4.100072530286702
[2025-04-13 09:06:56] 2025-04-13 13:06:37,668 | INFO     | current chi2=4.100072530286702 (change=33.21644059058288 %)
[2025-04-13 09:06:56] 2025-04-13 13:06:37,670 | INFO     | sum of square deviations: 510766861663.04395
[2025-04-13 09:06:56] 2025-04-13 13:06:37,722 | INFO     | sum of deviations: 778576932952.5723
[2025-04-13 09:06:56] 2025-04-13 13:06:37,723 | INFO     | mean x: 1744513509.2938187
[2025-04-13 09:06:56] 2025-04-13 13:06:37,723 | INFO     | mean y: 2555584.7908552075
[2025-04-13 09:06:56] 2025-04-13 13:06:37,723 | INFO     | -- intersect: -2656657609.1464367
[2025-04-13 09:06:56] 2025-04-13 13:06:37,723 | INFO     | intersect: -2656657609.1464367
[2025-04-13 09:06:56] 2025-04-13 13:06:37,725 | INFO     | chi2: 2.53873648516196
[2025-04-13 09:06:56] 2025-04-13 13:06:37,725 | INFO     | current chi2=2.53873648516196 (change=38.08069329484675 %)
[2025-04-13 09:06:56] 2025-04-13 13:06:37,727 | INFO     | sum of square deviations: 504306585653.8333
[2025-04-13 09:06:56] 2025-04-13 13:06:37,763 | INFO     | sum of deviations: 568316490108.6064
[2025-04-13 09:06:56] 2025-04-13 13:06:37,764 | INFO     | mean x: 1744513661.797619
[2025-04-13 09:06:56] 2025-04-13 13:06:37,764 | INFO     | mean y: 2560545.5025510206
[2025-04-13 09:06:56] 2025-04-13 13:06:37,764 | INFO     | -- intersect: -1963378249.3159602
[2025-04-13 09:06:56] 2025-04-13 13:06:37,764 | INFO     | intersect: -1963378249.3159602
[2025-04-13 09:06:56] 2025-04-13 13:06:37,765 | INFO     | chi2: 1.4588193970248866
[2025-04-13 09:06:56] 2025-04-13 13:06:37,766 | INFO     | current chi2=1.4588193970248866 (change=42.53758097576557 %)
[2025-04-13 09:06:56] 2025-04-13 13:06:37,767 | INFO     | sum of square deviations: 497900937094.9834
[2025-04-13 09:06:56] 2025-04-13 13:06:37,804 | INFO     | sum of deviations: 456327727582.78546
[2025-04-13 09:06:56] 2025-04-13 13:06:37,804 | INFO     | mean x: 1744513814.3023057
[2025-04-13 09:06:56] 2025-04-13 13:06:37,805 | INFO     | mean y: 2563210.7463706234
[2025-04-13 09:06:56] 2025-04-13 13:06:37,805 | INFO     | -- intersect: -1596289021.3101523
[2025-04-13 09:06:56] 2025-04-13 13:06:37,805 | INFO     | intersect: -1596289021.3101523
[2025-04-13 09:06:56] 2025-04-13 13:06:37,806 | INFO     | chi2: 1.1787702121370651
[2025-04-13 09:06:56] 2025-04-13 13:06:37,807 | INFO     | current chi2=1.1787702121370651 (change=19.196974310799078 %)
[2025-04-13 09:06:56] 2025-04-13 13:06:37,807 | INFO     | left removable region: 60
[2025-04-13 09:06:56] 2025-04-13 13:06:37,808 | INFO     | sum of square deviations: 453376295530.90356
[2025-04-13 09:06:56] 2025-04-13 13:06:37,841 | INFO     | sum of deviations: 234025799692.83685
[2025-04-13 09:06:56] 2025-04-13 13:06:37,841 | INFO     | mean x: 1744514546.3198237
[2025-04-13 09:06:56] 2025-04-13 13:06:37,842 | INFO     | mean y: 2572413.1850220263
[2025-04-13 09:06:56] 2025-04-13 13:06:37,842 | INFO     | -- intersect: -897918891.2847214
[2025-04-13 09:06:56] 2025-04-13 13:06:37,842 | INFO     | intersect: -897918891.2847214
[2025-04-13 09:06:56] 2025-04-13 13:06:37,843 | INFO     | chi2: 0.03686865337685452
[2025-04-13 09:06:56] 2025-04-13 13:06:37,844 | INFO     | -- intersect: -897918891.2847214
[2025-04-13 09:06:56] 2025-04-13 13:06:37,844 | INFO     | current memory leak: 0.52 B/s (using 1135 data points, chi2=0.04)
[2025-04-13 09:06:56] 2025-04-13 13:06:37,846 | INFO     | ..............................
[2025-04-13 09:06:56] 2025-04-13 13:06:37,846 | INFO     | . Timing measurements:
[2025-04-13 09:06:56] 2025-04-13 13:06:37,846 | INFO     | . get job = 0 s
[2025-04-13 09:06:56] 2025-04-13 13:06:37,846 | INFO     | . initial setup = 10 s
[2025-04-13 09:06:56] 2025-04-13 13:06:37,846 | INFO     | . payload setup = 114 s
[2025-04-13 09:06:56] 2025-04-13 13:06:37,846 | INFO     | . stage-in = 0 s
[2025-04-13 09:06:56] 2025-04-13 13:06:37,847 | INFO     | . payload execution = 73362 s
[2025-04-13 09:06:56] 2025-04-13 13:06:37,847 | INFO     | . stage-out = 5 s
[2025-04-13 09:06:56] 2025-04-13 13:06:37,847 | INFO     | . log creation = 0 s
[2025-04-13 09:06:56] 2025-04-13 13:06:37,847 | INFO     | ..............................
[2025-04-13 09:06:56] 2025-04-13 13:06:38,614 | INFO     | 
[2025-04-13 09:06:56] 2025-04-13 13:06:38,614 | INFO     | job summary report
[2025-04-13 09:06:56] 2025-04-13 13:06:38,614 | INFO     | --------------------------------------------------
[2025-04-13 09:06:56] 2025-04-13 13:06:38,614 | INFO     | PanDA job id: 6600415808
[2025-04-13 09:06:56] 2025-04-13 13:06:38,615 | INFO     | task id: 44075164
[2025-04-13 09:06:56] 2025-04-13 13:06:38,615 | INFO     | errors: (none)
[2025-04-13 09:06:56] 2025-04-13 13:06:38,615 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 09:06:56] 2025-04-13 13:06:38,623 | INFO     | pilot state: finished 
[2025-04-13 09:06:56] 2025-04-13 13:06:38,623 | INFO     | transexitcode: 0
[2025-04-13 09:06:56] 2025-04-13 13:06:38,623 | INFO     | exeerrorcode: 0
[2025-04-13 09:06:56] 2025-04-13 13:06:38,624 | INFO     | exeerrordiag: 
[2025-04-13 09:06:56] 2025-04-13 13:06:38,624 | INFO     | exitcode: 0
[2025-04-13 09:06:56] 2025-04-13 13:06:38,624 | INFO     | exitmsg: OK
[2025-04-13 09:06:56] 2025-04-13 13:06:38,624 | INFO     | cpuconsumptiontime: 56928 s
[2025-04-13 09:06:56] 2025-04-13 13:06:38,631 | INFO     | nevents: 400
[2025-04-13 09:06:56] 2025-04-13 13:06:38,631 | INFO     | neventsw: 0
[2025-04-13 09:06:56] 2025-04-13 13:06:38,631 | INFO     | pid: 26246
[2025-04-13 09:06:56] 2025-04-13 13:06:38,632 | INFO     | pgrp: 26246
[2025-04-13 09:06:56] 2025-04-13 13:06:38,632 | INFO     | corecount: 10
[2025-04-13 09:06:56] 2025-04-13 13:06:38,632 | INFO     | event service: False
[2025-04-13 09:06:56] 2025-04-13 13:06:38,632 | INFO     | sizes: {0: 2417156, 1: 2417355, 2: 2417355, 13: 2417383, 24: 2417439, 35: 2417467, 45: 2417623, 48: 2417857, 56: 2417885, 73481: 2470949, 73487: 2479890, 73490: 24
[2025-04-13 09:06:56] 2025-04-13 13:06:38,632 | INFO     | --------------------------------------------------
[2025-04-13 09:06:56] 2025-04-13 13:06:38,632 | INFO     | 
[2025-04-13 09:06:56] 2025-04-13 13:06:38,632 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-13 09:06:56] 2025-04-13 13:06:38,687 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,688 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,688 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,688 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,689 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,689 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,689 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,689 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,689 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,691 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 09:06:56] 2025-04-13 13:06:38,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,692 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 09:06:56] 2025-04-13 13:06:38,692 | INFO     | job 6600415808 has completed (purged errors)
[2025-04-13 09:06:56] 2025-04-13 13:06:38,692 | INFO     | overall cleanup function is called
[2025-04-13 09:06:56] 2025-04-13 13:06:39,702 | INFO     | --- collectZombieJob: --- 10, [26246]
[2025-04-13 09:06:56] 2025-04-13 13:06:39,702 | INFO     | zombie collector waiting for pid 26246
[2025-04-13 09:06:56] 2025-04-13 13:06:39,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 09:06:56] 2025-04-13 13:06:39,703 | INFO     | collected zombie processes
[2025-04-13 09:06:56] 2025-04-13 13:06:39,703 | INFO     | will attempt to kill all subprocesses of pid=26246
[2025-04-13 09:06:56] 2025-04-13 13:06:40,249 | INFO     | process IDs to be killed: [26246] (in reverse order)
[2025-04-13 09:06:56] 2025-04-13 13:06:40,870 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 09:06:56] 2025-04-13 13:06:40,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 09:06:56] 2025-04-13 13:06:40,883 | INFO     | did not find any defunct processes belonging to 26246
[2025-04-13 09:06:56] 2025-04-13 13:06:40,897 | INFO     | did not find any defunct processes belonging to 26246
[2025-04-13 09:06:56] 2025-04-13 13:06:40,898 | INFO     | ready for new job
[2025-04-13 09:06:56] 2025-04-13 13:06:40,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 09:06:56] 2025-04-13 13:06:40,902 | INFO     | **************************************
[2025-04-13 09:06:56] 2025-04-13 13:06:40,902 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 09:06:56] 2025-04-13 13:06:40,902 | INFO     | **************************************
[2025-04-13 09:06:56] 2025-04-13 13:06:40,902 | INFO     | 
[2025-04-13 09:06:56] 2025-04-13 13:06:40,904 | INFO     | architecture information:
[2025-04-13 09:06:56] 2025-04-13 13:06:40,909 | INFO     | executing command: cat /etc/os-release
[2025-04-13 09:06:56] 2025-04-13 13:06:41,051 | INFO     | cat /etc/os-release:
[2025-04-13 09:06:56] NAME="CentOS Linux"
[2025-04-13 09:06:56] VERSION="7 (Core)"
[2025-04-13 09:06:56] ID="centos"
[2025-04-13 09:06:56] ID_LIKE="rhel fedora"
[2025-04-13 09:06:56] VERSION_ID="7"
[2025-04-13 09:06:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 09:06:56] ANSI_COLOR="0;31"
[2025-04-13 09:06:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 09:06:56] HOME_URL="https://www.centos.org/"
[2025-04-13 09:06:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 09:06:56] 
[2025-04-13 09:06:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 09:06:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 09:06:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 09:06:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 09:06:56] 
[2025-04-13 09:06:56] 2025-04-13 13:06:41,052 | INFO     | **************************************
[2025-04-13 09:06:56] 2025-04-13 13:06:41,571 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-13 09:06:56] 2025-04-13 13:06:41,605 | INFO     | sufficient remaining disk space (56945016832 B)
[2025-04-13 09:06:56] 2025-04-13 13:06:41,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 09:06:56] 2025-04-13 13:06:41,606 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 09:06:56] 2025-04-13 13:06:41,606 | INFO     | update_server=False
[2025-04-13 09:06:56] 2025-04-13 13:06:41,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 09:06:56] 2025-04-13 13:06:41,718 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 09:06:56] 2025-04-13 13:06:41,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 09:06:56] 2025-04-13 13:06:41,719 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 09:06:56] 2025-04-13 13:06:41,743 | INFO     | all job control threads have been joined
[2025-04-13 09:06:56] 2025-04-13 13:06:41,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 09:06:56] 2025-04-13 13:06:41,946 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-13 09:06:56] 2025-04-13 13:06:41,947 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-13 09:06:56] 2025-04-13 13:06:41,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 09:06:56] 2025-04-13 13:06:41,947 | INFO     | will abort loop
[2025-04-13 09:06:56] 2025-04-13 13:06:42,233 | INFO     | all data control threads have been joined
[2025-04-13 09:06:56] 2025-04-13 13:06:42,612 | INFO     | [job] retrieve thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:42,726 | INFO     | [payload] validate_post thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:42,741 | INFO     | all payload control threads have been joined
[2025-04-13 09:06:56] 2025-04-13 13:06:42,749 | INFO     | [job] control thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:42,945 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:42,952 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:42,953 | INFO     | [job] job monitor thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:43,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 09:06:56] 2025-04-13 13:06:43,241 | INFO     | [data] control thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:43,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:43,675 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:43,676 | INFO     | [job] validate thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:43,734 | INFO     | [data] copytool_in thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:43,747 | INFO     | [payload] control thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:43,818 | INFO     | [payload] failed_post thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:43,918 | INFO     | [data] copytool_out thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:44,177 | INFO     | [job] queue monitor thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:44,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 09:06:56] 2025-04-13 13:06:48,679 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 09:06:56] 2025-04-13 13:06:49,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796300711744)>', '<ExcThread(monitor, started 139795833526016)>']
[2025-04-13 09:06:56] 2025-04-13 13:06:50,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 09:06:56] 2025-04-13 13:06:50,771 | INFO     | [monitor] control thread has ended
[2025-04-13 09:06:56] 2025-04-13 13:06:54,903 | INFO     | all workflow threads have been joined
[2025-04-13 09:06:56] 2025-04-13 13:06:54,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 09:06:56] 2025-04-13 13:06:54,904 | INFO     | traces error code: 0
[2025-04-13 09:06:56] 2025-04-13 13:06:54,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 09:06:56] 2025-04-13 13:06:55,175 [wrapper] ==== pilot stdout END ====
[2025-04-13 09:06:56] 2025-04-13 13:06:55,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 09:06:56] 2025-04-13 13:06:55,237 [wrapper] pilotpid: 14546
[2025-04-13 09:06:56] 2025-04-13 13:06:55,260 [wrapper] Pilot exit status: 0
[2025-04-13 09:06:56] 2025-04-13 13:06:55,405 [wrapper] pandaids: 6600415808
[2025-04-13 09:06:56] 2025-04-13 13:06:55,818 [wrapper] cleanup supervisor_pilot 36228 14547
[2025-04-13 09:06:56] 2025-04-13 13:06:55,824 [wrapper] Test setup, not cleaning
[2025-04-13 09:06:56] 2025-04-13 13:06:55,829 [wrapper] apfmon messages muted
[2025-04-13 09:06:56] 2025-04-13 13:06:55,837 [wrapper] ==== wrapper stdout END ====
[2025-04-13 09:06:56] 2025-04-13 13:06:55,841 [wrapper] ==== wrapper stderr END ====
[2025-04-13 09:06:56]  *** Error codes and diagnostics ***
[2025-04-13 09:06:56]     "exeErrorCode": 0,
[2025-04-13 09:06:56]     "exeErrorDiag": "",
[2025-04-13 09:06:56]     "pilotErrorCode": 0,
[2025-04-13 09:06:56]     "pilotErrorDiag": "",
[2025-04-13 09:06:56]  *** Listing of results directory ***
[2025-04-13 09:06:56] total 417292
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas    495897 Apr 12 05:27 pilot3.tar.gz
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 05:40 queuedata.json
[2025-04-13 09:06:56] -rwx------ 1 boincer umatlas     37140 Apr 12 05:41 runpilot2-wrapper.sh
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas       100 Apr 12 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 09:06:56] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 12:36 run_atlas
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas       105 Apr 12 12:36 job.xml
[2025-04-13 09:06:56] -rw-r--r-- 2 boincer umatlas 221742595 Apr 12 12:36 EVNT.44075162._001657.pool.root.1
[2025-04-13 09:06:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 12:36 start_atlas.sh
[2025-04-13 09:06:56] drwxrwx--x 2 boincer umatlas      4096 Apr 12 12:36 shared
[2025-04-13 09:06:56] -rw-r--r-- 2 boincer umatlas    508884 Apr 12 12:36 input.tar.gz
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas         0 Apr 12 12:36 boinc_lockfile
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas      2550 Apr 12 12:37 pandaJob.out
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas       467 Apr 12 12:37 setup.sh.local
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas    986068 Apr 12 12:38 agis_schedconf.cvmfs.json
[2025-04-13 09:06:56] drwx------ 4 boincer umatlas      4096 Apr 12 12:39 pilot3
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas      6228 Apr 13 09:01 init_data.xml
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas 190763783 Apr 13 09:04 HITS.44075164._042718.pool.root.1
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas       531 Apr 13 09:04 boinc_task_state.xml
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas      1065 Apr 13 09:05 memory_monitor_summary.json
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas   1603529 Apr 13 09:05 agis_ddmendpoints.agis.ALL.json
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas    840748 Apr 13 09:05 log.44075164._042718.job.log.tgz.1
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas        95 Apr 13 09:05 pilot_heartbeat.json
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas      7767 Apr 13 09:06 heartbeat.json
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas      4539 Apr 13 09:06 pilotlog.txt
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas        28 Apr 13 09:06 wrapper_checkpoint.txt
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas   4634494 Apr 13 09:06 log.44075164._042718.job.log.1
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 09:06 boinc_mmap_file
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas       357 Apr 13 09:06 output.list
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas       620 Apr 13 09:06 runtime_log
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas   5498880 Apr 13 09:06 result.tar.gz
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas       664 Apr 13 09:06 To2KDmcXmN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmcBRLDmvXHSEo.diag
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas     11421 Apr 13 09:06 runtime_log.err
[2025-04-13 09:06:56] -rw-r--r-- 1 boincer umatlas     20896 Apr 13 09:06 stderr.txt
[2025-04-13 09:06:56] HITS file was successfully produced:
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas 190763783 Apr 13 09:04 shared/HITS.pool.root.1
[2025-04-13 09:06:56]  *** Contents of shared directory: ***
[2025-04-13 09:06:56] total 408740
[2025-04-13 09:06:56] -rw-r--r-- 2 boincer umatlas 221742595 Apr 12 12:36 ATLAS.root_0
[2025-04-13 09:06:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 12:36 start_atlas.sh
[2025-04-13 09:06:56] -rw-r--r-- 2 boincer umatlas    508884 Apr 12 12:36 input.tar.gz
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas 190763783 Apr 13 09:04 HITS.pool.root.1
[2025-04-13 09:06:56] -rw------- 1 boincer umatlas   5498880 Apr 13 09:06 result.tar.gz
09:06:58 (32594): run_atlas exited; CPU time 59737.052897
09:06:58 (32594): called boinc_finish(0)

</stderr_txt>
]]>

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