Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:44:28 (5972): wrapper (7.7.26015): starting
12:44:28 (5972): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 12:44:28] Arguments: --nthreads 12
[2025-04-12 12:44:28] Threads: 12
[2025-04-12 12:44:28] Checking for CVMFS
[2025-04-12 12:44:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 12:44:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 12:44:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 12:44:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 12:44:41] 2.11.2.0 2080 238905 121668 144776 0 960 18233187 18432001 6810 130560 0 52291853 98.248 207279134 32358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 12:44:41] CVMFS is ok
[2025-04-12 12:44:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 12:44:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 12:44:41] Further information can be found at the LHC@home message board.
[2025-04-12 12:44:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 12:44:41] Checking for apptainer binary...
[2025-04-12 12:44:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 12:44:41] Running /usr/bin/apptainer --version
[2025-04-12 12:44:43] apptainer version 1.3.2-1.el7
[2025-04-12 12:44:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 12:45:02] c-206-5.aglt2.org
[2025-04-12 12:45:02] apptainer works
[2025-04-12 12:45:02] Set ATHENA_PROC_NUMBER=12
[2025-04-12 12:45:02] Set ATHENA_CORE_NUMBER=12
[2025-04-12 12:45:03] Starting ATLAS job with PandaID=6600393488
[2025-04-12 12:45:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 07:44:40]  *** The last 200 lines of the pilot log: ***
[2025-04-13 07:44:40] 2025-04-13 11:44:24,886 | INFO     | sum of square deviations: 420640579152.9922
[2025-04-13 07:44:40] 2025-04-13 11:44:24,932 | INFO     | sum of deviations: 1411178687132.855
[2025-04-13 07:44:40] 2025-04-13 11:44:24,932 | INFO     | mean x: 1744510901.891599
[2025-04-13 07:44:40] 2025-04-13 11:44:24,932 | INFO     | mean y: 2623519.640469738
[2025-04-13 07:44:40] 2025-04-13 11:44:24,932 | INFO     | -- intersect: -5849918356.318069
[2025-04-13 07:44:40] 2025-04-13 11:44:24,933 | INFO     | intersect: -5849918356.318069
[2025-04-13 07:44:40] 2025-04-13 11:44:24,934 | INFO     | chi2: 8.53212689486537
[2025-04-13 07:44:40] 2025-04-13 11:44:24,935 | INFO     | current chi2=8.53212689486537 (change=34.75483427490779 %)
[2025-04-13 07:44:40] 2025-04-13 11:44:24,936 | INFO     | sum of square deviations: 414965913200.1169
[2025-04-13 07:44:40] 2025-04-13 11:44:24,976 | INFO     | sum of deviations: 1081015499530.7577
[2025-04-13 07:44:40] 2025-04-13 11:44:24,977 | INFO     | mean x: 1744511054.3983667
[2025-04-13 07:44:40] 2025-04-13 11:44:24,977 | INFO     | mean y: 2632391.1987295826
[2025-04-13 07:44:40] 2025-04-13 11:44:24,977 | INFO     | -- intersect: -4541942063.999794
[2025-04-13 07:44:40] 2025-04-13 11:44:24,977 | INFO     | intersect: -4541942063.999794
[2025-04-13 07:44:40] 2025-04-13 11:44:24,979 | INFO     | chi2: 5.67231840492409
[2025-04-13 07:44:40] 2025-04-13 11:44:24,979 | INFO     | current chi2=5.67231840492409 (change=33.51811951674454 %)
[2025-04-13 07:44:40] 2025-04-13 11:44:24,981 | INFO     | sum of square deviations: 409342503654.14014
[2025-04-13 07:44:40] 2025-04-13 11:44:25,015 | INFO     | sum of deviations: 810772529109.6569
[2025-04-13 07:44:40] 2025-04-13 11:44:25,016 | INFO     | mean x: 1744511206.905196
[2025-04-13 07:44:40] 2025-04-13 11:44:25,016 | INFO     | mean y: 2639719.515952598
[2025-04-13 07:44:40] 2025-04-13 11:44:25,016 | INFO     | -- intersect: -3452661771.6717687
[2025-04-13 07:44:40] 2025-04-13 11:44:25,016 | INFO     | intersect: -3452661771.6717687
[2025-04-13 07:44:40] 2025-04-13 11:44:25,018 | INFO     | chi2: 3.8032837276845024
[2025-04-13 07:44:40] 2025-04-13 11:44:25,018 | INFO     | current chi2=3.8032837276845024 (change=32.95010159544455 %)
[2025-04-13 07:44:40] 2025-04-13 11:44:25,020 | INFO     | sum of square deviations: 403770118810.56036
[2025-04-13 07:44:40] 2025-04-13 11:44:25,054 | INFO     | sum of deviations: 579502748612.6144
[2025-04-13 07:44:40] 2025-04-13 11:44:25,055 | INFO     | mean x: 1744511359.412088
[2025-04-13 07:44:40] 2025-04-13 11:44:25,055 | INFO     | mean y: 2646048.923076923
[2025-04-13 07:44:40] 2025-04-13 11:44:25,055 | INFO     | -- intersect: -2501127956.7990932
[2025-04-13 07:44:40] 2025-04-13 11:44:25,055 | INFO     | intersect: -2501127956.7990932
[2025-04-13 07:44:40] 2025-04-13 11:44:25,057 | INFO     | chi2: 2.4513065934062017
[2025-04-13 07:44:40] 2025-04-13 11:44:25,057 | INFO     | current chi2=2.4513065934062017 (change=35.54762755239944 %)
[2025-04-13 07:44:40] 2025-04-13 11:44:25,059 | INFO     | sum of square deviations: 398248525982.8757
[2025-04-13 07:44:40] 2025-04-13 11:44:25,096 | INFO     | sum of deviations: 383906282009.47925
[2025-04-13 07:44:40] 2025-04-13 11:44:25,097 | INFO     | mean x: 1744511511.9190433
[2025-04-13 07:44:40] 2025-04-13 11:44:25,097 | INFO     | mean y: 2651448.653173873
[2025-04-13 07:44:40] 2025-04-13 11:44:25,097 | INFO     | -- intersect: -1679034445.3766587
[2025-04-13 07:44:40] 2025-04-13 11:44:25,097 | INFO     | intersect: -1679034445.3766587
[2025-04-13 07:44:40] 2025-04-13 11:44:25,099 | INFO     | chi2: 1.4442537548742131
[2025-04-13 07:44:40] 2025-04-13 11:44:25,099 | INFO     | current chi2=1.4442537548742131 (change=41.082288165865165 %)
[2025-04-13 07:44:40] 2025-04-13 11:44:25,101 | INFO     | sum of square deviations: 392777359256.8765
[2025-04-13 07:44:40] 2025-04-13 11:44:25,138 | INFO     | sum of deviations: 278589207104.11694
[2025-04-13 07:44:40] 2025-04-13 11:44:25,139 | INFO     | mean x: 1744511664.4279113
[2025-04-13 07:44:40] 2025-04-13 11:44:25,139 | INFO     | mean y: 2654383.7643253235
[2025-04-13 07:44:40] 2025-04-13 11:44:25,139 | INFO     | -- intersect: -1234693212.5848053
[2025-04-13 07:44:40] 2025-04-13 11:44:25,139 | INFO     | intersect: -1234693212.5848053
[2025-04-13 07:44:40] 2025-04-13 11:44:25,141 | INFO     | chi2: 1.1720718924282953
[2025-04-13 07:44:40] 2025-04-13 11:44:25,141 | INFO     | current chi2=1.1720718924282953 (change=18.845847658510912 %)
[2025-04-13 07:44:40] 2025-04-13 11:44:25,141 | INFO     | left removable region: 60
[2025-04-13 07:44:40] 2025-04-13 11:44:25,143 | INFO     | sum of square deviations: 354860997388.6081
[2025-04-13 07:44:40] 2025-04-13 11:44:25,178 | INFO     | sum of deviations: 219643509260.69986
[2025-04-13 07:44:40] 2025-04-13 11:44:25,178 | INFO     | mean x: 1744512396.4474187
[2025-04-13 07:44:40] 2025-04-13 11:44:25,178 | INFO     | mean y: 2660241.203632887
[2025-04-13 07:44:40] 2025-04-13 11:44:25,178 | INFO     | -- intersect: -1077116988.5404806
[2025-04-13 07:44:40] 2025-04-13 11:44:25,179 | INFO     | intersect: -1077116988.5404806
[2025-04-13 07:44:40] 2025-04-13 11:44:25,180 | INFO     | chi2: 0.10953434005786739
[2025-04-13 07:44:40] 2025-04-13 11:44:25,181 | INFO     | -- intersect: -1077116988.5404806
[2025-04-13 07:44:40] 2025-04-13 11:44:25,181 | INFO     | current memory leak: 0.62 B/s (using 1046 data points, chi2=0.11)
[2025-04-13 07:44:40] 2025-04-13 11:44:25,183 | INFO     | ..............................
[2025-04-13 07:44:40] 2025-04-13 11:44:25,183 | INFO     | . Timing measurements:
[2025-04-13 07:44:40] 2025-04-13 11:44:25,183 | INFO     | . get job = 2 s
[2025-04-13 07:44:40] 2025-04-13 11:44:25,183 | INFO     | . initial setup = 26 s
[2025-04-13 07:44:40] 2025-04-13 11:44:25,183 | INFO     | . payload setup = 114 s
[2025-04-13 07:44:40] 2025-04-13 11:44:25,184 | INFO     | . stage-in = 1 s
[2025-04-13 07:44:40] 2025-04-13 11:44:25,184 | INFO     | . payload execution = 67911 s
[2025-04-13 07:44:40] 2025-04-13 11:44:25,184 | INFO     | . stage-out = 3 s
[2025-04-13 07:44:40] 2025-04-13 11:44:25,184 | INFO     | . log creation = 0 s
[2025-04-13 07:44:40] 2025-04-13 11:44:25,184 | INFO     | ..............................
[2025-04-13 07:44:40] 2025-04-13 11:44:25,727 | INFO     | 
[2025-04-13 07:44:40] 2025-04-13 11:44:25,736 | INFO     | job summary report
[2025-04-13 07:44:40] 2025-04-13 11:44:25,736 | INFO     | --------------------------------------------------
[2025-04-13 07:44:40] 2025-04-13 11:44:25,736 | INFO     | PanDA job id: 6600393488
[2025-04-13 07:44:40] 2025-04-13 11:44:25,736 | INFO     | task id: 44075164
[2025-04-13 07:44:40] 2025-04-13 11:44:25,736 | INFO     | errors: (none)
[2025-04-13 07:44:40] 2025-04-13 11:44:25,736 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 07:44:40] 2025-04-13 11:44:25,736 | INFO     | pilot state: finished 
[2025-04-13 07:44:40] 2025-04-13 11:44:25,736 | INFO     | transexitcode: 0
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | exeerrorcode: 0
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | exeerrordiag: 
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | exitcode: 0
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | exitmsg: OK
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | cpuconsumptiontime: 95082 s
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | nevents: 400
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | neventsw: 0
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | pid: 23954
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | pgrp: 23954
[2025-04-13 07:44:40] 2025-04-13 11:44:25,737 | INFO     | corecount: 12
[2025-04-13 07:44:40] 2025-04-13 11:44:25,738 | INFO     | event service: False
[2025-04-13 07:44:40] 2025-04-13 11:44:25,738 | INFO     | sizes: {0: 2417155, 1: 2417183, 2: 2417354, 13: 2417382, 25: 2417438, 39: 2417466, 51: 2417622, 62: 2417856, 73: 2417884, 68032: 2469015, 68037: 2477956, 68039: 24
[2025-04-13 07:44:40] 2025-04-13 11:44:25,738 | INFO     | --------------------------------------------------
[2025-04-13 07:44:40] 2025-04-13 11:44:25,738 | INFO     | 
[2025-04-13 07:44:40] 2025-04-13 11:44:25,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-13 07:44:40] 2025-04-13 11:44:25,780 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,780 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,780 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,780 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,781 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,782 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 07:44:40] 2025-04-13 11:44:25,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,782 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 07:44:40] 2025-04-13 11:44:25,792 | INFO     | job 6600393488 has completed (purged errors)
[2025-04-13 07:44:40] 2025-04-13 11:44:25,792 | INFO     | overall cleanup function is called
[2025-04-13 07:44:40] 2025-04-13 11:44:26,799 | INFO     | --- collectZombieJob: --- 10, [23954]
[2025-04-13 07:44:40] 2025-04-13 11:44:26,799 | INFO     | zombie collector waiting for pid 23954
[2025-04-13 07:44:40] 2025-04-13 11:44:26,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 07:44:40] 2025-04-13 11:44:26,800 | INFO     | collected zombie processes
[2025-04-13 07:44:40] 2025-04-13 11:44:26,800 | INFO     | will attempt to kill all subprocesses of pid=23954
[2025-04-13 07:44:40] 2025-04-13 11:44:27,042 | INFO     | process IDs to be killed: [23954] (in reverse order)
[2025-04-13 07:44:40] 2025-04-13 11:44:27,101 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 07:44:40] 2025-04-13 11:44:27,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 07:44:40] 2025-04-13 11:44:27,106 | INFO     | did not find any defunct processes belonging to 23954
[2025-04-13 07:44:40] 2025-04-13 11:44:27,111 | INFO     | did not find any defunct processes belonging to 23954
[2025-04-13 07:44:40] 2025-04-13 11:44:27,111 | INFO     | ready for new job
[2025-04-13 07:44:40] 2025-04-13 11:44:27,111 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 07:44:40] 2025-04-13 11:44:27,113 | INFO     | **************************************
[2025-04-13 07:44:40] 2025-04-13 11:44:27,114 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 07:44:40] 2025-04-13 11:44:27,114 | INFO     | **************************************
[2025-04-13 07:44:40] 2025-04-13 11:44:27,114 | INFO     | 
[2025-04-13 07:44:40] 2025-04-13 11:44:27,115 | INFO     | architecture information:
[2025-04-13 07:44:40] 2025-04-13 11:44:27,115 | INFO     | executing command: cat /etc/os-release
[2025-04-13 07:44:40] 2025-04-13 11:44:27,134 | INFO     | cat /etc/os-release:
[2025-04-13 07:44:40] NAME="CentOS Linux"
[2025-04-13 07:44:40] VERSION="7 (Core)"
[2025-04-13 07:44:40] ID="centos"
[2025-04-13 07:44:40] ID_LIKE="rhel fedora"
[2025-04-13 07:44:40] VERSION_ID="7"
[2025-04-13 07:44:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 07:44:40] ANSI_COLOR="0;31"
[2025-04-13 07:44:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 07:44:40] HOME_URL="https://www.centos.org/"
[2025-04-13 07:44:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 07:44:40] 
[2025-04-13 07:44:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 07:44:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 07:44:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 07:44:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 07:44:40] 
[2025-04-13 07:44:40] 2025-04-13 11:44:27,134 | INFO     | **************************************
[2025-04-13 07:44:40] 2025-04-13 11:44:27,653 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-13 07:44:40] 2025-04-13 11:44:27,667 | INFO     | sufficient remaining disk space (29219618816 B)
[2025-04-13 07:44:40] 2025-04-13 11:44:27,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 07:44:40] 2025-04-13 11:44:27,668 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 07:44:40] 2025-04-13 11:44:27,668 | INFO     | update_server=False
[2025-04-13 07:44:40] 2025-04-13 11:44:27,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 07:44:40] 2025-04-13 11:44:27,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 07:44:40] 2025-04-13 11:44:27,669 | INFO     | aborting loop
[2025-04-13 07:44:40] 2025-04-13 11:44:28,006 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 07:44:40] 2025-04-13 11:44:28,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 07:44:40] 2025-04-13 11:44:28,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 07:44:40] 2025-04-13 11:44:28,456 | INFO     | all data control threads have been joined
[2025-04-13 07:44:40] 2025-04-13 11:44:28,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 07:44:40] 2025-04-13 11:44:28,673 | INFO     | [job] retrieve thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:28,674 | INFO     | [job] job monitor thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:28,745 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:28,776 | INFO     | [payload] validate_post thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:28,833 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:29,058 | INFO     | all job control threads have been joined
[2025-04-13 07:44:40] 2025-04-13 11:44:29,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 07:44:40] 2025-04-13 11:44:29,159 | INFO     | all payload control threads have been joined
[2025-04-13 07:44:40] 2025-04-13 11:44:29,160 | INFO     | [payload] failed_post thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:29,234 | INFO     | [job] validate thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:29,461 | INFO     | [data] control thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:29,658 | INFO     | [data] copytool_in thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:29,658 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:30,063 | INFO     | [job] control thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:30,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:30,165 | INFO     | [payload] control thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:30,555 | INFO     | [data] copytool_out thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:30,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 07:44:40] 2025-04-13 11:44:31,663 | INFO     | [job] queue monitor thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:33,161 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 07:44:40] 2025-04-13 11:44:33,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671263008576)>', '<ExcThread(monitor, started 139670960715520)>']
[2025-04-13 07:44:40] 2025-04-13 11:44:34,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 07:44:40] 2025-04-13 11:44:34,044 | INFO     | [monitor] control thread has ended
[2025-04-13 07:44:40] 2025-04-13 11:44:38,185 | INFO     | all workflow threads have been joined
[2025-04-13 07:44:40] 2025-04-13 11:44:38,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 07:44:40] 2025-04-13 11:44:38,186 | INFO     | traces error code: 0
[2025-04-13 07:44:40] 2025-04-13 11:44:38,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 07:44:40] 2025-04-13 11:44:39,253 [wrapper] ==== pilot stdout END ====
[2025-04-13 07:44:40] 2025-04-13 11:44:39,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 07:44:40] 2025-04-13 11:44:39,272 [wrapper] pilotpid: 13016
[2025-04-13 07:44:40] 2025-04-13 11:44:39,275 [wrapper] Pilot exit status: 0
[2025-04-13 07:44:40] 2025-04-13 11:44:39,342 [wrapper] pandaids: 6600393488
[2025-04-13 07:44:40] 2025-04-13 11:44:39,427 [wrapper] cleanup supervisor_pilot 13378 13017
[2025-04-13 07:44:40] 2025-04-13 11:44:39,434 [wrapper] Test setup, not cleaning
[2025-04-13 07:44:40] 2025-04-13 11:44:39,457 [wrapper] apfmon messages muted
[2025-04-13 07:44:40] 2025-04-13 11:44:39,460 [wrapper] ==== wrapper stdout END ====
[2025-04-13 07:44:40] 2025-04-13 11:44:39,463 [wrapper] ==== wrapper stderr END ====
[2025-04-13 07:44:40]  *** Error codes and diagnostics ***
[2025-04-13 07:44:40]     "exeErrorCode": 0,
[2025-04-13 07:44:40]     "exeErrorDiag": "",
[2025-04-13 07:44:40]     "pilotErrorCode": 0,
[2025-04-13 07:44:40]     "pilotErrorDiag": "",
[2025-04-13 07:44:40]  *** Listing of results directory ***
[2025-04-13 07:44:40] total 422472
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas    495897 Apr 12 00:31 pilot3.tar.gz
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 00:56 queuedata.json
[2025-04-13 07:44:40] -rwx------ 1 boincer umatlas     37140 Apr 12 00:58 runpilot2-wrapper.sh
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas       100 Apr 12 12:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 07:44:40] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 12:44 run_atlas
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas       105 Apr 12 12:44 job.xml
[2025-04-13 07:44:40] -rw-r--r-- 2 boincer umatlas 219171622 Apr 12 12:44 EVNT.44075162._001537.pool.root.1
[2025-04-13 07:44:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 12:44 start_atlas.sh
[2025-04-13 07:44:40] drwxrwx--x 2 boincer umatlas      4096 Apr 12 12:44 shared
[2025-04-13 07:44:40] -rw-r--r-- 2 boincer umatlas    508885 Apr 12 12:44 input.tar.gz
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas         0 Apr 12 12:44 boinc_lockfile
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas      2549 Apr 12 12:45 pandaJob.out
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas       467 Apr 12 12:45 setup.sh.local
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas    986068 Apr 12 12:47 agis_schedconf.cvmfs.json
[2025-04-13 07:44:40] drwx------ 4 boincer umatlas      4096 Apr 12 12:47 pilot3
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas      5950 Apr 13 07:38 init_data.xml
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas 198495104 Apr 13 07:42 HITS.44075164._039726.pool.root.1
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas       531 Apr 13 07:43 boinc_task_state.xml
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas        95 Apr 13 07:43 pilot_heartbeat.json
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas      1066 Apr 13 07:44 memory_monitor_summary.json
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas   1603529 Apr 13 07:44 agis_ddmendpoints.agis.ALL.json
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas    879378 Apr 13 07:44 log.44075164._039726.job.log.tgz.1
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas      7783 Apr 13 07:44 heartbeat.json
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas        28 Apr 13 07:44 wrapper_checkpoint.txt
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 07:44 boinc_mmap_file
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas      4353 Apr 13 07:44 pilotlog.txt
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas   4674677 Apr 13 07:44 log.44075164._039726.job.log.1
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas       357 Apr 13 07:44 output.list
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas       620 Apr 13 07:44 runtime_log
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas   5570560 Apr 13 07:44 result.tar.gz
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas     11416 Apr 13 07:44 runtime_log.err
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas       664 Apr 13 07:44 Ip7KDmc7hN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmm1xKDmF414Hm.diag
[2025-04-13 07:44:40] -rw-r--r-- 1 boincer umatlas     20862 Apr 13 07:44 stderr.txt
[2025-04-13 07:44:40] HITS file was successfully produced:
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas 198495104 Apr 13 07:42 shared/HITS.pool.root.1
[2025-04-13 07:44:40]  *** Contents of shared directory: ***
[2025-04-13 07:44:40] total 413844
[2025-04-13 07:44:40] -rw-r--r-- 2 boincer umatlas 219171622 Apr 12 12:44 ATLAS.root_0
[2025-04-13 07:44:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 12:44 start_atlas.sh
[2025-04-13 07:44:40] -rw-r--r-- 2 boincer umatlas    508885 Apr 12 12:44 input.tar.gz
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas 198495104 Apr 13 07:42 HITS.pool.root.1
[2025-04-13 07:44:40] -rw------- 1 boincer umatlas   5570560 Apr 13 07:44 result.tar.gz
07:44:42 (5972): run_atlas exited; CPU time 96500.539339
07:44:42 (5972): called boinc_finish(0)

</stderr_txt>
]]>

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