Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:40:50 (18314): wrapper (7.7.26015): starting
12:40:50 (18314): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 12:40:50] Arguments: --nthreads 12
[2025-04-12 12:40:50] Threads: 12
[2025-04-12 12:40:50] Checking for CVMFS
[2025-04-12 12:40:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 12:40:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 12:40:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 12:40:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 12:40:50] 2.11.2.0 13814 389551 162572 144776 1 187 12430235 20275200 1 130560 0 15279165 99.989 4786913 52761 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 12:40:50] CVMFS is ok
[2025-04-12 12:40:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 12:40:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 12:40:50] Further information can be found at the LHC@home message board.
[2025-04-12 12:40:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 12:40:50] Checking for apptainer binary...
[2025-04-12 12:40:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 12:40:50] Running /usr/bin/apptainer --version
[2025-04-12 12:40:50] apptainer version 1.3.2-1.el7
[2025-04-12 12:40:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 12:40:52] c-205-7.aglt2.org
[2025-04-12 12:40:52] apptainer works
[2025-04-12 12:40:52] Set ATHENA_PROC_NUMBER=12
[2025-04-12 12:40:52] Set ATHENA_CORE_NUMBER=12
[2025-04-12 12:40:52] Starting ATLAS job with PandaID=6600414644
[2025-04-12 12:40:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 14:05:37]  *** The last 200 lines of the pilot log: ***
[2025-04-12 14:05:37]  is_tar=False
[2025-04-12 14:05:37]  lfn=log.44075164._041845.job.log.tgz.1
[2025-04-12 14:05:37]  mtime=0
[2025-04-12 14:05:37]  protocol_id=None
[2025-04-12 14:05:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-12 14:05:37]  replicas=None
[2025-04-12 14:05:37]  scope=mc23_13p6TeV
[2025-04-12 14:05:37]  status=None
[2025-04-12 14:05:37]  status_code=0
[2025-04-12 14:05:37]  storage_token=
[2025-04-12 14:05:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6600414644/log.44075164._041845.job.log.tgz.1
[2025-04-12 14:05:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/8b/log.44075164._041845.job.log.tgz.1
[2025-04-12 14:05:37]  workdir=None
[2025-04-12 14:05:37] ]
[2025-04-12 14:05:37] 2025-04-12 18:05:10,254 | INFO     | transferring file log.44075164._041845.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6600414644/log.44075164._041845.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-12 14:05:37] 2025-04-12 18:05:10,254 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6600414644/log.44075164._041845.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075164._041845.job
[2025-04-12 14:05:37] 2025-04-12 18:05:10,277 | INFO     | adding to output.list: log.44075164._041845.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/8b/log.44075164._041845.job.log.tg
[2025-04-12 14:05:37] 2025-04-12 18:05:10,278 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-12 14:05:37] 2025-04-12 18:05:10,278 | INFO     | summary of transferred files:
[2025-04-12 14:05:37] 2025-04-12 18:05:10,278 | INFO     |  -- lfn=log.44075164._041845.job.log.tgz.1, status_code=0, status=transferred
[2025-04-12 14:05:37] 2025-04-12 18:05:10,279 | INFO     | stage-out finished correctly
[2025-04-12 14:05:37] 2025-04-12 18:05:11,198 | WARNING  | process 28331 can no longer be monitored (due to stat problems) - aborting
[2025-04-12 14:05:37] 2025-04-12 18:05:11,198 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6600414644/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 14:05:37] 2025-04-12 18:05:11,286 | INFO     | number of running child processes to parent process 28331: 1
[2025-04-12 14:05:37] 2025-04-12 18:05:11,287 | INFO     | maximum number of monitored processes: 6
[2025-04-12 14:05:37] 2025-04-12 18:05:13,049 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-12 14:05:37] 2025-04-12 18:05:13,134 | INFO     | job 6600414644 has state=finished
[2025-04-12 14:05:37] 2025-04-12 18:05:13,134 | INFO     | preparing for final server update for job 6600414644 in state='finished'
[2025-04-12 14:05:37] 2025-04-12 18:05:13,134 | INFO     | this job has now completed (state=finished)
[2025-04-12 14:05:37] 2025-04-12 18:05:13,135 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-12 14:05:37] 2025-04-12 18:05:13,135 | INFO     | log transfer has been attempted: DONE
[2025-04-12 14:05:37] 2025-04-12 18:05:13,135 | INFO     | job 6600414644 has finished - writing final server update
[2025-04-12 14:05:37] 2025-04-12 18:05:13,135 | INFO     | total number of processed events: 400 (read)
[2025-04-12 14:05:37] 2025-04-12 18:05:13,137 | INFO     | executing command: lscpu
[2025-04-12 14:05:37] 2025-04-12 18:05:13,163 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-12 14:05:37] 2025-04-12 18:05:13,789 | INFO     | monitor loop #377: job 0:6600414644 is in state 'finished'
[2025-04-12 14:05:37] 2025-04-12 18:05:13,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 14:05:37] 2025-04-12 18:05:16,292 | INFO     | monitor loop #378: job 0:6600414644 is in state 'finished'
[2025-04-12 14:05:37] 2025-04-12 18:05:16,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 14:05:37] 2025-04-12 18:05:17,855 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-12 14:05:37] 2025-04-12 18:05:17,855 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6600414644/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 14:05:37] 2025-04-12 18:05:17,856 | INFO     | extracted standard info from prmon json
[2025-04-12 14:05:37] 2025-04-12 18:05:17,857 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 14:05:37] 2025-04-12 18:05:17,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 14:05:37] 2025-04-12 18:05:17,857 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 14:05:37] 2025-04-12 18:05:17,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 14:05:37] 2025-04-12 18:05:17,859 | INFO     | fitting pss+swap vs Time
[2025-04-12 14:05:37] 2025-04-12 18:05:17,860 | INFO     | sum of square deviations: 136095575.0
[2025-04-12 14:05:37] 2025-04-12 18:05:17,860 | INFO     | sum of deviations: 30591987634.000004
[2025-04-12 14:05:37] 2025-04-12 18:05:17,860 | INFO     | mean x: 1744478686.5
[2025-04-12 14:05:37] 2025-04-12 18:05:17,860 | INFO     | mean y: 2779172.3684210526
[2025-04-12 14:05:37] 2025-04-12 18:05:17,860 | INFO     | -- intersect: -392126578488.1181
[2025-04-12 14:05:37] 2025-04-12 18:05:17,861 | INFO     | intersect: -392126578488.1181
[2025-04-12 14:05:37] 2025-04-12 18:05:17,861 | INFO     | chi2: 2.127708656776803
[2025-04-12 14:05:37] 2025-04-12 18:05:17,861 | INFO     | -- intersect: -392126578488.1181
[2025-04-12 14:05:37] 2025-04-12 18:05:17,861 | INFO     | current memory leak: 224.78 B/s (using 76 data points, chi2=2.13)
[2025-04-12 14:05:37] 2025-04-12 18:05:17,862 | INFO     | ..............................
[2025-04-12 14:05:37] 2025-04-12 18:05:17,862 | INFO     | . Timing measurements:
[2025-04-12 14:05:37] 2025-04-12 18:05:17,862 | INFO     | . get job = 0 s
[2025-04-12 14:05:37] 2025-04-12 18:05:17,862 | INFO     | . initial setup = 2 s
[2025-04-12 14:05:37] 2025-04-12 18:05:17,862 | INFO     | . payload setup = 7 s
[2025-04-12 14:05:37] 2025-04-12 18:05:17,862 | INFO     | . stage-in = 0 s
[2025-04-12 14:05:37] 2025-04-12 18:05:17,862 | INFO     | . payload execution = 5017 s
[2025-04-12 14:05:37] 2025-04-12 18:05:17,863 | INFO     | . stage-out = 0 s
[2025-04-12 14:05:37] 2025-04-12 18:05:17,863 | INFO     | . log creation = 0 s
[2025-04-12 14:05:37] 2025-04-12 18:05:17,863 | INFO     | ..............................
[2025-04-12 14:05:37] 2025-04-12 18:05:17,948 | INFO     | 
[2025-04-12 14:05:37] 2025-04-12 18:05:17,948 | INFO     | job summary report
[2025-04-12 14:05:37] 2025-04-12 18:05:17,948 | INFO     | --------------------------------------------------
[2025-04-12 14:05:37] 2025-04-12 18:05:17,948 | INFO     | PanDA job id: 6600414644
[2025-04-12 14:05:37] 2025-04-12 18:05:17,949 | INFO     | task id: 44075164
[2025-04-12 14:05:37] 2025-04-12 18:05:17,949 | INFO     | errors: (none)
[2025-04-12 14:05:37] 2025-04-12 18:05:17,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 14:05:37] 2025-04-12 18:05:17,949 | INFO     | pilot state: finished 
[2025-04-12 14:05:37] 2025-04-12 18:05:17,949 | INFO     | transexitcode: 0
[2025-04-12 14:05:37] 2025-04-12 18:05:17,949 | INFO     | exeerrorcode: 0
[2025-04-12 14:05:37] 2025-04-12 18:05:17,950 | INFO     | exeerrordiag: 
[2025-04-12 14:05:37] 2025-04-12 18:05:17,950 | INFO     | exitcode: 0
[2025-04-12 14:05:37] 2025-04-12 18:05:17,950 | INFO     | exitmsg: OK
[2025-04-12 14:05:37] 2025-04-12 18:05:17,950 | INFO     | cpuconsumptiontime: 47212 s
[2025-04-12 14:05:37] 2025-04-12 18:05:17,950 | INFO     | nevents: 400
[2025-04-12 14:05:37] 2025-04-12 18:05:17,950 | INFO     | neventsw: 0
[2025-04-12 14:05:37] 2025-04-12 18:05:17,951 | INFO     | pid: 28331
[2025-04-12 14:05:37] 2025-04-12 18:05:17,951 | INFO     | pgrp: 28331
[2025-04-12 14:05:37] 2025-04-12 18:05:17,951 | INFO     | corecount: 12
[2025-04-12 14:05:37] 2025-04-12 18:05:17,951 | INFO     | event service: False
[2025-04-12 14:05:37] 2025-04-12 18:05:17,951 | INFO     | sizes: {0: 2417276, 5: 2417482, 11: 2417538, 5028: 2452622, 5031: 2452622, 5036: 2452792}
[2025-04-12 14:05:37] 2025-04-12 18:05:17,951 | INFO     | --------------------------------------------------
[2025-04-12 14:05:37] 2025-04-12 18:05:17,951 | INFO     | 
[2025-04-12 14:05:37] 2025-04-12 18:05:17,952 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-12 14:05:37] 2025-04-12 18:05:17,977 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,977 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,977 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,978 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,978 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,978 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,980 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 14:05:37] 2025-04-12 18:05:17,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,980 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 14:05:37] 2025-04-12 18:05:17,981 | INFO     | job 6600414644 has completed (purged errors)
[2025-04-12 14:05:37] 2025-04-12 18:05:17,981 | INFO     | overall cleanup function is called
[2025-04-12 14:05:37] 2025-04-12 18:05:18,989 | INFO     | --- collectZombieJob: --- 10, [28331]
[2025-04-12 14:05:37] 2025-04-12 18:05:18,989 | INFO     | zombie collector waiting for pid 28331
[2025-04-12 14:05:37] 2025-04-12 18:05:18,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 14:05:37] 2025-04-12 18:05:18,989 | INFO     | collected zombie processes
[2025-04-12 14:05:37] 2025-04-12 18:05:18,990 | INFO     | will attempt to kill all subprocesses of pid=28331
[2025-04-12 14:05:37] 2025-04-12 18:05:19,080 | INFO     | process IDs to be killed: [28331] (in reverse order)
[2025-04-12 14:05:37] 2025-04-12 18:05:19,135 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 14:05:37] 2025-04-12 18:05:19,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 14:05:37] 2025-04-12 18:05:19,138 | INFO     | did not find any defunct processes belonging to 28331
[2025-04-12 14:05:37] 2025-04-12 18:05:19,140 | INFO     | did not find any defunct processes belonging to 28331
[2025-04-12 14:05:37] 2025-04-12 18:05:19,140 | INFO     | ready for new job
[2025-04-12 14:05:37] 2025-04-12 18:05:19,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 14:05:37] 2025-04-12 18:05:19,141 | INFO     | **************************************
[2025-04-12 14:05:37] 2025-04-12 18:05:19,142 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 14:05:37] 2025-04-12 18:05:19,142 | INFO     | **************************************
[2025-04-12 14:05:37] 2025-04-12 18:05:19,142 | INFO     | 
[2025-04-12 14:05:37] 2025-04-12 18:05:19,142 | INFO     | architecture information:
[2025-04-12 14:05:37] 2025-04-12 18:05:19,143 | INFO     | executing command: cat /etc/os-release
[2025-04-12 14:05:37] 2025-04-12 18:05:19,157 | INFO     | cat /etc/os-release:
[2025-04-12 14:05:37] NAME="CentOS Linux"
[2025-04-12 14:05:37] VERSION="7 (Core)"
[2025-04-12 14:05:37] ID="centos"
[2025-04-12 14:05:37] ID_LIKE="rhel fedora"
[2025-04-12 14:05:37] VERSION_ID="7"
[2025-04-12 14:05:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 14:05:37] ANSI_COLOR="0;31"
[2025-04-12 14:05:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 14:05:37] HOME_URL="https://www.centos.org/"
[2025-04-12 14:05:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 14:05:37] 
[2025-04-12 14:05:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 14:05:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 14:05:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 14:05:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 14:05:37] 
[2025-04-12 14:05:37] 2025-04-12 18:05:19,158 | INFO     | **************************************
[2025-04-12 14:05:37] 2025-04-12 18:05:19,661 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-12 14:05:37] 2025-04-12 18:05:19,678 | INFO     | sufficient remaining disk space (29396828160 B)
[2025-04-12 14:05:37] 2025-04-12 18:05:19,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 14:05:37] 2025-04-12 18:05:19,678 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 14:05:37] 2025-04-12 18:05:19,679 | INFO     | update_server=False
[2025-04-12 14:05:37] 2025-04-12 18:05:19,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 14:05:37] 2025-04-12 18:05:19,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 14:05:37] 2025-04-12 18:05:19,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 14:05:37] 2025-04-12 18:05:19,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 14:05:37] 2025-04-12 18:05:19,800 | INFO     | aborting loop
[2025-04-12 14:05:37] 2025-04-12 18:05:20,247 | INFO     | all payload control threads have been joined
[2025-04-12 14:05:37] 2025-04-12 18:05:20,616 | INFO     | PID=21957 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-12 14:05:37] 2025-04-12 18:05:20,616 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 14:05:37] 2025-04-12 18:05:20,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 14:05:37] 2025-04-12 18:05:20,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 14:05:37] 2025-04-12 18:05:20,675 | INFO     | all data control threads have been joined
[2025-04-12 14:05:37] 2025-04-12 18:05:20,684 | INFO     | [job] retrieve thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:20,685 | INFO     | [job] queue monitor thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:20,806 | INFO     | [job] job monitor thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:20,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 14:05:37] 2025-04-12 18:05:20,944 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:21,002 | INFO     | [job] validate thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:21,196 | INFO     | all job control threads have been joined
[2025-04-12 14:05:37] 2025-04-12 18:05:21,253 | INFO     | [payload] control thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:21,281 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:21,476 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:21,680 | INFO     | [data] control thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:21,729 | INFO     | [payload] validate_post thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:22,076 | INFO     | [data] copytool_in thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:22,202 | INFO     | [job] control thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:22,216 | INFO     | [payload] failed_post thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:22,889 | INFO     | [data] copytool_out thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:23,686 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:30,359 | INFO     | job.realtimelogging is not enabled
[2025-04-12 14:05:37] 2025-04-12 18:05:31,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 14:05:37] 2025-04-12 18:05:32,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724629038912)>', '<ExcThread(monitor, started 139724186437376)>']
[2025-04-12 14:05:37] 2025-04-12 18:05:32,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 14:05:37] 2025-04-12 18:05:32,684 | INFO     | [monitor] control thread has ended
[2025-04-12 14:05:37] 2025-04-12 18:05:37,270 | INFO     | all workflow threads have been joined
[2025-04-12 14:05:37] 2025-04-12 18:05:37,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 14:05:37] 2025-04-12 18:05:37,270 | INFO     | traces error code: 0
[2025-04-12 14:05:37] 2025-04-12 18:05:37,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 14:05:37] 2025-04-12 18:05:37,357 [wrapper] ==== pilot stdout END ====
[2025-04-12 14:05:37] 2025-04-12 18:05:37,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 14:05:37] 2025-04-12 18:05:37,365 [wrapper] pilotpid: 21957
[2025-04-12 14:05:37] 2025-04-12 18:05:37,368 [wrapper] Pilot exit status: 0
[2025-04-12 14:05:37] 2025-04-12 18:05:37,384 [wrapper] pandaids: 6600414644
[2025-04-12 14:05:37] 2025-04-12 18:05:37,422 [wrapper] cleanup supervisor_pilot 18186 21958
[2025-04-12 14:05:37] 2025-04-12 18:05:37,426 [wrapper] Test setup, not cleaning
[2025-04-12 14:05:37] 2025-04-12 18:05:37,430 [wrapper] apfmon messages muted
[2025-04-12 14:05:37] 2025-04-12 18:05:37,434 [wrapper] ==== wrapper stdout END ====
[2025-04-12 14:05:37] 2025-04-12 18:05:37,437 [wrapper] ==== wrapper stderr END ====
[2025-04-12 14:05:37]  *** Error codes and diagnostics ***
[2025-04-12 14:05:37]     "exeErrorCode": 0,
[2025-04-12 14:05:37]     "exeErrorDiag": "",
[2025-04-12 14:05:37]     "pilotErrorCode": 0,
[2025-04-12 14:05:37]     "pilotErrorDiag": "",
[2025-04-12 14:05:37]  *** Listing of results directory ***
[2025-04-12 14:05:37] total 413420
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas    495897 Apr 12 03:58 pilot3.tar.gz
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 04:16 queuedata.json
[2025-04-12 14:05:37] -rwx------ 1 boincer umatlas     37140 Apr 12 04:17 runpilot2-wrapper.sh
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas       100 Apr 12 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 14:05:37] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 12:40 run_atlas
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas       105 Apr 12 12:40 job.xml
[2025-04-12 14:05:37] -rw-r--r-- 2 boincer umatlas 222719509 Apr 12 12:40 EVNT.44075162._001622.pool.root.1
[2025-04-12 14:05:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 12:40 start_atlas.sh
[2025-04-12 14:05:37] drwxrwx--x 2 boincer umatlas      4096 Apr 12 12:40 shared
[2025-04-12 14:05:37] -rw-r--r-- 2 boincer umatlas    508886 Apr 12 12:40 input.tar.gz
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas         0 Apr 12 12:40 boinc_lockfile
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas      2549 Apr 12 12:40 pandaJob.out
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas       424 Apr 12 12:40 setup.sh.local
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas    986068 Apr 12 12:41 agis_schedconf.cvmfs.json
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas   1603529 Apr 12 12:41 agis_ddmendpoints.agis.ALL.json
[2025-04-12 14:05:37] drwx------ 4 boincer umatlas      4096 Apr 12 12:41 pilot3
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas      5867 Apr 12 14:04 init_data.xml
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas 195105966 Apr 12 14:04 HITS.44075164._041845.pool.root.1
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas       529 Apr 12 14:04 boinc_task_state.xml
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas      1039 Apr 12 14:05 memory_monitor_summary.json
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas        95 Apr 12 14:05 pilot_heartbeat.json
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas    362939 Apr 12 14:05 log.44075164._041845.job.log.tgz.1
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas      7733 Apr 12 14:05 heartbeat.json
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas      8192 Apr 12 14:05 boinc_mmap_file
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas        27 Apr 12 14:05 wrapper_checkpoint.txt
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas      4742 Apr 12 14:05 pilotlog.txt
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas    478637 Apr 12 14:05 log.44075164._041845.job.log.1
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas       357 Apr 12 14:05 output.list
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas       620 Apr 12 14:05 runtime_log
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas    860160 Apr 12 14:05 result.tar.gz
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas     11010 Apr 12 14:05 runtime_log.err
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas       654 Apr 12 14:05 p2bMDmwElN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmaAyKDmCmJ7un.diag
[2025-04-12 14:05:37] -rw-r--r-- 1 boincer umatlas     21543 Apr 12 14:05 stderr.txt
[2025-04-12 14:05:37] HITS file was successfully produced:
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas 195105966 Apr 12 14:04 shared/HITS.pool.root.1
[2025-04-12 14:05:37]  *** Contents of shared directory: ***
[2025-04-12 14:05:37] total 409396
[2025-04-12 14:05:37] -rw-r--r-- 2 boincer umatlas 222719509 Apr 12 12:40 ATLAS.root_0
[2025-04-12 14:05:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 12:40 start_atlas.sh
[2025-04-12 14:05:37] -rw-r--r-- 2 boincer umatlas    508886 Apr 12 12:40 input.tar.gz
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas 195105966 Apr 12 14:04 HITS.pool.root.1
[2025-04-12 14:05:37] -rw------- 1 boincer umatlas    860160 Apr 12 14:05 result.tar.gz
14:05:39 (18314): run_atlas exited; CPU time 47201.604554
14:05:39 (18314): called boinc_finish(0)

</stderr_txt>
]]>

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