Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:44:13 (2283892): wrapper (7.7.26015): starting
11:44:13 (2283892): wrapper: running run_atlas (--nthreads 8)
[2025-04-12 11:44:13] Arguments: --nthreads 8
[2025-04-12 11:44:13] Threads: 8
[2025-04-12 11:44:13] Checking for CVMFS
[2025-04-12 11:44:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 11:44:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 11:44:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 11:44:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 11:44:16] 2.12.6.0 723137 14504 287084 144776 0 869 24624874 32935937 25405 16776704 0 57864672 99.593 62293668 20744 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-12 11:44:16] CVMFS is ok
[2025-04-12 11:44:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 11:44:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 11:44:16] Further information can be found at the LHC@home message board.
[2025-04-12 11:44:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 11:44:16] Checking for apptainer binary...
[2025-04-12 11:44:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 11:44:16] Running /usr/bin/apptainer --version
[2025-04-12 11:44:16] apptainer version 1.4.0-1.el9
[2025-04-12 11:44:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 11:44:17] c6-6-8-3.aglt2.org
[2025-04-12 11:44:17] apptainer works
[2025-04-12 11:44:17] Set ATHENA_PROC_NUMBER=8
[2025-04-12 11:44:17] Set ATHENA_CORE_NUMBER=8
[2025-04-12 11:44:17] Starting ATLAS job with PandaID=6600393443
[2025-04-12 11:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 19:47:00]  *** The last 200 lines of the pilot log: ***
[2025-04-12 19:47:01] 2025-04-12 23:46:40,427 | INFO     | -- intersect: -22035816973.670475
[2025-04-12 19:47:01] 2025-04-12 23:46:40,427 | INFO     | intersect: -22035816973.670475
[2025-04-12 19:47:01] 2025-04-12 23:46:40,428 | INFO     | chi2: 8.072943850248393
[2025-04-12 19:47:01] 2025-04-12 23:46:40,428 | INFO     | current chi2=8.072943850248393 (change=7.649389068033506 %)
[2025-04-12 19:47:01] 2025-04-12 23:46:40,428 | INFO     | right removable region: 464
[2025-04-12 19:47:01] 2025-04-12 23:46:40,429 | INFO     | sum of square deviations: 31175548601.79801
[2025-04-12 19:47:01] 2025-04-12 23:46:40,434 | INFO     | sum of deviations: 224708645075.4565
[2025-04-12 19:47:01] 2025-04-12 23:46:40,434 | INFO     | mean x: 1744487346.5978494
[2025-04-12 19:47:01] 2025-04-12 23:46:40,434 | INFO     | mean y: 2449468.0559139787
[2025-04-12 19:47:01] 2025-04-12 23:46:40,434 | INFO     | -- intersect: -12571551811.352938
[2025-04-12 19:47:01] 2025-04-12 23:46:40,434 | INFO     | intersect: -12571551811.352938
[2025-04-12 19:47:01] 2025-04-12 23:46:40,435 | INFO     | chi2: 5.012995215194765
[2025-04-12 19:47:01] 2025-04-12 23:46:40,435 | INFO     | current chi2=5.012995215194765 (change=42.653735823021115 %)
[2025-04-12 19:47:01] 2025-04-12 23:46:40,436 | INFO     | sum of square deviations: 30180524224.991245
[2025-04-12 19:47:01] 2025-04-12 23:46:40,441 | INFO     | sum of deviations: 117574300909.46962
[2025-04-12 19:47:01] 2025-04-12 23:46:40,441 | INFO     | mean x: 1744487499.104348
[2025-04-12 19:47:01] 2025-04-12 23:46:40,441 | INFO     | mean y: 2465883.8652173914
[2025-04-12 19:47:01] 2025-04-12 23:46:40,441 | INFO     | -- intersect: -6793535955.713903
[2025-04-12 19:47:01] 2025-04-12 23:46:40,441 | INFO     | intersect: -6793535955.713903
[2025-04-12 19:47:01] 2025-04-12 23:46:40,442 | INFO     | chi2: 3.040366886235528
[2025-04-12 19:47:01] 2025-04-12 23:46:40,442 | INFO     | current chi2=3.040366886235528 (change=39.35029347285336 %)
[2025-04-12 19:47:01] 2025-04-12 23:46:40,443 | INFO     | sum of square deviations: 29206979656.791275
[2025-04-12 19:47:01] 2025-04-12 23:46:40,447 | INFO     | sum of deviations: 18339086648.340603
[2025-04-12 19:47:01] 2025-04-12 23:46:40,447 | INFO     | mean x: 1744487651.6043956
[2025-04-12 19:47:01] 2025-04-12 23:46:40,448 | INFO     | mean y: 2481428.5296703298
[2025-04-12 19:47:01] 2025-04-12 23:46:40,448 | INFO     | -- intersect: -1092883808.6729481
[2025-04-12 19:47:01] 2025-04-12 23:46:40,448 | INFO     | intersect: -1092883808.6729481
[2025-04-12 19:47:01] 2025-04-12 23:46:40,448 | INFO     | chi2: 1.3670524422983696
[2025-04-12 19:47:01] 2025-04-12 23:46:40,448 | INFO     | current chi2=1.3670524422983696 (change=55.03659612636407 %)
[2025-04-12 19:47:01] 2025-04-12 23:46:40,449 | INFO     | sum of square deviations: 28254598032.09109
[2025-04-12 19:47:01] 2025-04-12 23:46:40,454 | INFO     | sum of deviations: -31761941257.422222
[2025-04-12 19:47:01] 2025-04-12 23:46:40,454 | INFO     | mean x: 1744487804.1044445
[2025-04-12 19:47:01] 2025-04-12 23:46:40,454 | INFO     | mean y: 2489440.711111111
[2025-04-12 19:47:01] 2025-04-12 23:46:40,454 | INFO     | -- intersect: 1963526688.3591938
[2025-04-12 19:47:01] 2025-04-12 23:46:40,454 | INFO     | intersect: 1963526688.3591938
[2025-04-12 19:47:01] 2025-04-12 23:46:40,455 | INFO     | chi2: 0.9153793715574804
[2025-04-12 19:47:01] 2025-04-12 23:46:40,455 | INFO     | current chi2=0.9153793715574804 (change=33.03992273928495 %)
[2025-04-12 19:47:01] 2025-04-12 23:46:40,456 | INFO     | sum of square deviations: 27323175092.597622
[2025-04-12 19:47:01] 2025-04-12 23:46:40,460 | INFO     | sum of deviations: -58393403452.06743
[2025-04-12 19:47:01] 2025-04-12 23:46:40,461 | INFO     | mean x: 1744487956.6022472
[2025-04-12 19:47:01] 2025-04-12 23:46:40,461 | INFO     | mean y: 2493796.0674157306
[2025-04-12 19:47:01] 2025-04-12 23:46:40,461 | INFO     | -- intersect: 3730705789.0705767
[2025-04-12 19:47:01] 2025-04-12 23:46:40,461 | INFO     | intersect: 3730705789.0705767
[2025-04-12 19:47:01] 2025-04-12 23:46:40,461 | INFO     | chi2: 0.779793247148669
[2025-04-12 19:47:01] 2025-04-12 23:46:40,462 | INFO     | current chi2=0.779793247148669 (change=14.812014408639898 %)
[2025-04-12 19:47:01] 2025-04-12 23:46:40,462 | INFO     | left removable region: 50
[2025-04-12 19:47:01] 2025-04-12 23:46:40,462 | INFO     | sum of square deviations: 22001125621.66422
[2025-04-12 19:47:01] 2025-04-12 23:46:40,466 | INFO     | sum of deviations: -41634706613.14982
[2025-04-12 19:47:01] 2025-04-12 23:46:40,467 | INFO     | mean x: 1744488536.1135266
[2025-04-12 19:47:01] 2025-04-12 23:46:40,467 | INFO     | mean y: 2500558.7053140095
[2025-04-12 19:47:01] 2025-04-12 23:46:40,467 | INFO     | -- intersect: 3303752941.8820567
[2025-04-12 19:47:01] 2025-04-12 23:46:40,467 | INFO     | intersect: 3303752941.8820567
[2025-04-12 19:47:01] 2025-04-12 23:46:40,468 | INFO     | chi2: 0.022300806520914818
[2025-04-12 19:47:01] 2025-04-12 23:46:40,468 | INFO     | -- intersect: 3303752941.8820567
[2025-04-12 19:47:01] 2025-04-12 23:46:40,468 | INFO     | current memory leak: -1.89 B/s (using 414 data points, chi2=0.02)
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | ..............................
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | . Timing measurements:
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | . get job = 0 s
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | . initial setup = 8 s
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | . payload setup = 49 s
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | . stage-in = 0 s
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | . payload execution = 28684 s
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | . stage-out = 8 s
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | . log creation = 1 s
[2025-04-12 19:47:01] 2025-04-12 23:46:40,469 | INFO     | ..............................
[2025-04-12 19:47:01] 2025-04-12 23:46:41,010 | INFO     | 
[2025-04-12 19:47:01] 2025-04-12 23:46:41,011 | INFO     | job summary report
[2025-04-12 19:47:01] 2025-04-12 23:46:41,011 | INFO     | --------------------------------------------------
[2025-04-12 19:47:01] 2025-04-12 23:46:41,011 | INFO     | PanDA job id: 6600393443
[2025-04-12 19:47:01] 2025-04-12 23:46:41,011 | INFO     | task id: 44075164
[2025-04-12 19:47:01] 2025-04-12 23:46:41,011 | INFO     | errors: (none)
[2025-04-12 19:47:01] 2025-04-12 23:46:41,011 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 19:47:01] 2025-04-12 23:46:41,011 | INFO     | pilot state: finished 
[2025-04-12 19:47:01] 2025-04-12 23:46:41,011 | INFO     | transexitcode: 0
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | exeerrorcode: 0
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | exeerrordiag: 
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | exitcode: 0
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | exitmsg: OK
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | cpuconsumptiontime: 44487 s
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | nevents: 400
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | neventsw: 0
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | pid: 2308503
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | pgrp: 2308503
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | corecount: 8
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | event service: False
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | sizes: {0: 2416442, 1: 2417043, 2: 2417155, 3: 2417354, 4: 2417354, 16: 2417382, 27: 2417538, 38: 2417800, 50: 2417800, 28738: 2454142, 28739: 2454141, 28749: 2463
[2025-04-12 19:47:01] 2025-04-12 23:46:41,012 | INFO     | --------------------------------------------------
[2025-04-12 19:47:01] 2025-04-12 23:46:41,013 | INFO     | 
[2025-04-12 19:47:01] 2025-04-12 23:46:41,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-12 19:47:01] 2025-04-12 23:46:41,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 19:47:01] 2025-04-12 23:46:41,139 | INFO     | job 6600393443 has completed (purged errors)
[2025-04-12 19:47:01] 2025-04-12 23:46:41,140 | INFO     | overall cleanup function is called
[2025-04-12 19:47:01] 2025-04-12 23:46:42,152 | INFO     | --- collectZombieJob: --- 10, [2308503]
[2025-04-12 19:47:01] 2025-04-12 23:46:42,153 | INFO     | zombie collector waiting for pid 2308503
[2025-04-12 19:47:01] 2025-04-12 23:46:42,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 19:47:01] 2025-04-12 23:46:42,153 | INFO     | collected zombie processes
[2025-04-12 19:47:01] 2025-04-12 23:46:42,153 | INFO     | will attempt to kill all subprocesses of pid=2308503
[2025-04-12 19:47:01] 2025-04-12 23:46:44,753 | INFO     | process IDs to be killed: [2308503] (in reverse order)
[2025-04-12 19:47:01] 2025-04-12 23:46:45,394 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 19:47:01] 2025-04-12 23:46:45,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 19:47:01] 2025-04-12 23:46:45,572 | INFO     | did not find any defunct processes belonging to 2308503
[2025-04-12 19:47:01] 2025-04-12 23:46:45,648 | INFO     | did not find any defunct processes belonging to 2308503
[2025-04-12 19:47:01] 2025-04-12 23:46:45,648 | INFO     | ready for new job
[2025-04-12 19:47:01] 2025-04-12 23:46:45,648 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 19:47:01] 2025-04-12 23:46:45,650 | INFO     | **************************************
[2025-04-12 19:47:01] 2025-04-12 23:46:45,650 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 19:47:01] 2025-04-12 23:46:45,650 | INFO     | **************************************
[2025-04-12 19:47:01] 2025-04-12 23:46:45,650 | INFO     | 
[2025-04-12 19:47:01] 2025-04-12 23:46:45,729 | INFO     | architecture information:
[2025-04-12 19:47:01] 2025-04-12 23:46:45,765 | INFO     | executing command: cat /etc/os-release
[2025-04-12 19:47:01] 2025-04-12 23:46:45,898 | INFO     | cat /etc/os-release:
[2025-04-12 19:47:01] NAME="CentOS Linux"
[2025-04-12 19:47:01] VERSION="7 (Core)"
[2025-04-12 19:47:01] ID="centos"
[2025-04-12 19:47:01] ID_LIKE="rhel fedora"
[2025-04-12 19:47:01] VERSION_ID="7"
[2025-04-12 19:47:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 19:47:01] ANSI_COLOR="0;31"
[2025-04-12 19:47:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 19:47:01] HOME_URL="https://www.centos.org/"
[2025-04-12 19:47:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 19:47:01] 
[2025-04-12 19:47:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 19:47:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 19:47:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 19:47:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 19:47:01] 
[2025-04-12 19:47:01] 2025-04-12 23:46:45,898 | INFO     | **************************************
[2025-04-12 19:47:01] 2025-04-12 23:46:46,039 | INFO     | PID=2291440 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-12 19:47:01] 2025-04-12 23:46:46,044 | INFO     | .. there are 25 such processes running
[2025-04-12 19:47:01] 2025-04-12 23:46:46,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-12 19:47:01] 2025-04-12 23:46:46,548 | INFO     | sufficient remaining disk space (93244620800 B)
[2025-04-12 19:47:01] 2025-04-12 23:46:46,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 19:47:01] 2025-04-12 23:46:46,549 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 19:47:01] 2025-04-12 23:46:46,549 | INFO     | update_server=False
[2025-04-12 19:47:01] 2025-04-12 23:46:46,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 19:47:01] 2025-04-12 23:46:46,549 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 19:47:01] 2025-04-12 23:46:46,550 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 19:47:01] 2025-04-12 23:46:46,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 19:47:01] 2025-04-12 23:46:46,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 19:47:01] 2025-04-12 23:46:46,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 19:47:01] 2025-04-12 23:46:46,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 19:47:01] 2025-04-12 23:46:47,061 | INFO     | all payload control threads have been joined
[2025-04-12 19:47:01] 2025-04-12 23:46:47,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 19:47:01] 2025-04-12 23:46:47,124 | INFO     | aborting loop
[2025-04-12 19:47:01] 2025-04-12 23:46:47,186 | INFO     | all data control threads have been joined
[2025-04-12 19:47:01] 2025-04-12 23:46:47,373 | INFO     | all job control threads have been joined
[2025-04-12 19:47:01] 2025-04-12 23:46:47,555 | INFO     | [job] retrieve thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:47,567 | INFO     | [job] queue monitor thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:47,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 19:47:01] 2025-04-12 23:46:47,727 | INFO     | [payload] failed_post thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,069 | INFO     | [payload] control thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,082 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,090 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,130 | INFO     | [job] job monitor thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,145 | INFO     | [payload] validate_post thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,192 | INFO     | [data] control thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,244 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,379 | INFO     | [job] control thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,488 | INFO     | [data] copytool_in thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,567 | INFO     | [data] copytool_out thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:48,982 | INFO     | [job] validate thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:49,006 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:51,643 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 19:47:01] 2025-04-12 23:46:53,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597317826368)>', '<ExcThread(monitor, started 140596526167808)>']
[2025-04-12 19:47:01] 2025-04-12 23:46:53,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 19:47:01] 2025-04-12 23:46:53,613 | INFO     | [monitor] control thread has ended
[2025-04-12 19:47:01] 2025-04-12 23:46:58,552 | INFO     | all workflow threads have been joined
[2025-04-12 19:47:01] 2025-04-12 23:46:58,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 19:47:01] 2025-04-12 23:46:58,553 | INFO     | traces error code: 0
[2025-04-12 19:47:01] 2025-04-12 23:46:58,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 19:47:01] 2025-04-12 23:46:59,296 [wrapper] ==== pilot stdout END ====
[2025-04-12 19:47:01] 2025-04-12 23:46:59,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 19:47:01] 2025-04-12 23:46:59,483 [wrapper] pilotpid: 2291440
[2025-04-12 19:47:01] 2025-04-12 23:46:59,614 [wrapper] Pilot exit status: 0
[2025-04-12 19:47:01] 2025-04-12 23:46:59,775 [wrapper] pandaids: 6600393443
[2025-04-12 19:47:01] 2025-04-12 23:47:00,137 [wrapper] cleanup supervisor_pilot 4106358 2291441
[2025-04-12 19:47:01] 2025-04-12 23:47:00,159 [wrapper] Test setup, not cleaning
[2025-04-12 19:47:01] 2025-04-12 23:47:00,199 [wrapper] apfmon messages muted
[2025-04-12 19:47:01] 2025-04-12 23:47:00,211 [wrapper] ==== wrapper stdout END ====
[2025-04-12 19:47:01] 2025-04-12 23:47:00,294 [wrapper] ==== wrapper stderr END ====
[2025-04-12 19:47:01]  *** Error codes and diagnostics ***
[2025-04-12 19:47:01]     "exeErrorCode": 0,
[2025-04-12 19:47:01]     "exeErrorDiag": "",
[2025-04-12 19:47:01]     "pilotErrorCode": 0,
[2025-04-12 19:47:01]     "pilotErrorDiag": "",
[2025-04-12 19:47:01]  *** Listing of results directory ***
[2025-04-12 19:47:01] total 408232
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas    495897 Apr 12 00:31 pilot3.tar.gz
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas      5111 Apr 12 00:51 queuedata.json
[2025-04-12 19:47:01] -rwx------. 1 boincer umatlas     37140 Apr 12 00:53 runpilot2-wrapper.sh
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas       100 Apr 12 11:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 19:47:01] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 12 11:44 run_atlas
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas       105 Apr 12 11:44 job.xml
[2025-04-12 19:47:01] -rw-r--r--. 2 boincer umatlas 219833782 Apr 12 11:44 EVNT.44075162._001536.pool.root.1
[2025-04-12 19:47:01] -rw-r--r--. 2 boincer umatlas     17569 Apr 12 11:44 start_atlas.sh
[2025-04-12 19:47:01] drwxrwx--x. 2 boincer umatlas      4096 Apr 12 11:44 shared
[2025-04-12 19:47:01] -rw-r--r--. 2 boincer umatlas    508883 Apr 12 11:44 input.tar.gz
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas         0 Apr 12 11:44 boinc_lockfile
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas      2546 Apr 12 11:44 pandaJob.out
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas       467 Apr 12 11:44 setup.sh.local
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas    986068 Apr 12 11:45 agis_schedconf.cvmfs.json
[2025-04-12 19:47:01] drwx------. 4 boincer umatlas      4096 Apr 12 11:45 pilot3
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas 188773319 Apr 12 19:44 HITS.44075164._039681.pool.root.1
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas       531 Apr 12 19:44 boinc_task_state.xml
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas      1054 Apr 12 19:45 memory_monitor_summary.json
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas   1603529 Apr 12 19:45 agis_ddmendpoints.agis.ALL.json
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas    500582 Apr 12 19:45 log.44075164._039681.job.log.tgz.1
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas        95 Apr 12 19:46 pilot_heartbeat.json
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas      7739 Apr 12 19:46 heartbeat.json
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas      6857 Apr 12 19:46 init_data.xml
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas      8192 Apr 12 19:46 boinc_mmap_file
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas        28 Apr 12 19:46 wrapper_checkpoint.txt
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas      4871 Apr 12 19:46 pilotlog.txt
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas   2292020 Apr 12 19:47 log.44075164._039681.job.log.1
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas       357 Apr 12 19:47 output.list
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas       620 Apr 12 19:47 runtime_log
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas   2816000 Apr 12 19:47 result.tar.gz
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas     11419 Apr 12 19:47 runtime_log.err
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas       662 Apr 12 19:47 aMQODml2hN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmncQLDmxOcQRo.diag
[2025-04-12 19:47:01] -rw-r--r--. 1 boincer umatlas     11830 Apr 12 19:47 stderr.txt
[2025-04-12 19:47:01] HITS file was successfully produced:
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas 188773319 Apr 12 19:44 shared/HITS.pool.root.1
[2025-04-12 19:47:01]  *** Contents of shared directory: ***
[2025-04-12 19:47:01] total 402312
[2025-04-12 19:47:01] -rw-r--r--. 2 boincer umatlas 219833782 Apr 12 11:44 ATLAS.root_0
[2025-04-12 19:47:01] -rw-r--r--. 2 boincer umatlas     17569 Apr 12 11:44 start_atlas.sh
[2025-04-12 19:47:01] -rw-r--r--. 2 boincer umatlas    508883 Apr 12 11:44 input.tar.gz
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas 188773319 Apr 12 19:44 HITS.pool.root.1
[2025-04-12 19:47:01] -rw-------. 1 boincer umatlas   2816000 Apr 12 19:47 result.tar.gz
19:47:02 (2283892): run_atlas exited; CPU time 45780.518454
19:47:02 (2283892): called boinc_finish(0)

</stderr_txt>
]]>

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