Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-13 18:23:15 (9824): Detected: vboxwrapper 26206
2025-04-13 18:23:15 (9824): Detected: BOINC client v8.0.2
2025-04-13 18:23:16 (9824): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-04-13 18:23:16 (9824): Successfully copied 'init_data.xml' to the shared directory.
2025-04-13 18:23:17 (9824): Create VM. (boinc_0a3311501295741d, slot#0)
2025-04-13 18:23:17 (9824): Setting Memory Size for VM. (4200MB)
2025-04-13 18:23:17 (9824): Setting CPU Count for VM. (2)
2025-04-13 18:23:18 (9824): Setting Chipset Options for VM.
2025-04-13 18:23:18 (9824): Setting Graphics Controller Options for VM.
2025-04-13 18:23:18 (9824): Setting Boot Options for VM.
2025-04-13 18:23:18 (9824): Setting Network Configuration for NAT.
2025-04-13 18:23:19 (9824): Enabling VM Network Access.
2025-04-13 18:23:19 (9824): Disabling USB Support for VM.
2025-04-13 18:23:19 (9824): Disabling COM Port Support for VM.
2025-04-13 18:23:20 (9824): Disabling LPT Port Support for VM.
2025-04-13 18:23:20 (9824): Disabling Audio Support for VM.
2025-04-13 18:23:20 (9824): Disabling Clipboard Support for VM.
2025-04-13 18:23:20 (9824): Disabling Drag and Drop Support for VM.
2025-04-13 18:23:21 (9824): Adding storage controller(s) to VM.
2025-04-13 18:23:21 (9824): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-13 18:23:22 (9824): Adding VirtualBox Guest Additions to VM.
2025-04-13 18:23:22 (9824): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-13 18:23:22 (9824): forwarding host port 59176 to guest port 80
2025-04-13 18:23:23 (9824): Enabling remote desktop for VM.
2025-04-13 18:23:23 (9824): Enabling shared directory for VM.
2025-04-13 18:23:24 (9824): Starting VM using VBoxManage interface. (boinc_0a3311501295741d, slot#0)
2025-04-13 18:23:29 (9824): Successfully started VM. (PID = '424')
2025-04-13 18:23:29 (9824): Reporting VM Process ID to BOINC.
2025-04-13 18:23:29 (9824): Guest Log: BIOS: VirtualBox 6.1.36
2025-04-13 18:23:29 (9824): Guest Log: CPUID EDX: 0x178bfbff
2025-04-13 18:23:29 (9824): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-13 18:23:29 (9824): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-13 18:23:29 (9824): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-13 18:23:29 (9824): Detected: Web Application Enabled (http://localhost:59176)
2025-04-13 18:23:29 (9824): Detected: Remote Desktop Enabled (localhost:59177)
2025-04-13 18:23:29 (9824): Preference change detected
2025-04-13 18:23:29 (9824): Setting CPU throttle for VM. (100%)
2025-04-13 18:23:29 (9824): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-13 18:23:31 (9824): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-13 18:23:31 (9824): Guest Log: BIOS: Booting from Hard Disk...
2025-04-13 18:23:34 (9824): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-13 18:23:34 (9824): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-13 18:23:34 (9824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-13 18:23:39 (9824): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-13 18:23:39 (9824): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-13 18:23:46 (9824): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-13 18:23:46 (9824): Guest Log: 00:00:00.000200 main     Log opened 2025-04-13T18:23:44.346546000Z
2025-04-13 18:23:46 (9824): Guest Log: 00:00:00.000371 main     OS Product: Linux
2025-04-13 18:23:46 (9824): Guest Log: 00:00:00.000436 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-13 18:23:46 (9824): Guest Log: 00:00:00.000480 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-13 18:23:46 (9824): Guest Log: 00:00:00.000523 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-13 18:23:46 (9824): Guest Log: 00:00:00.000524 main     Process ID: 1261
2025-04-13 18:23:46 (9824): Guest Log: 00:00:00.000524 main     Package type: LINUX_64BITS_GENERIC
2025-04-13 18:23:46 (9824): Guest Log: 00:00:00.001395 main     5.2.32 r132073 started. Verbose level = 0
2025-04-13 18:23:46 (9824): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-13 18:23:46 (9824): Guest Log: [INFO] Mounting shared directory
2025-04-13 18:23:46 (9824): Guest Log: [INFO] Checking for init_data.xml
2025-04-13 18:23:49 (9824): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-13 18:23:49 (9824): Guest Log: [INFO] Detected branch: prod
2025-04-13 18:23:49 (9824): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-13 18:23:49 (9824): Guest Log: Copying input files
2025-04-13 18:23:51 (9824): Guest Log: Copied input files into RunAtlas.
2025-04-13 18:23:51 (9824): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-04-13 18:23:56 (9824): Guest Log: 00:00:10.004628 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 115 398 000ns (GuestNow=1 744 561 436 234 763 000 ns GuestLast=1 744 568 624 350 161 000 ns fSetTimeLastLoop=true )
2025-04-13 18:24:01 (9824): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-13 18:24:01 (9824): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-13 18:24:01 (9824): Guest Log: 2.6.3.0 1533 0 29536 144818 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-04-13 18:24:01 (9824): Guest Log: copied the webapp to /var/www
2025-04-13 18:24:02 (9824): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-13 18:24:02 (9824): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-13 18:24:02 (9824): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-13 18:24:02 (9824): Guest Log:  *** Starting ATLAS job. (PandaID=6600420918 taskID=44075164) ***
2025-04-13 20:03:30 (9824): Status Report: Elapsed Time: '6000.000000'
2025-04-13 20:03:30 (9824): Status Report: CPU Time: '11189.546127'
2025-04-13 21:43:30 (9824): Status Report: Elapsed Time: '12000.000000'
2025-04-13 21:43:30 (9824): Status Report: CPU Time: '23185.352223'
2025-04-13 23:23:31 (9824): Status Report: Elapsed Time: '18000.000000'
2025-04-13 23:23:31 (9824): Status Report: CPU Time: '35181.142719'
2025-04-14 00:44:26 (9824): Guest Log:  *** Job finished ***
2025-04-14 00:44:26 (9824): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:05,656 | INFO     | [data] queue_monitor thread has finished
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:12,025 | INFO     | job.realtimelogging is not enabled
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:13,026 | INFO     | [payload] run_realtimelog thread has finished
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:13,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704548779840)>', '<ExcThread(monitor, started 140703959066368)>']
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:14,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:14,673 | INFO     | [monitor] control thread has ended
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:18,996 | INFO     | all workflow threads have been joined
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:18,996 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:18,996 | INFO     | traces error code: 0
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:18,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:19,078 [wrapper] ==== pilot stdout END ====
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:19,083 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:19,087 [wrapper] pilotpid: 5836
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:19,092 [wrapper] Pilot exit status: 0
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:24,589 [wrapper] pandaids: 6600420918
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:24,623 [wrapper] cleanup supervisor_pilot 29269 5837
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:24,629 [wrapper] Test setup, not cleaning
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:24,633 [wrapper] apfmon messages muted
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:24,638 [wrapper] ==== wrapper stdout END ====
2025-04-14 00:44:26 (9824): Guest Log: 2025-04-13 22:44:24,643 [wrapper] ==== wrapper stderr END ====
2025-04-14 00:44:26 (9824): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 00:44:26 (9824): Guest Log:     "exeErrorCode": 0,
2025-04-14 00:44:26 (9824): Guest Log:     "exeErrorDiag": "",
2025-04-14 00:44:26 (9824): Guest Log:     "pilotErrorCode": 0,
2025-04-14 00:44:26 (9824): Guest Log:     "pilotErrorDiag": "",
2025-04-14 00:44:26 (9824): Guest Log:  *** Listing of results directory ***
2025-04-14 00:44:26 (9824): Guest Log: total 202784
2025-04-14 00:44:26 (9824): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 12 11:39 pilot3.tar.gz
2025-04-14 00:44:26 (9824): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 12 11:42 queuedata.json
2025-04-14 00:44:26 (9824): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 12 11:43 runpilot2-wrapper.sh
2025-04-14 00:44:26 (9824): Guest Log: -rwxr-xr-x. 1 atlas atlas      8322 Apr 13 16:23 init_data.xml
2025-04-14 00:44:26 (9824): Guest Log: -rwxr-xr-x. 1 atlas atlas    508885 Apr 13 16:23 input.tar.gz
2025-04-14 00:44:26 (9824): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 13 16:23 start_atlas.sh
2025-04-14 00:44:26 (9824): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 16:23 EVNT.44075162._001703.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 00:44:26 (9824): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 13 16:24 pandaJob.out
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas       461 Apr 13 16:24 setup.sh.local
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas    985764 Apr 13 16:24 agis_schedconf.cvmfs.json
2025-04-14 00:44:26 (9824): Guest Log: drwx------. 4 atlas atlas      4096 Apr 13 16:24 pilot3
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 22:43 pilot_heartbeat.json
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas 199158752 Apr 13 22:43 HITS.44075164._043864.pool.root.1
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 13 22:43 memory_monitor_summary.json
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 13 22:43 agis_ddmendpoints.agis.ALL.json
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas    362108 Apr 13 22:43 log.44075164._043864.job.log.tgz.1
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas      7715 Apr 13 22:43 heartbeat.json
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 13 22:44 pilotlog.txt
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas   1996111 Apr 13 22:44 log.44075164._043864.job.log.1
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 22:44 output.list
2025-04-14 00:44:26 (9824): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 13 22:44 runtime_log
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas   2375680 Apr 13 22:44 result.tar.gz
2025-04-14 00:44:26 (9824): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Apr 13 22:44 runtime_log.err
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas       663 Apr 13 22:44 L6zLDmQRoN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmTMyKDmHuVnqn.diag
2025-04-14 00:44:26 (9824): Guest Log: Looking for outputfile HITS.44075164._043864.pool.root.1
2025-04-14 00:44:26 (9824): Guest Log: HITS file was successfully produced
2025-04-14 00:44:26 (9824): Guest Log: -rw-------. 1 atlas atlas 199158752 Apr 13 22:43 /home/atlas/RunAtlas/HITS.44075164._043864.pool.root.1
2025-04-14 00:44:27 (9824): Guest Log: Successfully finished the ATLAS job!
2025-04-14 00:44:27 (9824): Guest Log: Copying the results back to the shared directory!
2025-04-14 00:44:27 (9824): Guest Log:  *** Contents of shared directory: ***
2025-04-14 00:44:27 (9824): Guest Log: total 413924
2025-04-14 00:44:27 (9824): Guest Log: -rwxrwxrwx. 1 root root 221774611 Apr 13 16:23 ATLAS.root_0
2025-04-14 00:44:27 (9824): Guest Log: -rwxrwxrwx. 1 root root 199158752 Apr 13 22:44 HITS.pool.root.1
2025-04-14 00:44:27 (9824): Guest Log: -rwxrwxrwx. 1 root root      8322 Apr 13 16:23 init_data.xml
2025-04-14 00:44:27 (9824): Guest Log: -rwxrwxrwx. 1 root root    508885 Apr 12 15:23 input.tar.gz
2025-04-14 00:44:27 (9824): Guest Log: -rwxrwxrwx. 1 root root   2375680 Apr 13 22:44 result.tar.gz
2025-04-14 00:44:27 (9824): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 12 15:23 start_atlas.sh
2025-04-14 00:44:27 (9824): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 00:44:27 (9824): VM Completion File Detected.
2025-04-14 00:44:27 (9824): Powering off VM.
2025-04-14 00:44:28 (9824): Successfully stopped VM.
2025-04-14 00:44:28 (9824): Deregistering VM. (boinc_0a3311501295741d, slot#0)
2025-04-14 00:44:28 (9824): Removing network bandwidth throttle group from VM.
2025-04-14 00:44:28 (9824): Removing VM from VirtualBox.
00:44:33 (9824): called boinc_finish(0)

</stderr_txt>
]]>

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