Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:14:55 (3858): wrapper (7.7.26015): starting
10:14:55 (3858): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 10:14:55] Arguments: --nthreads 12
[2025-04-12 10:14:55] Threads: 12
[2025-04-12 10:14:55] Checking for CVMFS
[2025-04-12 10:14:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 10:14:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 10:14:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 10:15:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 10:15:00] 2.11.2.0 30600 40806 122920 144776 2 651 12674803 18432000 7920 130560 0 80693109 98.842 211404957 30958 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 10:15:00] CVMFS is ok
[2025-04-12 10:15:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 10:15:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 10:15:00] Further information can be found at the LHC@home message board.
[2025-04-12 10:15:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 10:15:00] Checking for apptainer binary...
[2025-04-12 10:15:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 10:15:00] Running /usr/bin/apptainer --version
[2025-04-12 10:15:02] apptainer version 1.3.2-1.el7
[2025-04-12 10:15:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 10:15:27] c-206-8.aglt2.org
[2025-04-12 10:15:27] apptainer works
[2025-04-12 10:15:28] Set ATHENA_PROC_NUMBER=12
[2025-04-12 10:15:28] Set ATHENA_CORE_NUMBER=12
[2025-04-12 10:15:28] Starting ATLAS job with PandaID=6600419917
[2025-04-12 10:15:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 07:34:27]  *** The last 200 lines of the pilot log: ***
[2025-04-13 07:34:27] 2025-04-13 11:34:10,279 | INFO     | sum of square deviations: 586918279328.1729
[2025-04-13 07:34:27] 2025-04-13 11:34:10,350 | INFO     | sum of deviations: 775719621552.8057
[2025-04-13 07:34:27] 2025-04-13 11:34:10,351 | INFO     | mean x: 1744506290.470493
[2025-04-13 07:34:27] 2025-04-13 11:34:10,351 | INFO     | mean y: 2652930.350848828
[2025-04-13 07:34:27] 2025-04-13 11:34:10,351 | INFO     | -- intersect: -2303030513.3293867
[2025-04-13 07:34:27] 2025-04-13 11:34:10,352 | INFO     | intersect: -2303030513.3293867
[2025-04-13 07:34:27] 2025-04-13 11:34:10,354 | INFO     | chi2: 9.011770124979591
[2025-04-13 07:34:27] 2025-04-13 11:34:10,354 | INFO     | current chi2=9.011770124979591 (change=27.577936182009573 %)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,356 | INFO     | sum of square deviations: 579829407528.22
[2025-04-13 07:34:27] 2025-04-13 11:34:10,394 | INFO     | sum of deviations: 434734742011.2715
[2025-04-13 07:34:27] 2025-04-13 11:34:10,394 | INFO     | mean x: 1744506442.9748378
[2025-04-13 07:34:27] 2025-04-13 11:34:10,395 | INFO     | mean y: 2660265.234577922
[2025-04-13 07:34:27] 2025-04-13 11:34:10,395 | INFO     | -- intersect: -1305306437.690465
[2025-04-13 07:34:27] 2025-04-13 11:34:10,395 | INFO     | intersect: -1305306437.690465
[2025-04-13 07:34:27] 2025-04-13 11:34:10,396 | INFO     | chi2: 6.579079679825738
[2025-04-13 07:34:27] 2025-04-13 11:34:10,396 | INFO     | current chi2=6.579079679825738 (change=26.994590534557855 %)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,398 | INFO     | sum of square deviations: 572797914160.1777
[2025-04-13 07:34:27] 2025-04-13 11:34:10,432 | INFO     | sum of deviations: 143129511421.3235
[2025-04-13 07:34:27] 2025-04-13 11:34:10,433 | INFO     | mean x: 1744506595.4784026
[2025-04-13 07:34:27] 2025-04-13 11:34:10,433 | INFO     | mean y: 2666589.144254279
[2025-04-13 07:34:27] 2025-04-13 11:34:10,433 | INFO     | -- intersect: -433246968.6908682
[2025-04-13 07:34:27] 2025-04-13 11:34:10,433 | INFO     | intersect: -433246968.6908682
[2025-04-13 07:34:27] 2025-04-13 11:34:10,434 | INFO     | chi2: 4.8082227742988755
[2025-04-13 07:34:27] 2025-04-13 11:34:10,435 | INFO     | current chi2=4.8082227742988755 (change=26.9164836376289 %)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,436 | INFO     | sum of square deviations: 565823641445.5306
[2025-04-13 07:34:27] 2025-04-13 11:34:10,496 | INFO     | sum of deviations: -119495842477.89218
[2025-04-13 07:34:27] 2025-04-13 11:34:10,497 | INFO     | mean x: 1744506747.98036
[2025-04-13 07:34:27] 2025-04-13 11:34:10,497 | INFO     | mean y: 2672331.7545008184
[2025-04-13 07:34:27] 2025-04-13 11:34:10,497 | INFO     | -- intersect: 371093317.1797779
[2025-04-13 07:34:27] 2025-04-13 11:34:10,497 | INFO     | intersect: 371093317.1797779
[2025-04-13 07:34:27] 2025-04-13 11:34:10,499 | INFO     | chi2: 3.375047266317801
[2025-04-13 07:34:27] 2025-04-13 11:34:10,500 | INFO     | current chi2=3.375047266317801 (change=29.80676177571778 %)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,501 | INFO     | sum of square deviations: 558906058165.9376
[2025-04-13 07:34:27] 2025-04-13 11:34:10,565 | INFO     | sum of deviations: -332132339956.5958
[2025-04-13 07:34:27] 2025-04-13 11:34:10,565 | INFO     | mean x: 1744506900.483977
[2025-04-13 07:34:27] 2025-04-13 11:34:10,565 | INFO     | mean y: 2677017.123253903
[2025-04-13 07:34:27] 2025-04-13 11:34:10,565 | INFO     | -- intersect: 1039357780.3082314
[2025-04-13 07:34:27] 2025-04-13 11:34:10,566 | INFO     | intersect: 1039357780.3082314
[2025-04-13 07:34:27] 2025-04-13 11:34:10,567 | INFO     | chi2: 2.3786642181135456
[2025-04-13 07:34:27] 2025-04-13 11:34:10,568 | INFO     | current chi2=2.3786642181135456 (change=29.522047236135922 %)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,570 | INFO     | sum of square deviations: 552045228340.7611
[2025-04-13 07:34:27] 2025-04-13 11:34:10,633 | INFO     | sum of deviations: -462733294484.8394
[2025-04-13 07:34:27] 2025-04-13 11:34:10,633 | INFO     | mean x: 1744507052.9859736
[2025-04-13 07:34:27] 2025-04-13 11:34:10,633 | INFO     | mean y: 2679920.1270627063
[2025-04-13 07:34:27] 2025-04-13 11:34:10,633 | INFO     | -- intersect: 1464954122.3812876
[2025-04-13 07:34:27] 2025-04-13 11:34:10,634 | INFO     | intersect: 1464954122.3812876
[2025-04-13 07:34:27] 2025-04-13 11:34:10,635 | INFO     | chi2: 2.0060029833142075
[2025-04-13 07:34:27] 2025-04-13 11:34:10,636 | INFO     | current chi2=2.0060029833142075 (change=15.666828128220875 %)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,636 | INFO     | left removable region: 70
[2025-04-13 07:34:27] 2025-04-13 11:34:10,638 | INFO     | sum of square deviations: 497892842806.7137
[2025-04-13 07:34:27] 2025-04-13 11:34:10,696 | INFO     | sum of deviations: -694399662869.7998
[2025-04-13 07:34:27] 2025-04-13 11:34:10,696 | INFO     | mean x: 1744507937.5055509
[2025-04-13 07:34:27] 2025-04-13 11:34:10,696 | INFO     | mean y: 2689373.8155422714
[2025-04-13 07:34:27] 2025-04-13 11:34:10,697 | INFO     | -- intersect: 2435714353.3447514
[2025-04-13 07:34:27] 2025-04-13 11:34:10,697 | INFO     | intersect: 2435714353.3447514
[2025-04-13 07:34:27] 2025-04-13 11:34:10,699 | INFO     | chi2: 0.5526369314752432
[2025-04-13 07:34:27] 2025-04-13 11:34:10,699 | INFO     | -- intersect: 2435714353.3447514
[2025-04-13 07:34:27] 2025-04-13 11:34:10,699 | INFO     | current memory leak: -1.39 B/s (using 1171 data points, chi2=0.55)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,701 | INFO     | ..............................
[2025-04-13 07:34:27] 2025-04-13 11:34:10,702 | INFO     | . Timing measurements:
[2025-04-13 07:34:27] 2025-04-13 11:34:10,702 | INFO     | . get job = 2 s
[2025-04-13 07:34:27] 2025-04-13 11:34:10,702 | INFO     | . initial setup = 20 s
[2025-04-13 07:34:27] 2025-04-13 11:34:10,702 | INFO     | . payload setup = 122 s
[2025-04-13 07:34:27] 2025-04-13 11:34:10,702 | INFO     | . stage-in = 1 s
[2025-04-13 07:34:27] 2025-04-13 11:34:10,702 | INFO     | . payload execution = 76212 s
[2025-04-13 07:34:27] 2025-04-13 11:34:10,703 | INFO     | . stage-out = 2 s
[2025-04-13 07:34:27] 2025-04-13 11:34:10,703 | INFO     | . log creation = 0 s
[2025-04-13 07:34:27] 2025-04-13 11:34:10,703 | INFO     | ..............................
[2025-04-13 07:34:27] 2025-04-13 11:34:10,933 | INFO     | 
[2025-04-13 07:34:27] 2025-04-13 11:34:10,942 | INFO     | job summary report
[2025-04-13 07:34:27] 2025-04-13 11:34:10,942 | INFO     | --------------------------------------------------
[2025-04-13 07:34:27] 2025-04-13 11:34:10,942 | INFO     | PanDA job id: 6600419917
[2025-04-13 07:34:27] 2025-04-13 11:34:10,942 | INFO     | task id: 44075164
[2025-04-13 07:34:27] 2025-04-13 11:34:10,942 | INFO     | errors: (none)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 07:34:27] 2025-04-13 11:34:10,943 | INFO     | pilot state: finished 
[2025-04-13 07:34:27] 2025-04-13 11:34:10,943 | INFO     | transexitcode: 0
[2025-04-13 07:34:27] 2025-04-13 11:34:10,943 | INFO     | exeerrorcode: 0
[2025-04-13 07:34:27] 2025-04-13 11:34:10,943 | INFO     | exeerrordiag: 
[2025-04-13 07:34:27] 2025-04-13 11:34:10,943 | INFO     | exitcode: 0
[2025-04-13 07:34:27] 2025-04-13 11:34:10,944 | INFO     | exitmsg: OK
[2025-04-13 07:34:27] 2025-04-13 11:34:10,944 | INFO     | cpuconsumptiontime: 101617 s
[2025-04-13 07:34:27] 2025-04-13 11:34:10,944 | INFO     | nevents: 400
[2025-04-13 07:34:27] 2025-04-13 11:34:10,944 | INFO     | neventsw: 0
[2025-04-13 07:34:27] 2025-04-13 11:34:10,944 | INFO     | pid: 31031
[2025-04-13 07:34:27] 2025-04-13 11:34:10,945 | INFO     | pgrp: 31031
[2025-04-13 07:34:27] 2025-04-13 11:34:10,945 | INFO     | corecount: 12
[2025-04-13 07:34:27] 2025-04-13 11:34:10,945 | INFO     | event service: False
[2025-04-13 07:34:27] 2025-04-13 11:34:10,945 | INFO     | sizes: {0: 2417094, 1: 2417150, 3: 2417178, 4: 2417405, 5: 2417405, 16: 2417461, 27: 2417617, 38: 2417645, 50: 2417673, 62: 2417701, 74: 2417729, 87: 2418271, 98: 
[2025-04-13 07:34:27] 2025-04-13 11:34:10,945 | INFO     | --------------------------------------------------
[2025-04-13 07:34:27] 2025-04-13 11:34:10,946 | INFO     | 
[2025-04-13 07:34:27] 2025-04-13 11:34:10,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-13 07:34:27] 2025-04-13 11:34:10,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,978 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,978 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,978 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,978 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,978 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,979 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 07:34:27] 2025-04-13 11:34:10,984 | INFO     | job 6600419917 has completed (purged errors)
[2025-04-13 07:34:27] 2025-04-13 11:34:10,984 | INFO     | overall cleanup function is called
[2025-04-13 07:34:27] 2025-04-13 11:34:12,004 | INFO     | --- collectZombieJob: --- 10, [31031]
[2025-04-13 07:34:27] 2025-04-13 11:34:12,005 | INFO     | zombie collector waiting for pid 31031
[2025-04-13 07:34:27] 2025-04-13 11:34:12,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 07:34:27] 2025-04-13 11:34:12,005 | INFO     | collected zombie processes
[2025-04-13 07:34:27] 2025-04-13 11:34:12,006 | INFO     | will attempt to kill all subprocesses of pid=31031
[2025-04-13 07:34:27] 2025-04-13 11:34:12,331 | INFO     | process IDs to be killed: [31031] (in reverse order)
[2025-04-13 07:34:27] 2025-04-13 11:34:12,431 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 07:34:27] 2025-04-13 11:34:12,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 07:34:27] 2025-04-13 11:34:12,443 | INFO     | did not find any defunct processes belonging to 31031
[2025-04-13 07:34:27] 2025-04-13 11:34:12,453 | INFO     | did not find any defunct processes belonging to 31031
[2025-04-13 07:34:27] 2025-04-13 11:34:12,453 | INFO     | ready for new job
[2025-04-13 07:34:27] 2025-04-13 11:34:12,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 07:34:27] 2025-04-13 11:34:12,457 | INFO     | **************************************
[2025-04-13 07:34:27] 2025-04-13 11:34:12,457 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 07:34:27] 2025-04-13 11:34:12,457 | INFO     | **************************************
[2025-04-13 07:34:27] 2025-04-13 11:34:12,457 | INFO     | 
[2025-04-13 07:34:27] 2025-04-13 11:34:12,459 | INFO     | architecture information:
[2025-04-13 07:34:27] 2025-04-13 11:34:12,459 | INFO     | executing command: cat /etc/os-release
[2025-04-13 07:34:27] 2025-04-13 11:34:12,475 | INFO     | cat /etc/os-release:
[2025-04-13 07:34:27] NAME="CentOS Linux"
[2025-04-13 07:34:27] VERSION="7 (Core)"
[2025-04-13 07:34:27] ID="centos"
[2025-04-13 07:34:27] ID_LIKE="rhel fedora"
[2025-04-13 07:34:27] VERSION_ID="7"
[2025-04-13 07:34:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 07:34:27] ANSI_COLOR="0;31"
[2025-04-13 07:34:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 07:34:27] HOME_URL="https://www.centos.org/"
[2025-04-13 07:34:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 07:34:27] 
[2025-04-13 07:34:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 07:34:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 07:34:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 07:34:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 07:34:27] 
[2025-04-13 07:34:27] 2025-04-13 11:34:12,476 | INFO     | **************************************
[2025-04-13 07:34:27] 2025-04-13 11:34:12,979 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-13 07:34:27] 2025-04-13 11:34:12,998 | INFO     | sufficient remaining disk space (29210181632 B)
[2025-04-13 07:34:27] 2025-04-13 11:34:12,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 07:34:27] 2025-04-13 11:34:12,999 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 07:34:27] 2025-04-13 11:34:12,999 | INFO     | update_server=False
[2025-04-13 07:34:27] 2025-04-13 11:34:12,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 07:34:27] 2025-04-13 11:34:12,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 07:34:27] 2025-04-13 11:34:13,105 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 07:34:27] 2025-04-13 11:34:13,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 07:34:27] 2025-04-13 11:34:13,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 07:34:27] 2025-04-13 11:34:13,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 07:34:27] 2025-04-13 11:34:13,179 | INFO     | aborting loop
[2025-04-13 07:34:27] 2025-04-13 11:34:13,721 | INFO     | all payload control threads have been joined
[2025-04-13 07:34:27] 2025-04-13 11:34:13,798 | INFO     | all data control threads have been joined
[2025-04-13 07:34:27] 2025-04-13 11:34:14,005 | INFO     | [job] retrieve thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,005 | INFO     | [job] validate thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,184 | INFO     | [job] job monitor thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,190 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,230 | INFO     | [data] copytool_in thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,540 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,580 | INFO     | all job control threads have been joined
[2025-04-13 07:34:27] 2025-04-13 11:34:14,630 | INFO     | [payload] failed_post thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,663 | INFO     | [payload] validate_post thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,726 | INFO     | [payload] control thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:14,803 | INFO     | [data] control thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:15,005 | INFO     | [data] copytool_out thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:15,243 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:15,586 | INFO     | [job] control thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:15,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 07:34:27] 2025-04-13 11:34:16,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 07:34:27] 2025-04-13 11:34:16,887 | INFO     | [job] queue monitor thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:20,039 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 07:34:27] 2025-04-13 11:34:21,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388346681152)>', '<ExcThread(monitor, started 140387624666880)>']
[2025-04-13 07:34:27] 2025-04-13 11:34:21,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 07:34:27] 2025-04-13 11:34:21,146 | INFO     | [monitor] control thread has ended
[2025-04-13 07:34:27] 2025-04-13 11:34:26,087 | INFO     | all workflow threads have been joined
[2025-04-13 07:34:27] 2025-04-13 11:34:26,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 07:34:27] 2025-04-13 11:34:26,107 | INFO     | traces error code: 0
[2025-04-13 07:34:27] 2025-04-13 11:34:26,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 07:34:27] 2025-04-13 11:34:26,787 [wrapper] ==== pilot stdout END ====
[2025-04-13 07:34:27] 2025-04-13 11:34:26,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 07:34:27] 2025-04-13 11:34:26,795 [wrapper] pilotpid: 11527
[2025-04-13 07:34:27] 2025-04-13 11:34:26,799 [wrapper] Pilot exit status: 0
[2025-04-13 07:34:27] 2025-04-13 11:34:26,874 [wrapper] pandaids: 6600419917
[2025-04-13 07:34:27] 2025-04-13 11:34:26,938 [wrapper] cleanup supervisor_pilot 25278 11528
[2025-04-13 07:34:27] 2025-04-13 11:34:26,947 [wrapper] Test setup, not cleaning
[2025-04-13 07:34:27] 2025-04-13 11:34:26,950 [wrapper] apfmon messages muted
[2025-04-13 07:34:27] 2025-04-13 11:34:26,953 [wrapper] ==== wrapper stdout END ====
[2025-04-13 07:34:27] 2025-04-13 11:34:26,956 [wrapper] ==== wrapper stderr END ====
[2025-04-13 07:34:27]  *** Error codes and diagnostics ***
[2025-04-13 07:34:27]     "exeErrorCode": 0,
[2025-04-13 07:34:27]     "exeErrorDiag": "",
[2025-04-13 07:34:27]     "pilotErrorCode": 0,
[2025-04-13 07:34:27]     "pilotErrorDiag": "",
[2025-04-13 07:34:27]  *** Listing of results directory ***
[2025-04-13 07:34:27] total 425572
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas    495897 Apr 12 06:50 pilot3.tar.gz
[2025-04-13 07:34:27] -rwx------ 1 boincer umatlas     37140 Apr 12 06:53 runpilot2-wrapper.sh
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 06:53 queuedata.json
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas       100 Apr 12 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 07:34:27] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 10:14 run_atlas
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas       105 Apr 12 10:14 job.xml
[2025-04-13 07:34:27] -rw-r--r-- 2 boincer umatlas 224207687 Apr 12 10:14 EVNT.44075162._001685.pool.root.1
[2025-04-13 07:34:27] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 10:14 start_atlas.sh
[2025-04-13 07:34:27] drwxrwx--x 2 boincer umatlas      4096 Apr 12 10:14 shared
[2025-04-13 07:34:27] -rw-r--r-- 2 boincer umatlas    508877 Apr 12 10:14 input.tar.gz
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas         0 Apr 12 10:14 boinc_lockfile
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas      2547 Apr 12 10:15 pandaJob.out
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas       467 Apr 12 10:15 setup.sh.local
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas    986068 Apr 12 10:18 agis_schedconf.cvmfs.json
[2025-04-13 07:34:27] drwx------ 4 boincer umatlas      4096 Apr 12 10:18 pilot3
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas      5952 Apr 13 07:28 init_data.xml
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas 195527500 Apr 13 07:32 HITS.44075164._043411.pool.root.1
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas       532 Apr 13 07:32 boinc_task_state.xml
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas        95 Apr 13 07:33 pilot_heartbeat.json
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas      1071 Apr 13 07:33 memory_monitor_summary.json
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas   1603529 Apr 13 07:33 agis_ddmendpoints.agis.ALL.json
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas    924894 Apr 13 07:33 log.44075164._043411.job.log.tgz.1
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas      7786 Apr 13 07:34 heartbeat.json
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas        29 Apr 13 07:34 wrapper_checkpoint.txt
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 07:34 boinc_mmap_file
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas      4353 Apr 13 07:34 pilotlog.txt
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas   5186356 Apr 13 07:34 log.44075164._043411.job.log.1
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas       357 Apr 13 07:34 output.list
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas       620 Apr 13 07:34 runtime_log
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas   6133760 Apr 13 07:34 result.tar.gz
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas     11416 Apr 13 07:34 runtime_log.err
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas       665 Apr 13 07:34 prlMDmjfnN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmAKRLDmG88aqn.diag
[2025-04-13 07:34:27] -rw-r--r-- 1 boincer umatlas      2070 Apr 13 07:34 stderr.txt
[2025-04-13 07:34:27] HITS file was successfully produced:
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas 195527500 Apr 13 07:32 shared/HITS.pool.root.1
[2025-04-13 07:34:27]  *** Contents of shared directory: ***
[2025-04-13 07:34:27] total 416420
[2025-04-13 07:34:27] -rw-r--r-- 2 boincer umatlas 224207687 Apr 12 10:14 ATLAS.root_0
[2025-04-13 07:34:27] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 10:14 start_atlas.sh
[2025-04-13 07:34:27] -rw-r--r-- 2 boincer umatlas    508877 Apr 12 10:14 input.tar.gz
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas 195527500 Apr 13 07:32 HITS.pool.root.1
[2025-04-13 07:34:27] -rw------- 1 boincer umatlas   6133760 Apr 13 07:34 result.tar.gz
07:34:29 (3858): run_atlas exited; CPU time 103686.246001
07:34:29 (3858): called boinc_finish(0)

</stderr_txt>
]]>

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