Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-12 12:02:52 (11956): Detected: vboxwrapper 26206
2025-04-12 12:02:52 (11956): Detected: BOINC client v7.24.1
2025-04-12 12:02:52 (11956): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-04-12 12:02:52 (11956): Successfully copied 'init_data.xml' to the shared directory.
2025-04-12 12:02:53 (11956): Create VM. (boinc_a8cd35feb6325184, slot#2)
2025-04-12 12:02:53 (11956): Setting Memory Size for VM. (4800MB)
2025-04-12 12:02:54 (11956): Setting CPU Count for VM. (8)
2025-04-12 12:02:54 (11956): Setting Chipset Options for VM.
2025-04-12 12:02:54 (11956): Setting Graphics Controller Options for VM.
2025-04-12 12:02:54 (11956): Setting Boot Options for VM.
2025-04-12 12:02:55 (11956): Setting Network Configuration for NAT.
2025-04-12 12:02:55 (11956): Enabling VM Network Access.
2025-04-12 12:02:55 (11956): Disabling USB Support for VM.
2025-04-12 12:02:55 (11956): Disabling COM Port Support for VM.
2025-04-12 12:02:56 (11956): Disabling LPT Port Support for VM.
2025-04-12 12:02:56 (11956): Disabling Audio Support for VM.
2025-04-12 12:02:56 (11956): Disabling Clipboard Support for VM.
2025-04-12 12:02:56 (11956): Disabling Drag and Drop Support for VM.
2025-04-12 12:02:57 (11956): Adding storage controller(s) to VM.
2025-04-12 12:02:57 (11956): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-12 12:02:57 (11956): Adding VirtualBox Guest Additions to VM.
2025-04-12 12:02:58 (11956): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-12 12:02:58 (11956): forwarding host port 64904 to guest port 80
2025-04-12 12:02:58 (11956): Enabling remote desktop for VM.
2025-04-12 12:02:58 (11956): Required extension pack not installed, remote desktop not enabled.
2025-04-12 12:02:58 (11956): Enabling shared directory for VM.
2025-04-12 12:02:59 (11956): Starting VM using VBoxManage interface. (boinc_a8cd35feb6325184, slot#2)
2025-04-12 12:03:03 (11956): Successfully started VM. (PID = '2000')
2025-04-12 12:03:03 (11956): Reporting VM Process ID to BOINC.
2025-04-12 12:03:03 (11956): Guest Log: BIOS: VirtualBox 6.0.14
2025-04-12 12:03:03 (11956): Guest Log: CPUID EDX: 0x178bfbff
2025-04-12 12:03:03 (11956): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-12 12:03:03 (11956): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-12 12:03:03 (11956): Detected: Web Application Enabled (http://localhost:64904)
2025-04-12 12:03:03 (11956): Preference change detected
2025-04-12 12:03:03 (11956): Setting CPU throttle for VM. (100%)
2025-04-12 12:03:03 (11956): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 12:03:05 (11956): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-12 12:03:05 (11956): Guest Log: BIOS: Booting from Hard Disk...
2025-04-12 12:03:08 (11956): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-12 12:03:08 (11956): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-12 12:03:08 (11956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-12 12:03:17 (11956): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-12 12:03:17 (11956): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-12 12:03:28 (11956): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-12 12:03:28 (11956): Guest Log: 00:00:00.000280 main     Log opened 2025-04-12T12:03:27.076252000Z
2025-04-12 12:03:28 (11956): Guest Log: 00:00:00.000460 main     OS Product: Linux
2025-04-12 12:03:28 (11956): Guest Log: 00:00:00.000558 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-12 12:03:28 (11956): Guest Log: 00:00:00.000654 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-12 12:03:28 (11956): Guest Log: 00:00:00.000731 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-12 12:03:28 (11956): Guest Log: 00:00:00.000733 main     Process ID: 1370
2025-04-12 12:03:28 (11956): Guest Log: 00:00:00.000735 main     Package type: LINUX_64BITS_GENERIC
2025-04-12 12:03:28 (11956): Guest Log: 00:00:00.002230 main     5.2.32 r132073 started. Verbose level = 0
2025-04-12 12:03:29 (11956): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-12 12:03:29 (11956): Guest Log: [INFO] Mounting shared directory
2025-04-12 12:03:29 (11956): Guest Log: [INFO] Checking for init_data.xml
2025-04-12 12:03:35 (11956): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-12 12:03:35 (11956): Guest Log: [INFO] Detected branch: prod
2025-04-12 12:03:35 (11956): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-12 12:03:35 (11956): Guest Log: Copying input files
2025-04-12 12:03:38 (11956): Guest Log: Copied input files into RunAtlas.
2025-04-12 12:03:38 (11956): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-12 12:03:38 (11956): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-12 12:03:38 (11956): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-12 12:03:38 (11956): Guest Log: Further information can be found at the LHC@home message board.
2025-04-12 12:03:38 (11956): Guest Log: 00:00:10.008935 timesync vgsvcTimeSyncWorker: Radical guest time change: 36 011 642 313 000ns (GuestNow=1 744 495 418 722 596 000 ns GuestLast=1 744 459 407 080 283 000 ns fSetTimeLastLoop=true )
2025-04-12 12:03:50 (11956): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-12 12:03:50 (11956): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-12 12:03:50 (11956): Guest Log: 2.6.3.0 1651 0 32220 144788 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-12 12:03:52 (11956): Guest Log: copied the webapp to /var/www
2025-04-12 12:03:52 (11956): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-12 12:03:52 (11956): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-12 12:03:52 (11956): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-12 12:03:52 (11956): Guest Log:  *** Starting ATLAS job. (PandaID=6600396203 taskID=44075164) ***
2025-04-12 13:43:09 (11956): Status Report: Elapsed Time: '6000.000000'
2025-04-12 13:43:09 (11956): Status Report: CPU Time: '35117.968750'
2025-04-12 15:23:15 (11956): Status Report: Elapsed Time: '12000.000000'
2025-04-12 15:23:15 (11956): Status Report: CPU Time: '81407.984375'
2025-04-12 16:40:59 (11956): Guest Log:  *** Job finished ***
2025-04-12 16:40:59 (11956): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:48,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:48,549 | INFO     | [data] copytool_out thread has finished
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:52,310 | INFO     | [data] queue_monitor thread has finished
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:52,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490651854656)>', '<ExcThread(monitor, started 140489823074048)>']
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:53,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:53,315 | INFO     | [monitor] control thread has ended
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,349 | INFO     | all workflow threads have been joined
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,349 | INFO     | end of generic workflow (traces error code: 0)
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,349 | INFO     | traces error code: 0
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,485 [wrapper] ==== pilot stdout END ====
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,494 [wrapper] ==== wrapper stdout RESUME ====
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,503 [wrapper] pilotpid: 6013
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,512 [wrapper] Pilot exit status: 0
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,607 [wrapper] pandaids: 6600396203
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,676 [wrapper] cleanup supervisor_pilot 17520 6014
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,689 [wrapper] Test setup, not cleaning
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,698 [wrapper] apfmon messages muted
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,708 [wrapper] ==== wrapper stdout END ====
2025-04-12 16:40:59 (11956): Guest Log: 2025-04-13 02:40:57,717 [wrapper] ==== wrapper stderr END ====
2025-04-12 16:40:59 (11956): Guest Log:  *** Error codes and diagnostics ***
2025-04-12 16:40:59 (11956): Guest Log:     "exeErrorCode": 0,
2025-04-12 16:40:59 (11956): Guest Log:     "exeErrorDiag": "",
2025-04-12 16:40:59 (11956): Guest Log:     "pilotErrorCode": 0,
2025-04-12 16:40:59 (11956): Guest Log:     "pilotErrorDiag": "",
2025-04-12 16:40:59 (11956): Guest Log:  *** Listing of results directory ***
2025-04-12 16:40:59 (11956): Guest Log: total 199784
2025-04-12 16:40:59 (11956): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 12 06:56 pilot3.tar.gz
2025-04-12 16:40:59 (11956): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 12 06:59 runpilot2-wrapper.sh
2025-04-12 16:40:59 (11956): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 12 06:59 queuedata.json
2025-04-12 16:40:59 (11956): Guest Log: -rwxr-xr-x. 1 atlas atlas      9072 Apr 12 22:03 init_data.xml
2025-04-12 16:40:59 (11956): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 Apr 12 22:03 input.tar.gz
2025-04-12 16:40:59 (11956): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 12 22:03 start_atlas.sh
2025-04-12 16:40:59 (11956): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 12 22:03 EVNT.44075162._001589.pool.root.1 -> /data/./ATLAS.root_0
2025-04-12 16:40:59 (11956): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 12 22:03 pandaJob.out
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas       424 Apr 12 22:03 setup.sh.local
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas    985800 Apr 12 22:04 agis_schedconf.cvmfs.json
2025-04-12 16:40:59 (11956): Guest Log: drwx------. 4 atlas atlas      4096 Apr 12 22:05 pilot3
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas 197318492 Apr 13 02:39 HITS.44075164._041023.pool.root.1
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 02:40 pilot_heartbeat.json
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas      1035 Apr 13 02:40 memory_monitor_summary.json
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 13 02:40 agis_ddmendpoints.agis.ALL.json
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas    411347 Apr 13 02:40 log.44075164._041023.job.log.tgz.1
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas      7740 Apr 13 02:40 heartbeat.json
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 13 02:40 pilotlog.txt
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas   1330010 Apr 13 02:40 log.44075164._041023.job.log.1
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 02:40 output.list
2025-04-12 16:40:59 (11956): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 13 02:40 runtime_log
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas   1761280 Apr 13 02:40 result.tar.gz
2025-04-12 16:40:59 (11956): Guest Log: -rw-r--r--. 1 atlas atlas     10975 Apr 13 02:40 runtime_log.err
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas       670 Apr 13 02:40 BKMLDmu0jN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmV6xKDmXpmOyn.diag
2025-04-12 16:40:59 (11956): Guest Log: Looking for outputfile HITS.44075164._041023.pool.root.1
2025-04-12 16:40:59 (11956): Guest Log: HITS file was successfully produced
2025-04-12 16:40:59 (11956): Guest Log: -rw-------. 1 atlas atlas 197318492 Apr 13 02:39 /home/atlas/RunAtlas/HITS.44075164._041023.pool.root.1
2025-04-12 16:41:00 (11956): Guest Log: Successfully finished the ATLAS job!
2025-04-12 16:41:00 (11956): Guest Log: Copying the results back to the shared directory!
2025-04-12 16:41:00 (11956): Guest Log:  *** Contents of shared directory: ***
2025-04-12 16:41:00 (11956): Guest Log: total 409044
2025-04-12 16:41:00 (11956): Guest Log: -rwxrwxrwx. 1 root root 219231036 Apr 12 22:02 ATLAS.root_0
2025-04-12 16:41:00 (11956): Guest Log: -rwxrwxrwx. 1 root root 197318492 Apr 13 02:41 HITS.pool.root.1
2025-04-12 16:41:00 (11956): Guest Log: -rwxrwxrwx. 1 root root      9072 Apr 12 22:02 init_data.xml
2025-04-12 16:41:00 (11956): Guest Log: -rwxrwxrwx. 1 root root    508877 Apr 12 13:26 input.tar.gz
2025-04-12 16:41:00 (11956): Guest Log: -rwxrwxrwx. 1 root root   1761280 Apr 13 02:41 result.tar.gz
2025-04-12 16:41:00 (11956): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 12 13:26 start_atlas.sh
2025-04-12 16:41:00 (11956): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-12 16:41:01 (11956): VM Completion File Detected.
2025-04-12 16:41:01 (11956): Powering off VM.
2025-04-12 16:41:03 (11956): Successfully stopped VM.
2025-04-12 16:41:03 (11956): Deregistering VM. (boinc_a8cd35feb6325184, slot#2)
2025-04-12 16:41:03 (11956): Removing network bandwidth throttle group from VM.
2025-04-12 16:41:03 (11956): Removing VM from VirtualBox.
16:41:08 (11956): called boinc_finish(0)

</stderr_txt>
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