Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:49:21 (2407538): wrapper (7.7.26015): starting
22:49:21 (2407538): wrapper: running run_atlas (--nthreads 4)
[2025-04-12 22:49:21] Arguments: --nthreads 4
[2025-04-12 22:49:21] Threads: 4
[2025-04-12 22:49:21] Checking for CVMFS
[2025-04-12 22:49:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 22:49:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 22:49:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 22:49:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 22:49:21] 2.9.2.0 1919598 1479 83092 144786 1 56 20437891 36864001 0 130560 0 1276520 99.997 132509 8623 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-12 22:49:21] CVMFS is ok
[2025-04-12 22:49:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 22:49:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 22:49:21] Further information can be found at the LHC@home message board.
[2025-04-12 22:49:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 22:49:21] Checking for apptainer binary...
[2025-04-12 22:49:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 22:49:21] Running /usr/bin/apptainer --version
[2025-04-12 22:49:21] apptainer version 1.3.6-4.2
[2025-04-12 22:49:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 22:49:21] thA317a
[2025-04-12 22:49:21] apptainer works
[2025-04-12 22:49:21] Set ATHENA_PROC_NUMBER=4
[2025-04-12 22:49:21] Set ATHENA_CORE_NUMBER=4
[2025-04-12 22:49:21] Starting ATLAS job with PandaID=6596325862
[2025-04-12 22:49:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 23:59:52]  *** The last 200 lines of the pilot log: ***
[2025-04-12 23:59:52]  is_altstaged=None
[2025-04-12 23:59:52]  is_tar=False
[2025-04-12 23:59:52]  lfn=log.44075164._029373.job.log.tgz.1
[2025-04-12 23:59:52]  mtime=0
[2025-04-12 23:59:52]  protocol_id=None
[2025-04-12 23:59:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-12 23:59:52]  replicas=None
[2025-04-12 23:59:52]  scope=mc23_13p6TeV
[2025-04-12 23:59:52]  status=None
[2025-04-12 23:59:52]  status_code=0
[2025-04-12 23:59:52]  storage_token=
[2025-04-12 23:59:52]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6596325862/log.44075164._029373.job.log.tgz.1
[2025-04-12 23:59:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/f9/log.44075164._029373.job.log.tgz.1
[2025-04-12 23:59:52]  workdir=None
[2025-04-12 23:59:52] ]
[2025-04-12 23:59:52] 2025-04-12 21:59:29,072 | INFO     | transferring file log.44075164._029373.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6596325862/log.44075164._029373.job.log.tgz.1 to /local/data/boinc/
[2025-04-12 23:59:52] 2025-04-12 21:59:29,072 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6596325862/log.44075164._029373.job.log.tgz.1 /local/data/boinc/slots/0/log.44075164._0293
[2025-04-12 23:59:52] 2025-04-12 21:59:29,085 | INFO     | adding to output.list: log.44075164._029373.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/f9/log.44075164._029373.job.log.tg
[2025-04-12 23:59:52] 2025-04-12 21:59:29,085 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-12 23:59:52] 2025-04-12 21:59:29,085 | INFO     | summary of transferred files:
[2025-04-12 23:59:52] 2025-04-12 21:59:29,085 | INFO     |  -- lfn=log.44075164._029373.job.log.tgz.1, status_code=0, status=transferred
[2025-04-12 23:59:52] 2025-04-12 21:59:29,085 | INFO     | stage-out finished correctly
[2025-04-12 23:59:52] 2025-04-12 21:59:29,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-12 23:59:52] 2025-04-12 21:59:29,317 | INFO     | job 6596325862 has state=finished
[2025-04-12 23:59:52] 2025-04-12 21:59:29,317 | INFO     | preparing for final server update for job 6596325862 in state='finished'
[2025-04-12 23:59:52] 2025-04-12 21:59:29,548 | INFO     | PID=2411251 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-12 23:59:52] 2025-04-12 21:59:29,888 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-12 23:59:52] 2025-04-12 21:59:29,888 | INFO     | this job has now completed (state=finished)
[2025-04-12 23:59:52] 2025-04-12 21:59:29,888 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-12 23:59:52] 2025-04-12 21:59:29,888 | INFO     | log transfer has been attempted: DONE
[2025-04-12 23:59:52] 2025-04-12 21:59:29,888 | INFO     | job 6596325862 has finished - writing final server update
[2025-04-12 23:59:52] 2025-04-12 21:59:29,888 | INFO     | total number of processed events: 400 (read)
[2025-04-12 23:59:52] 2025-04-12 21:59:29,889 | INFO     | executing command: lscpu
[2025-04-12 23:59:52] 2025-04-12 21:59:29,907 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-12 23:59:52] 2025-04-12 21:59:31,277 | WARNING  | process 2417806 can no longer be monitored (due to stat problems) - aborting
[2025-04-12 23:59:52] 2025-04-12 21:59:31,277 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6596325862/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 23:59:52] 2025-04-12 21:59:31,277 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6596325862/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 23:59:52] 2025-04-12 21:59:31,341 | INFO     | number of running child processes to parent process 2417806: 1
[2025-04-12 23:59:52] 2025-04-12 21:59:31,341 | INFO     | maximum number of monitored processes: 6
[2025-04-12 23:59:52] 2025-04-12 21:59:32,346 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-12 23:59:52] 2025-04-12 21:59:32,347 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6596325862/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 23:59:52] 2025-04-12 21:59:32,347 | INFO     | extracted standard info from prmon json
[2025-04-12 23:59:52] 2025-04-12 21:59:32,347 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 23:59:52] 2025-04-12 21:59:32,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 23:59:52] 2025-04-12 21:59:32,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 23:59:52] 2025-04-12 21:59:32,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | fitting pss+swap vs Time
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | sum of square deviations: 73882315.5
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | sum of deviations: 4598241213.500001
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | mean x: 1744493152.5
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | mean y: 2383195.7258064514
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | -- intersect: -108570287492.89172
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | intersect: -108570287492.89172
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | chi2: 1.4569783175980244
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | -- intersect: -108570287492.89172
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | current memory leak: 62.24 B/s (using 62 data points, chi2=1.46)
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | ..............................
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | . Timing measurements:
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | . get job = 0 s
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | . initial setup = 1 s
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | . payload setup = 3 s
[2025-04-12 23:59:52] 2025-04-12 21:59:32,348 | INFO     | . stage-in = 0 s
[2025-04-12 23:59:52] 2025-04-12 21:59:32,349 | INFO     | . payload execution = 4180 s
[2025-04-12 23:59:52] 2025-04-12 21:59:32,349 | INFO     | . stage-out = 0 s
[2025-04-12 23:59:52] 2025-04-12 21:59:32,349 | INFO     | . log creation = 0 s
[2025-04-12 23:59:52] 2025-04-12 21:59:32,349 | INFO     | ..............................
[2025-04-12 23:59:52] 2025-04-12 21:59:32,378 | INFO     | 
[2025-04-12 23:59:52] 2025-04-12 21:59:32,378 | INFO     | job summary report
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | --------------------------------------------------
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | PanDA job id: 6596325862
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | task id: 44075164
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | errors: (none)
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | pilot state: finished 
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | transexitcode: 0
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | exeerrorcode: 0
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | exeerrordiag: 
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | exitcode: 0
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | exitmsg: OK
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | cpuconsumptiontime: 14074 s
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | nevents: 400
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | neventsw: 0
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | pid: 2417806
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | pgrp: 2417806
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | corecount: 4
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | event service: False
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | sizes: {0: 2417159, 1: 2417358, 3: 2417564, 11: 2417592, 4186: 2443494, 4187: 2443493, 4188: 2452680, 4191: 2452794}
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | --------------------------------------------------
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | 
[2025-04-12 23:59:52] 2025-04-12 21:59:32,379 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | job 6596325862 has completed (purged errors)
[2025-04-12 23:59:52] 2025-04-12 21:59:32,392 | INFO     | overall cleanup function is called
[2025-04-12 23:59:52] 2025-04-12 21:59:33,398 | INFO     | --- collectZombieJob: --- 10, [2417806]
[2025-04-12 23:59:52] 2025-04-12 21:59:33,399 | INFO     | zombie collector waiting for pid 2417806
[2025-04-12 23:59:52] 2025-04-12 21:59:33,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 23:59:52] 2025-04-12 21:59:33,399 | INFO     | collected zombie processes
[2025-04-12 23:59:52] 2025-04-12 21:59:33,399 | INFO     | will attempt to kill all subprocesses of pid=2417806
[2025-04-12 23:59:52] 2025-04-12 21:59:33,447 | INFO     | process IDs to be killed: [2417806] (in reverse order)
[2025-04-12 23:59:52] 2025-04-12 21:59:33,474 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 23:59:52] 2025-04-12 21:59:33,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 23:59:52] 2025-04-12 21:59:33,476 | INFO     | did not find any defunct processes belonging to 2417806
[2025-04-12 23:59:52] 2025-04-12 21:59:33,477 | INFO     | did not find any defunct processes belonging to 2417806
[2025-04-12 23:59:52] 2025-04-12 21:59:33,477 | INFO     | ready for new job
[2025-04-12 23:59:52] 2025-04-12 21:59:33,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 23:59:52] 2025-04-12 21:59:33,478 | INFO     | **************************************
[2025-04-12 23:59:52] 2025-04-12 21:59:33,478 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 23:59:52] 2025-04-12 21:59:33,478 | INFO     | **************************************
[2025-04-12 23:59:52] 2025-04-12 21:59:33,478 | INFO     | 
[2025-04-12 23:59:52] 2025-04-12 21:59:33,478 | INFO     | architecture information:
[2025-04-12 23:59:52] 2025-04-12 21:59:33,478 | INFO     | executing command: cat /etc/os-release
[2025-04-12 23:59:52] 2025-04-12 21:59:33,488 | INFO     | cat /etc/os-release:
[2025-04-12 23:59:52] NAME="CentOS Linux"
[2025-04-12 23:59:52] VERSION="7 (Core)"
[2025-04-12 23:59:52] ID="centos"
[2025-04-12 23:59:52] ID_LIKE="rhel fedora"
[2025-04-12 23:59:52] VERSION_ID="7"
[2025-04-12 23:59:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 23:59:52] ANSI_COLOR="0;31"
[2025-04-12 23:59:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 23:59:52] HOME_URL="https://www.centos.org/"
[2025-04-12 23:59:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 23:59:52] 
[2025-04-12 23:59:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 23:59:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 23:59:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 23:59:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 23:59:52] 
[2025-04-12 23:59:52] 2025-04-12 21:59:33,488 | INFO     | **************************************
[2025-04-12 23:59:52] 2025-04-12 21:59:33,991 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-12 23:59:52] 2025-04-12 21:59:34,003 | INFO     | sufficient remaining disk space (234778263552 B)
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | INFO     | update_server=False
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 23:59:52] 2025-04-12 21:59:34,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 23:59:52] 2025-04-12 21:59:34,342 | INFO     | all job control threads have been joined
[2025-04-12 23:59:52] 2025-04-12 21:59:34,488 | INFO     | all payload control threads have been joined
[2025-04-12 23:59:52] 2025-04-12 21:59:34,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 23:59:52] 2025-04-12 21:59:34,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 23:59:52] 2025-04-12 21:59:34,850 | INFO     | aborting loop
[2025-04-12 23:59:52] 2025-04-12 21:59:35,005 | INFO     | [job] retrieve thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,010 | INFO     | [job] queue monitor thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,034 | INFO     | all data control threads have been joined
[2025-04-12 23:59:52] 2025-04-12 21:59:35,078 | INFO     | [payload] validate_post thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 23:59:52] 2025-04-12 21:59:35,348 | INFO     | [job] control thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,468 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,479 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,493 | INFO     | [payload] control thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,508 | INFO     | [data] copytool_in thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,509 | INFO     | [job] validate thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,670 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:35,853 | INFO     | [job] job monitor thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:36,039 | INFO     | [data] control thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:36,173 | INFO     | [payload] failed_post thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:36,629 | INFO     | [data] copytool_out thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:39,329 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:44,963 | INFO     | job.realtimelogging is not enabled
[2025-04-12 23:59:52] 2025-04-12 21:59:45,969 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 23:59:52] 2025-04-12 21:59:47,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756517082944)>', '<ExcThread(monitor, started 139755744388864)>']
[2025-04-12 23:59:52] 2025-04-12 21:59:48,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 23:59:52] 2025-04-12 21:59:48,079 | INFO     | [monitor] control thread has ended
[2025-04-12 23:59:52] 2025-04-12 21:59:52,435 | INFO     | all workflow threads have been joined
[2025-04-12 23:59:52] 2025-04-12 21:59:52,436 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 23:59:52] 2025-04-12 21:59:52,436 | INFO     | traces error code: 0
[2025-04-12 23:59:52] 2025-04-12 21:59:52,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 23:59:52] 2025-04-12 21:59:52,484 [wrapper] ==== pilot stdout END ====
[2025-04-12 23:59:52] 2025-04-12 21:59:52,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 23:59:52] 2025-04-12 21:59:52,490 [wrapper] pilotpid: 2411251
[2025-04-12 23:59:52] 2025-04-12 21:59:52,492 [wrapper] Pilot exit status: 0
[2025-04-12 23:59:52] 2025-04-12 21:59:52,500 [wrapper] pandaids: 6596325862
[2025-04-12 23:59:52] 2025-04-12 21:59:52,518 [wrapper] cleanup supervisor_pilot 2428344 2411252
[2025-04-12 23:59:52] 2025-04-12 21:59:52,521 [wrapper] Test setup, not cleaning
[2025-04-12 23:59:52] 2025-04-12 21:59:52,523 [wrapper] apfmon messages muted
[2025-04-12 23:59:52] 2025-04-12 21:59:52,526 [wrapper] ==== wrapper stdout END ====
[2025-04-12 23:59:52] 2025-04-12 21:59:52,528 [wrapper] ==== wrapper stderr END ====
[2025-04-12 23:59:52]  *** Error codes and diagnostics ***
[2025-04-12 23:59:52]     "exeErrorCode": 0,
[2025-04-12 23:59:52]     "exeErrorDiag": "",
[2025-04-12 23:59:52]     "pilotErrorCode": 0,
[2025-04-12 23:59:52]     "pilotErrorDiag": "",
[2025-04-12 23:59:52]  *** Listing of results directory ***
[2025-04-12 23:59:52] total 409716
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc    495897 Apr 10 19:35 pilot3.tar.gz
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc      5111 Apr 10 19:45 queuedata.json
[2025-04-12 23:59:52] -rwx------ 1 boinc boinc     37140 Apr 10 19:46 runpilot2-wrapper.sh
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc       100 Apr 12 22:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 23:59:52] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 22:49 run_atlas
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc       105 Apr 12 22:49 job.xml
[2025-04-12 23:59:52] -rw-r--r-- 2 boinc boinc 223491075 Apr 12 22:49 EVNT.44075162._001165.pool.root.1
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc      6923 Apr 12 22:49 init_data.xml
[2025-04-12 23:59:52] drwxrwx--x 2 boinc boinc      4096 Apr 12 22:49 shared
[2025-04-12 23:59:52] -rw-r--r-- 2 boinc boinc    508882 Apr 12 22:49 input.tar.gz
[2025-04-12 23:59:52] -rw-r--r-- 2 boinc boinc     17569 Apr 12 22:49 start_atlas.sh
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc         0 Apr 12 22:49 boinc_lockfile
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc      2550 Apr 12 22:49 pandaJob.out
[2025-04-12 23:59:52] -rw------- 1 boinc boinc       424 Apr 12 22:49 setup.sh.local
[2025-04-12 23:59:52] -rw------- 1 boinc boinc    985800 Apr 12 22:49 agis_schedconf.cvmfs.json
[2025-04-12 23:59:52] -rw------- 1 boinc boinc   1603529 Apr 12 22:49 agis_ddmendpoints.agis.ALL.json
[2025-04-12 23:59:52] drwx------ 4 boinc boinc      4096 Apr 12 22:49 pilot3
[2025-04-12 23:59:52] -rw------- 1 boinc boinc 190921617 Apr 12 23:59 HITS.44075164._029373.pool.root.1
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc       529 Apr 12 23:59 boinc_task_state.xml
[2025-04-12 23:59:52] -rw------- 1 boinc boinc        95 Apr 12 23:59 pilot_heartbeat.json
[2025-04-12 23:59:52] -rw------- 1 boinc boinc      1016 Apr 12 23:59 memory_monitor_summary.json
[2025-04-12 23:59:52] -rw------- 1 boinc boinc    229628 Apr 12 23:59 log.44075164._029373.job.log.tgz.1
[2025-04-12 23:59:52] -rw------- 1 boinc boinc      7649 Apr 12 23:59 heartbeat.json
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc      8192 Apr 12 23:59 boinc_mmap_file
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc        27 Apr 12 23:59 wrapper_checkpoint.txt
[2025-04-12 23:59:52] -rw------- 1 boinc boinc      4552 Apr 12 23:59 pilotlog.txt
[2025-04-12 23:59:52] -rw------- 1 boinc boinc    413068 Apr 12 23:59 log.44075164._029373.job.log.1
[2025-04-12 23:59:52] -rw------- 1 boinc boinc       357 Apr 12 23:59 output.list
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc       620 Apr 12 23:59 runtime_log
[2025-04-12 23:59:52] -rw------- 1 boinc boinc    665600 Apr 12 23:59 result.tar.gz
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc     11104 Apr 12 23:59 runtime_log.err
[2025-04-12 23:59:52] -rw------- 1 boinc boinc       660 Apr 12 23:59 NcGKDm59AN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjsOLDm6dGrJm.diag
[2025-04-12 23:59:52] -rw-r--r-- 1 boinc boinc     21546 Apr 12 23:59 stderr.txt
[2025-04-12 23:59:52] HITS file was successfully produced:
[2025-04-12 23:59:52] -rw------- 1 boinc boinc 190921617 Apr 12 23:59 shared/HITS.pool.root.1
[2025-04-12 23:59:52]  *** Contents of shared directory: ***
[2025-04-12 23:59:52] total 405884
[2025-04-12 23:59:52] -rw-r--r-- 2 boinc boinc 223491075 Apr 12 22:49 ATLAS.root_0
[2025-04-12 23:59:52] -rw-r--r-- 2 boinc boinc    508882 Apr 12 22:49 input.tar.gz
[2025-04-12 23:59:52] -rw-r--r-- 2 boinc boinc     17569 Apr 12 22:49 start_atlas.sh
[2025-04-12 23:59:52] -rw------- 1 boinc boinc 190921617 Apr 12 23:59 HITS.pool.root.1
[2025-04-12 23:59:52] -rw------- 1 boinc boinc    665600 Apr 12 23:59 result.tar.gz
23:59:54 (2407538): run_atlas exited; CPU time 14089.881173
23:59:54 (2407538): called boinc_finish(0)

</stderr_txt>
]]>

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