Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:00:28 (377): wrapper (7.7.26015): starting
06:00:28 (377): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 06:00:28] Arguments: --nthreads 12
[2025-04-12 06:00:28] Threads: 12
[2025-04-12 06:00:28] Checking for CVMFS
[2025-04-12 06:00:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 06:00:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 06:00:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 06:00:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 06:00:32] 2.11.2.0 24713 216652 77740 144776 0 521 13858562 18432001 5556 130560 0 18815223 99.319 33624695 39955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 06:00:32] CVMFS is ok
[2025-04-12 06:00:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 06:00:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 06:00:32] Further information can be found at the LHC@home message board.
[2025-04-12 06:00:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 06:00:32] Checking for apptainer binary...
[2025-04-12 06:00:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 06:00:32] Running /usr/bin/apptainer --version
[2025-04-12 06:00:40] apptainer version 1.3.2-1.el7
[2025-04-12 06:00:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 06:01:29] INFO: fuse-overlayfs mount took an unexpectedly long time: 4.325s c-206-3.aglt2.org
[2025-04-12 06:01:29] apptainer works
[2025-04-12 06:01:29] Set ATHENA_PROC_NUMBER=12
[2025-04-12 06:01:29] Set ATHENA_CORE_NUMBER=12
[2025-04-12 06:01:29] Starting ATLAS job with PandaID=6586323680
[2025-04-12 06:01:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 08:57:24]  *** The last 200 lines of the pilot log: ***
[2025-04-13 08:57:24] 2025-04-13 12:56:46,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 08:57:24] 2025-04-13 12:56:46,701 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-13 08:57:24] 2025-04-13 12:56:48,796 | INFO     | PID=11107 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-13 08:57:24] 2025-04-13 12:56:48,797 | INFO     | .. there are 4 such processes running
[2025-04-13 08:57:24] 2025-04-13 12:56:49,008 | INFO     | monitor loop #5418: job 0:6586323680 is in state 'finished'
[2025-04-13 08:57:24] 2025-04-13 12:56:49,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 08:57:24] 2025-04-13 12:56:51,517 | INFO     | monitor loop #5419: job 0:6586323680 is in state 'finished'
[2025-04-13 08:57:24] 2025-04-13 12:56:51,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 08:57:24] 2025-04-13 12:56:54,024 | INFO     | monitor loop #5420: job 0:6586323680 is in state 'finished'
[2025-04-13 08:57:24] 2025-04-13 12:56:54,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 08:57:24] 2025-04-13 12:56:56,544 | INFO     | monitor loop #5421: job 0:6586323680 is in state 'finished'
[2025-04-13 08:57:24] 2025-04-13 12:56:56,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 08:57:24] 2025-04-13 12:56:59,048 | INFO     | monitor loop #5422: job 0:6586323680 is in state 'finished'
[2025-04-13 08:57:24] 2025-04-13 12:56:59,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 08:57:24] 2025-04-13 12:57:00,973 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-13 08:57:24] 2025-04-13 12:57:00,973 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6586323680/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 08:57:24] 2025-04-13 12:57:00,974 | INFO     | extracted standard info from prmon json
[2025-04-13 08:57:24] 2025-04-13 12:57:00,975 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 08:57:24] 2025-04-13 12:57:00,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 08:57:24] 2025-04-13 12:57:00,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 08:57:24] 2025-04-13 12:57:00,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 08:57:24] 2025-04-13 12:57:01,146 | INFO     | fitting pss+swap vs Time
[2025-04-13 08:57:24] 2025-04-13 12:57:01,149 | INFO     | sum of square deviations: 1209173706741.8306
[2025-04-13 08:57:24] 2025-04-13 12:57:01,242 | INFO     | sum of deviations: 9593361224477.947
[2025-04-13 08:57:24] 2025-04-13 12:57:01,242 | INFO     | mean x: 1744500974.4517155
[2025-04-13 08:57:24] 2025-04-13 12:57:01,242 | INFO     | mean y: 2621990.3151207115
[2025-04-13 08:57:24] 2025-04-13 12:57:01,243 | INFO     | -- intersect: -13837927064.844154
[2025-04-13 08:57:24] 2025-04-13 12:57:01,243 | INFO     | intersect: -13837927064.844154
[2025-04-13 08:57:24] 2025-04-13 12:57:01,274 | INFO     | chi2: 42.974074727398815
[2025-04-13 08:57:24] 2025-04-13 12:57:01,277 | INFO     | sum of square deviations: 1197687371509.7837
[2025-04-13 08:57:24] 2025-04-13 12:57:01,370 | INFO     | sum of deviations: 10037192966701.32
[2025-04-13 08:57:24] 2025-04-13 12:57:01,370 | INFO     | mean x: 1744500821.9547482
[2025-04-13 08:57:24] 2025-04-13 12:57:01,371 | INFO     | mean y: 2627878.8355640536
[2025-04-13 08:57:24] 2025-04-13 12:57:01,371 | INFO     | -- intersect: -14617123315.882479
[2025-04-13 08:57:24] 2025-04-13 12:57:01,371 | INFO     | intersect: -14617123315.882479
[2025-04-13 08:57:24] 2025-04-13 12:57:01,374 | INFO     | chi2: 39.7701734023042
[2025-04-13 08:57:24] 2025-04-13 12:57:01,374 | INFO     | current chi2=39.7701734023042 (change=7.455428291169033 %)
[2025-04-13 08:57:24] 2025-04-13 12:57:01,374 | INFO     | right removable region: 1568
[2025-04-13 08:57:24] 2025-04-13 12:57:01,377 | INFO     | sum of square deviations: 1197686457729.7832
[2025-04-13 08:57:24] 2025-04-13 12:57:01,482 | INFO     | sum of deviations: 8968974679060.092
[2025-04-13 08:57:24] 2025-04-13 12:57:01,483 | INFO     | mean x: 1744501126.9547482
[2025-04-13 08:57:24] 2025-04-13 12:57:01,483 | INFO     | mean y: 2630279.5086042066
[2025-04-13 08:57:24] 2025-04-13 12:57:01,483 | INFO     | -- intersect: -13061211541.752934
[2025-04-13 08:57:24] 2025-04-13 12:57:01,483 | INFO     | intersect: -13061211541.752934
[2025-04-13 08:57:24] 2025-04-13 12:57:01,486 | INFO     | chi2: 37.51786242494932
[2025-04-13 08:57:24] 2025-04-13 12:57:01,486 | INFO     | current chi2=37.51786242494932 (change=12.696520721063479 %)
[2025-04-13 08:57:24] 2025-04-13 12:57:01,487 | INFO     | left removable region: 10
[2025-04-13 08:57:24] 2025-04-13 12:57:01,489 | INFO     | sum of square deviations: 1172672257047.1128
[2025-04-13 08:57:24] 2025-04-13 12:57:01,572 | INFO     | sum of deviations: 8828165107568.707
[2025-04-13 08:57:24] 2025-04-13 12:57:01,572 | INFO     | mean x: 1744501096.4608471
[2025-04-13 08:57:24] 2025-04-13 12:57:01,572 | INFO     | mean y: 2643850.150834403
[2025-04-13 08:57:24] 2025-04-13 12:57:01,573 | INFO     | -- intersect: -13130389371.485506
[2025-04-13 08:57:24] 2025-04-13 12:57:01,573 | INFO     | intersect: -13130389371.485506
[2025-04-13 08:57:24] 2025-04-13 12:57:01,575 | INFO     | chi2: 29.745510122222136
[2025-04-13 08:57:24] 2025-04-13 12:57:01,575 | INFO     | -- intersect: -13130389371.485506
[2025-04-13 08:57:24] 2025-04-13 12:57:01,576 | INFO     | current memory leak: 7.53 B/s (using 1558 data points, chi2=29.75)
[2025-04-13 08:57:24] 2025-04-13 12:57:01,578 | INFO     | ..............................
[2025-04-13 08:57:24] 2025-04-13 12:57:01,578 | INFO     | . Timing measurements:
[2025-04-13 08:57:24] 2025-04-13 12:57:01,578 | INFO     | . get job = 1 s
[2025-04-13 08:57:24] 2025-04-13 12:57:01,578 | INFO     | . initial setup = 34 s
[2025-04-13 08:57:24] 2025-04-13 12:57:01,578 | INFO     | . payload setup = 191 s
[2025-04-13 08:57:24] 2025-04-13 12:57:01,579 | INFO     | . stage-in = 3 s
[2025-04-13 08:57:24] 2025-04-13 12:57:01,579 | INFO     | . payload execution = 96196 s
[2025-04-13 08:57:24] 2025-04-13 12:57:01,579 | INFO     | . stage-out = 18 s
[2025-04-13 08:57:24] 2025-04-13 12:57:01,579 | INFO     | . log creation = 1 s
[2025-04-13 08:57:24] 2025-04-13 12:57:01,579 | INFO     | ..............................
[2025-04-13 08:57:24] 2025-04-13 12:57:01,578 | INFO     | monitor loop #5423: job 0:6586323680 is in state 'finished'
[2025-04-13 08:57:24] 2025-04-13 12:57:01,590 | WARNING  | exception caught: deque index out of range
[2025-04-13 08:57:24] 2025-04-13 12:57:01,945 | INFO     | 
[2025-04-13 08:57:24] 2025-04-13 12:57:01,968 | INFO     | job summary report
[2025-04-13 08:57:24] 2025-04-13 12:57:01,972 | INFO     | --------------------------------------------------
[2025-04-13 08:57:24] 2025-04-13 12:57:01,972 | INFO     | PanDA job id: 6586323680
[2025-04-13 08:57:24] 2025-04-13 12:57:01,973 | INFO     | task id: 43634898
[2025-04-13 08:57:24] 2025-04-13 12:57:01,973 | INFO     | errors: (none)
[2025-04-13 08:57:24] 2025-04-13 12:57:01,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 08:57:24] 2025-04-13 12:57:01,973 | INFO     | pilot state: finished 
[2025-04-13 08:57:24] 2025-04-13 12:57:01,973 | INFO     | transexitcode: 0
[2025-04-13 08:57:24] 2025-04-13 12:57:01,973 | INFO     | exeerrorcode: 0
[2025-04-13 08:57:24] 2025-04-13 12:57:01,974 | INFO     | exeerrordiag: 
[2025-04-13 08:57:24] 2025-04-13 12:57:01,974 | INFO     | exitcode: 0
[2025-04-13 08:57:24] 2025-04-13 12:57:01,974 | INFO     | exitmsg: OK
[2025-04-13 08:57:24] 2025-04-13 12:57:01,974 | INFO     | cpuconsumptiontime: 170716 s
[2025-04-13 08:57:24] 2025-04-13 12:57:01,974 | INFO     | nevents: 400
[2025-04-13 08:57:24] 2025-04-13 12:57:01,974 | INFO     | neventsw: 0
[2025-04-13 08:57:24] 2025-04-13 12:57:01,974 | INFO     | pid: 24522
[2025-04-13 08:57:24] 2025-04-13 12:57:01,975 | INFO     | pgrp: 24522
[2025-04-13 08:57:24] 2025-04-13 12:57:01,975 | INFO     | corecount: 12
[2025-04-13 08:57:24] 2025-04-13 12:57:01,975 | INFO     | event service: False
[2025-04-13 08:57:24] 2025-04-13 12:57:01,975 | INFO     | sizes: {0: 2416570, 2: 2417255, 3: 2417283, 5: 2417510, 6: 2417510, 17: 2417538, 29: 2417694, 41: 2417722, 54: 2417750, 68: 2417778, 82: 2417806, 97: 2418288, 101:
[2025-04-13 08:57:24] 2025-04-13 12:57:01,975 | INFO     | --------------------------------------------------
[2025-04-13 08:57:24] 2025-04-13 12:57:01,975 | INFO     | 
[2025-04-13 08:57:24] 2025-04-13 12:57:01,976 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-13 08:57:24] 2025-04-13 12:57:02,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 08:57:24] 2025-04-13 12:57:02,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 08:57:24] 2025-04-13 12:57:02,036 | INFO     | job 6586323680 has completed (purged errors)
[2025-04-13 08:57:24] 2025-04-13 12:57:02,036 | INFO     | overall cleanup function is called
[2025-04-13 08:57:24] 2025-04-13 12:57:03,048 | INFO     | --- collectZombieJob: --- 10, [24522]
[2025-04-13 08:57:24] 2025-04-13 12:57:03,048 | INFO     | zombie collector waiting for pid 24522
[2025-04-13 08:57:24] 2025-04-13 12:57:03,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 08:57:24] 2025-04-13 12:57:03,049 | INFO     | collected zombie processes
[2025-04-13 08:57:24] 2025-04-13 12:57:03,049 | INFO     | will attempt to kill all subprocesses of pid=24522
[2025-04-13 08:57:24] 2025-04-13 12:57:03,293 | INFO     | process IDs to be killed: [24522] (in reverse order)
[2025-04-13 08:57:24] 2025-04-13 12:57:04,129 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 08:57:24] 2025-04-13 12:57:04,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 08:57:24] 2025-04-13 12:57:04,145 | INFO     | did not find any defunct processes belonging to 24522
[2025-04-13 08:57:24] 2025-04-13 12:57:04,150 | INFO     | did not find any defunct processes belonging to 24522
[2025-04-13 08:57:24] 2025-04-13 12:57:04,150 | INFO     | ready for new job
[2025-04-13 08:57:24] 2025-04-13 12:57:04,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 08:57:24] 2025-04-13 12:57:04,154 | INFO     | **************************************
[2025-04-13 08:57:24] 2025-04-13 12:57:04,154 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 08:57:24] 2025-04-13 12:57:04,154 | INFO     | **************************************
[2025-04-13 08:57:24] 2025-04-13 12:57:04,156 | INFO     | 
[2025-04-13 08:57:24] 2025-04-13 12:57:04,158 | INFO     | architecture information:
[2025-04-13 08:57:24] 2025-04-13 12:57:04,158 | INFO     | executing command: cat /etc/os-release
[2025-04-13 08:57:24] 2025-04-13 12:57:04,307 | INFO     | cat /etc/os-release:
[2025-04-13 08:57:24] NAME="CentOS Linux"
[2025-04-13 08:57:24] VERSION="7 (Core)"
[2025-04-13 08:57:24] ID="centos"
[2025-04-13 08:57:24] ID_LIKE="rhel fedora"
[2025-04-13 08:57:24] VERSION_ID="7"
[2025-04-13 08:57:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 08:57:24] ANSI_COLOR="0;31"
[2025-04-13 08:57:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 08:57:24] HOME_URL="https://www.centos.org/"
[2025-04-13 08:57:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 08:57:24] 
[2025-04-13 08:57:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 08:57:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 08:57:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 08:57:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 08:57:24] 
[2025-04-13 08:57:24] 2025-04-13 12:57:04,307 | INFO     | **************************************
[2025-04-13 08:57:24] 2025-04-13 12:57:04,810 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-13 08:57:24] 2025-04-13 12:57:04,827 | INFO     | sufficient remaining disk space (28295823360 B)
[2025-04-13 08:57:24] 2025-04-13 12:57:04,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 08:57:24] 2025-04-13 12:57:04,827 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 08:57:24] 2025-04-13 12:57:04,827 | INFO     | update_server=False
[2025-04-13 08:57:24] 2025-04-13 12:57:04,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 08:57:24] 2025-04-13 12:57:04,843 | INFO     | all data control threads have been joined
[2025-04-13 08:57:24] 2025-04-13 12:57:04,855 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 08:57:24] 2025-04-13 12:57:04,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 08:57:24] 2025-04-13 12:57:04,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 08:57:24] 2025-04-13 12:57:05,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 08:57:24] 2025-04-13 12:57:05,100 | INFO     | aborting loop
[2025-04-13 08:57:24] 2025-04-13 12:57:05,529 | INFO     | all job control threads have been joined
[2025-04-13 08:57:24] 2025-04-13 12:57:05,833 | INFO     | [job] retrieve thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:05,848 | INFO     | [data] control thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:05,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 08:57:24] 2025-04-13 12:57:05,997 | INFO     | [data] copytool_in thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:06,035 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:06,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:06,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 08:57:24] 2025-04-13 12:57:06,106 | INFO     | [job] job monitor thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:06,160 | INFO     | all payload control threads have been joined
[2025-04-13 08:57:24] 2025-04-13 12:57:06,535 | INFO     | [job] control thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:06,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 08:57:24] 2025-04-13 12:57:06,956 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:06,974 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:06,994 | INFO     | [job] validate thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:07,008 | INFO     | [payload] failed_post thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:07,026 | INFO     | [payload] validate_post thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:07,166 | INFO     | [payload] control thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:07,750 | INFO     | [job] queue monitor thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:08,107 | INFO     | [data] copytool_out thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:09,939 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 08:57:24] 2025-04-13 12:57:10,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644570298176)>', '<ExcThread(monitor, started 140644351792896)>']
[2025-04-13 08:57:24] 2025-04-13 12:57:10,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 08:57:24] 2025-04-13 12:57:10,890 | INFO     | [monitor] control thread has ended
[2025-04-13 08:57:24] 2025-04-13 12:57:15,914 | INFO     | all workflow threads have been joined
[2025-04-13 08:57:24] 2025-04-13 12:57:15,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 08:57:24] 2025-04-13 12:57:15,924 | INFO     | traces error code: 0
[2025-04-13 08:57:24] 2025-04-13 12:57:15,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 08:57:24] 2025-04-13 12:57:19,114 [wrapper] ==== pilot stdout END ====
[2025-04-13 08:57:24] 2025-04-13 12:57:19,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 08:57:24] 2025-04-13 12:57:19,121 [wrapper] pilotpid: 11107
[2025-04-13 08:57:24] 2025-04-13 12:57:19,125 [wrapper] Pilot exit status: 0
[2025-04-13 08:57:24] 2025-04-13 12:57:19,534 [wrapper] pandaids: 6586323680
[2025-04-13 08:57:24] 2025-04-13 12:57:19,668 [wrapper] cleanup supervisor_pilot 26048 11108
[2025-04-13 08:57:24] 2025-04-13 12:57:19,672 [wrapper] Test setup, not cleaning
[2025-04-13 08:57:24] 2025-04-13 12:57:19,676 [wrapper] apfmon messages muted
[2025-04-13 08:57:24] 2025-04-13 12:57:19,679 [wrapper] ==== wrapper stdout END ====
[2025-04-13 08:57:24] 2025-04-13 12:57:19,683 [wrapper] ==== wrapper stderr END ====
[2025-04-13 08:57:24]  *** Error codes and diagnostics ***
[2025-04-13 08:57:24]     "exeErrorCode": 0,
[2025-04-13 08:57:24]     "exeErrorDiag": "",
[2025-04-13 08:57:24]     "pilotErrorCode": 0,
[2025-04-13 08:57:24]     "pilotErrorDiag": "",
[2025-04-13 08:57:24]  *** Listing of results directory ***
[2025-04-13 08:57:24] total 700864
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 16:23 pilot3.tar.gz
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 16:49 queuedata.json
[2025-04-13 08:57:24] -rwx------ 1 boincer umatlas     37140 Apr  3 16:49 runpilot2-wrapper.sh
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas       100 Apr 12 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 08:57:24] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 05:59 run_atlas
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas       105 Apr 12 05:59 job.xml
[2025-04-13 08:57:24] -rw-r--r-- 2 boincer umatlas 362883857 Apr 12 06:00 EVNT.43634896._000674.pool.root.1
[2025-04-13 08:57:24] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 06:00 start_atlas.sh
[2025-04-13 08:57:24] drwxrwx--x 2 boincer umatlas      4096 Apr 12 06:00 shared
[2025-04-13 08:57:24] -rw-r--r-- 2 boincer umatlas    508888 Apr 12 06:00 input.tar.gz
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas         0 Apr 12 06:00 boinc_lockfile
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas      2599 Apr 12 06:01 pandaJob.out
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas       424 Apr 12 06:01 setup.sh.local
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas    986068 Apr 12 06:05 agis_schedconf.cvmfs.json
[2025-04-13 08:57:24] drwx------ 4 boincer umatlas      4096 Apr 12 06:06 pilot3
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas 334485597 Apr 13 08:44 HITS.43634898._017580.pool.root.1
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas      5866 Apr 13 08:48 init_data.xml
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas       533 Apr 13 08:52 boinc_task_state.xml
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas      1069 Apr 13 08:56 memory_monitor_summary.json
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas        95 Apr 13 08:56 pilot_heartbeat.json
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas   1603529 Apr 13 08:56 agis_ddmendpoints.agis.ALL.json
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas   1119185 Apr 13 08:56 log.43634898._017580.job.log.tgz.1
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas      7794 Apr 13 08:57 heartbeat.json
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas      4353 Apr 13 08:57 pilotlog.txt
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas   7121285 Apr 13 08:57 log.43634898._017580.job.log.1
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas       357 Apr 13 08:57 output.list
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas       620 Apr 13 08:57 runtime_log
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas   8263680 Apr 13 08:57 result.tar.gz
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas       668 Apr 13 08:57 gKcNDmJggK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1zHLDmGUMlqn.diag
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 08:57 boinc_mmap_file
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas        29 Apr 13 08:57 wrapper_checkpoint.txt
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas     11125 Apr 13 08:57 runtime_log.err
[2025-04-13 08:57:24] -rw-r--r-- 1 boincer umatlas      9148 Apr 13 08:57 stderr.txt
[2025-04-13 08:57:24] HITS file was successfully produced:
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas 334485597 Apr 13 08:44 shared/HITS.pool.root.1
[2025-04-13 08:57:24]  *** Contents of shared directory: ***
[2025-04-13 08:57:24] total 689624
[2025-04-13 08:57:24] -rw-r--r-- 2 boincer umatlas 362883857 Apr 12 06:00 ATLAS.root_0
[2025-04-13 08:57:24] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 06:00 start_atlas.sh
[2025-04-13 08:57:24] -rw-r--r-- 2 boincer umatlas    508888 Apr 12 06:00 input.tar.gz
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas 334485597 Apr 13 08:44 HITS.pool.root.1
[2025-04-13 08:57:24] -rw------- 1 boincer umatlas   8263680 Apr 13 08:57 result.tar.gz
08:57:25 (377): run_atlas exited; CPU time 172628.925101
08:57:25 (377): called boinc_finish(0)

</stderr_txt>
]]>

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