Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:15:35 (2655486): wrapper (7.7.26015): starting
11:15:35 (2655486): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 11:15:35] Arguments: --nthreads 12
[2025-04-12 11:15:35] Threads: 12
[2025-04-12 11:15:35] Checking for CVMFS
[2025-04-12 11:15:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 11:15:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 11:15:35] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 11:15:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 11:15:36] 2.12.6.0 4038419 1837 85376 144776 3 187 3795669 4096000 13203 130560 0 6355737 99.999 155303 759 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-12 11:15:36] CVMFS is ok
[2025-04-12 11:15:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 11:15:36] Checking for apptainer binary...
[2025-04-12 11:15:36] apptainer is not installed, using version from CVMFS
[2025-04-12 11:15:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 11:15:36] epyc7v12
[2025-04-12 11:15:36] apptainer works
[2025-04-12 11:15:36] Set ATHENA_PROC_NUMBER=12
[2025-04-12 11:15:36] Set ATHENA_CORE_NUMBER=12
[2025-04-12 11:15:36] Starting ATLAS job with PandaID=6586321967
[2025-04-12 11:15:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 15:04:09]  *** The last 200 lines of the pilot log: ***
[2025-04-12 15:04:09] 2025-04-12 15:03:45,556 | INFO     | extracted standard info from prmon json
[2025-04-12 15:04:09] 2025-04-12 15:03:45,556 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 15:04:09] 2025-04-12 15:03:45,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 15:04:09] 2025-04-12 15:03:45,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 15:04:09] 2025-04-12 15:03:45,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 15:04:09] 2025-04-12 15:03:45,565 | INFO     | fitting pss+swap vs Time
[2025-04-12 15:04:09] 2025-04-12 15:03:45,566 | INFO     | sum of square deviations: 3438737894.1972914
[2025-04-12 15:04:09] 2025-04-12 15:03:45,579 | INFO     | sum of deviations: 153879955230.1302
[2025-04-12 15:04:09] 2025-04-12 15:03:45,579 | INFO     | mean x: 1744463345.1121075
[2025-04-12 15:04:09] 2025-04-12 15:03:45,579 | INFO     | mean y: 2625073.914798206
[2025-04-12 15:04:09] 2025-04-12 15:03:45,579 | INFO     | -- intersect: -78060300832.5437
[2025-04-12 15:04:09] 2025-04-12 15:03:45,579 | INFO     | intersect: -78060300832.5437
[2025-04-12 15:04:09] 2025-04-12 15:03:45,580 | INFO     | chi2: 7.0568393329046994
[2025-04-12 15:04:09] 2025-04-12 15:03:45,580 | INFO     | sum of square deviations: 3212578959.8578095
[2025-04-12 15:04:09] 2025-04-12 15:03:45,582 | INFO     | sum of deviations: 183660542113.08252
[2025-04-12 15:04:09] 2025-04-12 15:03:45,582 | INFO     | mean x: 1744463192.6100917
[2025-04-12 15:04:09] 2025-04-12 15:03:45,582 | INFO     | mean y: 2644841.871559633
[2025-04-12 15:04:09] 2025-04-12 15:03:45,582 | INFO     | -- intersect: -99726905670.17833
[2025-04-12 15:04:09] 2025-04-12 15:03:45,582 | INFO     | intersect: -99726905670.17833
[2025-04-12 15:04:09] 2025-04-12 15:03:45,587 | INFO     | chi2: 5.361793730298888
[2025-04-12 15:04:09] 2025-04-12 15:03:45,587 | INFO     | current chi2=5.361793730298888 (change=24.019897898229548 %)
[2025-04-12 15:04:09] 2025-04-12 15:03:45,587 | INFO     | right removable region: 217
[2025-04-12 15:04:09] 2025-04-12 15:03:45,587 | INFO     | sum of square deviations: 3212577191.633015
[2025-04-12 15:04:09] 2025-04-12 15:03:45,589 | INFO     | sum of deviations: 88830253427.06421
[2025-04-12 15:04:09] 2025-04-12 15:03:45,589 | INFO     | mean x: 1744463497.6146789
[2025-04-12 15:04:09] 2025-04-12 15:03:45,589 | INFO     | mean y: 2668856.4174311925
[2025-04-12 15:04:09] 2025-04-12 15:03:45,589 | INFO     | -- intersect: -48233101163.665726
[2025-04-12 15:04:09] 2025-04-12 15:03:45,589 | INFO     | intersect: -48233101163.665726
[2025-04-12 15:04:09] 2025-04-12 15:03:45,590 | INFO     | chi2: 4.224804658165337
[2025-04-12 15:04:09] 2025-04-12 15:03:45,590 | INFO     | current chi2=4.224804658165337 (change=40.13177204607909 %)
[2025-04-12 15:04:09] 2025-04-12 15:03:45,590 | INFO     | sum of square deviations: 2996556214.065713
[2025-04-12 15:04:09] 2025-04-12 15:03:45,592 | INFO     | sum of deviations: 33321392136.765266
[2025-04-12 15:04:09] 2025-04-12 15:03:45,592 | INFO     | mean x: 1744463650.1173708
[2025-04-12 15:04:09] 2025-04-12 15:03:45,592 | INFO     | mean y: 2708048.0093896715
[2025-04-12 15:04:09] 2025-04-12 15:03:45,592 | INFO     | -- intersect: -19395545547.582623
[2025-04-12 15:04:09] 2025-04-12 15:03:45,593 | INFO     | intersect: -19395545547.582623
[2025-04-12 15:04:09] 2025-04-12 15:03:45,593 | INFO     | chi2: 2.325754952355532
[2025-04-12 15:04:09] 2025-04-12 15:03:45,593 | INFO     | current chi2=2.325754952355532 (change=44.9500002831962 %)
[2025-04-12 15:04:09] 2025-04-12 15:03:45,593 | INFO     | sum of square deviations: 2790442398.9951987
[2025-04-12 15:04:09] 2025-04-12 15:03:45,595 | INFO     | sum of deviations: 10248822067.975965
[2025-04-12 15:04:09] 2025-04-12 15:03:45,595 | INFO     | mean x: 1744463802.6201923
[2025-04-12 15:04:09] 2025-04-12 15:03:45,595 | INFO     | mean y: 2725072.1009615385
[2025-04-12 15:04:09] 2025-04-12 15:03:45,595 | INFO     | -- intersect: -6404394861.10998
[2025-04-12 15:04:09] 2025-04-12 15:03:45,595 | INFO     | intersect: -6404394861.10998
[2025-04-12 15:04:09] 2025-04-12 15:03:45,596 | INFO     | chi2: 2.012536689312678
[2025-04-12 15:04:09] 2025-04-12 15:03:45,596 | INFO     | current chi2=2.012536689312678 (change=13.467380246815155 %)
[2025-04-12 15:04:09] 2025-04-12 15:03:45,596 | INFO     | left removable region: 30
[2025-04-12 15:04:09] 2025-04-12 15:03:45,596 | INFO     | sum of square deviations: 2027720906.171118
[2025-04-12 15:04:09] 2025-04-12 15:03:45,597 | INFO     | sum of deviations: 12885415691.368984
[2025-04-12 15:04:09] 2025-04-12 15:03:45,598 | INFO     | mean x: 1744464077.1229947
[2025-04-12 15:04:09] 2025-04-12 15:03:45,598 | INFO     | mean y: 2772138.9839572194
[2025-04-12 15:04:09] 2025-04-12 15:03:45,598 | INFO     | -- intersect: -11082651266.170418
[2025-04-12 15:04:09] 2025-04-12 15:03:45,598 | INFO     | intersect: -11082651266.170418
[2025-04-12 15:04:09] 2025-04-12 15:03:45,598 | INFO     | chi2: 0.003652685776846563
[2025-04-12 15:04:09] 2025-04-12 15:03:45,598 | INFO     | -- intersect: -11082651266.170418
[2025-04-12 15:04:09] 2025-04-12 15:03:45,599 | INFO     | current memory leak: 6.35 B/s (using 187 data points, chi2=0.00)
[2025-04-12 15:04:09] 2025-04-12 15:03:45,599 | INFO     | ..............................
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | . Timing measurements:
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | . get job = 0 s
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | . initial setup = 2 s
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | . payload setup = 6 s
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | . stage-in = 0 s
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | . payload execution = 13560 s
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | . stage-out = 4 s
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | . log creation = 1 s
[2025-04-12 15:04:09] 2025-04-12 15:03:45,600 | INFO     | ..............................
[2025-04-12 15:04:09] 2025-04-12 15:03:46,223 | INFO     | 
[2025-04-12 15:04:09] 2025-04-12 15:03:46,223 | INFO     | job summary report
[2025-04-12 15:04:09] 2025-04-12 15:03:46,223 | INFO     | --------------------------------------------------
[2025-04-12 15:04:09] 2025-04-12 15:03:46,223 | INFO     | PanDA job id: 6586321967
[2025-04-12 15:04:09] 2025-04-12 15:03:46,223 | INFO     | task id: 43634898
[2025-04-12 15:04:09] 2025-04-12 15:03:46,223 | INFO     | errors: (none)
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | pilot state: finished 
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | transexitcode: 0
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | exeerrorcode: 0
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | exeerrordiag: 
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | exitcode: 0
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | exitmsg: OK
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | cpuconsumptiontime: 78795 s
[2025-04-12 15:04:09] 2025-04-12 15:03:46,224 | INFO     | nevents: 400
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | neventsw: 0
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | pid: 2697640
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | pgrp: 2697640
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | corecount: 12
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | event service: False
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | sizes: {0: 2417423, 5: 2417629, 11: 2417685, 13571: 2447769, 13577: 2456758, 13580: 2456842, 13662: 2457140}
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | --------------------------------------------------
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | 
[2025-04-12 15:04:09] 2025-04-12 15:03:46,225 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/11
[2025-04-12 15:04:09] 2025-04-12 15:03:46,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,662 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 15:04:09] 2025-04-12 15:03:46,663 | INFO     | job 6586321967 has completed (purged errors)
[2025-04-12 15:04:09] 2025-04-12 15:03:46,663 | INFO     | overall cleanup function is called
[2025-04-12 15:04:09] 2025-04-12 15:03:47,683 | INFO     | --- collectZombieJob: --- 10, [2697640]
[2025-04-12 15:04:09] 2025-04-12 15:03:47,683 | INFO     | zombie collector waiting for pid 2697640
[2025-04-12 15:04:09] 2025-04-12 15:03:47,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 15:04:09] 2025-04-12 15:03:47,683 | INFO     | collected zombie processes
[2025-04-12 15:04:09] 2025-04-12 15:03:47,683 | INFO     | will attempt to kill all subprocesses of pid=2697640
[2025-04-12 15:04:09] 2025-04-12 15:03:48,921 | INFO     | process IDs to be killed: [2697640] (in reverse order)
[2025-04-12 15:04:09] 2025-04-12 15:03:53,223 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 15:04:09] 2025-04-12 15:03:53,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 15:04:09] 2025-04-12 15:03:53,263 | INFO     | did not find any defunct processes belonging to 2697640
[2025-04-12 15:04:09] 2025-04-12 15:03:53,302 | INFO     | did not find any defunct processes belonging to 2697640
[2025-04-12 15:04:09] 2025-04-12 15:03:53,302 | INFO     | ready for new job
[2025-04-12 15:04:09] 2025-04-12 15:03:53,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 15:04:09] 2025-04-12 15:03:53,308 | INFO     | **************************************
[2025-04-12 15:04:09] 2025-04-12 15:03:53,309 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 15:04:09] 2025-04-12 15:03:53,309 | INFO     | **************************************
[2025-04-12 15:04:09] 2025-04-12 15:03:53,309 | INFO     | 
[2025-04-12 15:04:09] 2025-04-12 15:03:53,328 | INFO     | architecture information:
[2025-04-12 15:04:09] 2025-04-12 15:03:53,335 | INFO     | executing command: cat /etc/os-release
[2025-04-12 15:04:09] 2025-04-12 15:03:53,503 | INFO     | cat /etc/os-release:
[2025-04-12 15:04:09] NAME="CentOS Linux"
[2025-04-12 15:04:09] VERSION="7 (Core)"
[2025-04-12 15:04:09] ID="centos"
[2025-04-12 15:04:09] ID_LIKE="rhel fedora"
[2025-04-12 15:04:09] VERSION_ID="7"
[2025-04-12 15:04:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 15:04:09] ANSI_COLOR="0;31"
[2025-04-12 15:04:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 15:04:09] HOME_URL="https://www.centos.org/"
[2025-04-12 15:04:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 15:04:09] 
[2025-04-12 15:04:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 15:04:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 15:04:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 15:04:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 15:04:09] 
[2025-04-12 15:04:09] 2025-04-12 15:03:53,504 | INFO     | **************************************
[2025-04-12 15:04:09] 2025-04-12 15:03:54,007 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/11
[2025-04-12 15:04:09] 2025-04-12 15:03:54,181 | INFO     | sufficient remaining disk space (315020541952 B)
[2025-04-12 15:04:09] 2025-04-12 15:03:54,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 15:04:09] 2025-04-12 15:03:54,182 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 15:04:09] 2025-04-12 15:03:54,182 | INFO     | update_server=False
[2025-04-12 15:04:09] 2025-04-12 15:03:54,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 15:04:09] 2025-04-12 15:03:54,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 15:04:09] 2025-04-12 15:03:54,791 | INFO     | all data control threads have been joined
[2025-04-12 15:04:09] 2025-04-12 15:03:54,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 15:04:09] 2025-04-12 15:03:55,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 15:04:09] 2025-04-12 15:03:55,023 | INFO     | aborting loop
[2025-04-12 15:04:09] 2025-04-12 15:03:55,106 | INFO     | all payload control threads have been joined
[2025-04-12 15:04:09] 2025-04-12 15:03:55,188 | INFO     | [job] retrieve thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:55,247 | INFO     | [job] validate thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:55,301 | INFO     | all job control threads have been joined
[2025-04-12 15:04:09] 2025-04-12 15:03:55,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 15:04:09] 2025-04-12 15:03:55,507 | INFO     | [payload] validate_post thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:55,592 | INFO     | PID=2663521 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-12 15:04:09] 2025-04-12 15:03:55,593 | INFO     | .. there are 20 such processes running
[2025-04-12 15:04:09] 2025-04-12 15:03:55,593 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 15:04:09] 2025-04-12 15:03:55,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 15:04:09] 2025-04-12 15:03:55,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 15:04:09] 2025-04-12 15:03:55,611 | INFO     | [payload] failed_post thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:55,799 | INFO     | [data] control thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:55,800 | INFO     | [job] queue monitor thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:55,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:56,027 | INFO     | [job] job monitor thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:56,111 | INFO     | [payload] control thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:56,163 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:56,191 | INFO     | [data] copytool_out thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:56,227 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:56,227 | INFO     | [data] copytool_in thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:56,311 | INFO     | [job] control thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:56,703 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:03:59,411 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 15:04:09] 2025-04-12 15:04:01,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664142399296)>', '<ExcThread(monitor, started 139663704565504)>']
[2025-04-12 15:04:09] 2025-04-12 15:04:01,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 15:04:09] 2025-04-12 15:04:01,623 | INFO     | [monitor] control thread has ended
[2025-04-12 15:04:09] 2025-04-12 15:04:06,051 | INFO     | all workflow threads have been joined
[2025-04-12 15:04:09] 2025-04-12 15:04:06,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 15:04:09] 2025-04-12 15:04:06,051 | INFO     | traces error code: 0
[2025-04-12 15:04:09] 2025-04-12 15:04:06,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 15:04:09] 2025-04-12 15:04:06,324 [wrapper] ==== pilot stdout END ====
[2025-04-12 15:04:09] 2025-04-12 15:04:06,387 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 15:04:09] 2025-04-12 15:04:06,471 [wrapper] pilotpid: 2663521
[2025-04-12 15:04:09] 2025-04-12 15:04:06,485 [wrapper] Pilot exit status: 0
[2025-04-12 15:04:09] 2025-04-12 15:04:06,719 [wrapper] pandaids: 6586321967
[2025-04-12 15:04:09] 2025-04-12 15:04:07,323 [wrapper] cleanup supervisor_pilot 3441394 2663522
[2025-04-12 15:04:09] 2025-04-12 15:04:07,383 [wrapper] Test setup, not cleaning
[2025-04-12 15:04:09] 2025-04-12 15:04:07,456 [wrapper] apfmon messages muted
[2025-04-12 15:04:09] 2025-04-12 15:04:07,525 [wrapper] ==== wrapper stdout END ====
[2025-04-12 15:04:09] 2025-04-12 15:04:07,615 [wrapper] ==== wrapper stderr END ====
[2025-04-12 15:04:09]  *** Error codes and diagnostics ***
[2025-04-12 15:04:09]     "exeErrorCode": 0,
[2025-04-12 15:04:09]     "exeErrorDiag": "",
[2025-04-12 15:04:09]     "pilotErrorCode": 0,
[2025-04-12 15:04:09]     "pilotErrorDiag": "",
[2025-04-12 15:04:09]  *** Listing of results directory ***
[2025-04-12 15:04:09] total 672676
[2025-04-12 15:04:09] -rw-r--r-- 1 boinc boinc    495897 Apr  3 19:00 pilot3.tar.gz
[2025-04-12 15:04:09] -rwx------ 1 boinc boinc     37140 Apr  3 19:14 runpilot2-wrapper.sh
[2025-04-12 15:04:09] -rw-r--r-- 1 boinc boinc      5111 Apr  3 19:14 queuedata.json
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc       100 Apr 12 11:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 15:04:09] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 11:15 run_atlas
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc       105 Apr 12 11:15 job.xml
[2025-04-12 15:04:09] -rw-r--r-- 2 boinc boinc     17569 Apr 12 11:15 start_atlas.sh
[2025-04-12 15:04:09] drwxrwx--x 2 boinc boinc      4096 Apr 12 11:15 shared
[2025-04-12 15:04:09] -rw-r--r-- 2 boinc boinc    508883 Apr 12 11:15 input.tar.gz
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc      6941 Apr 12 11:15 init_data.xml
[2025-04-12 15:04:09] -rw-r--r-- 2 boinc boinc 357078477 Apr 12 11:15 EVNT.43634896._000621.pool.root.1
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc         0 Apr 12 11:15 boinc_lockfile
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc      2599 Apr 12 11:15 pandaJob.out
[2025-04-12 15:04:09] -rw------- 1 boinc boinc       424 Apr 12 11:15 setup.sh.local
[2025-04-12 15:04:09] -rw------- 1 boinc boinc    986068 Apr 12 11:15 agis_schedconf.cvmfs.json
[2025-04-12 15:04:09] drwx------ 4 boinc boinc      4096 Apr 12 11:15 pilot3
[2025-04-12 15:04:09] -rw------- 1 boinc boinc 324617210 Apr 12 15:00 HITS.43634898._016891.pool.root.1
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc       532 Apr 12 15:00 boinc_task_state.xml
[2025-04-12 15:04:09] -rw------- 1 boinc boinc      1025 Apr 12 15:02 memory_monitor_summary.json
[2025-04-12 15:04:09] -rw------- 1 boinc boinc   1603529 Apr 12 15:02 agis_ddmendpoints.agis.ALL.json
[2025-04-12 15:04:09] -rw------- 1 boinc boinc    446079 Apr 12 15:02 log.43634898._016891.job.log.tgz.1
[2025-04-12 15:04:09] -rw------- 1 boinc boinc        95 Apr 12 15:03 pilot_heartbeat.json
[2025-04-12 15:04:09] -rw------- 1 boinc boinc      7652 Apr 12 15:03 heartbeat.json
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc        28 Apr 12 15:04 wrapper_checkpoint.txt
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc      8192 Apr 12 15:04 boinc_mmap_file
[2025-04-12 15:04:09] -rw------- 1 boinc boinc      4773 Apr 12 15:04 pilotlog.txt
[2025-04-12 15:04:09] -rw------- 1 boinc boinc   1194384 Apr 12 15:04 log.43634898._016891.job.log.1
[2025-04-12 15:04:09] -rw------- 1 boinc boinc       357 Apr 12 15:04 output.list
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc       620 Apr 12 15:04 runtime_log
[2025-04-12 15:04:09] -rw------- 1 boinc boinc   1658880 Apr 12 15:04 result.tar.gz
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc     11428 Apr 12 15:04 runtime_log.err
[2025-04-12 15:04:09] -rw------- 1 boinc boinc       655 Apr 12 15:04 Gs5KDmaCfK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmeFtKDmR3YsGn.diag
[2025-04-12 15:04:09] -rw-rw-r-- 1 boinc boinc     20725 Apr 12 15:04 stderr.txt
[2025-04-12 15:04:09] HITS file was successfully produced:
[2025-04-12 15:04:09] -rw------- 1 boinc boinc 324617210 Apr 12 15:00 shared/HITS.pool.root.1
[2025-04-12 15:04:09]  *** Contents of shared directory: ***
[2025-04-12 15:04:09] total 667872
[2025-04-12 15:04:09] -rw-r--r-- 2 boinc boinc     17569 Apr 12 11:15 start_atlas.sh
[2025-04-12 15:04:09] -rw-r--r-- 2 boinc boinc    508883 Apr 12 11:15 input.tar.gz
[2025-04-12 15:04:09] -rw-r--r-- 2 boinc boinc 357078477 Apr 12 11:15 ATLAS.root_0
[2025-04-12 15:04:09] -rw------- 1 boinc boinc 324617210 Apr 12 15:00 HITS.pool.root.1
[2025-04-12 15:04:09] -rw------- 1 boinc boinc   1658880 Apr 12 15:04 result.tar.gz
15:04:10 (2655486): run_atlas exited; CPU time 79527.819794
15:04:10 (2655486): called boinc_finish(0)

</stderr_txt>
]]>

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