Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-13 12:07:50 (4624): Detected: vboxwrapper 26206
2025-04-13 12:07:50 (4624): Detected: BOINC client v8.0.2
2025-04-13 12:07:51 (4624): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-04-13 12:07:51 (4624): Successfully copied 'init_data.xml' to the shared directory.
2025-04-13 12:07:52 (4624): Create VM. (boinc_7a5ecd66174ffcf0, slot#0)
2025-04-13 12:07:52 (4624): Setting Memory Size for VM. (4200MB)
2025-04-13 12:07:53 (4624): Setting CPU Count for VM. (2)
2025-04-13 12:07:53 (4624): Setting Chipset Options for VM.
2025-04-13 12:07:53 (4624): Setting Graphics Controller Options for VM.
2025-04-13 12:07:54 (4624): Setting Boot Options for VM.
2025-04-13 12:07:54 (4624): Setting Network Configuration for NAT.
2025-04-13 12:07:54 (4624): Enabling VM Network Access.
2025-04-13 12:07:54 (4624): Disabling USB Support for VM.
2025-04-13 12:07:55 (4624): Disabling COM Port Support for VM.
2025-04-13 12:07:55 (4624): Disabling LPT Port Support for VM.
2025-04-13 12:07:55 (4624): Disabling Audio Support for VM.
2025-04-13 12:07:55 (4624): Disabling Clipboard Support for VM.
2025-04-13 12:07:56 (4624): Disabling Drag and Drop Support for VM.
2025-04-13 12:07:56 (4624): Adding storage controller(s) to VM.
2025-04-13 12:07:56 (4624): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-13 12:07:57 (4624): Adding VirtualBox Guest Additions to VM.
2025-04-13 12:07:57 (4624): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-13 12:07:58 (4624): forwarding host port 57659 to guest port 80
2025-04-13 12:07:58 (4624): Enabling remote desktop for VM.
2025-04-13 12:07:59 (4624): Enabling shared directory for VM.
2025-04-13 12:07:59 (4624): Starting VM using VBoxManage interface. (boinc_7a5ecd66174ffcf0, slot#0)
2025-04-13 12:08:04 (4624): Successfully started VM. (PID = '8484')
2025-04-13 12:08:04 (4624): Reporting VM Process ID to BOINC.
2025-04-13 12:08:04 (4624): Guest Log: BIOS: VirtualBox 6.1.36
2025-04-13 12:08:04 (4624): Guest Log: CPUID EDX: 0x178bfbff
2025-04-13 12:08:04 (4624): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-13 12:08:04 (4624): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-13 12:08:04 (4624): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-13 12:08:04 (4624): Detected: Web Application Enabled (http://localhost:57659)
2025-04-13 12:08:04 (4624): Detected: Remote Desktop Enabled (localhost:57660)
2025-04-13 12:08:04 (4624): Preference change detected
2025-04-13 12:08:04 (4624): Setting CPU throttle for VM. (100%)
2025-04-13 12:08:05 (4624): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-13 12:08:06 (4624): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-13 12:08:06 (4624): Guest Log: BIOS: Booting from Hard Disk...
2025-04-13 12:08:09 (4624): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-13 12:08:09 (4624): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-13 12:08:09 (4624): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-13 12:08:14 (4624): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-13 12:08:14 (4624): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-13 12:08:20 (4624): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-13 12:08:20 (4624): Guest Log: 00:00:00.000170 main     Log opened 2025-04-13T12:08:18.800077000Z
2025-04-13 12:08:20 (4624): Guest Log: 00:00:00.000312 main     OS Product: Linux
2025-04-13 12:08:20 (4624): Guest Log: 00:00:00.000368 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-13 12:08:20 (4624): Guest Log: 00:00:00.000410 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-13 12:08:20 (4624): Guest Log: 00:00:00.000453 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-13 12:08:20 (4624): Guest Log: 00:00:00.000454 main     Process ID: 1266
2025-04-13 12:08:20 (4624): Guest Log: 00:00:00.000455 main     Package type: LINUX_64BITS_GENERIC
2025-04-13 12:08:20 (4624): Guest Log: 00:00:00.002000 main     5.2.32 r132073 started. Verbose level = 0
2025-04-13 12:08:21 (4624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-13 12:08:21 (4624): Guest Log: [INFO] Mounting shared directory
2025-04-13 12:08:21 (4624): Guest Log: [INFO] Checking for init_data.xml
2025-04-13 12:08:23 (4624): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-13 12:08:23 (4624): Guest Log: [INFO] Detected branch: prod
2025-04-13 12:08:23 (4624): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-13 12:08:23 (4624): Guest Log: Copying input files
2025-04-13 12:08:25 (4624): Guest Log: Copied input files into RunAtlas.
2025-04-13 12:08:25 (4624): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-04-13 12:08:30 (4624): Guest Log: 00:00:10.003850 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 908 900 000ns (GuestNow=1 744 538 910 894 401 000 ns GuestLast=1 744 546 098 803 301 000 ns fSetTimeLastLoop=true )
2025-04-13 12:08:33 (4624): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-13 12:08:33 (4624): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-13 12:08:33 (4624): Guest Log: 2.6.3.0 1538 0 29600 144807 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-04-13 12:08:34 (4624): Guest Log: copied the webapp to /var/www
2025-04-13 12:08:34 (4624): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-13 12:08:34 (4624): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-13 12:08:34 (4624): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-13 12:08:34 (4624): Guest Log:  *** Starting ATLAS job. (PandaID=6600394338 taskID=44075164) ***
2025-04-13 13:48:06 (4624): Status Report: Elapsed Time: '6000.000000'
2025-04-13 13:48:06 (4624): Status Report: CPU Time: '11112.840436'
2025-04-13 15:28:07 (4624): Status Report: Elapsed Time: '12000.000000'
2025-04-13 15:28:07 (4624): Status Report: CPU Time: '23103.264497'
2025-04-13 17:08:08 (4624): Status Report: Elapsed Time: '18000.000000'
2025-04-13 17:08:08 (4624): Status Report: CPU Time: '35093.095754'
2025-04-13 18:23:04 (4624): Guest Log:  *** Job finished ***
2025-04-13 18:23:04 (4624): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:22:54,310 | INFO     | [payload] failed_post thread has finished
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:22:55,315 | INFO     | [data] copytool_out thread has finished
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:22:56,193 | INFO     | [data] queue_monitor thread has finished
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:22:58,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140512711931712)>', '<ExcThread(monitor, started 140512103216896)>']
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:22:58,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:22:58,195 | INFO     | [monitor] control thread has ended
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,110 | INFO     | all workflow threads have been joined
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,111 | INFO     | end of generic workflow (traces error code: 0)
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,111 | INFO     | traces error code: 0
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,194 [wrapper] ==== pilot stdout END ====
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,199 [wrapper] ==== wrapper stdout RESUME ====
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,204 [wrapper] pilotpid: 5823
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,209 [wrapper] Pilot exit status: 0
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,280 [wrapper] pandaids: 6600394338
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,314 [wrapper] cleanup supervisor_pilot 26629 5824
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,319 [wrapper] Test setup, not cleaning
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,324 [wrapper] apfmon messages muted
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,330 [wrapper] ==== wrapper stdout END ====
2025-04-13 18:23:04 (4624): Guest Log: 2025-04-13 16:23:03,335 [wrapper] ==== wrapper stderr END ====
2025-04-13 18:23:04 (4624): Guest Log:  *** Error codes and diagnostics ***
2025-04-13 18:23:04 (4624): Guest Log:     "exeErrorCode": 0,
2025-04-13 18:23:04 (4624): Guest Log:     "exeErrorDiag": "",
2025-04-13 18:23:04 (4624): Guest Log:     "pilotErrorCode": 0,
2025-04-13 18:23:04 (4624): Guest Log:     "pilotErrorDiag": "",
2025-04-13 18:23:04 (4624): Guest Log:  *** Listing of results directory ***
2025-04-13 18:23:04 (4624): Guest Log: total 195580
2025-04-13 18:23:04 (4624): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 12 05:20 pilot3.tar.gz
2025-04-13 18:23:04 (4624): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 12 05:32 queuedata.json
2025-04-13 18:23:04 (4624): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 12 05:33 runpilot2-wrapper.sh
2025-04-13 18:23:04 (4624): Guest Log: -rwxr-xr-x. 1 atlas atlas      8322 Apr 13 10:08 init_data.xml
2025-04-13 18:23:04 (4624): Guest Log: -rwxr-xr-x. 1 atlas atlas    508882 Apr 13 10:08 input.tar.gz
2025-04-13 18:23:04 (4624): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 13 10:08 start_atlas.sh
2025-04-13 18:23:04 (4624): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 10:08 EVNT.44075162._001550.pool.root.1 -> /data/./ATLAS.root_0
2025-04-13 18:23:04 (4624): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 13 10:08 pandaJob.out
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas       461 Apr 13 10:08 setup.sh.local
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas    985788 Apr 13 10:09 agis_schedconf.cvmfs.json
2025-04-13 18:23:04 (4624): Guest Log: drwx------. 4 atlas atlas      4096 Apr 13 10:09 pilot3
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas 191896119 Apr 13 16:22 HITS.44075164._040033.pool.root.1
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas      1025 Apr 13 16:22 memory_monitor_summary.json
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 13 16:22 agis_ddmendpoints.agis.ALL.json
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas    355915 Apr 13 16:22 log.44075164._040033.job.log.tgz.1
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 16:22 pilot_heartbeat.json
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas      7710 Apr 13 16:22 heartbeat.json
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 13 16:23 pilotlog.txt
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas   1945179 Apr 13 16:23 log.44075164._040033.job.log.1
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 16:23 output.list
2025-04-13 18:23:04 (4624): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 13 16:23 runtime_log
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas   2324480 Apr 13 16:23 result.tar.gz
2025-04-13 18:23:04 (4624): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Apr 13 16:23 runtime_log.err
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas       663 Apr 13 16:23 pRoMDmRfiN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPhQLDmOVSlin.diag
2025-04-13 18:23:04 (4624): Guest Log: Looking for outputfile HITS.44075164._040033.pool.root.1
2025-04-13 18:23:04 (4624): Guest Log: HITS file was successfully produced
2025-04-13 18:23:04 (4624): Guest Log: -rw-------. 1 atlas atlas 191896119 Apr 13 16:22 /home/atlas/RunAtlas/HITS.44075164._040033.pool.root.1
2025-04-13 18:23:05 (4624): Guest Log: Successfully finished the ATLAS job!
2025-04-13 18:23:05 (4624): Guest Log: Copying the results back to the shared directory!
2025-04-13 18:23:05 (4624): Guest Log:  *** Contents of shared directory: ***
2025-04-13 18:23:05 (4624): Guest Log: total 404016
2025-04-13 18:23:05 (4624): Guest Log: -rwxrwxrwx. 1 root root 218939684 Apr 13 10:07 ATLAS.root_0
2025-04-13 18:23:05 (4624): Guest Log: -rwxrwxrwx. 1 root root 191896119 Apr 13 16:23 HITS.pool.root.1
2025-04-13 18:23:05 (4624): Guest Log: -rwxrwxrwx. 1 root root      8322 Apr 13 10:07 init_data.xml
2025-04-13 18:23:05 (4624): Guest Log: -rwxrwxrwx. 1 root root    508882 Apr 12 08:22 input.tar.gz
2025-04-13 18:23:05 (4624): Guest Log: -rwxrwxrwx. 1 root root   2324480 Apr 13 16:23 result.tar.gz
2025-04-13 18:23:05 (4624): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 12 08:22 start_atlas.sh
2025-04-13 18:23:05 (4624): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-13 18:23:05 (4624): VM Completion File Detected.
2025-04-13 18:23:05 (4624): Powering off VM.
2025-04-13 18:23:06 (4624): Successfully stopped VM.
2025-04-13 18:23:06 (4624): Deregistering VM. (boinc_7a5ecd66174ffcf0, slot#0)
2025-04-13 18:23:06 (4624): Removing network bandwidth throttle group from VM.
2025-04-13 18:23:06 (4624): Removing VM from VirtualBox.
18:23:11 (4624): called boinc_finish(0)

</stderr_txt>
]]>

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