Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-13 05:50:53 (1968): Detected: vboxwrapper 26206
2025-04-13 05:50:53 (1968): Detected: BOINC client v8.0.2
2025-04-13 05:50:54 (1968): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-04-13 05:50:54 (1968): Successfully copied 'init_data.xml' to the shared directory.
2025-04-13 05:50:54 (1968): Create VM. (boinc_1d374de4fe3f89a1, slot#0)
2025-04-13 05:50:55 (1968): Setting Memory Size for VM. (4200MB)
2025-04-13 05:50:55 (1968): Setting CPU Count for VM. (2)
2025-04-13 05:50:55 (1968): Setting Chipset Options for VM.
2025-04-13 05:50:56 (1968): Setting Graphics Controller Options for VM.
2025-04-13 05:50:56 (1968): Setting Boot Options for VM.
2025-04-13 05:50:56 (1968): Setting Network Configuration for NAT.
2025-04-13 05:50:57 (1968): Enabling VM Network Access.
2025-04-13 05:50:57 (1968): Disabling USB Support for VM.
2025-04-13 05:50:57 (1968): Disabling COM Port Support for VM.
2025-04-13 05:50:57 (1968): Disabling LPT Port Support for VM.
2025-04-13 05:50:58 (1968): Disabling Audio Support for VM.
2025-04-13 05:50:58 (1968): Disabling Clipboard Support for VM.
2025-04-13 05:50:58 (1968): Disabling Drag and Drop Support for VM.
2025-04-13 05:50:58 (1968): Adding storage controller(s) to VM.
2025-04-13 05:50:59 (1968): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-13 05:51:00 (1968): Adding VirtualBox Guest Additions to VM.
2025-04-13 05:51:00 (1968): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-13 05:51:00 (1968): forwarding host port 56138 to guest port 80
2025-04-13 05:51:01 (1968): Enabling remote desktop for VM.
2025-04-13 05:51:01 (1968): Enabling shared directory for VM.
2025-04-13 05:51:02 (1968): Starting VM using VBoxManage interface. (boinc_1d374de4fe3f89a1, slot#0)
2025-04-13 05:51:07 (1968): Successfully started VM. (PID = '2004')
2025-04-13 05:51:07 (1968): Reporting VM Process ID to BOINC.
2025-04-13 05:51:07 (1968): Guest Log: BIOS: VirtualBox 6.1.36
2025-04-13 05:51:07 (1968): Guest Log: CPUID EDX: 0x178bfbff
2025-04-13 05:51:07 (1968): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-13 05:51:07 (1968): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-13 05:51:07 (1968): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-13 05:51:07 (1968): Detected: Web Application Enabled (http://localhost:56138)
2025-04-13 05:51:07 (1968): Detected: Remote Desktop Enabled (localhost:56139)
2025-04-13 05:51:07 (1968): Preference change detected
2025-04-13 05:51:07 (1968): Setting CPU throttle for VM. (100%)
2025-04-13 05:51:07 (1968): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-13 05:51:09 (1968): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-13 05:51:09 (1968): Guest Log: BIOS: Booting from Hard Disk...
2025-04-13 05:51:12 (1968): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-13 05:51:12 (1968): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-13 05:51:12 (1968): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-13 05:51:18 (1968): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-13 05:51:18 (1968): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-13 05:51:25 (1968): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-13 05:51:25 (1968): Guest Log: 00:00:00.000178 main     Log opened 2025-04-13T05:51:23.249121000Z
2025-04-13 05:51:25 (1968): Guest Log: 00:00:00.000318 main     OS Product: Linux
2025-04-13 05:51:25 (1968): Guest Log: 00:00:00.000367 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-13 05:51:25 (1968): Guest Log: 00:00:00.000411 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-13 05:51:25 (1968): Guest Log: 00:00:00.000454 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-13 05:51:25 (1968): Guest Log: 00:00:00.000455 main     Process ID: 1260
2025-04-13 05:51:25 (1968): Guest Log: 00:00:00.000456 main     Package type: LINUX_64BITS_GENERIC
2025-04-13 05:51:25 (1968): Guest Log: 00:00:00.001869 main     5.2.32 r132073 started. Verbose level = 0
2025-04-13 05:51:25 (1968): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-13 05:51:25 (1968): Guest Log: [INFO] Mounting shared directory
2025-04-13 05:51:25 (1968): Guest Log: [INFO] Checking for init_data.xml
2025-04-13 05:51:28 (1968): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-13 05:51:28 (1968): Guest Log: [INFO] Detected branch: prod
2025-04-13 05:51:28 (1968): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-13 05:51:28 (1968): Guest Log: Copying input files
2025-04-13 05:51:29 (1968): Guest Log: Copied input files into RunAtlas.
2025-04-13 05:51:29 (1968): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-04-13 05:51:35 (1968): Guest Log: 00:00:10.017096 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 385 819 000ns (GuestNow=1 744 516 294 868 588 000 ns GuestLast=1 744 523 483 254 407 000 ns fSetTimeLastLoop=true )
2025-04-13 05:51:38 (1968): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-13 05:51:38 (1968): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-13 05:51:38 (1968): Guest Log: 2.6.3.0 1531 0 31776 144798 4 1 3119946 4096000 0 65024 0 0 n/a 1170 1930 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-04-13 05:51:39 (1968): Guest Log: copied the webapp to /var/www
2025-04-13 05:51:39 (1968): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-13 05:51:39 (1968): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-13 05:51:39 (1968): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-13 05:51:39 (1968): Guest Log:  *** Starting ATLAS job. (PandaID=6600381456 taskID=44075164) ***
2025-04-13 07:31:08 (1968): Status Report: Elapsed Time: '6000.000000'
2025-04-13 07:31:08 (1968): Status Report: CPU Time: '11116.693660'
2025-04-13 09:11:09 (1968): Status Report: Elapsed Time: '12000.000000'
2025-04-13 09:11:09 (1968): Status Report: CPU Time: '23106.899320'
2025-04-13 10:51:12 (1968): Status Report: Elapsed Time: '18000.000000'
2025-04-13 10:51:12 (1968): Status Report: CPU Time: '35068.619197'
2025-04-13 12:07:38 (1968): Guest Log:  *** Job finished ***
2025-04-13 12:07:38 (1968): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:21,170 | INFO     | [data] copytool_out thread has finished
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:21,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:25,321 | INFO     | [data] queue_monitor thread has finished
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:25,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836296046400)>', '<ExcThread(monitor, started 139835402610432)>']
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:26,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:26,428 | INFO     | [monitor] control thread has ended
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:30,810 | INFO     | all workflow threads have been joined
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:30,811 | INFO     | end of generic workflow (traces error code: 0)
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:30,811 | INFO     | traces error code: 0
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:30,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:30,896 [wrapper] ==== pilot stdout END ====
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:30,901 [wrapper] ==== wrapper stdout RESUME ====
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:30,905 [wrapper] pilotpid: 5818
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:30,909 [wrapper] Pilot exit status: 0
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:37,745 [wrapper] pandaids: 6600381456
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:37,774 [wrapper] cleanup supervisor_pilot 31288 5819
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:37,779 [wrapper] Test setup, not cleaning
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:37,787 [wrapper] apfmon messages muted
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:37,792 [wrapper] ==== wrapper stdout END ====
2025-04-13 12:07:38 (1968): Guest Log: 2025-04-13 10:07:37,797 [wrapper] ==== wrapper stderr END ====
2025-04-13 12:07:38 (1968): Guest Log:  *** Error codes and diagnostics ***
2025-04-13 12:07:38 (1968): Guest Log:     "exeErrorCode": 0,
2025-04-13 12:07:38 (1968): Guest Log:     "exeErrorDiag": "",
2025-04-13 12:07:38 (1968): Guest Log:     "pilotErrorCode": 0,
2025-04-13 12:07:38 (1968): Guest Log:     "pilotErrorDiag": "",
2025-04-13 12:07:38 (1968): Guest Log:  *** Listing of results directory ***
2025-04-13 12:07:38 (1968): Guest Log: total 198548
2025-04-13 12:07:38 (1968): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 11 21:44 pilot3.tar.gz
2025-04-13 12:07:38 (1968): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 11 21:49 queuedata.json
2025-04-13 12:07:38 (1968): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 11 21:50 runpilot2-wrapper.sh
2025-04-13 12:07:38 (1968): Guest Log: -rwxr-xr-x. 1 atlas atlas      8322 Apr 13 03:51 init_data.xml
2025-04-13 12:07:38 (1968): Guest Log: -rwxr-xr-x. 1 atlas atlas    508885 Apr 13 03:51 input.tar.gz
2025-04-13 12:07:38 (1968): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 13 03:51 start_atlas.sh
2025-04-13 12:07:38 (1968): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 03:51 EVNT.44075162._001277.pool.root.1 -> /data/./ATLAS.root_0
2025-04-13 12:07:38 (1968): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Apr 13 03:51 pandaJob.out
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas       461 Apr 13 03:51 setup.sh.local
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas    985792 Apr 13 03:52 agis_schedconf.cvmfs.json
2025-04-13 12:07:38 (1968): Guest Log: drwx------. 4 atlas atlas      4096 Apr 13 03:52 pilot3
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas 194822642 Apr 13 10:06 HITS.44075164._033199.pool.root.1
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas        95 Apr 13 10:06 pilot_heartbeat.json
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas      1025 Apr 13 10:07 memory_monitor_summary.json
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 13 10:07 agis_ddmendpoints.agis.ALL.json
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas    381422 Apr 13 10:07 log.44075164._033199.job.log.tgz.1
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas      7713 Apr 13 10:07 heartbeat.json
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas      4599 Apr 13 10:07 pilotlog.txt
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas   1978179 Apr 13 10:07 log.44075164._033199.job.log.1
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas       357 Apr 13 10:07 output.list
2025-04-13 12:07:38 (1968): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 13 10:07 runtime_log
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas   2375680 Apr 13 10:07 result.tar.gz
2025-04-13 12:07:38 (1968): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Apr 13 10:07 runtime_log.err
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas       663 Apr 13 10:07 IY0NDmORbN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmoSPLDmta7B4m.diag
2025-04-13 12:07:38 (1968): Guest Log: Looking for outputfile HITS.44075164._033199.pool.root.1
2025-04-13 12:07:38 (1968): Guest Log: HITS file was successfully produced
2025-04-13 12:07:38 (1968): Guest Log: -rw-------. 1 atlas atlas 194822642 Apr 13 10:06 /home/atlas/RunAtlas/HITS.44075164._033199.pool.root.1
2025-04-13 12:07:39 (1968): Guest Log: Successfully finished the ATLAS job!
2025-04-13 12:07:39 (1968): Guest Log: Copying the results back to the shared directory!
2025-04-13 12:07:39 (1968): Guest Log:  *** Contents of shared directory: ***
2025-04-13 12:07:39 (1968): Guest Log: total 409472
2025-04-13 12:07:39 (1968): Guest Log: -rwxrwxrwx. 1 root root 221550451 Apr 13 03:50 ATLAS.root_0
2025-04-13 12:07:39 (1968): Guest Log: -rwxrwxrwx. 1 root root 194822642 Apr 13 10:07 HITS.pool.root.1
2025-04-13 12:07:39 (1968): Guest Log: -rwxrwxrwx. 1 root root      8322 Apr 13 03:50 init_data.xml
2025-04-13 12:07:39 (1968): Guest Log: -rwxrwxrwx. 1 root root    508885 Apr 12 07:37 input.tar.gz
2025-04-13 12:07:39 (1968): Guest Log: -rwxrwxrwx. 1 root root   2375680 Apr 13 10:07 result.tar.gz
2025-04-13 12:07:39 (1968): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 12 07:37 start_atlas.sh
2025-04-13 12:07:39 (1968): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-13 12:07:40 (1968): VM Completion File Detected.
2025-04-13 12:07:40 (1968): Powering off VM.
2025-04-13 12:07:41 (1968): Successfully stopped VM.
2025-04-13 12:07:41 (1968): Deregistering VM. (boinc_1d374de4fe3f89a1, slot#0)
2025-04-13 12:07:41 (1968): Removing network bandwidth throttle group from VM.
2025-04-13 12:07:41 (1968): Removing VM from VirtualBox.
12:07:47 (1968): called boinc_finish(0)

</stderr_txt>
]]>

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