Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:00:19 (17857): wrapper (7.7.26015): starting
03:00:19 (17857): wrapper: running run_atlas (--nthreads 10)
[2025-04-12 03:00:19] Arguments: --nthreads 10
[2025-04-12 03:00:19] Threads: 10
[2025-04-12 03:00:19] Checking for CVMFS
[2025-04-12 03:00:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 03:00:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 03:00:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 03:00:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 03:00:22] 2.11.2.0 31676 31941 249248 144776 0 908 9258686 18432001 18247 130560 0 137601475 98.971 328433634 36071 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 03:00:22] CVMFS is ok
[2025-04-12 03:00:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 03:00:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 03:00:22] Further information can be found at the LHC@home message board.
[2025-04-12 03:00:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 03:00:22] Checking for apptainer binary...
[2025-04-12 03:00:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 03:00:22] Running /usr/bin/apptainer --version
[2025-04-12 03:00:23] apptainer version 1.3.2-1.el7
[2025-04-12 03:00:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 03:01:02] c-210-5.aglt2.org
[2025-04-12 03:01:02] apptainer works
[2025-04-12 03:01:02] Set ATHENA_PROC_NUMBER=10
[2025-04-12 03:01:02] Set ATHENA_CORE_NUMBER=10
[2025-04-12 03:01:03] Starting ATLAS job with PandaID=6600391450
[2025-04-12 03:01:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:09:49 (37874): wrapper (7.7.26015): starting
13:09:49 (37874): wrapper: running run_atlas (--nthreads 10)
[2025-04-12 13:09:50] Arguments: --nthreads 10
[2025-04-12 13:09:50] Threads: 10
[2025-04-12 13:09:50] This job has been restarted, cleaning up previous attempt
[2025-04-12 13:09:50] Checking for CVMFS
[2025-04-12 13:09:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 13:09:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 13:09:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 13:09:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 13:09:53] 2.11.2.0 31676 32550 250184 144776 3 922 13220490 18432001 16021 130560 0 138941494 98.966 331282019 36054 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-12 13:09:53] CVMFS is ok
[2025-04-12 13:09:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 13:09:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 13:09:53] Further information can be found at the LHC@home message board.
[2025-04-12 13:09:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 13:09:54] Checking for apptainer binary...
[2025-04-12 13:09:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 13:09:54] Running /usr/bin/apptainer --version
[2025-04-12 13:09:54] apptainer version 1.3.2-1.el7
[2025-04-12 13:09:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 13:10:17] c-210-5.aglt2.org
[2025-04-12 13:10:17] apptainer works
[2025-04-12 13:10:17] Set ATHENA_PROC_NUMBER=10
[2025-04-12 13:10:17] Set ATHENA_CORE_NUMBER=10
[2025-04-12 13:10:17] Starting ATLAS job with PandaID=6600391450
[2025-04-12 13:10:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 11:29:28]  *** The last 200 lines of the pilot log: ***
[2025-04-13 11:29:28] 2025-04-13 15:29:07,052 | INFO     | intersect: -6041123789.173854
[2025-04-13 11:29:28] 2025-04-13 15:29:07,074 | INFO     | chi2: 11.040130526723695
[2025-04-13 11:29:28] 2025-04-13 15:29:07,074 | INFO     | current chi2=11.040130526723695 (change=12.314815073639727 %)
[2025-04-13 11:29:28] 2025-04-13 15:29:07,074 | INFO     | right removable region: 1302
[2025-04-13 11:29:28] 2025-04-13 15:29:07,076 | INFO     | sum of square deviations: 685984227203.9817
[2025-04-13 11:29:28] 2025-04-13 15:29:07,450 | INFO     | sum of deviations: 1743963180932.1917
[2025-04-13 11:29:28] 2025-04-13 15:29:07,450 | INFO     | mean x: 1744518317.3768227
[2025-04-13 11:29:28] 2025-04-13 15:29:07,451 | INFO     | mean y: 2536208.13200307
[2025-04-13 11:29:28] 2025-04-13 15:29:07,451 | INFO     | -- intersect: -4432515784.779619
[2025-04-13 11:29:28] 2025-04-13 15:29:07,451 | INFO     | intersect: -4432515784.779619
[2025-04-13 11:29:28] 2025-04-13 15:29:07,453 | INFO     | chi2: 8.205245107145355
[2025-04-13 11:29:28] 2025-04-13 15:29:07,453 | INFO     | current chi2=8.205245107145355 (change=34.83062244195513 %)
[2025-04-13 11:29:28] 2025-04-13 15:29:07,475 | INFO     | sum of square deviations: 678117011596.9664
[2025-04-13 11:29:28] 2025-04-13 15:29:07,630 | INFO     | monitor loop #3431: job 0:6600391450 is in state 'finished'
[2025-04-13 11:29:28] 2025-04-13 15:29:07,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-13 11:29:28] 2025-04-13 15:29:07,740 | INFO     | sum of deviations: 1384378423909.2336
[2025-04-13 11:29:28] 2025-04-13 15:29:07,740 | INFO     | mean x: 1744518469.8821263
[2025-04-13 11:29:28] 2025-04-13 15:29:07,740 | INFO     | mean y: 2543177.393682589
[2025-04-13 11:29:28] 2025-04-13 15:29:07,741 | INFO     | -- intersect: -3558897825.433343
[2025-04-13 11:29:28] 2025-04-13 15:29:07,741 | INFO     | intersect: -3558897825.433343
[2025-04-13 11:29:28] 2025-04-13 15:29:07,743 | INFO     | chi2: 5.6297956239590565
[2025-04-13 11:29:28] 2025-04-13 15:29:07,743 | INFO     | current chi2=5.6297956239590565 (change=31.387843380126768 %)
[2025-04-13 11:29:28] 2025-04-13 15:29:07,745 | INFO     | sum of square deviations: 670310169214.8773
[2025-04-13 11:29:28] 2025-04-13 15:29:07,829 | INFO     | sum of deviations: 1087305895082.2911
[2025-04-13 11:29:28] 2025-04-13 15:29:07,829 | INFO     | mean x: 1744518622.387471
[2025-04-13 11:29:28] 2025-04-13 15:29:07,829 | INFO     | mean y: 2548980.0672853827
[2025-04-13 11:29:28] 2025-04-13 15:29:07,829 | INFO     | -- intersect: -2827223667.45864
[2025-04-13 11:29:28] 2025-04-13 15:29:07,829 | INFO     | intersect: -2827223667.45864
[2025-04-13 11:29:28] 2025-04-13 15:29:07,831 | INFO     | chi2: 3.9160209575982403
[2025-04-13 11:29:28] 2025-04-13 15:29:07,832 | INFO     | current chi2=3.9160209575982403 (change=30.441152411775008 %)
[2025-04-13 11:29:28] 2025-04-13 15:29:07,833 | INFO     | sum of square deviations: 662563467495.2139
[2025-04-13 11:29:28] 2025-04-13 15:29:07,877 | INFO     | sum of deviations: 808623243007.4595
[2025-04-13 11:29:28] 2025-04-13 15:29:07,877 | INFO     | mean x: 1744518774.892857
[2025-04-13 11:29:28] 2025-04-13 15:29:07,877 | INFO     | mean y: 2554466.2352484474
[2025-04-13 11:29:28] 2025-04-13 15:29:07,877 | INFO     | -- intersect: -2126537309.0390232
[2025-04-13 11:29:28] 2025-04-13 15:29:07,877 | INFO     | intersect: -2126537309.0390232
[2025-04-13 11:29:28] 2025-04-13 15:29:07,879 | INFO     | chi2: 2.4217628202564696
[2025-04-13 11:29:28] 2025-04-13 15:29:07,879 | INFO     | current chi2=2.4217628202564696 (change=38.15756231953936 %)
[2025-04-13 11:29:28] 2025-04-13 15:29:07,881 | INFO     | sum of square deviations: 654876752201.2719
[2025-04-13 11:29:28] 2025-04-13 15:29:07,924 | INFO     | sum of deviations: 662248249108.9688
[2025-04-13 11:29:28] 2025-04-13 15:29:07,924 | INFO     | mean x: 1744518927.3975058
[2025-04-13 11:29:28] 2025-04-13 15:29:07,924 | INFO     | mean y: 2557369.4902572096
[2025-04-13 11:29:28] 2025-04-13 15:29:07,925 | INFO     | -- intersect: -1761598406.8799803
[2025-04-13 11:29:28] 2025-04-13 15:29:07,925 | INFO     | intersect: -1761598406.8799803
[2025-04-13 11:29:28] 2025-04-13 15:29:07,927 | INFO     | chi2: 2.0233886772232594
[2025-04-13 11:29:28] 2025-04-13 15:29:07,927 | INFO     | current chi2=2.0233886772232594 (change=16.44975881622551 %)
[2025-04-13 11:29:28] 2025-04-13 15:29:07,927 | INFO     | left removable region: 50
[2025-04-13 11:29:28] 2025-04-13 15:29:07,929 | INFO     | sum of square deviations: 608544382539.025
[2025-04-13 11:29:28] 2025-04-13 15:29:07,994 | INFO     | sum of deviations: 513309048984.62537
[2025-04-13 11:29:28] 2025-04-13 15:29:07,994 | INFO     | mean x: 1744519506.9153354
[2025-04-13 11:29:28] 2025-04-13 15:29:07,995 | INFO     | mean y: 2567358.524760383
[2025-04-13 11:29:28] 2025-04-13 15:29:07,995 | INFO     | -- intersect: -1468940184.2671785
[2025-04-13 11:29:28] 2025-04-13 15:29:07,995 | INFO     | intersect: -1468940184.2671785
[2025-04-13 11:29:28] 2025-04-13 15:29:07,997 | INFO     | chi2: 0.08010110231512643
[2025-04-13 11:29:28] 2025-04-13 15:29:07,997 | INFO     | -- intersect: -1468940184.2671785
[2025-04-13 11:29:28] 2025-04-13 15:29:07,997 | INFO     | current memory leak: 0.84 B/s (using 1252 data points, chi2=0.08)
[2025-04-13 11:29:28] 2025-04-13 15:29:07,999 | INFO     | ..............................
[2025-04-13 11:29:28] 2025-04-13 15:29:07,999 | INFO     | . Timing measurements:
[2025-04-13 11:29:28] 2025-04-13 15:29:07,999 | INFO     | . get job = 1 s
[2025-04-13 11:29:28] 2025-04-13 15:29:07,999 | INFO     | . initial setup = 12 s
[2025-04-13 11:29:28] 2025-04-13 15:29:07,999 | INFO     | . payload setup = 99 s
[2025-04-13 11:29:28] 2025-04-13 15:29:07,999 | INFO     | . stage-in = 0 s
[2025-04-13 11:29:28] 2025-04-13 15:29:07,999 | INFO     | . payload execution = 79872 s
[2025-04-13 11:29:28] 2025-04-13 15:29:08,000 | INFO     | . stage-out = 12 s
[2025-04-13 11:29:28] 2025-04-13 15:29:08,000 | INFO     | . log creation = 5 s
[2025-04-13 11:29:28] 2025-04-13 15:29:08,000 | INFO     | ..............................
[2025-04-13 11:29:28] 2025-04-13 15:29:08,141 | INFO     | 
[2025-04-13 11:29:28] 2025-04-13 15:29:08,141 | INFO     | job summary report
[2025-04-13 11:29:28] 2025-04-13 15:29:08,141 | INFO     | --------------------------------------------------
[2025-04-13 11:29:28] 2025-04-13 15:29:08,141 | INFO     | PanDA job id: 6600391450
[2025-04-13 11:29:28] 2025-04-13 15:29:08,141 | INFO     | task id: 44075164
[2025-04-13 11:29:28] 2025-04-13 15:29:08,141 | INFO     | errors: (none)
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | pilot state: finished 
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | transexitcode: 0
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | exeerrorcode: 0
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | exeerrordiag: 
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | exitcode: 0
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | exitmsg: OK
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | cpuconsumptiontime: 59121 s
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | nevents: 400
[2025-04-13 11:29:28] 2025-04-13 15:29:08,142 | INFO     | neventsw: 0
[2025-04-13 11:29:28] 2025-04-13 15:29:08,143 | INFO     | pid: 8857
[2025-04-13 11:29:28] 2025-04-13 15:29:08,143 | INFO     | pgrp: 8857
[2025-04-13 11:29:28] 2025-04-13 15:29:08,143 | INFO     | corecount: 10
[2025-04-13 11:29:28] 2025-04-13 15:29:08,143 | INFO     | event service: False
[2025-04-13 11:29:28] 2025-04-13 15:29:08,143 | INFO     | sizes: {0: 2417100, 1: 2417156, 2: 2417212, 3: 2417411, 14: 2417411, 25: 2417439, 36: 2417595, 47: 2417623, 59: 2417679, 63: 2417913, 70: 2417941, 79976: 2473143, 
[2025-04-13 11:29:28] 2025-04-13 15:29:08,143 | INFO     | --------------------------------------------------
[2025-04-13 11:29:28] 2025-04-13 15:29:08,143 | INFO     | 
[2025-04-13 11:29:28] 2025-04-13 15:29:08,143 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-13 11:29:28] 2025-04-13 15:29:08,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 11:29:28] 2025-04-13 15:29:08,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 11:29:28] 2025-04-13 15:29:08,480 | INFO     | job 6600391450 has completed (purged errors)
[2025-04-13 11:29:28] 2025-04-13 15:29:08,480 | INFO     | overall cleanup function is called
[2025-04-13 11:29:28] 2025-04-13 15:29:09,502 | INFO     | --- collectZombieJob: --- 10, [8857]
[2025-04-13 11:29:28] 2025-04-13 15:29:09,502 | INFO     | zombie collector waiting for pid 8857
[2025-04-13 11:29:28] 2025-04-13 15:29:09,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 11:29:28] 2025-04-13 15:29:09,502 | INFO     | collected zombie processes
[2025-04-13 11:29:28] 2025-04-13 15:29:09,502 | INFO     | will attempt to kill all subprocesses of pid=8857
[2025-04-13 11:29:28] 2025-04-13 15:29:10,744 | INFO     | process IDs to be killed: [8857] (in reverse order)
[2025-04-13 11:29:28] 2025-04-13 15:29:11,715 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 11:29:28] 2025-04-13 15:29:11,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 11:29:28] 2025-04-13 15:29:11,729 | INFO     | did not find any defunct processes belonging to 8857
[2025-04-13 11:29:28] 2025-04-13 15:29:11,742 | INFO     | did not find any defunct processes belonging to 8857
[2025-04-13 11:29:28] 2025-04-13 15:29:11,743 | INFO     | ready for new job
[2025-04-13 11:29:28] 2025-04-13 15:29:11,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 11:29:28] 2025-04-13 15:29:11,747 | INFO     | **************************************
[2025-04-13 11:29:28] 2025-04-13 15:29:11,747 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 11:29:28] 2025-04-13 15:29:11,747 | INFO     | **************************************
[2025-04-13 11:29:28] 2025-04-13 15:29:11,747 | INFO     | 
[2025-04-13 11:29:28] 2025-04-13 15:29:11,750 | INFO     | architecture information:
[2025-04-13 11:29:28] 2025-04-13 15:29:11,754 | INFO     | executing command: cat /etc/os-release
[2025-04-13 11:29:28] 2025-04-13 15:29:12,075 | INFO     | cat /etc/os-release:
[2025-04-13 11:29:28] NAME="CentOS Linux"
[2025-04-13 11:29:28] VERSION="7 (Core)"
[2025-04-13 11:29:28] ID="centos"
[2025-04-13 11:29:28] ID_LIKE="rhel fedora"
[2025-04-13 11:29:28] VERSION_ID="7"
[2025-04-13 11:29:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 11:29:28] ANSI_COLOR="0;31"
[2025-04-13 11:29:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 11:29:28] HOME_URL="https://www.centos.org/"
[2025-04-13 11:29:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 11:29:28] 
[2025-04-13 11:29:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 11:29:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 11:29:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 11:29:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 11:29:28] 
[2025-04-13 11:29:28] 2025-04-13 15:29:12,098 | INFO     | **************************************
[2025-04-13 11:29:28] 2025-04-13 15:29:12,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-13 11:29:28] 2025-04-13 15:29:12,727 | INFO     | sufficient remaining disk space (56928239616 B)
[2025-04-13 11:29:28] 2025-04-13 15:29:12,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 11:29:28] 2025-04-13 15:29:12,728 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 11:29:28] 2025-04-13 15:29:12,728 | INFO     | update_server=False
[2025-04-13 11:29:28] 2025-04-13 15:29:12,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 11:29:28] 2025-04-13 15:29:12,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 11:29:28] 2025-04-13 15:29:13,005 | INFO     | all payload control threads have been joined
[2025-04-13 11:29:28] 2025-04-13 15:29:13,150 | INFO     | all data control threads have been joined
[2025-04-13 11:29:28] 2025-04-13 15:29:13,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 11:29:28] 2025-04-13 15:29:13,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 11:29:28] 2025-04-13 15:29:13,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 11:29:28] 2025-04-13 15:29:13,711 | INFO     | aborting loop
[2025-04-13 11:29:28] 2025-04-13 15:29:13,734 | INFO     | [job] retrieve thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:13,985 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:13,996 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,008 | INFO     | [data] copytool_in thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,015 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,034 | INFO     | [payload] control thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,181 | INFO     | [data] control thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,185 | INFO     | [job] queue monitor thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,335 | INFO     | all job control threads have been joined
[2025-04-13 11:29:28] 2025-04-13 15:29:14,494 | INFO     | [job] validate thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,543 | INFO     | [payload] failed_post thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,757 | INFO     | [job] job monitor thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,761 | INFO     | [data] copytool_out thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:14,943 | INFO     | [payload] validate_post thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:15,316 | INFO     | PID=7574 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-13 11:29:28] 2025-04-13 15:29:15,316 | INFO     | .. there are 42 such processes running
[2025-04-13 11:29:28] 2025-04-13 15:29:15,317 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 11:29:28] 2025-04-13 15:29:15,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 11:29:28] 2025-04-13 15:29:15,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 11:29:28] 2025-04-13 15:29:15,341 | INFO     | [job] control thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:17,574 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 11:29:28] 2025-04-13 15:29:18,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255942530880)>', '<ExcThread(monitor, started 140255361488640)>']
[2025-04-13 11:29:28] 2025-04-13 15:29:19,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 11:29:28] 2025-04-13 15:29:19,339 | INFO     | [monitor] control thread has ended
[2025-04-13 11:29:28] 2025-04-13 15:29:23,593 | INFO     | all workflow threads have been joined
[2025-04-13 11:29:28] 2025-04-13 15:29:23,593 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 11:29:28] 2025-04-13 15:29:23,593 | INFO     | traces error code: 0
[2025-04-13 11:29:28] 2025-04-13 15:29:23,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 11:29:28] 2025-04-13 15:29:25,490 [wrapper] ==== pilot stdout END ====
[2025-04-13 11:29:28] 2025-04-13 15:29:25,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 11:29:28] 2025-04-13 15:29:25,536 [wrapper] pilotpid: 7574
[2025-04-13 11:29:28] 2025-04-13 15:29:25,573 [wrapper] Pilot exit status: 0
[2025-04-13 11:29:28] 2025-04-13 15:29:25,665 [wrapper] pandaids: 6600391450 6600391450
[2025-04-13 11:29:28] 2025-04-13 15:29:26,484 [wrapper] cleanup supervisor_pilot 28715 7575
[2025-04-13 11:29:28] 2025-04-13 15:29:26,549 [wrapper] Test setup, not cleaning
[2025-04-13 11:29:28] 2025-04-13 15:29:26,577 [wrapper] apfmon messages muted
[2025-04-13 11:29:28] 2025-04-13 15:29:26,622 [wrapper] ==== wrapper stdout END ====
[2025-04-13 11:29:28] 2025-04-13 15:29:26,666 [wrapper] ==== wrapper stderr END ====
[2025-04-13 11:29:28]  *** Error codes and diagnostics ***
[2025-04-13 11:29:28]     "exeErrorCode": 0,
[2025-04-13 11:29:28]     "exeErrorDiag": "",
[2025-04-13 11:29:28]     "pilotErrorCode": 0,
[2025-04-13 11:29:28]     "pilotErrorDiag": "",
[2025-04-13 11:29:28]  *** Listing of results directory ***
[2025-04-13 11:29:28] total 635348
[2025-04-13 11:29:28] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas    495897 Apr 11 23:51 pilot3.tar.gz
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 00:01 queuedata.json
[2025-04-13 11:29:28] -rwx------ 1 boincer umatlas     37140 Apr 12 00:02 runpilot2-wrapper.sh
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas       100 Apr 12 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 11:29:28] -rwxr-xr-x 1 boincer umatlas      7986 Apr 12 03:00 run_atlas
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas       105 Apr 12 03:00 job.xml
[2025-04-13 11:29:28] -rw-r--r-- 3 boincer umatlas 222481235 Apr 12 03:00 EVNT.44075162._001516.pool.root.1
[2025-04-13 11:29:28] -rw-r--r-- 3 boincer umatlas 222481235 Apr 12 03:00 ATLAS.root_0
[2025-04-13 11:29:28] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 03:00 start_atlas.sh
[2025-04-13 11:29:28] drwxrwx--x 2 boincer umatlas      4096 Apr 12 03:00 shared
[2025-04-13 11:29:28] -rw-r--r-- 2 boincer umatlas    508882 Apr 12 03:00 input.tar.gz
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas         0 Apr 12 03:00 boinc_lockfile
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas      2550 Apr 12 13:10 pandaJob.out
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas       467 Apr 12 13:10 setup.sh.local
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas    986068 Apr 12 13:12 agis_schedconf.cvmfs.json
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas      6230 Apr 13 11:18 init_data.xml
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas 189899909 Apr 13 11:24 HITS.44075164._039195.pool.root.1
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas       532 Apr 13 11:25 boinc_task_state.xml
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas      1059 Apr 13 11:27 memory_monitor_summary.json
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas   1603529 Apr 13 11:27 agis_ddmendpoints.agis.ALL.json
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas    902773 Apr 13 11:27 log.44075164._039195.job.log.tgz.1
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas      7759 Apr 13 11:29 heartbeat.json
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas        96 Apr 13 11:29 pilot_heartbeat.json
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas      8192 Apr 13 11:29 boinc_mmap_file
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas        29 Apr 13 11:29 wrapper_checkpoint.txt
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas      4745 Apr 13 11:29 pilotlog.txt
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas   5038770 Apr 13 11:29 log.44075164._039195.job.log.1
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas       357 Apr 13 11:29 output.list
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas       620 Apr 13 11:29 runtime_log
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas   5959680 Apr 13 11:29 result.tar.gz
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas     11501 Apr 13 11:29 runtime_log.err
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas       788 Apr 13 11:29 nIqMDmtFhN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPXQLDmGtkjHm.diag
[2025-04-13 11:29:28] -rw-r--r-- 1 boincer umatlas     22919 Apr 13 11:29 stderr.txt
[2025-04-13 11:29:28] HITS file was successfully produced:
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas 189899909 Apr 13 11:24 shared/HITS.pool.root.1
[2025-04-13 11:29:28]  *** Contents of shared directory: ***
[2025-04-13 11:29:28] total 409068
[2025-04-13 11:29:28] -rw-r--r-- 3 boincer umatlas 222481235 Apr 12 03:00 ATLAS.root_0
[2025-04-13 11:29:28] -rw-r--r-- 2 boincer umatlas     17569 Apr 12 03:00 start_atlas.sh
[2025-04-13 11:29:28] -rw-r--r-- 2 boincer umatlas    508882 Apr 12 03:00 input.tar.gz
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas 189899909 Apr 13 11:24 HITS.pool.root.1
[2025-04-13 11:29:28] -rw------- 1 boincer umatlas   5959680 Apr 13 11:29 result.tar.gz
11:29:29 (37874): run_atlas exited; CPU time 62001.380374
11:29:29 (37874): called boinc_finish(0)

</stderr_txt>
]]>

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