Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-12 06:33:26 (6656): Detected: vboxwrapper 26206
2025-04-12 06:33:26 (6656): Detected: BOINC client v8.0.4
2025-04-12 06:33:26 (6656): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-12 06:33:27 (6656): Successfully copied 'init_data.xml' to the shared directory.
2025-04-12 06:33:27 (6656): Create VM. (boinc_5ead5501326a6363, slot#18)
2025-04-12 06:33:28 (6656): Setting Memory Size for VM. (4400MB)
2025-04-12 06:33:28 (6656): Setting CPU Count for VM. (4)
2025-04-12 06:33:28 (6656): Setting Chipset Options for VM.
2025-04-12 06:33:29 (6656): Setting Graphics Controller Options for VM.
2025-04-12 06:33:29 (6656): Setting Boot Options for VM.
2025-04-12 06:33:29 (6656): Setting Network Configuration for NAT.
2025-04-12 06:33:30 (6656): Enabling VM Network Access.
2025-04-12 06:33:30 (6656): Disabling USB Support for VM.
2025-04-12 06:33:30 (6656): Disabling COM Port Support for VM.
2025-04-12 06:33:30 (6656): Disabling LPT Port Support for VM.
2025-04-12 06:33:31 (6656): Disabling Audio Support for VM.
2025-04-12 06:33:31 (6656): Disabling Clipboard Support for VM.
2025-04-12 06:33:31 (6656): Disabling Drag and Drop Support for VM.
2025-04-12 06:33:32 (6656): Adding storage controller(s) to VM.
2025-04-12 06:33:32 (6656): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-12 06:33:35 (6656): Adding VirtualBox Guest Additions to VM.
2025-04-12 06:33:36 (6656): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-12 06:33:36 (6656): forwarding host port 54417 to guest port 80
2025-04-12 06:33:36 (6656): Enabling remote desktop for VM.
2025-04-12 06:33:36 (6656): Required extension pack not installed, remote desktop not enabled.
2025-04-12 06:33:36 (6656): Enabling shared directory for VM.
2025-04-12 06:33:37 (6656): Starting VM using VBoxManage interface. (boinc_5ead5501326a6363, slot#18)
2025-04-12 06:33:43 (6656): Successfully started VM. (PID = '20068')
2025-04-12 06:33:43 (6656): Reporting VM Process ID to BOINC.
2025-04-12 06:33:43 (6656): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-12 06:33:43 (6656): Guest Log: CPUID EDX: 0x178bfbff
2025-04-12 06:33:43 (6656): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-12 06:33:43 (6656): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-12 06:33:43 (6656): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-12 06:33:43 (6656): Detected: Web Application Enabled (http://localhost:54417)
2025-04-12 06:33:43 (6656): Preference change detected
2025-04-12 06:33:43 (6656): Setting CPU throttle for VM. (98%)
2025-04-12 06:33:43 (6656): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 06:33:45 (6656): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-12 06:33:45 (6656): Guest Log: BIOS: Booting from Hard Disk...
2025-04-12 06:33:48 (6656): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-12 06:33:48 (6656): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-12 06:33:48 (6656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-12 06:34:49 (6656): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-12 06:34:49 (6656): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-12 06:34:54 (6656): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-12 06:34:54 (6656): Guest Log: 00:00:00.000158 main     Log opened 2025-04-12T06:34:53.366830000Z
2025-04-12 06:34:54 (6656): Guest Log: 00:00:00.000268 main     OS Product: Linux
2025-04-12 06:34:54 (6656): Guest Log: 00:00:00.000295 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-12 06:34:54 (6656): Guest Log: 00:00:00.000315 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-12 06:34:54 (6656): Guest Log: 00:00:00.000333 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-12 06:34:54 (6656): Guest Log: 00:00:00.000334 main     Process ID: 1310
2025-04-12 06:34:54 (6656): Guest Log: 00:00:00.000334 main     Package type: LINUX_64BITS_GENERIC
2025-04-12 06:34:54 (6656): Guest Log: 00:00:00.000870 main     5.2.32 r132073 started. Verbose level = 0
2025-04-12 06:34:54 (6656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-12 06:34:54 (6656): Guest Log: [INFO] Mounting shared directory
2025-04-12 06:34:54 (6656): Guest Log: [INFO] Checking for init_data.xml
2025-04-12 06:34:57 (6656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-12 06:34:57 (6656): Guest Log: [INFO] Detected branch: prod
2025-04-12 06:34:57 (6656): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-12 06:34:57 (6656): Guest Log: Copying input files
2025-04-12 06:34:58 (6656): Guest Log: Copied input files into RunAtlas.
2025-04-12 06:34:58 (6656): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-12 06:34:58 (6656): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-12 06:34:58 (6656): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-12 06:34:58 (6656): Guest Log: Further information can be found at the LHC@home message board.
2025-04-12 06:35:04 (6656): Guest Log: 00:00:10.002828 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 248 649 560 000ns (GuestNow=1 744 432 444 719 437 000 ns GuestLast=1 744 439 693 368 997 000 ns fSetTimeLastLoop=true )
2025-04-12 06:35:05 (6656): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-12 06:35:06 (6656): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-12 06:35:06 (6656): Guest Log: 2.6.3.0 1587 0 32236 144776 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-12 06:35:06 (6656): Guest Log: copied the webapp to /var/www
2025-04-12 06:35:06 (6656): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-12 06:35:06 (6656): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-12 06:35:06 (6656): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-12 06:35:06 (6656): Guest Log:  *** Starting ATLAS job. (PandaID=6586394086 taskID=43634898) ***
2025-04-12 07:35:33 (6656): VM state change detected. (old = 'running', new = 'paused')
2025-04-12 07:38:38 (6656): VM state change detected. (old = 'paused', new = 'running')
2025-04-12 07:57:06 (6656): Preference change detected
2025-04-12 07:57:06 (6656): Setting CPU throttle for VM. (98%)
2025-04-12 07:57:06 (6656): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 08:05:08 (6656): Preference change detected
2025-04-12 08:05:08 (6656): Setting CPU throttle for VM. (98%)
2025-04-12 08:05:08 (6656): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 08:16:56 (6656): Status Report: Elapsed Time: '6000.000000'
2025-04-12 08:16:56 (6656): Status Report: CPU Time: '20480.781250'
2025-04-12 09:48:22 (6656): Preference change detected
2025-04-12 09:48:22 (6656): Setting CPU throttle for VM. (98%)
2025-04-12 09:48:22 (6656): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 09:56:58 (6656): Status Report: Elapsed Time: '12000.000000'
2025-04-12 09:56:58 (6656): Status Report: CPU Time: '44257.921875'
2025-04-12 10:14:28 (6656): Guest Log:  *** Job finished ***
2025-04-12 10:14:28 (6656): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:22,133 | INFO     | [payload] validate_pre thread has finished
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:22,192 | INFO     | [payload] validate_post thread has finished
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:24,145 | INFO     | [data] queue_monitor thread has finished
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:24,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067019724608)>', '<ExcThread(monitor, started 140065988667136)>']
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:25,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:25,770 | INFO     | [monitor] control thread has ended
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,745 | INFO     | all workflow threads have been joined
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,745 | INFO     | end of generic workflow (traces error code: 0)
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,745 | INFO     | traces error code: 0
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,818 [wrapper] ==== pilot stdout END ====
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,821 [wrapper] ==== wrapper stdout RESUME ====
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,824 [wrapper] pilotpid: 5909
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,827 [wrapper] Pilot exit status: 0
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,883 [wrapper] pandaids: 6586394086
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,901 [wrapper] cleanup supervisor_pilot 12296 5910
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,904 [wrapper] Test setup, not cleaning
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,907 [wrapper] apfmon messages muted
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,910 [wrapper] ==== wrapper stdout END ====
2025-04-12 10:14:29 (6656): Guest Log: 2025-04-12 08:10:29,913 [wrapper] ==== wrapper stderr END ====
2025-04-12 10:14:29 (6656): Guest Log:  *** Error codes and diagnostics ***
2025-04-12 10:14:29 (6656): Guest Log:     "exeErrorCode": 0,
2025-04-12 10:14:29 (6656): Guest Log:     "exeErrorDiag": "",
2025-04-12 10:14:29 (6656): Guest Log:     "pilotErrorCode": 0,
2025-04-12 10:14:29 (6656): Guest Log:     "pilotErrorDiag": "",
2025-04-12 10:14:29 (6656): Guest Log:  *** Listing of results directory ***
2025-04-12 10:14:29 (6656): Guest Log: total 314804
2025-04-12 10:14:29 (6656): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr  3 21:22 pilot3.tar.gz
2025-04-12 10:14:29 (6656): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  3 21:25 runpilot2-wrapper.sh
2025-04-12 10:14:29 (6656): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr  3 21:25 queuedata.json
2025-04-12 10:14:29 (6656): Guest Log: -rwxr-xr-x. 1 atlas atlas      9325 Apr 12 04:33 init_data.xml
2025-04-12 10:14:29 (6656): Guest Log: -rwxr-xr-x. 1 atlas atlas    508886 Apr 12 04:33 input.tar.gz
2025-04-12 10:14:29 (6656): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 12 04:33 start_atlas.sh
2025-04-12 10:14:29 (6656): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 12 04:33 EVNT.43634896._000635.pool.root.1 -> /data/./ATLAS.root_0
2025-04-12 10:14:29 (6656): Guest Log: -rw-r--r--. 1 atlas atlas      2599 Apr 12 04:34 pandaJob.out
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas       424 Apr 12 04:34 setup.sh.local
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas    986068 Apr 12 04:34 agis_schedconf.cvmfs.json
2025-04-12 10:14:29 (6656): Guest Log: drwx------. 4 atlas atlas      4096 Apr 12 04:34 pilot3
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas 315732381 Apr 12 08:09 HITS.43634898._017870.pool.root.1
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas      1027 Apr 12 08:10 memory_monitor_summary.json
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 12 08:10 agis_ddmendpoints.agis.ALL.json
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas    303463 Apr 12 08:10 log.43634898._017870.job.log.tgz.1
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas        95 Apr 12 08:10 pilot_heartbeat.json
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas      7674 Apr 12 08:10 heartbeat.json
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 12 08:10 pilotlog.txt
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas   1120183 Apr 12 08:10 log.43634898._017870.job.log.1
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas       357 Apr 12 08:10 output.list
2025-04-12 10:14:29 (6656): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 12 08:10 runtime_log
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas   1443840 Apr 12 08:10 result.tar.gz
2025-04-12 10:14:29 (6656): Guest Log: -rw-r--r--. 1 atlas atlas     10947 Apr 12 08:10 runtime_log.err
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas       662 Apr 12 08:10 qHmKDmOFhK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmV3HLDmEtFK9m.diag
2025-04-12 10:14:29 (6656): Guest Log: Looking for outputfile HITS.43634898._017870.pool.root.1
2025-04-12 10:14:29 (6656): Guest Log: HITS file was successfully produced
2025-04-12 10:14:29 (6656): Guest Log: -rw-------. 1 atlas atlas 315732381 Apr 12 08:09 /home/atlas/RunAtlas/HITS.43634898._017870.pool.root.1
2025-04-12 10:14:29 (6656): Guest Log: Successfully finished the ATLAS job!
2025-04-12 10:14:29 (6656): Guest Log: Copying the results back to the shared directory!
2025-04-12 10:14:29 (6656): Guest Log:  *** Contents of shared directory: ***
2025-04-12 10:14:29 (6656): Guest Log: total 661548
2025-04-12 10:14:29 (6656): Guest Log: -rwxrwxrwx. 1 root root 359696469 Apr 12 04:33 ATLAS.root_0
2025-04-12 10:14:29 (6656): Guest Log: -rwxrwxrwx. 1 root root 315732381 Apr 12  2025 HITS.pool.root.1
2025-04-12 10:14:29 (6656): Guest Log: -rwxrwxrwx. 1 root root      9325 Apr 12 04:33 init_data.xml
2025-04-12 10:14:29 (6656): Guest Log: -rwxrwxrwx. 1 root root    508886 Apr 12 04:09 input.tar.gz
2025-04-12 10:14:29 (6656): Guest Log: -rwxrwxrwx. 1 root root   1443840 Apr 12  2025 result.tar.gz
2025-04-12 10:14:29 (6656): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 12 04:09 start_atlas.sh
2025-04-12 10:14:29 (6656): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-12 10:14:30 (6656): VM Completion File Detected.
2025-04-12 10:14:30 (6656): Powering off VM.
2025-04-12 10:14:30 (6656): Successfully stopped VM.
2025-04-12 10:14:30 (6656): Deregistering VM. (boinc_5ead5501326a6363, slot#18)
2025-04-12 10:14:30 (6656): Removing network bandwidth throttle group from VM.
2025-04-12 10:14:30 (6656): Removing VM from VirtualBox.
10:14:35 (6656): called boinc_finish(0)

</stderr_txt>
]]>

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