Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-12 09:21:18 (2444): Detected: vboxwrapper 26206
2025-04-12 09:21:18 (2444): Detected: BOINC client v8.0.2
2025-04-12 09:21:20 (2444): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-12 09:21:20 (2444): Successfully copied 'init_data.xml' to the shared directory.
2025-04-12 09:21:20 (2444): Create VM. (boinc_ea7dc74c4e03f453, slot#1)
2025-04-12 09:21:21 (2444): Setting Memory Size for VM. (4600MB)
2025-04-12 09:21:21 (2444): Setting CPU Count for VM. (6)
2025-04-12 09:21:21 (2444): Setting Chipset Options for VM.
2025-04-12 09:21:22 (2444): Setting Graphics Controller Options for VM.
2025-04-12 09:21:22 (2444): Setting Boot Options for VM.
2025-04-12 09:21:22 (2444): Setting Network Configuration for NAT.
2025-04-12 09:21:23 (2444): Enabling VM Network Access.
2025-04-12 09:21:23 (2444): Disabling USB Support for VM.
2025-04-12 09:21:23 (2444): Disabling COM Port Support for VM.
2025-04-12 09:21:24 (2444): Disabling LPT Port Support for VM.
2025-04-12 09:21:24 (2444): Disabling Audio Support for VM.
2025-04-12 09:21:24 (2444): Disabling Clipboard Support for VM.
2025-04-12 09:21:24 (2444): Disabling Drag and Drop Support for VM.
2025-04-12 09:21:25 (2444): Adding storage controller(s) to VM.
2025-04-12 09:21:25 (2444): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-12 09:21:28 (2444): Adding VirtualBox Guest Additions to VM.
2025-04-12 09:21:28 (2444): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-12 09:21:28 (2444): forwarding host port 59989 to guest port 80
2025-04-12 09:21:29 (2444): Enabling remote desktop for VM.
2025-04-12 09:21:29 (2444): Required extension pack not installed, remote desktop not enabled.
2025-04-12 09:21:29 (2444): Enabling shared directory for VM.
2025-04-12 09:21:30 (2444): Starting VM using VBoxManage interface. (boinc_ea7dc74c4e03f453, slot#1)
2025-04-12 09:21:38 (2444): Successfully started VM. (PID = '9812')
2025-04-12 09:21:38 (2444): Reporting VM Process ID to BOINC.
2025-04-12 09:21:38 (2444): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-12 09:21:38 (2444): Guest Log: CPUID EDX: 0x178bfbff
2025-04-12 09:21:38 (2444): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-12 09:21:38 (2444): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-12 09:21:38 (2444): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-12 09:21:38 (2444): Detected: Web Application Enabled (http://localhost:59989)
2025-04-12 09:21:38 (2444): Preference change detected
2025-04-12 09:21:38 (2444): Setting CPU throttle for VM. (100%)
2025-04-12 09:21:38 (2444): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 09:21:40 (2444): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-12 09:21:40 (2444): Guest Log: BIOS: Booting from Hard Disk...
2025-04-12 09:21:43 (2444): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-12 09:21:43 (2444): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-12 09:21:43 (2444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-12 09:21:51 (2444): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-12 09:21:51 (2444): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-12 09:21:58 (2444): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-12 09:21:58 (2444): Guest Log: 00:00:00.000446 main     Log opened 2025-04-12T09:21:56.201012000Z
2025-04-12 09:21:58 (2444): Guest Log: 00:00:00.000590 main     OS Product: Linux
2025-04-12 09:21:58 (2444): Guest Log: 00:00:00.000641 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-12 09:21:58 (2444): Guest Log: 00:00:00.000684 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-12 09:21:58 (2444): Guest Log: 00:00:00.000730 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-12 09:21:58 (2444): Guest Log: 00:00:00.000731 main     Process ID: 1298
2025-04-12 09:21:58 (2444): Guest Log: 00:00:00.000732 main     Package type: LINUX_64BITS_GENERIC
2025-04-12 09:21:58 (2444): Guest Log: 00:00:00.002126 main     5.2.32 r132073 started. Verbose level = 0
2025-04-12 09:21:58 (2444): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-12 09:21:58 (2444): Guest Log: [INFO] Mounting shared directory
2025-04-12 09:21:58 (2444): Guest Log: [INFO] Checking for init_data.xml
2025-04-12 09:22:04 (2444): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-12 09:22:04 (2444): Guest Log: [INFO] Detected branch: prod
2025-04-12 09:22:04 (2444): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-12 09:22:04 (2444): Guest Log: Copying input files
2025-04-12 09:22:06 (2444): Guest Log: Copied input files into RunAtlas.
2025-04-12 09:22:06 (2444): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-12 09:22:06 (2444): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-12 09:22:06 (2444): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-12 09:22:06 (2444): Guest Log: Further information can be found at the LHC@home message board.
2025-04-12 09:22:08 (2444): Guest Log: 00:00:10.006281 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 567 732 000ns (GuestNow=1 744 442 527 637 009 000 ns GuestLast=1 744 449 716 204 741 000 ns fSetTimeLastLoop=true )
2025-04-12 09:22:15 (2444): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-12 09:22:16 (2444): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-12 09:22:16 (2444): Guest Log: 2.6.3.0 1593 0 30084 144776 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-12 09:22:20 (2444): Guest Log: copied the webapp to /var/www
2025-04-12 09:22:20 (2444): Guest Log: ATHENA_PROC_NUMBER=6
2025-04-12 09:22:20 (2444): Guest Log: ATHENA_CORE_NUMBER=6
2025-04-12 09:22:20 (2444): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-12 09:22:20 (2444): Guest Log:  *** Starting ATLAS job. (PandaID=6596325862 taskID=44075164) ***
2025-04-12 09:35:36 (2444): Guest Log:  *** Job finished ***
2025-04-12 09:35:36 (2444): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:26,877 | INFO     | [payload] failed_post thread has finished
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:26,922 | INFO     | [payload] control thread has finished
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:28,692 | INFO     | [data] queue_monitor thread has finished
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:30,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966841976640)>', '<ExcThread(monitor, started 139966264895232)>']
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:30,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:30,786 | INFO     | [monitor] control thread has ended
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,118 | INFO     | all workflow threads have been joined
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,118 | INFO     | end of generic workflow (traces error code: 0)
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,119 | INFO     | traces error code: 0
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,269 [wrapper] ==== pilot stdout END ====
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,279 [wrapper] ==== wrapper stdout RESUME ====
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,290 [wrapper] pilotpid: 5942
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,299 [wrapper] Pilot exit status: 0
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,639 [wrapper] pandaids: 6596325862
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,691 [wrapper] cleanup supervisor_pilot  5948 5943
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,701 [wrapper] Test setup, not cleaning
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,711 [wrapper] apfmon messages muted
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,721 [wrapper] ==== wrapper stdout END ====
2025-04-12 09:35:36 (2444): Guest Log: 2025-04-12 07:35:35,730 [wrapper] ==== wrapper stderr END ====
2025-04-12 09:35:36 (2444): Guest Log:  *** Error codes and diagnostics ***
2025-04-12 09:35:36 (2444): Guest Log:     "exeErrorCode": 65,
2025-04-12 09:35:36 (2444): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5710.27 KB/s",
2025-04-12 09:35:36 (2444): Guest Log:     "pilotErrorCode": 1305,
2025-04-12 09:35:36 (2444): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5710.27 KB/s",
2025-04-12 09:35:36 (2444): Guest Log:  *** Listing of results directory ***
2025-04-12 09:35:36 (2444): Guest Log: total 4152
2025-04-12 09:35:36 (2444): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 10 17:35 pilot3.tar.gz
2025-04-12 09:35:36 (2444): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 10 17:45 queuedata.json
2025-04-12 09:35:36 (2444): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 10 17:46 runpilot2-wrapper.sh
2025-04-12 09:35:36 (2444): Guest Log: -rwxr-xr-x. 1 atlas atlas    8842 Apr 12 07:22 init_data.xml
2025-04-12 09:35:36 (2444): Guest Log: -rwxr-xr-x. 1 atlas atlas  508882 Apr 12 07:22 input.tar.gz
2025-04-12 09:35:36 (2444): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 12 07:22 start_atlas.sh
2025-04-12 09:35:36 (2444): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 12 07:22 EVNT.44075162._001165.pool.root.1 -> /data/./ATLAS.root_0
2025-04-12 09:35:36 (2444): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Apr 12 07:22 pandaJob.out
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas     424 Apr 12 07:22 setup.sh.local
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas  986068 Apr 12 07:25 agis_schedconf.cvmfs.json
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas 1603529 Apr 12 07:25 agis_ddmendpoints.agis.ALL.json
2025-04-12 09:35:36 (2444): Guest Log: drwx------. 4 atlas atlas    4096 Apr 12 07:25 pilot3
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas   50825 Apr 12 07:33 log.44075164._029373.job.log.tgz.1
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas      95 Apr 12 07:35 pilot_heartbeat.json
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas    8262 Apr 12 07:35 heartbeat.json
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas    4536 Apr 12 07:35 pilotlog.txt
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas  188555 Apr 12 07:35 log.44075164._029373.job.log.1
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas     188 Apr 12 07:35 output.list
2025-04-12 09:35:36 (2444): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 12 07:35 runtime_log
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas  256000 Apr 12 07:35 result.tar.gz
2025-04-12 09:35:36 (2444): Guest Log: -rw-r--r--. 1 atlas atlas   10779 Apr 12 07:35 runtime_log.err
2025-04-12 09:35:36 (2444): Guest Log: -rw-------. 1 atlas atlas     641 Apr 12 07:35 NcGKDm59AN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjsOLDm6dGrJm.diag
2025-04-12 09:35:36 (2444): Guest Log: Looking for outputfile HITS.44075164._029373.pool.root.1
2025-04-12 09:35:36 (2444): Guest Log: No HITS file was produced
2025-04-12 09:35:36 (2444): Guest Log: Successfully finished the ATLAS job!
2025-04-12 09:35:36 (2444): Guest Log: Copying the results back to the shared directory!
2025-04-12 09:35:36 (2444): Guest Log:  *** Contents of shared directory: ***
2025-04-12 09:35:37 (2444): Guest Log: total 219040
2025-04-12 09:35:37 (2444): Guest Log: -rwxrwxrwx. 1 root root 223491075 Apr 12 07:21 ATLAS.root_0
2025-04-12 09:35:37 (2444): Guest Log: -rwxrwxrwx. 1 root root      8842 Apr 12 07:21 init_data.xml
2025-04-12 09:35:37 (2444): Guest Log: -rwxrwxrwx. 1 root root    508882 Apr 12 04:01 input.tar.gz
2025-04-12 09:35:37 (2444): Guest Log: -rwxrwxrwx. 1 root root    256000 Apr 12  2025 result.tar.gz
2025-04-12 09:35:37 (2444): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 12 04:01 start_atlas.sh
2025-04-12 09:35:37 (2444): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-12 09:35:37 (2444): VM Completion File Detected.
2025-04-12 09:35:37 (2444): Powering off VM.
2025-04-12 09:35:38 (2444): Successfully stopped VM.
2025-04-12 09:35:38 (2444): Deregistering VM. (boinc_ea7dc74c4e03f453, slot#1)
2025-04-12 09:35:39 (2444): Removing network bandwidth throttle group from VM.
2025-04-12 09:35:39 (2444): Removing VM from VirtualBox.
09:35:44 (2444): called boinc_finish(0)

</stderr_txt>
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