Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
10:03:35 (2226935): wrapper (7.7.26015): starting
10:03:35 (2226935): wrapper: running run_atlas (--nthreads 4)
[2025-04-13 10:03:35] Arguments: --nthreads 4
[2025-04-13 10:03:35] Threads: 4
[2025-04-13 10:03:35] Checking for CVMFS
[2025-04-13 10:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-13 10:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-13 10:03:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-13 10:03:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-13 10:03:36] 2.12.7.0 60005 5269 54404 144803 3 56 4277327 6144001 910 130560 0 5783402 99.995 858962 10042 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-04-13 10:03:36] CVMFS is ok
[2025-04-13 10:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-13 10:03:36] Checking for apptainer binary...
[2025-04-13 10:03:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-13 10:03:36] Running /usr/bin/apptainer --version
[2025-04-13 10:03:36] apptainer version 1.4.0
[2025-04-13 10:03:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-13 10:03:36] Asus
[2025-04-13 10:03:36] apptainer works
[2025-04-13 10:03:36] Set ATHENA_PROC_NUMBER=4
[2025-04-13 10:03:36] Set ATHENA_CORE_NUMBER=4
[2025-04-13 10:03:36] Starting ATLAS job with PandaID=6586324247
[2025-04-13 10:03:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-13 13:54:39]  *** The last 200 lines of the pilot log: ***
[2025-04-13 13:54:40] 2025-04-13 11:54:28,672 | INFO     | using path: /var/lib/boinc2/slots/1/PanDA_Pilot-6586324247/memory_monitor_summary.json (trf name=prmon)
[2025-04-13 13:54:40] 2025-04-13 11:54:28,672 | INFO     | extracted standard info from prmon json
[2025-04-13 13:54:40] 2025-04-13 11:54:28,672 | INFO     | extracted standard memory fields from prmon json
[2025-04-13 13:54:40] 2025-04-13 11:54:28,672 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-13 13:54:40] 2025-04-13 11:54:28,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-13 13:54:40] 2025-04-13 11:54:28,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-13 13:54:40] 2025-04-13 11:54:28,676 | INFO     | fitting pss+swap vs Time
[2025-04-13 13:54:40] 2025-04-13 11:54:28,676 | INFO     | sum of square deviations: 3627000098.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,677 | INFO     | sum of deviations: 23369121776.999996
[2025-04-13 13:54:40] 2025-04-13 11:54:28,677 | INFO     | mean x: 1744538335.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,677 | INFO     | mean y: 2380079.4669603524
[2025-04-13 13:54:40] 2025-04-13 11:54:28,677 | INFO     | -- intersect: -11237853638.127996
[2025-04-13 13:54:40] 2025-04-13 11:54:28,677 | INFO     | intersect: -11237853638.127996
[2025-04-13 13:54:40] 2025-04-13 11:54:28,678 | INFO     | chi2: 2.4233540201238353
[2025-04-13 13:54:40] 2025-04-13 11:54:28,678 | INFO     | sum of square deviations: 3392567795.5
[2025-04-13 13:54:40] 2025-04-13 11:54:28,679 | INFO     | sum of deviations: 36085565741.5
[2025-04-13 13:54:40] 2025-04-13 11:54:28,679 | INFO     | mean x: 1744538182.5
[2025-04-13 13:54:40] 2025-04-13 11:54:28,679 | INFO     | mean y: 2388195.6801801804
[2025-04-13 13:54:40] 2025-04-13 11:54:28,679 | INFO     | -- intersect: -18553658748.072247
[2025-04-13 13:54:40] 2025-04-13 11:54:28,679 | INFO     | intersect: -18553658748.072247
[2025-04-13 13:54:40] 2025-04-13 11:54:28,679 | INFO     | chi2: 1.7620924241884564
[2025-04-13 13:54:40] 2025-04-13 11:54:28,679 | INFO     | current chi2=1.7620924241884564 (change=27.287040624035107 %)
[2025-04-13 13:54:40] 2025-04-13 11:54:28,680 | INFO     | sum of square deviations: 3168461268.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,681 | INFO     | sum of deviations: 35276042519.00001
[2025-04-13 13:54:40] 2025-04-13 11:54:28,681 | INFO     | mean x: 1744538030.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,681 | INFO     | mean y: 2387645.33640553
[2025-04-13 13:54:40] 2025-04-13 11:54:28,681 | INFO     | -- intersect: -19420414944.62175
[2025-04-13 13:54:40] 2025-04-13 11:54:28,681 | INFO     | intersect: -19420414944.62175
[2025-04-13 13:54:40] 2025-04-13 11:54:28,681 | INFO     | chi2: 1.7630322645538326
[2025-04-13 13:54:40] 2025-04-13 11:54:28,681 | INFO     | current chi2=1.7630322645538326 (change=-0.05333661007078268 %)
[2025-04-13 13:54:40] 2025-04-13 11:54:28,681 | INFO     | right removable region: 216
[2025-04-13 13:54:40] 2025-04-13 11:54:28,682 | INFO     | sum of square deviations: 3392567795.5
[2025-04-13 13:54:40] 2025-04-13 11:54:28,683 | INFO     | sum of deviations: -17884383515.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,683 | INFO     | mean x: 1744538487.5
[2025-04-13 13:54:40] 2025-04-13 11:54:28,683 | INFO     | mean y: 2406753.4954954954
[2025-04-13 13:54:40] 2025-04-13 11:54:28,683 | INFO     | -- intersect: 9198979157.593834
[2025-04-13 13:54:40] 2025-04-13 11:54:28,683 | INFO     | intersect: 9198979157.593834
[2025-04-13 13:54:40] 2025-04-13 11:54:28,683 | INFO     | chi2: 0.7477993416626861
[2025-04-13 13:54:40] 2025-04-13 11:54:28,683 | INFO     | current chi2=0.7477993416626861 (change=69.14196871555427 %)
[2025-04-13 13:54:40] 2025-04-13 11:54:28,683 | INFO     | sum of square deviations: 3168461268.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,684 | INFO     | sum of deviations: -11035959814.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,685 | INFO     | mean x: 1744538640.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,685 | INFO     | mean y: 2402060.944700461
[2025-04-13 13:54:40] 2025-04-13 11:54:28,685 | INFO     | -- intersect: 6078745338.185675
[2025-04-13 13:54:40] 2025-04-13 11:54:28,685 | INFO     | intersect: 6078745338.185675
[2025-04-13 13:54:40] 2025-04-13 11:54:28,685 | INFO     | chi2: 0.7062681221531687
[2025-04-13 13:54:40] 2025-04-13 11:54:28,685 | INFO     | current chi2=0.7062681221531687 (change=5.553791932629322 %)
[2025-04-13 13:54:40] 2025-04-13 11:54:28,685 | INFO     | left removable region: 20
[2025-04-13 13:54:40] 2025-04-13 11:54:28,685 | INFO     | sum of square deviations: 2334722845.0
[2025-04-13 13:54:40] 2025-04-13 11:54:28,686 | INFO     | sum of deviations: 362727228.00000155
[2025-04-13 13:54:40] 2025-04-13 11:54:28,686 | INFO     | mean x: 1744538609.5
[2025-04-13 13:54:40] 2025-04-13 11:54:28,686 | INFO     | mean y: 2412323.5408163266
[2025-04-13 13:54:40] 2025-04-13 11:54:28,686 | INFO     | -- intersect: -268622696.87631255
[2025-04-13 13:54:40] 2025-04-13 11:54:28,686 | INFO     | intersect: -268622696.87631255
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | chi2: 0.003462731211920765
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | -- intersect: -268622696.87631255
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | current memory leak: 0.16 B/s (using 196 data points, chi2=0.00)
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | ..............................
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | . Timing measurements:
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | . get job = 0 s
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | . initial setup = 1 s
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | . payload setup = 3 s
[2025-04-13 13:54:40] 2025-04-13 11:54:28,687 | INFO     | . stage-in = 0 s
[2025-04-13 13:54:40] 2025-04-13 11:54:28,688 | INFO     | . payload execution = 13818 s
[2025-04-13 13:54:40] 2025-04-13 11:54:28,688 | INFO     | . stage-out = 0 s
[2025-04-13 13:54:40] 2025-04-13 11:54:28,688 | INFO     | . log creation = 0 s
[2025-04-13 13:54:40] 2025-04-13 11:54:28,688 | INFO     | ..............................
[2025-04-13 13:54:40] 2025-04-13 11:54:29,040 | INFO     | 
[2025-04-13 13:54:40] 2025-04-13 11:54:29,040 | INFO     | job summary report
[2025-04-13 13:54:40] 2025-04-13 11:54:29,040 | INFO     | --------------------------------------------------
[2025-04-13 13:54:40] 2025-04-13 11:54:29,040 | INFO     | PanDA job id: 6586324247
[2025-04-13 13:54:40] 2025-04-13 11:54:29,040 | INFO     | task id: 43634898
[2025-04-13 13:54:40] 2025-04-13 11:54:29,040 | INFO     | errors: (none)
[2025-04-13 13:54:40] 2025-04-13 11:54:29,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | pilot state: finished 
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | transexitcode: 0
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | exeerrorcode: 0
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | exeerrordiag: 
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | exitcode: 0
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | exitmsg: OK
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | cpuconsumptiontime: 53346 s
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | nevents: 400
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | neventsw: 0
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | pid: 2236975
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | pgrp: 2236975
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | corecount: 4
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | event service: False
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | sizes: {0: 2417400, 3: 2417606, 11: 2417634, 13825: 2448069, 13826: 2457012, 13829: 2457068, 13833: 2457366}
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | --------------------------------------------------
[2025-04-13 13:54:40] 2025-04-13 11:54:29,041 | INFO     | 
[2025-04-13 13:54:40] 2025-04-13 11:54:29,042 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/1
[2025-04-13 13:54:40] 2025-04-13 11:54:29,053 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,053 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,053 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | job 6586324247 has completed (purged errors)
[2025-04-13 13:54:40] 2025-04-13 11:54:29,054 | INFO     | overall cleanup function is called
[2025-04-13 13:54:40] 2025-04-13 11:54:30,060 | INFO     | --- collectZombieJob: --- 10, [2236975]
[2025-04-13 13:54:40] 2025-04-13 11:54:30,060 | INFO     | zombie collector waiting for pid 2236975
[2025-04-13 13:54:40] 2025-04-13 11:54:30,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-13 13:54:40] 2025-04-13 11:54:30,060 | INFO     | collected zombie processes
[2025-04-13 13:54:40] 2025-04-13 11:54:30,061 | INFO     | will attempt to kill all subprocesses of pid=2236975
[2025-04-13 13:54:40] 2025-04-13 11:54:30,124 | INFO     | process IDs to be killed: [2236975] (in reverse order)
[2025-04-13 13:54:40] 2025-04-13 11:54:30,155 | WARNING  | found no corresponding commands to process id(s)
[2025-04-13 13:54:40] 2025-04-13 11:54:30,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-13 13:54:40] 2025-04-13 11:54:30,157 | INFO     | did not find any defunct processes belonging to 2236975
[2025-04-13 13:54:40] 2025-04-13 11:54:30,158 | INFO     | did not find any defunct processes belonging to 2236975
[2025-04-13 13:54:40] 2025-04-13 11:54:30,159 | INFO     | ready for new job
[2025-04-13 13:54:40] 2025-04-13 11:54:30,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-13 13:54:40] 2025-04-13 11:54:30,160 | INFO     | **************************************
[2025-04-13 13:54:40] 2025-04-13 11:54:30,160 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-13 13:54:40] 2025-04-13 11:54:30,160 | INFO     | **************************************
[2025-04-13 13:54:40] 2025-04-13 11:54:30,160 | INFO     | 
[2025-04-13 13:54:40] 2025-04-13 11:54:30,161 | INFO     | architecture information:
[2025-04-13 13:54:40] 2025-04-13 11:54:30,161 | INFO     | executing command: cat /etc/os-release
[2025-04-13 13:54:40] 2025-04-13 11:54:30,169 | INFO     | cat /etc/os-release:
[2025-04-13 13:54:40] NAME="CentOS Linux"
[2025-04-13 13:54:40] VERSION="7 (Core)"
[2025-04-13 13:54:40] ID="centos"
[2025-04-13 13:54:40] ID_LIKE="rhel fedora"
[2025-04-13 13:54:40] VERSION_ID="7"
[2025-04-13 13:54:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-13 13:54:40] ANSI_COLOR="0;31"
[2025-04-13 13:54:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-13 13:54:40] HOME_URL="https://www.centos.org/"
[2025-04-13 13:54:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-13 13:54:40] 
[2025-04-13 13:54:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-13 13:54:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-13 13:54:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-13 13:54:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-13 13:54:40] 
[2025-04-13 13:54:40] 2025-04-13 11:54:30,169 | INFO     | **************************************
[2025-04-13 13:54:40] 2025-04-13 11:54:30,670 | INFO     | executing command: df -mP /var/lib/boinc2/slots/1
[2025-04-13 13:54:40] 2025-04-13 11:54:30,679 | INFO     | sufficient remaining disk space (237906165760 B)
[2025-04-13 13:54:40] 2025-04-13 11:54:30,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-13 13:54:40] 2025-04-13 11:54:30,680 | INFO     | current server update state: UPDATING_FINAL
[2025-04-13 13:54:40] 2025-04-13 11:54:30,680 | INFO     | update_server=False
[2025-04-13 13:54:40] 2025-04-13 11:54:30,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-13 13:54:40] 2025-04-13 11:54:30,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-13 13:54:40] 2025-04-13 11:54:30,680 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-13 13:54:40] 2025-04-13 11:54:30,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-13 13:54:40] 2025-04-13 11:54:30,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-13 13:54:40] 2025-04-13 11:54:30,681 | INFO     | found 0 job(s) in 20 queues
[2025-04-13 13:54:40] 2025-04-13 11:54:30,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-13 13:54:40] 2025-04-13 11:54:30,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-13 13:54:40] 2025-04-13 11:54:31,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-13 13:54:40] 2025-04-13 11:54:31,252 | INFO     | aborting loop
[2025-04-13 13:54:40] 2025-04-13 11:54:31,343 | INFO     | all job control threads have been joined
[2025-04-13 13:54:40] 2025-04-13 11:54:31,673 | INFO     | all data control threads have been joined
[2025-04-13 13:54:40] 2025-04-13 11:54:31,685 | INFO     | [job] retrieve thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:31,685 | INFO     | [job] queue monitor thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:31,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:31,807 | INFO     | [job] create_data_payload thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:31,840 | INFO     | [payload] validate_pre thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:32,068 | INFO     | all payload control threads have been joined
[2025-04-13 13:54:40] 2025-04-13 11:54:32,257 | INFO     | [job] job monitor thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:32,347 | INFO     | [job] control thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:32,347 | INFO     | [payload] failed_post thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:32,524 | INFO     | [payload] execute_payloads thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:32,678 | INFO     | [data] control thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:32,684 | INFO     | [data] copytool_out thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:32,842 | INFO     | [data] copytool_in thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:33,000 | INFO     | [job] validate thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:33,074 | INFO     | [payload] control thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:33,282 | INFO     | [payload] validate_post thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:34,686 | INFO     | [data] queue_monitor thread has finished
[2025-04-13 13:54:40] 2025-04-13 11:54:34,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139566328899392)>', '<ExcThread(monitor, started 139565549475584)>']
[2025-04-13 13:54:40] 2025-04-13 11:54:35,699 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-13 13:54:40] 2025-04-13 11:54:35,699 | INFO     | [monitor] control thread has ended
[2025-04-13 13:54:40] 2025-04-13 11:54:39,859 | INFO     | all workflow threads have been joined
[2025-04-13 13:54:40] 2025-04-13 11:54:39,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-13 13:54:40] 2025-04-13 11:54:39,860 | INFO     | traces error code: 0
[2025-04-13 13:54:40] 2025-04-13 11:54:39,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-13 13:54:40] 2025-04-13 11:54:39,937 [wrapper] ==== pilot stdout END ====
[2025-04-13 13:54:40] 2025-04-13 11:54:39,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-13 13:54:40] 2025-04-13 11:54:39,940 [wrapper] pilotpid: 2230565
[2025-04-13 13:54:40] 2025-04-13 11:54:39,942 [wrapper] Pilot exit status: 0
[2025-04-13 13:54:40] 2025-04-13 11:54:39,948 [wrapper] pandaids: 6586324247
[2025-04-13 13:54:40] 2025-04-13 11:54:39,965 [wrapper] cleanup supervisor_pilot 2314244 2230566
[2025-04-13 13:54:40] 2025-04-13 11:54:39,967 [wrapper] Test setup, not cleaning
[2025-04-13 13:54:40] 2025-04-13 11:54:39,969 [wrapper] apfmon messages muted
[2025-04-13 13:54:40] 2025-04-13 11:54:39,970 [wrapper] ==== wrapper stdout END ====
[2025-04-13 13:54:40] 2025-04-13 11:54:39,972 [wrapper] ==== wrapper stderr END ====
[2025-04-13 13:54:40]  *** Error codes and diagnostics ***
[2025-04-13 13:54:40]     "exeErrorCode": 0,
[2025-04-13 13:54:40]     "exeErrorDiag": "",
[2025-04-13 13:54:40]     "pilotErrorCode": 0,
[2025-04-13 13:54:40]     "pilotErrorDiag": "",
[2025-04-13 13:54:40]  *** Listing of results directory ***
[2025-04-13 13:54:40] insgesamt 672876
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc    495897  3. Apr 22:51 pilot3.tar.gz
[2025-04-13 13:54:40] -rwx------ 1 boinc boinc     37140  3. Apr 22:59 runpilot2-wrapper.sh
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc      5111  3. Apr 22:59 queuedata.json
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc       100 13. Apr 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-13 13:54:40] -rwxr-xr-x 1 boinc boinc      7986 13. Apr 10:03 run_atlas
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc       105 13. Apr 10:03 job.xml
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc      6698 13. Apr 10:03 init_data.xml
[2025-04-13 13:54:40] -rw-r--r-- 2 boinc boinc 360139221 13. Apr 10:03 EVNT.43634896._000679.pool.root.1
[2025-04-13 13:54:40] drwxrwx--x 2 boinc boinc      4096 13. Apr 10:03 shared
[2025-04-13 13:54:40] -rw-r--r-- 2 boinc boinc    508886 13. Apr 10:03 input.tar.gz
[2025-04-13 13:54:40] -rw-r--r-- 2 boinc boinc     17569 13. Apr 10:03 start_atlas.sh
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc         0 13. Apr 10:03 boinc_lockfile
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc      2599 13. Apr 10:03 pandaJob.out
[2025-04-13 13:54:40] -rw------- 1 boinc boinc       461 13. Apr 10:03 setup.sh.local
[2025-04-13 13:54:40] -rw------- 1 boinc boinc    985800 13. Apr 10:03 agis_schedconf.cvmfs.json
[2025-04-13 13:54:40] drwx------ 4 boinc boinc      4096 13. Apr 10:03 pilot3
[2025-04-13 13:54:40] -rw------- 1 boinc boinc        95 13. Apr 13:53 pilot_heartbeat.json
[2025-04-13 13:54:40] -rw------- 1 boinc boinc 321775368 13. Apr 13:53 HITS.43634898._017710.pool.root.1
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc       531 13. Apr 13:53 boinc_task_state.xml
[2025-04-13 13:54:40] -rw------- 1 boinc boinc      1023 13. Apr 13:54 memory_monitor_summary.json
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc        28 13. Apr 13:54 wrapper_checkpoint.txt
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc      8192 13. Apr 13:54 boinc_mmap_file
[2025-04-13 13:54:40] -rw------- 1 boinc boinc   1603529 13. Apr 13:54 agis_ddmendpoints.agis.ALL.json
[2025-04-13 13:54:40] -rw------- 1 boinc boinc    322057 13. Apr 13:54 log.43634898._017710.job.log.tgz.1
[2025-04-13 13:54:40] -rw------- 1 boinc boinc      7653 13. Apr 13:54 heartbeat.json
[2025-04-13 13:54:40] -rw------- 1 boinc boinc      4478 13. Apr 13:54 pilotlog.txt
[2025-04-13 13:54:40] -rw------- 1 boinc boinc   1311735 13. Apr 13:54 log.43634898._017710.job.log.1
[2025-04-13 13:54:40] -rw------- 1 boinc boinc       357 13. Apr 13:54 output.list
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc       620 13. Apr 13:54 runtime_log
[2025-04-13 13:54:40] -rw------- 1 boinc boinc   1648640 13. Apr 13:54 result.tar.gz
[2025-04-13 13:54:40] -rw------- 1 boinc boinc       645 13. Apr 13:54 zlZMDmspgK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmcJtKDm1EX3Nn.diag
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc     11346 13. Apr 13:54 runtime_log.err
[2025-04-13 13:54:40] -rw-r--r-- 1 boinc boinc     20537 13. Apr 13:54 stderr.txt
[2025-04-13 13:54:40] HITS file was successfully produced:
[2025-04-13 13:54:40] -rw------- 1 boinc boinc 321775368 13. Apr 13:53 shared/HITS.pool.root.1
[2025-04-13 13:54:40]  *** Contents of shared directory: ***
[2025-04-13 13:54:40] insgesamt 668076
[2025-04-13 13:54:40] -rw-r--r-- 2 boinc boinc 360139221 13. Apr 10:03 ATLAS.root_0
[2025-04-13 13:54:40] -rw-r--r-- 2 boinc boinc    508886 13. Apr 10:03 input.tar.gz
[2025-04-13 13:54:40] -rw-r--r-- 2 boinc boinc     17569 13. Apr 10:03 start_atlas.sh
[2025-04-13 13:54:40] -rw------- 1 boinc boinc 321775368 13. Apr 13:53 HITS.pool.root.1
[2025-04-13 13:54:40] -rw------- 1 boinc boinc   1648640 13. Apr 13:54 result.tar.gz
13:54:41 (2226935): run_atlas exited; CPU time 53480.028766
13:54:41 (2226935): called boinc_finish(0)

</stderr_txt>
]]>

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