Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:52:26 (1950970): wrapper (7.7.26015): starting
08:52:26 (1950970): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 08:52:26] Arguments: --nthreads 12
[2025-04-12 08:52:26] Threads: 12
[2025-04-12 08:52:26] Checking for CVMFS
[2025-04-12 08:52:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 08:52:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 08:52:26] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 08:52:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 08:52:26] 2.12.6.0 4038419 1694 84280 144776 2 187 3770872 4096001 10384 130560 0 4625107 99.999 155281 803 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-12 08:52:26] CVMFS is ok
[2025-04-12 08:52:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 08:52:26] Checking for apptainer binary...
[2025-04-12 08:52:26] apptainer is not installed, using version from CVMFS
[2025-04-12 08:52:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 08:52:26] epyc7v12
[2025-04-12 08:52:26] apptainer works
[2025-04-12 08:52:26] Set ATHENA_PROC_NUMBER=12
[2025-04-12 08:52:26] Set ATHENA_CORE_NUMBER=12
[2025-04-12 08:52:26] Starting ATLAS job with PandaID=6600387490
[2025-04-12 08:52:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 11:13:44]  *** The last 200 lines of the pilot log: ***
[2025-04-12 11:13:44] 2025-04-12 11:13:32,179 | INFO     | sum of deviations: 53243994670.80454
[2025-04-12 11:13:44] 2025-04-12 11:13:32,179 | INFO     | mean x: 1744452315.0977445
[2025-04-12 11:13:44] 2025-04-12 11:13:32,179 | INFO     | mean y: 2580883.015037594
[2025-04-12 11:13:44] 2025-04-12 11:13:32,179 | INFO     | -- intersect: -127319497249.85645
[2025-04-12 11:13:44] 2025-04-12 11:13:32,179 | INFO     | intersect: -127319497249.85645
[2025-04-12 11:13:44] 2025-04-12 11:13:32,179 | INFO     | chi2: 2.2009557120984904
[2025-04-12 11:13:44] 2025-04-12 11:13:32,179 | INFO     | current chi2=2.2009557120984904 (change=55.99724020545136 %)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,180 | INFO     | sum of square deviations: 650277152.6796875
[2025-04-12 11:13:44] 2025-04-12 11:13:32,180 | INFO     | sum of deviations: 21158135323.601562
[2025-04-12 11:13:44] 2025-04-12 11:13:32,180 | INFO     | mean x: 1744452467.6015625
[2025-04-12 11:13:44] 2025-04-12 11:13:32,180 | INFO     | mean y: 2642669.9921875
[2025-04-12 11:13:44] 2025-04-12 11:13:32,180 | INFO     | -- intersect: -56756788632.50244
[2025-04-12 11:13:44] 2025-04-12 11:13:32,180 | INFO     | intersect: -56756788632.50244
[2025-04-12 11:13:44] 2025-04-12 11:13:32,180 | INFO     | chi2: 0.34749054758623726
[2025-04-12 11:13:44] 2025-04-12 11:13:32,181 | INFO     | current chi2=0.34749054758623726 (change=84.2118337195016 %)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,181 | INFO     | sum of square deviations: 577006697.6260151
[2025-04-12 11:13:44] 2025-04-12 11:13:32,181 | INFO     | sum of deviations: 8624260881.195124
[2025-04-12 11:13:44] 2025-04-12 11:13:32,181 | INFO     | mean x: 1744452620.105691
[2025-04-12 11:13:44] 2025-04-12 11:13:32,181 | INFO     | mean y: 2668637.2926829266
[2025-04-12 11:13:44] 2025-04-12 11:13:32,181 | INFO     | -- intersect: -26070883979.295773
[2025-04-12 11:13:44] 2025-04-12 11:13:32,181 | INFO     | intersect: -26070883979.295773
[2025-04-12 11:13:44] 2025-04-12 11:13:32,181 | INFO     | chi2: 0.0769421497377531
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | current chi2=0.0769421497377531 (change=77.85777188121693 %)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | sum of square deviations: 509457280.06779605
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | sum of deviations: 3365047665.457628
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | mean x: 1744452772.6101694
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | mean y: 2680328.618644068
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | -- intersect: -11519712145.9609
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | intersect: -11519712145.9609
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | chi2: 0.0009882993261745368
[2025-04-12 11:13:44] 2025-04-12 11:13:32,182 | INFO     | current chi2=0.0009882993261745368 (change=98.71552935609024 %)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | sum of square deviations: 447403412.72566336
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | sum of deviations: 2531166270.8053102
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | mean x: 1744452925.1061947
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | mean y: 2682367.849557522
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | -- intersect: -9866487780.264482
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | intersect: -9866487780.264482
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | chi2: 0.0004423066173650042
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | current chi2=0.0004423066173650042 (change=55.24568259324186 %)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,183 | INFO     | sum of square deviations: 390605335.8796308
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | sum of deviations: 2030138018.2962961
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | mean x: 1744453077.601852
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | mean y: 2683708.5185185187
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | -- intersect: -9063962823.583242
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | intersect: -9063962823.583242
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | chi2: 0.00033765012538597314
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | current chi2=0.00033765012538597314 (change=23.661525256508988 %)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | left removable region: 60
[2025-04-12 11:13:44] 2025-04-12 11:13:32,184 | INFO     | sum of square deviations: 115722682.31944431
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | sum of deviations: 355584497.375
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | mean x: 1744453809.6527777
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | mean y: 2688741.375
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | -- intersect: -5357545904.647034
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | intersect: -5357545904.647034
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | chi2: 0.0001854133956986392
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | -- intersect: -5357545904.647034
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | current memory leak: 3.07 B/s (using 72 data points, chi2=0.00)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | ..............................
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | . Timing measurements:
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | . get job = 0 s
[2025-04-12 11:13:44] 2025-04-12 11:13:32,185 | INFO     | . initial setup = 1 s
[2025-04-12 11:13:44] 2025-04-12 11:13:32,186 | INFO     | . payload setup = 6 s
[2025-04-12 11:13:44] 2025-04-12 11:13:32,186 | INFO     | . stage-in = 0 s
[2025-04-12 11:13:44] 2025-04-12 11:13:32,186 | INFO     | . payload execution = 8421 s
[2025-04-12 11:13:44] 2025-04-12 11:13:32,186 | INFO     | . stage-out = 0 s
[2025-04-12 11:13:44] 2025-04-12 11:13:32,186 | INFO     | . log creation = 0 s
[2025-04-12 11:13:44] 2025-04-12 11:13:32,186 | INFO     | ..............................
[2025-04-12 11:13:44] 2025-04-12 11:13:32,250 | INFO     | 
[2025-04-12 11:13:44] 2025-04-12 11:13:32,250 | INFO     | job summary report
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | --------------------------------------------------
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | PanDA job id: 6600387490
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | task id: 44075164
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | errors: (none)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | pilot state: finished 
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | transexitcode: 0
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | exeerrorcode: 0
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | exeerrordiag: 
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | exitcode: 0
[2025-04-12 11:13:44] 2025-04-12 11:13:32,251 | INFO     | exitmsg: OK
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | cpuconsumptiontime: 44814 s
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | nevents: 400
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | neventsw: 0
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | pid: 1995115
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | pgrp: 1995115
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | corecount: 12
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | event service: False
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | sizes: {0: 2417351, 5: 2417557, 11: 2417613, 8430: 2445439, 8431: 2454483, 8432: 2454483, 8439: 2454781}
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | --------------------------------------------------
[2025-04-12 11:13:44] 2025-04-12 11:13:32,252 | INFO     | 
[2025-04-12 11:13:44] 2025-04-12 11:13:32,253 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/18
[2025-04-12 11:13:44] 2025-04-12 11:13:32,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,276 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,277 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 11:13:44] 2025-04-12 11:13:32,277 | INFO     | job 6600387490 has completed (purged errors)
[2025-04-12 11:13:44] 2025-04-12 11:13:32,277 | INFO     | overall cleanup function is called
[2025-04-12 11:13:44] 2025-04-12 11:13:33,283 | INFO     | --- collectZombieJob: --- 10, [1995115]
[2025-04-12 11:13:44] 2025-04-12 11:13:33,283 | INFO     | zombie collector waiting for pid 1995115
[2025-04-12 11:13:44] 2025-04-12 11:13:33,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 11:13:44] 2025-04-12 11:13:33,283 | INFO     | collected zombie processes
[2025-04-12 11:13:44] 2025-04-12 11:13:33,283 | INFO     | will attempt to kill all subprocesses of pid=1995115
[2025-04-12 11:13:44] 2025-04-12 11:13:33,663 | INFO     | process IDs to be killed: [1995115] (in reverse order)
[2025-04-12 11:13:44] 2025-04-12 11:13:33,809 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 11:13:44] 2025-04-12 11:13:33,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 11:13:44] 2025-04-12 11:13:33,822 | INFO     | did not find any defunct processes belonging to 1995115
[2025-04-12 11:13:44] 2025-04-12 11:13:33,835 | INFO     | did not find any defunct processes belonging to 1995115
[2025-04-12 11:13:44] 2025-04-12 11:13:33,835 | INFO     | ready for new job
[2025-04-12 11:13:44] 2025-04-12 11:13:33,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 11:13:44] 2025-04-12 11:13:33,836 | INFO     | **************************************
[2025-04-12 11:13:44] 2025-04-12 11:13:33,836 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 11:13:44] 2025-04-12 11:13:33,836 | INFO     | **************************************
[2025-04-12 11:13:44] 2025-04-12 11:13:33,836 | INFO     | 
[2025-04-12 11:13:44] 2025-04-12 11:13:33,864 | INFO     | architecture information:
[2025-04-12 11:13:44] 2025-04-12 11:13:33,864 | INFO     | executing command: cat /etc/os-release
[2025-04-12 11:13:44] 2025-04-12 11:13:33,880 | INFO     | cat /etc/os-release:
[2025-04-12 11:13:44] NAME="CentOS Linux"
[2025-04-12 11:13:44] VERSION="7 (Core)"
[2025-04-12 11:13:44] ID="centos"
[2025-04-12 11:13:44] ID_LIKE="rhel fedora"
[2025-04-12 11:13:44] VERSION_ID="7"
[2025-04-12 11:13:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 11:13:44] ANSI_COLOR="0;31"
[2025-04-12 11:13:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 11:13:44] HOME_URL="https://www.centos.org/"
[2025-04-12 11:13:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 11:13:44] 
[2025-04-12 11:13:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 11:13:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 11:13:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 11:13:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 11:13:44] 
[2025-04-12 11:13:44] 2025-04-12 11:13:33,880 | INFO     | **************************************
[2025-04-12 11:13:44] 2025-04-12 11:13:34,383 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/18
[2025-04-12 11:13:44] 2025-04-12 11:13:34,399 | INFO     | sufficient remaining disk space (311366254592 B)
[2025-04-12 11:13:44] 2025-04-12 11:13:34,399 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 11:13:44] 2025-04-12 11:13:34,399 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 11:13:44] 2025-04-12 11:13:34,399 | INFO     | update_server=False
[2025-04-12 11:13:44] 2025-04-12 11:13:34,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 11:13:44] 2025-04-12 11:13:34,400 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 11:13:44] 2025-04-12 11:13:34,400 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 11:13:44] 2025-04-12 11:13:34,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 11:13:44] 2025-04-12 11:13:34,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 11:13:44] 2025-04-12 11:13:34,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 11:13:44] 2025-04-12 11:13:34,636 | INFO     | aborting loop
[2025-04-12 11:13:44] 2025-04-12 11:13:34,975 | INFO     | all data control threads have been joined
[2025-04-12 11:13:44] 2025-04-12 11:13:35,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 11:13:44] 2025-04-12 11:13:35,403 | INFO     | [job] retrieve thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:35,411 | INFO     | [data] copytool_in thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:35,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 11:13:44] 2025-04-12 11:13:35,567 | INFO     | all payload control threads have been joined
[2025-04-12 11:13:44] 2025-04-12 11:13:35,642 | INFO     | [job] job monitor thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:35,786 | INFO     | all job control threads have been joined
[2025-04-12 11:13:44] 2025-04-12 11:13:35,871 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:35,980 | INFO     | [data] control thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:36,209 | INFO     | [payload] validate_post thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:36,468 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:36,571 | INFO     | [payload] control thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:36,583 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:36,703 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:36,791 | INFO     | [job] control thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:36,887 | INFO     | [job] validate thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:36,915 | INFO     | [payload] failed_post thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:37,220 | INFO     | [data] copytool_out thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:37,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 11:13:44] 2025-04-12 11:13:38,263 | INFO     | [job] queue monitor thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:39,543 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 11:13:44] 2025-04-12 11:13:39,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961344964416)>', '<ExcThread(monitor, started 139960770361088)>']
[2025-04-12 11:13:44] 2025-04-12 11:13:40,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 11:13:44] 2025-04-12 11:13:40,428 | INFO     | [monitor] control thread has ended
[2025-04-12 11:13:44] 2025-04-12 11:13:44,673 | INFO     | all workflow threads have been joined
[2025-04-12 11:13:44] 2025-04-12 11:13:44,674 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 11:13:44] 2025-04-12 11:13:44,674 | INFO     | traces error code: 0
[2025-04-12 11:13:44] 2025-04-12 11:13:44,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 11:13:44] 2025-04-12 11:13:44,777 [wrapper] ==== pilot stdout END ====
[2025-04-12 11:13:44] 2025-04-12 11:13:44,780 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 11:13:44] 2025-04-12 11:13:44,783 [wrapper] pilotpid: 1959938
[2025-04-12 11:13:44] 2025-04-12 11:13:44,786 [wrapper] Pilot exit status: 0
[2025-04-12 11:13:44] 2025-04-12 11:13:44,797 [wrapper] pandaids: 6600387490
[2025-04-12 11:13:44] 2025-04-12 11:13:44,889 [wrapper] cleanup supervisor_pilot 2345851 1959939
[2025-04-12 11:13:44] 2025-04-12 11:13:44,893 [wrapper] Test setup, not cleaning
[2025-04-12 11:13:44] 2025-04-12 11:13:44,896 [wrapper] apfmon messages muted
[2025-04-12 11:13:44] 2025-04-12 11:13:44,899 [wrapper] ==== wrapper stdout END ====
[2025-04-12 11:13:44] 2025-04-12 11:13:44,902 [wrapper] ==== wrapper stderr END ====
[2025-04-12 11:13:44]  *** Error codes and diagnostics ***
[2025-04-12 11:13:44]     "exeErrorCode": 0,
[2025-04-12 11:13:44]     "exeErrorDiag": "",
[2025-04-12 11:13:44]     "pilotErrorCode": 0,
[2025-04-12 11:13:44]     "pilotErrorDiag": "",
[2025-04-12 11:13:44]  *** Listing of results directory ***
[2025-04-12 11:13:44] total 413424
[2025-04-12 11:13:44] -rw-r--r-- 1 boinc boinc    495897 Apr 11 23:55 pilot3.tar.gz
[2025-04-12 11:13:44] -rw-r--r-- 1 boinc boinc      5111 Apr 12 00:06 queuedata.json
[2025-04-12 11:13:44] -rwx------ 1 boinc boinc     37140 Apr 12 00:08 runpilot2-wrapper.sh
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc       100 Apr 12 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 11:13:44] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 08:52 run_atlas
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc       105 Apr 12 08:52 job.xml
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc      6941 Apr 12 08:52 init_data.xml
[2025-04-12 11:13:44] -rw-r--r-- 2 boinc boinc 223583465 Apr 12 08:52 EVNT.44075162._001438.pool.root.1
[2025-04-12 11:13:44] -rw-r--r-- 2 boinc boinc     17569 Apr 12 08:52 start_atlas.sh
[2025-04-12 11:13:44] drwxrwx--x 2 boinc boinc      4096 Apr 12 08:52 shared
[2025-04-12 11:13:44] -rw-r--r-- 2 boinc boinc    508884 Apr 12 08:52 input.tar.gz
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc         0 Apr 12 08:52 boinc_lockfile
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc      2550 Apr 12 08:52 pandaJob.out
[2025-04-12 11:13:44] -rw------- 1 boinc boinc       424 Apr 12 08:52 setup.sh.local
[2025-04-12 11:13:44] -rw------- 1 boinc boinc    986068 Apr 12 08:52 agis_schedconf.cvmfs.json
[2025-04-12 11:13:44] -rw------- 1 boinc boinc   1603529 Apr 12 08:52 agis_ddmendpoints.agis.ALL.json
[2025-04-12 11:13:44] drwx------ 4 boinc boinc      4096 Apr 12 08:52 pilot3
[2025-04-12 11:13:44] -rw------- 1 boinc boinc 193637846 Apr 12 11:12 HITS.44075164._036215.pool.root.1
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc       530 Apr 12 11:13 boinc_task_state.xml
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc        27 Apr 12 11:13 wrapper_checkpoint.txt
[2025-04-12 11:13:44] -rw------- 1 boinc boinc      1023 Apr 12 11:13 memory_monitor_summary.json
[2025-04-12 11:13:44] -rw------- 1 boinc boinc    390852 Apr 12 11:13 log.44075164._036215.job.log.tgz.1
[2025-04-12 11:13:44] -rw------- 1 boinc boinc        95 Apr 12 11:13 pilot_heartbeat.json
[2025-04-12 11:13:44] -rw------- 1 boinc boinc      7648 Apr 12 11:13 heartbeat.json
[2025-04-12 11:13:44] -rw------- 1 boinc boinc      4501 Apr 12 11:13 pilotlog.txt
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc      8192 Apr 12 11:13 boinc_mmap_file
[2025-04-12 11:13:44] -rw------- 1 boinc boinc    750896 Apr 12 11:13 log.44075164._036215.job.log.1
[2025-04-12 11:13:44] -rw------- 1 boinc boinc       357 Apr 12 11:13 output.list
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc       620 Apr 12 11:13 runtime_log
[2025-04-12 11:13:44] -rw------- 1 boinc boinc   1157120 Apr 12 11:13 result.tar.gz
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc     11427 Apr 12 11:13 runtime_log.err
[2025-04-12 11:13:44] -rw------- 1 boinc boinc       651 Apr 12 11:13 ccUNDmHbdN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnzPLDmsc89cn.diag
[2025-04-12 11:13:44] -rw-rw-r-- 1 boinc boinc     20648 Apr 12 11:13 stderr.txt
[2025-04-12 11:13:45] HITS file was successfully produced:
[2025-04-12 11:13:45] -rw------- 1 boinc boinc 193637846 Apr 12 11:12 shared/HITS.pool.root.1
[2025-04-12 11:13:45]  *** Contents of shared directory: ***
[2025-04-12 11:13:45] total 409104
[2025-04-12 11:13:45] -rw-r--r-- 2 boinc boinc 223583465 Apr 12 08:52 ATLAS.root_0
[2025-04-12 11:13:45] -rw-r--r-- 2 boinc boinc     17569 Apr 12 08:52 start_atlas.sh
[2025-04-12 11:13:45] -rw-r--r-- 2 boinc boinc    508884 Apr 12 08:52 input.tar.gz
[2025-04-12 11:13:45] -rw------- 1 boinc boinc 193637846 Apr 12 11:12 HITS.pool.root.1
[2025-04-12 11:13:45] -rw------- 1 boinc boinc   1157120 Apr 12 11:13 result.tar.gz
11:13:46 (1950970): run_atlas exited; CPU time 45269.059086
11:13:46 (1950970): called boinc_finish(0)

</stderr_txt>
]]>

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