Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:34:09 (29493): wrapper (7.7.26015): starting
23:34:09 (29493): wrapper: running run_atlas (--nthreads 12)
[2025-04-11 23:34:09] Arguments: --nthreads 12
[2025-04-11 23:34:09] Threads: 12
[2025-04-11 23:34:09] Checking for CVMFS
[2025-04-11 23:34:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 23:34:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 23:34:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 23:34:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 23:34:09] 2.10.0.0 12610 377 59688 144776 2 187 11852649 16777217 922 130560 0 1193513 99.998 63858 7047 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-04-11 23:34:09] CVMFS is ok
[2025-04-11 23:34:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 23:34:09] Checking for apptainer binary...
[2025-04-11 23:34:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 23:34:09] Running /usr/bin/apptainer --version
[2025-04-11 23:34:09] apptainer version 1.3.6-150600.4.9.1
[2025-04-11 23:34:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 23:34:09] boinc-runner
[2025-04-11 23:34:09] apptainer works
[2025-04-11 23:34:09] Set ATHENA_PROC_NUMBER=12
[2025-04-11 23:34:09] Set ATHENA_CORE_NUMBER=12
[2025-04-11 23:34:09] Starting ATLAS job with PandaID=6586322138
[2025-04-11 23:34:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 00:31:17]  *** The last 200 lines of the pilot log: ***
[2025-04-12 00:31:17]  filesize=348624
[2025-04-12 00:31:17]  filetype=log
[2025-04-12 00:31:17]  guid=a85b78c2-b290-4ead-a920-1220fadef36c
[2025-04-12 00:31:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-12 00:31:17]  is_altstaged=None
[2025-04-12 00:31:17]  is_tar=False
[2025-04-12 00:31:17]  lfn=log.43634898._017062.job.log.tgz.1
[2025-04-12 00:31:17]  mtime=0
[2025-04-12 00:31:17]  protocol_id=None
[2025-04-12 00:31:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-12 00:31:17]  replicas=None
[2025-04-12 00:31:17]  scope=mc23_13p6TeV
[2025-04-12 00:31:17]  status=None
[2025-04-12 00:31:17]  status_code=0
[2025-04-12 00:31:17]  storage_token=
[2025-04-12 00:31:17]  surl=/var/lib/boinc/slots/8/PanDA_Pilot-6586322138/log.43634898._017062.job.log.tgz.1
[2025-04-12 00:31:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/24/log.43634898._017062.job.log.tgz.1
[2025-04-12 00:31:17]  workdir=None
[2025-04-12 00:31:17] ]
[2025-04-12 00:31:17] 2025-04-12 05:30:59,566 | INFO     | transferring file log.43634898._017062.job.log.tgz.1 from /var/lib/boinc/slots/8/PanDA_Pilot-6586322138/log.43634898._017062.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-12 00:31:17] 2025-04-12 05:30:59,566 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/8/PanDA_Pilot-6586322138/log.43634898._017062.job.log.tgz.1 /var/lib/boinc/slots/8/log.43634898._017062.job
[2025-04-12 00:31:17] 2025-04-12 05:30:59,577 | INFO     | adding to output.list: log.43634898._017062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/24/log.43634898._017062.job.log.tg
[2025-04-12 00:31:17] 2025-04-12 05:30:59,578 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-12 00:31:17] 2025-04-12 05:30:59,578 | INFO     | summary of transferred files:
[2025-04-12 00:31:17] 2025-04-12 05:30:59,578 | INFO     |  -- lfn=log.43634898._017062.job.log.tgz.1, status_code=0, status=transferred
[2025-04-12 00:31:17] 2025-04-12 05:30:59,578 | INFO     | stage-out finished correctly
[2025-04-12 00:31:17] 2025-04-12 05:31:01,475 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-12 00:31:17] 2025-04-12 05:31:01,811 | WARNING  | process 7923 can no longer be monitored (due to stat problems) - aborting
[2025-04-12 00:31:17] 2025-04-12 05:31:01,812 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6586322138/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 00:31:17] 2025-04-12 05:31:01,847 | INFO     | number of running child processes to parent process 7923: 1
[2025-04-12 00:31:17] 2025-04-12 05:31:01,848 | INFO     | maximum number of monitored processes: 6
[2025-04-12 00:31:17] 2025-04-12 05:31:02,094 | INFO     | job 6586322138 has state=finished
[2025-04-12 00:31:17] 2025-04-12 05:31:02,094 | INFO     | preparing for final server update for job 6586322138 in state='finished'
[2025-04-12 00:31:17] 2025-04-12 05:31:02,094 | INFO     | this job has now completed (state=finished)
[2025-04-12 00:31:17] 2025-04-12 05:31:02,094 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-12 00:31:17] 2025-04-12 05:31:02,095 | INFO     | log transfer has been attempted: DONE
[2025-04-12 00:31:17] 2025-04-12 05:31:02,095 | INFO     | job 6586322138 has finished - writing final server update
[2025-04-12 00:31:17] 2025-04-12 05:31:02,095 | INFO     | total number of processed events: 400 (read)
[2025-04-12 00:31:17] 2025-04-12 05:31:02,097 | INFO     | executing command: lscpu
[2025-04-12 00:31:17] 2025-04-12 05:31:02,110 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-12 00:31:17] 2025-04-12 05:31:04,191 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-12 00:31:17] 2025-04-12 05:31:04,191 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6586322138/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 00:31:17] 2025-04-12 05:31:04,192 | INFO     | extracted standard info from prmon json
[2025-04-12 00:31:17] 2025-04-12 05:31:04,192 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 00:31:17] 2025-04-12 05:31:04,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 00:31:17] 2025-04-12 05:31:04,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 00:31:17] 2025-04-12 05:31:04,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 00:31:17] 2025-04-12 05:31:04,193 | INFO     | fitting pss+swap vs Time
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | sum of square deviations: 36465800.0
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | sum of deviations: 6009870670.0
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | mean x: 1744434243.0
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | mean y: 2958245.9795918367
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | -- intersect: -287494482993.46533
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | intersect: -287494482993.46533
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | chi2: 0.5024411226774209
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | -- intersect: -287494482993.46533
[2025-04-12 00:31:17] 2025-04-12 05:31:04,194 | INFO     | current memory leak: 164.81 B/s (using 49 data points, chi2=0.50)
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | ..............................
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | . Timing measurements:
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | . get job = 0 s
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | . initial setup = 3 s
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | . payload setup = 2 s
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | . stage-in = 0 s
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | . payload execution = 3384 s
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | . stage-out = 0 s
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | . log creation = 0 s
[2025-04-12 00:31:17] 2025-04-12 05:31:04,195 | INFO     | ..............................
[2025-04-12 00:31:17] 2025-04-12 05:31:04,229 | INFO     | 
[2025-04-12 00:31:17] 2025-04-12 05:31:04,229 | INFO     | job summary report
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | --------------------------------------------------
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | PanDA job id: 6586322138
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | task id: 43634898
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | errors: (none)
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | pilot state: finished 
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | transexitcode: 0
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | exeerrorcode: 0
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | exeerrordiag: 
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | exitcode: 0
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | exitmsg: OK
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | cpuconsumptiontime: 34097 s
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | nevents: 400
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | neventsw: 0
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | pid: 7923
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | pgrp: 7923
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | corecount: 12
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | event service: False
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | sizes: {0: 2417286, 1: 2417428, 3: 2417634, 11: 2417662, 3390: 2443304, 3391: 2452245, 3393: 2452429, 3395: 2452599}
[2025-04-12 00:31:17] 2025-04-12 05:31:04,230 | INFO     | --------------------------------------------------
[2025-04-12 00:31:17] 2025-04-12 05:31:04,231 | INFO     | 
[2025-04-12 00:31:17] 2025-04-12 05:31:04,231 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-04-12 00:31:17] 2025-04-12 05:31:04,242 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 00:31:17] 2025-04-12 05:31:04,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 00:31:17] 2025-04-12 05:31:04,244 | INFO     | job 6586322138 has completed (purged errors)
[2025-04-12 00:31:17] 2025-04-12 05:31:04,244 | INFO     | overall cleanup function is called
[2025-04-12 00:31:17] 2025-04-12 05:31:05,253 | INFO     | --- collectZombieJob: --- 10, [7923]
[2025-04-12 00:31:17] 2025-04-12 05:31:05,253 | INFO     | zombie collector waiting for pid 7923
[2025-04-12 00:31:17] 2025-04-12 05:31:05,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 00:31:17] 2025-04-12 05:31:05,253 | INFO     | collected zombie processes
[2025-04-12 00:31:17] 2025-04-12 05:31:05,253 | INFO     | will attempt to kill all subprocesses of pid=7923
[2025-04-12 00:31:17] 2025-04-12 05:31:05,299 | INFO     | process IDs to be killed: [7923] (in reverse order)
[2025-04-12 00:31:17] 2025-04-12 05:31:05,323 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 00:31:17] 2025-04-12 05:31:05,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 00:31:17] 2025-04-12 05:31:05,326 | INFO     | did not find any defunct processes belonging to 7923
[2025-04-12 00:31:17] 2025-04-12 05:31:05,328 | INFO     | did not find any defunct processes belonging to 7923
[2025-04-12 00:31:17] 2025-04-12 05:31:05,328 | INFO     | ready for new job
[2025-04-12 00:31:17] 2025-04-12 05:31:05,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 00:31:17] 2025-04-12 05:31:05,330 | INFO     | **************************************
[2025-04-12 00:31:17] 2025-04-12 05:31:05,330 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 00:31:17] 2025-04-12 05:31:05,330 | INFO     | **************************************
[2025-04-12 00:31:17] 2025-04-12 05:31:05,331 | INFO     | 
[2025-04-12 00:31:17] 2025-04-12 05:31:05,331 | INFO     | architecture information:
[2025-04-12 00:31:17] 2025-04-12 05:31:05,331 | INFO     | executing command: cat /etc/os-release
[2025-04-12 00:31:17] 2025-04-12 05:31:05,340 | INFO     | cat /etc/os-release:
[2025-04-12 00:31:17] NAME="CentOS Linux"
[2025-04-12 00:31:17] VERSION="7 (Core)"
[2025-04-12 00:31:17] ID="centos"
[2025-04-12 00:31:17] ID_LIKE="rhel fedora"
[2025-04-12 00:31:17] VERSION_ID="7"
[2025-04-12 00:31:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 00:31:17] ANSI_COLOR="0;31"
[2025-04-12 00:31:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 00:31:17] HOME_URL="https://www.centos.org/"
[2025-04-12 00:31:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 00:31:17] 
[2025-04-12 00:31:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 00:31:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 00:31:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 00:31:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 00:31:17] 
[2025-04-12 00:31:17] 2025-04-12 05:31:05,340 | INFO     | **************************************
[2025-04-12 00:31:17] 2025-04-12 05:31:05,842 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-04-12 00:31:17] 2025-04-12 05:31:05,853 | INFO     | sufficient remaining disk space (3885087326208 B)
[2025-04-12 00:31:17] 2025-04-12 05:31:05,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 00:31:17] 2025-04-12 05:31:05,854 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 00:31:17] 2025-04-12 05:31:05,854 | INFO     | update_server=False
[2025-04-12 00:31:17] 2025-04-12 05:31:05,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 00:31:17] 2025-04-12 05:31:05,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 00:31:17] 2025-04-12 05:31:05,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 00:31:17] 2025-04-12 05:31:05,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 00:31:17] 2025-04-12 05:31:05,854 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 00:31:17] 2025-04-12 05:31:05,855 | INFO     | aborting loop
[2025-04-12 00:31:17] 2025-04-12 05:31:05,855 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 00:31:17] 2025-04-12 05:31:05,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 00:31:17] 2025-04-12 05:31:05,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 00:31:17] 2025-04-12 05:31:05,918 | INFO     | all job control threads have been joined
[2025-04-12 00:31:17] 2025-04-12 05:31:06,176 | INFO     | all payload control threads have been joined
[2025-04-12 00:31:17] 2025-04-12 05:31:06,482 | INFO     | all data control threads have been joined
[2025-04-12 00:31:17] 2025-04-12 05:31:06,859 | INFO     | [job] retrieve thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:06,860 | INFO     | [job] queue monitor thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:06,860 | INFO     | [job] job monitor thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:06,923 | INFO     | [job] control thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:07,142 | INFO     | [data] copytool_in thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:07,181 | INFO     | [payload] control thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:07,228 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:07,395 | INFO     | [payload] failed_post thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:07,487 | INFO     | [data] control thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:07,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 00:31:17] 2025-04-12 05:31:07,751 | INFO     | [payload] validate_post thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:07,860 | INFO     | [data] copytool_out thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:08,070 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:08,078 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:08,094 | INFO     | [job] validate thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:08,319 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:11,518 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 00:31:17] 2025-04-12 05:31:12,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680703608640)>', '<ExcThread(monitor, started 139680347563776)>']
[2025-04-12 00:31:17] 2025-04-12 05:31:12,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 00:31:17] 2025-04-12 05:31:12,887 | INFO     | [monitor] control thread has ended
[2025-04-12 00:31:17] 2025-04-12 05:31:17,476 | INFO     | all workflow threads have been joined
[2025-04-12 00:31:17] 2025-04-12 05:31:17,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 00:31:17] 2025-04-12 05:31:17,477 | INFO     | traces error code: 0
[2025-04-12 00:31:17] 2025-04-12 05:31:17,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 00:31:17] 2025-04-12 05:31:17,516 [wrapper] ==== pilot stdout END ====
[2025-04-12 00:31:17] 2025-04-12 05:31:17,518 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 00:31:17] 2025-04-12 05:31:17,519 [wrapper] pilotpid: 975
[2025-04-12 00:31:17] 2025-04-12 05:31:17,521 [wrapper] Pilot exit status: 0
[2025-04-12 00:31:17] 2025-04-12 05:31:17,526 [wrapper] pandaids: 6586322138
[2025-04-12 00:31:17] 2025-04-12 05:31:17,540 [wrapper] cleanup supervisor_pilot 32473 976
[2025-04-12 00:31:17] 2025-04-12 05:31:17,541 [wrapper] Test setup, not cleaning
[2025-04-12 00:31:17] 2025-04-12 05:31:17,543 [wrapper] apfmon messages muted
[2025-04-12 00:31:17] 2025-04-12 05:31:17,544 [wrapper] ==== wrapper stdout END ====
[2025-04-12 00:31:17] 2025-04-12 05:31:17,546 [wrapper] ==== wrapper stderr END ====
[2025-04-12 00:31:17]  *** Error codes and diagnostics ***
[2025-04-12 00:31:17]     "exeErrorCode": 0,
[2025-04-12 00:31:17]     "exeErrorDiag": "",
[2025-04-12 00:31:17]     "pilotErrorCode": 0,
[2025-04-12 00:31:17]     "pilotErrorDiag": "",
[2025-04-12 00:31:17]  *** Listing of results directory ***
[2025-04-12 00:31:17] total 666364
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc    495897 Apr  3 14:25 pilot3.tar.gz
[2025-04-12 00:31:17] -rwx------ 1 boinc boinc     37140 Apr  3 14:38 runpilot2-wrapper.sh
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc      5111 Apr  3 14:38 queuedata.json
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc       100 Apr 11 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 00:31:17] -rwxr-xr-x 1 boinc boinc      7986 Apr 11 23:34 run_atlas
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc       105 Apr 11 23:34 job.xml
[2025-04-12 00:31:17] -rw-r--r-- 2 boinc boinc     17569 Apr 11 23:34 start_atlas.sh
[2025-04-12 00:31:17] drwxrwx--x 1 boinc boinc        76 Apr 11 23:34 shared
[2025-04-12 00:31:17] -rw-r--r-- 2 boinc boinc    508884 Apr 11 23:34 input.tar.gz
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc     10040 Apr 11 23:34 init_data.xml
[2025-04-12 00:31:17] -rw-r--r-- 2 boinc boinc 360127746 Apr 11 23:34 EVNT.43634896._000628.pool.root.1
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc         0 Apr 11 23:34 boinc_lockfile
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc      2600 Apr 11 23:34 pandaJob.out
[2025-04-12 00:31:17] -rw------- 1 boinc boinc       473 Apr 11 23:34 setup.sh.local
[2025-04-12 00:31:17] -rw------- 1 boinc boinc    986068 Apr 11 23:34 agis_schedconf.cvmfs.json
[2025-04-12 00:31:17] -rw------- 1 boinc boinc   1603529 Apr 11 23:34 agis_ddmendpoints.agis.ALL.json
[2025-04-12 00:31:17] drwx------ 1 boinc boinc       368 Apr 11 23:34 pilot3
[2025-04-12 00:31:17] -rw------- 1 boinc boinc 317000407 Apr 12 00:30 HITS.43634898._017062.pool.root.1
[2025-04-12 00:31:17] -rw------- 1 boinc boinc        95 Apr 12 00:30 pilot_heartbeat.json
[2025-04-12 00:31:17] -rw------- 1 boinc boinc      1023 Apr 12 00:30 memory_monitor_summary.json
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc       531 Apr 12 00:30 boinc_task_state.xml
[2025-04-12 00:31:17] -rw------- 1 boinc boinc    348624 Apr 12 00:30 log.43634898._017062.job.log.tgz.1
[2025-04-12 00:31:17] -rw------- 1 boinc boinc      7678 Apr 12 00:31 heartbeat.json
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc      8192 Apr 12 00:31 boinc_mmap_file
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc        27 Apr 12 00:31 wrapper_checkpoint.txt
[2025-04-12 00:31:17] -rw------- 1 boinc boinc      4478 Apr 12 00:31 pilotlog.txt
[2025-04-12 00:31:17] -rw------- 1 boinc boinc    354111 Apr 12 00:31 log.43634898._017062.job.log.1
[2025-04-12 00:31:17] -rw------- 1 boinc boinc       357 Apr 12 00:31 output.list
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc       620 Apr 12 00:31 runtime_log
[2025-04-12 00:31:17] -rw------- 1 boinc boinc    716800 Apr 12 00:31 result.tar.gz
[2025-04-12 00:31:17] -rw------- 1 boinc boinc       650 Apr 12 00:31 xIuMDmbZfK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmSuHLDmHsR7Lm.diag
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc     11478 Apr 12 00:31 runtime_log.err
[2025-04-12 00:31:17] -rw-r--r-- 1 boinc boinc     20820 Apr 12 00:31 stderr.txt
[2025-04-12 00:31:17] HITS file was successfully produced:
[2025-04-12 00:31:17] -rw------- 1 boinc boinc 317000407 Apr 12 00:30 shared/HITS.pool.root.1
[2025-04-12 00:31:17]  *** Contents of shared directory: ***
[2025-04-12 00:31:17] total 662480
[2025-04-12 00:31:17] -rw-r--r-- 2 boinc boinc     17569 Apr 11 23:34 start_atlas.sh
[2025-04-12 00:31:17] -rw-r--r-- 2 boinc boinc    508884 Apr 11 23:34 input.tar.gz
[2025-04-12 00:31:17] -rw-r--r-- 2 boinc boinc 360127746 Apr 11 23:34 ATLAS.root_0
[2025-04-12 00:31:17] -rw------- 1 boinc boinc 317000407 Apr 12 00:30 HITS.pool.root.1
[2025-04-12 00:31:17] -rw------- 1 boinc boinc    716800 Apr 12 00:31 result.tar.gz
00:31:19 (29493): run_atlas exited; CPU time 34115.269002
00:31:19 (29493): called boinc_finish(0)

</stderr_txt>
]]>

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