Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-12 06:11:32 (56134): Detected: vboxwrapper 26206
2025-04-12 06:11:32 (56134): Detected: BOINC client v8.0.2
2025-04-12 06:11:32 (56134): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-04-12 06:11:32 (56134): Detected: Sandbox Configuration Enabled
2025-04-12 06:11:32 (56134): Successfully copied 'init_data.xml' to the shared directory.
2025-04-12 06:11:32 (56134): Create VM. (boinc_113462f50fe1a496, slot#10)
2025-04-12 06:11:32 (56134): Setting Memory Size for VM. (4800MB)
2025-04-12 06:11:32 (56134): Setting CPU Count for VM. (8)
2025-04-12 06:11:32 (56134): Setting Chipset Options for VM.
2025-04-12 06:11:32 (56134): Setting Graphics Controller Options for VM.
2025-04-12 06:11:32 (56134): Setting Boot Options for VM.
2025-04-12 06:11:32 (56134): Setting Network Configuration for NAT.
2025-04-12 06:11:32 (56134): Enabling VM Network Access.
2025-04-12 06:11:32 (56134): Disabling USB Support for VM.
2025-04-12 06:11:32 (56134): Disabling COM Port Support for VM.
2025-04-12 06:11:32 (56134): Disabling Audio Support for VM.
2025-04-12 06:11:32 (56134): Disabling Clipboard Support for VM.
2025-04-12 06:11:32 (56134): Disabling Drag and Drop Support for VM.
2025-04-12 06:11:32 (56134): Adding storage controller(s) to VM.
2025-04-12 06:11:32 (56134): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-12 06:11:34 (56134): Adding VirtualBox Guest Additions to VM.
2025-04-12 06:11:34 (56134): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-12 06:11:34 (56134): forwarding host port 56637 to guest port 80
2025-04-12 06:11:34 (56134): Enabling remote desktop for VM.
2025-04-12 06:11:34 (56134): Enabling shared directory for VM.
2025-04-12 06:11:34 (56134): Starting VM using VBoxManage interface. (boinc_113462f50fe1a496, slot#10)
2025-04-12 06:11:37 (56134): Successfully started VM. (PID = '56209')
2025-04-12 06:11:37 (56134): Reporting VM Process ID to BOINC.
2025-04-12 06:11:37 (56134): Guest Log: BIOS: VirtualBox 7.0.22
2025-04-12 06:11:37 (56134): Guest Log: CPUID EDX: 0x178bfbff
2025-04-12 06:11:37 (56134): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-12 06:11:37 (56134): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-12 06:11:37 (56134): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-12 06:11:37 (56134): Detected: Web Application Enabled (http://localhost:56637)
2025-04-12 06:11:37 (56134): Detected: Remote Desktop Enabled (localhost:56638)
2025-04-12 06:11:37 (56134): Preference change detected
2025-04-12 06:11:37 (56134): Setting CPU throttle for VM. (20%)
2025-04-12 06:11:38 (56134): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 06:11:39 (56134): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-12 06:11:39 (56134): Guest Log: BIOS: Booting from Hard Disk...
2025-04-12 06:11:43 (56134): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-12 06:11:43 (56134): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-12 06:11:43 (56134): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-12 06:12:03 (56134): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-12 06:12:03 (56134): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-12 06:12:29 (56134): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-12 06:12:29 (56134): Guest Log: 00:00:00.000118 main     Log opened 2025-04-12T04:12:26.568460000Z
2025-04-12 06:12:29 (56134): Guest Log: 00:00:00.000209 main     OS Product: Linux
2025-04-12 06:12:29 (56134): Guest Log: 00:00:00.000246 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-12 06:12:29 (56134): Guest Log: 00:00:00.000279 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-12 06:12:29 (56134): Guest Log: 00:00:00.000315 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-12 06:12:29 (56134): Guest Log: 00:00:00.000316 main     Process ID: 1366
2025-04-12 06:12:29 (56134): Guest Log: 00:00:00.000316 main     Package type: LINUX_64BITS_GENERIC
2025-04-12 06:12:29 (56134): Guest Log: 00:00:00.001718 main     5.2.32 r132073 started. Verbose level = 0
2025-04-12 06:12:29 (56134): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-12 06:12:29 (56134): Guest Log: [INFO] Mounting shared directory
2025-04-12 06:12:29 (56134): Guest Log: [INFO] Checking for init_data.xml
2025-04-12 06:12:35 (56134): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-12 06:12:35 (56134): Guest Log: [INFO] Detected branch: prod
2025-04-12 06:12:36 (56134): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-12 06:12:36 (56134): Guest Log: Copying input files
2025-04-12 06:12:43 (56134): Guest Log: Copied input files into RunAtlas.
2025-04-12 06:12:43 (56134): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-12 06:12:43 (56134): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-12 06:12:43 (56134): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-12 06:12:43 (56134): Guest Log: Further information can be found at the LHC@home message board.
2025-04-12 06:12:53 (56134): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-12 06:12:53 (56134): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-12 06:12:53 (56134): Guest Log: 2.6.3.0 1643 0 32136 144776 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-12 06:12:55 (56134): Guest Log: copied the webapp to /var/www
2025-04-12 06:12:55 (56134): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-12 06:12:55 (56134): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-12 06:12:55 (56134): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-12 06:12:56 (56134): Guest Log:  *** Starting ATLAS job. (PandaID=6600385978 taskID=44075164) ***
2025-04-12 07:51:24 (56134): Status Report: Elapsed Time: '6000.000000'
2025-04-12 07:51:24 (56134): Status Report: CPU Time: '24947.230000'
2025-04-12 08:21:42 (56134): Guest Log:  *** Job finished ***
2025-04-12 08:21:42 (56134): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:07,651 | INFO     | [job] control thread has finished
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:07,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:11,776 | INFO     | [data] queue_monitor thread has finished
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:11,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198319523648)>', '<ExcThread(monitor, started 140197522040576)>']
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:12,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:12,358 | INFO     | [monitor] control thread has ended
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:16,789 | INFO     | all workflow threads have been joined
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:16,789 | INFO     | end of generic workflow (traces error code: 0)
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:16,790 | INFO     | traces error code: 0
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:16,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:17,123 [wrapper] ==== pilot stdout END ====
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:17,133 [wrapper] ==== wrapper stdout RESUME ====
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:17,142 [wrapper] pilotpid: 6022
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:17,152 [wrapper] Pilot exit status: 0
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:18,113 [wrapper] pandaids: 6600385978
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:18,819 [wrapper] cleanup supervisor_pilot  2448 6023
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:18,831 [wrapper] Test setup, not cleaning
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:19,021 [wrapper] apfmon messages muted
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:19,122 [wrapper] ==== wrapper stdout END ====
2025-04-12 08:21:42 (56134): Guest Log: 2025-04-12 06:21:19,132 [wrapper] ==== wrapper stderr END ====
2025-04-12 08:21:42 (56134): Guest Log:  *** Error codes and diagnostics ***
2025-04-12 08:21:43 (56134): Guest Log:     "exeErrorCode": 0,
2025-04-12 08:21:43 (56134): Guest Log:     "exeErrorDiag": "",
2025-04-12 08:21:43 (56134): Guest Log:     "pilotErrorCode": 0,
2025-04-12 08:21:43 (56134): Guest Log:     "pilotErrorDiag": "",
2025-04-12 08:21:43 (56134): Guest Log:  *** Listing of results directory ***
2025-04-12 08:21:43 (56134): Guest Log: total 192308
2025-04-12 08:21:43 (56134): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 11 23:28 pilot3.tar.gz
2025-04-12 08:21:43 (56134): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 11 23:41 queuedata.json
2025-04-12 08:21:43 (56134): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 11 23:42 runpilot2-wrapper.sh
2025-04-12 08:21:43 (56134): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 12 04:12 start_atlas.sh
2025-04-12 08:21:43 (56134): Guest Log: -rw-r-----. 1 atlas atlas    508882 Apr 12 04:12 input.tar.gz
2025-04-12 08:21:43 (56134): Guest Log: -rw-r--r--. 1 atlas atlas      8641 Apr 12 04:12 init_data.xml
2025-04-12 08:21:43 (56134): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 12 04:12 EVNT.44075162._001406.pool.root.1 -> /data/./ATLAS.root_0
2025-04-12 08:21:43 (56134): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 12 04:12 pandaJob.out
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas       424 Apr 12 04:13 setup.sh.local
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas    986068 Apr 12 04:14 agis_schedconf.cvmfs.json
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 12 04:14 agis_ddmendpoints.agis.ALL.json
2025-04-12 08:21:43 (56134): Guest Log: drwx------. 4 atlas atlas      4096 Apr 12 04:14 pilot3
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas 191721082 Apr 12 06:16 HITS.44075164._035708.pool.root.1
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas      1033 Apr 12 06:18 memory_monitor_summary.json
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas    293382 Apr 12 06:18 log.44075164._035708.job.log.tgz.1
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas        95 Apr 12 06:20 pilot_heartbeat.json
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas      7731 Apr 12 06:21 heartbeat.json
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 12 06:21 pilotlog.txt
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas    419698 Apr 12 06:21 log.44075164._035708.job.log.1
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas       357 Apr 12 06:21 output.list
2025-04-12 08:21:43 (56134): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 12 06:21 runtime_log
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas    737280 Apr 12 06:21 result.tar.gz
2025-04-12 08:21:43 (56134): Guest Log: -rw-------. 1 atlas atlas       672 Apr 12 06:21 T5dMDmlBdN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDsPLDmRajsDn.diag
2025-04-12 08:21:43 (56134): Guest Log: -rw-r--r--. 1 atlas atlas     10992 Apr 12 06:21 runtime_log.err
2025-04-12 08:21:43 (56134): Guest Log: Looking for outputfile HITS.44075164._035708.pool.root.1
2025-04-12 08:21:44 (56134): Guest Log: HITS file was successfully produced
2025-04-12 08:21:44 (56134): Guest Log: -rw-------. 1 atlas atlas 191721082 Apr 12 06:16 /home/atlas/RunAtlas/HITS.44075164._035708.pool.root.1
2025-04-12 08:21:45 (56134): Guest Log: Successfully finished the ATLAS job!
2025-04-12 08:21:45 (56134): Guest Log: Copying the results back to the shared directory!
2025-04-12 08:21:48 (56134): Guest Log:  *** Contents of shared directory: ***
2025-04-12 08:21:48 (56134): Guest Log: total 217312
2025-04-12 08:21:48 (56134): Guest Log: -rw-rw----. 1 root root 221242614 Apr 12 04:11 ATLAS.root_0
2025-04-12 08:21:48 (56134): Guest Log: -rw-rw-r--. 1 root root      8641 Apr 12 04:11 init_data.xml
2025-04-12 08:21:48 (56134): Guest Log: -rw-rw----. 1 root root    508882 Apr 12 04:11 input.tar.gz
2025-04-12 08:21:48 (56134): Guest Log: -rw-r--r--. 1 root root    737280 Apr 12  2025 result.tar.gz
2025-04-12 08:21:48 (56134): Guest Log: -rw-rw----. 1 root root     17569 Apr 12 04:11 start_atlas.sh
2025-04-12 08:21:48 (56134): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-12 08:21:49 (56134): VM Completion File Detected.
2025-04-12 08:21:49 (56134): Powering off VM.
2025-04-12 08:21:50 (56134): Successfully stopped VM.
2025-04-12 08:21:50 (56134): Deregistering VM. (boinc_113462f50fe1a496, slot#10)
2025-04-12 08:21:50 (56134): Removing network bandwidth throttle group from VM.
2025-04-12 08:21:50 (56134): Removing VM from VirtualBox.
08:21:55 (56134): called boinc_finish(0)

</stderr_txt>
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