Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-12 03:03:22 (12812): Detected: vboxwrapper 26206
2025-04-12 03:03:22 (12812): Detected: BOINC client v8.0.4
2025-04-12 03:03:22 (12812): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-12 03:03:23 (12812): Successfully copied 'init_data.xml' to the shared directory.
2025-04-12 03:03:23 (12812): Create VM. (boinc_5687a57e4357d217, slot#14)
2025-04-12 03:03:24 (12812): Setting Memory Size for VM. (4096MB)
2025-04-12 03:03:24 (12812): Setting CPU Count for VM. (1)
2025-04-12 03:03:24 (12812): Setting Chipset Options for VM.
2025-04-12 03:03:24 (12812): Setting Graphics Controller Options for VM.
2025-04-12 03:03:25 (12812): Setting Boot Options for VM.
2025-04-12 03:03:25 (12812): Setting Network Configuration for NAT.
2025-04-12 03:03:25 (12812): Enabling VM Network Access.
2025-04-12 03:03:25 (12812): Disabling USB Support for VM.
2025-04-12 03:03:26 (12812): Disabling COM Port Support for VM.
2025-04-12 03:03:26 (12812): Disabling LPT Port Support for VM.
2025-04-12 03:03:26 (12812): Disabling Audio Support for VM.
2025-04-12 03:03:27 (12812): Disabling Clipboard Support for VM.
2025-04-12 03:03:27 (12812): Disabling Drag and Drop Support for VM.
2025-04-12 03:03:27 (12812): Adding storage controller(s) to VM.
2025-04-12 03:03:27 (12812): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-12 03:03:28 (12812): Adding VirtualBox Guest Additions to VM.
2025-04-12 03:03:28 (12812): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-12 03:03:28 (12812): forwarding host port 56851 to guest port 80
2025-04-12 03:03:29 (12812): Enabling remote desktop for VM.
2025-04-12 03:03:29 (12812): Required extension pack not installed, remote desktop not enabled.
2025-04-12 03:03:29 (12812): Enabling shared directory for VM.
2025-04-12 03:03:29 (12812): Starting VM using VBoxManage interface. (boinc_5687a57e4357d217, slot#14)
2025-04-12 03:03:37 (12812): Successfully started VM. (PID = '10756')
2025-04-12 03:03:37 (12812): Reporting VM Process ID to BOINC.
2025-04-12 03:03:37 (12812): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-12 03:03:37 (12812): Guest Log: CPUID EDX: 0x178bfbff
2025-04-12 03:03:37 (12812): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-12 03:03:37 (12812): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-12 03:03:37 (12812): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-12 03:03:37 (12812): Detected: Web Application Enabled (http://localhost:56851)
2025-04-12 03:03:37 (12812): Preference change detected
2025-04-12 03:03:37 (12812): Setting CPU throttle for VM. (100%)
2025-04-12 03:03:37 (12812): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-12 03:03:39 (12812): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-12 03:03:39 (12812): Guest Log: BIOS: Booting from Hard Disk...
2025-04-12 03:03:43 (12812): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-12 03:03:43 (12812): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-12 03:03:43 (12812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-12 03:03:49 (12812): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-12 03:03:49 (12812): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-12 03:04:07 (12812): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-12 03:04:07 (12812): Guest Log: 00:00:00.000301 main     Log opened 2025-04-12T03:04:05.159462000Z
2025-04-12 03:04:07 (12812): Guest Log: 00:00:00.000492 main     OS Product: Linux
2025-04-12 03:04:07 (12812): Guest Log: 00:00:00.000549 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-12 03:04:07 (12812): Guest Log: 00:00:00.000595 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-12 03:04:07 (12812): Guest Log: 00:00:00.000640 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-12 03:04:07 (12812): Guest Log: 00:00:00.000641 main     Process ID: 1269
2025-04-12 03:04:07 (12812): Guest Log: 00:00:00.000642 main     Package type: LINUX_64BITS_GENERIC
2025-04-12 03:04:07 (12812): Guest Log: 00:00:00.003975 main     5.2.32 r132073 started. Verbose level = 0
2025-04-12 03:04:07 (12812): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-12 03:04:07 (12812): Guest Log: [INFO] Mounting shared directory
2025-04-12 03:04:07 (12812): Guest Log: [INFO] Checking for init_data.xml
2025-04-12 03:04:15 (12812): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-12 03:04:15 (12812): Guest Log: [INFO] Detected branch: prod
2025-04-12 03:04:15 (12812): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-12 03:04:15 (12812): Guest Log: Copying input files
2025-04-12 03:04:17 (12812): Guest Log: 00:00:10.050992 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 410 162 000ns (GuestNow=1 744 419 856 797 950 000 ns GuestLast=1 744 427 045 208 112 000 ns fSetTimeLastLoop=true )
2025-04-12 03:04:17 (12812): Guest Log: Copied input files into RunAtlas.
2025-04-12 03:04:17 (12812): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-12 03:04:25 (12812): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-12 03:04:25 (12812): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-12 03:04:25 (12812): Guest Log: 2.6.3.0 1542 0 29500 144776 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-12 03:04:26 (12812): Guest Log: copied the webapp to /var/www
2025-04-12 03:04:26 (12812): Guest Log: core_number=1
2025-04-12 03:04:26 (12812): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-12 03:04:26 (12812): Guest Log:  *** Starting ATLAS job. (PandaID=6600379310 taskID=44075164) ***
2025-04-12 04:43:42 (12812): Status Report: Elapsed Time: '6000.000000'
2025-04-12 04:43:42 (12812): Status Report: CPU Time: '5079.968750'
2025-04-12 06:23:48 (12812): Status Report: Elapsed Time: '12000.000000'
2025-04-12 06:23:48 (12812): Status Report: CPU Time: '11063.062500'
2025-04-12 08:03:53 (12812): Status Report: Elapsed Time: '18000.000000'
2025-04-12 08:03:53 (12812): Status Report: CPU Time: '17045.468750'
2025-04-12 09:43:59 (12812): Status Report: Elapsed Time: '24000.000000'
2025-04-12 09:43:59 (12812): Status Report: CPU Time: '23029.718750'
2025-04-12 11:24:04 (12812): Status Report: Elapsed Time: '30000.000000'
2025-04-12 11:24:04 (12812): Status Report: CPU Time: '29012.671875'
2025-04-12 13:04:10 (12812): Status Report: Elapsed Time: '36000.000000'
2025-04-12 13:04:10 (12812): Status Report: CPU Time: '34995.531250'
2025-04-12 14:44:15 (12812): Status Report: Elapsed Time: '42000.000000'
2025-04-12 14:44:15 (12812): Status Report: CPU Time: '40980.437500'
2025-04-12 16:24:21 (12812): Status Report: Elapsed Time: '48000.000000'
2025-04-12 16:24:21 (12812): Status Report: CPU Time: '46963.312500'
2025-04-12 16:29:13 (12812): Guest Log:  *** Job finished ***
2025-04-12 16:29:13 (12812): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:03,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:04,413 | INFO     | [job] queue monitor thread has finished
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:06,099 | INFO     | [data] queue_monitor thread has finished
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:07,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216582907712)>', '<ExcThread(monitor, started 140216270558976)>']
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:08,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:08,476 | INFO     | [monitor] control thread has ended
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:12,988 | INFO     | all workflow threads have been joined
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:12,988 | INFO     | end of generic workflow (traces error code: 0)
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:12,988 | INFO     | traces error code: 0
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:12,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,078 [wrapper] ==== pilot stdout END ====
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,081 [wrapper] ==== wrapper stdout RESUME ====
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,084 [wrapper] pilotpid: 5798
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,088 [wrapper] Pilot exit status: 0
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,131 [wrapper] pandaids: 6600379310
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,162 [wrapper] cleanup supervisor_pilot  2230 5799
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,167 [wrapper] Test setup, not cleaning
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,170 [wrapper] apfmon messages muted
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,174 [wrapper] ==== wrapper stdout END ====
2025-04-12 16:29:13 (12812): Guest Log: 2025-04-12 14:29:13,178 [wrapper] ==== wrapper stderr END ====
2025-04-12 16:29:13 (12812): Guest Log:  *** Error codes and diagnostics ***
2025-04-12 16:29:13 (12812): Guest Log:     "exeErrorCode": 0,
2025-04-12 16:29:13 (12812): Guest Log:     "exeErrorDiag": "",
2025-04-12 16:29:13 (12812): Guest Log:     "pilotErrorCode": 0,
2025-04-12 16:29:13 (12812): Guest Log:     "pilotErrorDiag": "",
2025-04-12 16:29:13 (12812): Guest Log:  *** Listing of results directory ***
2025-04-12 16:29:13 (12812): Guest Log: total 202200
2025-04-12 16:29:13 (12812): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 11 21:44 pilot3.tar.gz
2025-04-12 16:29:13 (12812): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 11 21:48 runpilot2-wrapper.sh
2025-04-12 16:29:13 (12812): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 11 21:49 queuedata.json
2025-04-12 16:29:13 (12812): Guest Log: -rwxr-xr-x. 1 atlas atlas      9363 Apr 12 01:04 init_data.xml
2025-04-12 16:29:13 (12812): Guest Log: -rwxr-xr-x. 1 atlas atlas    508888 Apr 12 01:04 input.tar.gz
2025-04-12 16:29:13 (12812): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 12 01:04 start_atlas.sh
2025-04-12 16:29:13 (12812): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 12 01:04 EVNT.44075162._001231.pool.root.1 -> /data/./ATLAS.root_0
2025-04-12 16:29:13 (12812): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Apr 12 01:04 pandaJob.out
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas       460 Apr 12 01:04 setup.sh.local
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas    986068 Apr 12 01:04 agis_schedconf.cvmfs.json
2025-04-12 16:29:13 (12812): Guest Log: drwx------. 4 atlas atlas      4096 Apr 12 01:04 pilot3
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas 193702742 Apr 12 14:28 HITS.44075164._032060.pool.root.1
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas        95 Apr 12 14:28 pilot_heartbeat.json
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas      1022 Apr 12 14:28 memory_monitor_summary.json
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 12 14:28 agis_ddmendpoints.agis.ALL.json
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas    585933 Apr 12 14:28 log.44075164._032060.job.log.tgz.1
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas      7675 Apr 12 14:28 heartbeat.json
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 12 14:29 pilotlog.txt
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas   4201416 Apr 12 14:29 log.44075164._032060.job.log.1
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas       357 Apr 12 14:29 output.list
2025-04-12 16:29:13 (12812): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 12 14:29 runtime_log
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas   4802560 Apr 12 14:29 result.tar.gz
2025-04-12 16:29:13 (12812): Guest Log: -rw-r--r--. 1 atlas atlas     11168 Apr 12 14:29 runtime_log.err
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas       656 Apr 12 14:29 Nt4MDmIQbN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmkMPLDmh3a3km.diag
2025-04-12 16:29:13 (12812): Guest Log: Looking for outputfile HITS.44075164._032060.pool.root.1
2025-04-12 16:29:13 (12812): Guest Log: HITS file was successfully produced
2025-04-12 16:29:13 (12812): Guest Log: -rw-------. 1 atlas atlas 193702742 Apr 12 14:28 /home/atlas/RunAtlas/HITS.44075164._032060.pool.root.1
2025-04-12 16:29:15 (12812): Guest Log: Successfully finished the ATLAS job!
2025-04-12 16:29:15 (12812): Guest Log: Copying the results back to the shared directory!
2025-04-12 16:29:15 (12812): Guest Log:  *** Contents of shared directory: ***
2025-04-12 16:29:15 (12812): Guest Log: total 408824
2025-04-12 16:29:15 (12812): Guest Log: -rwxrwxrwx. 1 root root 219578964 Apr 12 01:03 ATLAS.root_0
2025-04-12 16:29:15 (12812): Guest Log: -rwxrwxrwx. 1 root root 193702742 Apr 12 14:29 HITS.pool.root.1
2025-04-12 16:29:15 (12812): Guest Log: -rwxrwxrwx. 1 root root      9363 Apr 12 01:03 init_data.xml
2025-04-12 16:29:15 (12812): Guest Log: -rwxrwxrwx. 1 root root    508888 Apr 12 01:03 input.tar.gz
2025-04-12 16:29:15 (12812): Guest Log: -rwxrwxrwx. 1 root root   4802560 Apr 12 14:29 result.tar.gz
2025-04-12 16:29:15 (12812): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 12 01:03 start_atlas.sh
2025-04-12 16:29:15 (12812): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-12 16:29:15 (12812): VM Completion File Detected.
2025-04-12 16:29:15 (12812): Powering off VM.
2025-04-12 16:29:16 (12812): Successfully stopped VM.
2025-04-12 16:29:16 (12812): Deregistering VM. (boinc_5687a57e4357d217, slot#14)
2025-04-12 16:29:16 (12812): Removing network bandwidth throttle group from VM.
2025-04-12 16:29:16 (12812): Removing VM from VirtualBox.
16:29:21 (12812): called boinc_finish(0)

</stderr_txt>
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