Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 14:33:19 (6501): Detected: vboxwrapper 26206
2025-04-17 14:33:19 (6501): Detected: BOINC client v7.24.1
2025-04-17 14:33:19 (6501): Detected: VirtualBox VboxManage Interface (Version: 6.1.30)
2025-04-17 14:33:19 (6501): Detected: Sandbox Configuration Enabled
2025-04-17 14:33:19 (6501): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 14:33:20 (6501): Create VM. (boinc_ce5752765336a4cc, slot#2)
2025-04-17 14:33:20 (6501): Setting Memory Size for VM. (4400MB)
2025-04-17 14:33:20 (6501): Setting CPU Count for VM. (4)
2025-04-17 14:33:20 (6501): Setting Chipset Options for VM.
2025-04-17 14:33:20 (6501): Setting Graphics Controller Options for VM.
2025-04-17 14:33:20 (6501): Setting Boot Options for VM.
2025-04-17 14:33:20 (6501): Setting Network Configuration for NAT.
2025-04-17 14:33:20 (6501): Enabling VM Network Access.
2025-04-17 14:33:20 (6501): Disabling USB Support for VM.
2025-04-17 14:33:20 (6501): Disabling COM Port Support for VM.
2025-04-17 14:33:20 (6501): Disabling Audio Support for VM.
2025-04-17 14:33:20 (6501): Disabling Clipboard Support for VM.
2025-04-17 14:33:20 (6501): Disabling Drag and Drop Support for VM.
2025-04-17 14:33:20 (6501): Adding storage controller(s) to VM.
2025-04-17 14:33:21 (6501): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 14:33:21 (6501): Adding VirtualBox Guest Additions to VM.
2025-04-17 14:33:21 (6501): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 14:33:21 (6501): forwarding host port 51637 to guest port 80
2025-04-17 14:33:21 (6501): Enabling remote desktop for VM.
2025-04-17 14:33:21 (6501): Required extension pack not installed, remote desktop not enabled.
2025-04-17 14:33:21 (6501): Enabling shared directory for VM.
2025-04-17 14:33:21 (6501): Starting VM using VBoxManage interface. (boinc_ce5752765336a4cc, slot#2)
2025-04-17 14:33:23 (6501): Successfully started VM. (PID = '6568')
2025-04-17 14:33:23 (6501): Reporting VM Process ID to BOINC.
2025-04-17 14:33:23 (6501): Guest Log: BIOS: VirtualBox 6.1.30
2025-04-17 14:33:23 (6501): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 14:33:23 (6501): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 14:33:23 (6501): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 14:33:23 (6501): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 14:33:23 (6501): Detected: Web Application Enabled (http://localhost:51637)
2025-04-17 14:33:23 (6501): Preference change detected
2025-04-17 14:33:23 (6501): Setting CPU throttle for VM. (40%)
2025-04-17 14:33:23 (6501): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 14:33:25 (6501): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 14:33:25 (6501): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 14:33:30 (6501): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 14:33:30 (6501): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 14:33:30 (6501): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 14:33:43 (6501): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 14:33:43 (6501): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 14:33:57 (6501): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 14:33:57 (6501): Guest Log: 00:00:00.000737 main     Log opened 2025-04-17T21:33:55.586104000Z
2025-04-17 14:33:57 (6501): Guest Log: 00:00:00.001042 main     OS Product: Linux
2025-04-17 14:33:57 (6501): Guest Log: 00:00:00.001130 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 14:33:57 (6501): Guest Log: 00:00:00.001237 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 14:33:57 (6501): Guest Log: 00:00:00.001322 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 14:33:57 (6501): Guest Log: 00:00:00.001323 main     Process ID: 1300
2025-04-17 14:33:57 (6501): Guest Log: 00:00:00.001324 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 14:33:57 (6501): Guest Log: 00:00:00.004433 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 14:33:57 (6501): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 14:33:57 (6501): Guest Log: [INFO] Mounting shared directory
2025-04-17 14:33:57 (6501): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 14:34:04 (6501): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 14:34:04 (6501): Guest Log: [INFO] Detected branch: prod
2025-04-17 14:34:04 (6501): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 14:34:04 (6501): Guest Log: Copying input files
2025-04-17 14:34:09 (6501): Guest Log: Copied input files into RunAtlas.
2025-04-17 14:34:09 (6501): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 14:34:09 (6501): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 14:34:09 (6501): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 14:34:09 (6501): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 14:34:20 (6501): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 14:34:20 (6501): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 14:34:20 (6501): Guest Log: 2.6.3.0 1592 0 30188 144979 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 14:34:22 (6501): Guest Log: copied the webapp to /var/www
2025-04-17 14:34:22 (6501): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-17 14:34:22 (6501): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-17 14:34:22 (6501): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 14:34:22 (6501): Guest Log:  *** Starting ATLAS job. (PandaID=6600383048 taskID=44075164) ***
2025-04-17 16:12:44 (6501): Status Report: Elapsed Time: '6000.000000'
2025-04-17 16:12:44 (6501): Status Report: CPU Time: '6862.580000'
2025-04-17 17:52:07 (6501): Status Report: Elapsed Time: '12000.000000'
2025-04-17 17:52:07 (6501): Status Report: CPU Time: '16143.420000'
2025-04-17 19:31:29 (6501): Status Report: Elapsed Time: '18000.000000'
2025-04-17 19:31:29 (6501): Status Report: CPU Time: '25424.550000'
2025-04-17 21:10:51 (6501): Status Report: Elapsed Time: '24000.000000'
2025-04-17 21:10:51 (6501): Status Report: CPU Time: '34712.520000'
2025-04-17 22:50:13 (6501): Status Report: Elapsed Time: '30000.000000'
2025-04-17 22:50:13 (6501): Status Report: CPU Time: '43986.870000'
2025-04-17 23:00:03 (6501): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 02:00:01 (6501): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 02:00:06 (6501): Guest Log: 08:26:12.235647 timesync vgsvcTimeSyncWorker: Radical host time change: 10 808 281 000 000ns (HostNow=1 744 966 806 126 000 000 ns HostLast=1 744 955 997 845 000 000 ns)
2025-04-18 02:00:16 (6501): Guest Log: 08:26:22.237052 timesync vgsvcTimeSyncWorker: Radical guest time change: 10 808 331 109 000ns (GuestNow=1 744 966 816 139 608 000 ns GuestLast=1 744 956 007 808 499 000 ns fSetTimeLastLoop=true )
2025-04-18 03:29:35 (6501): Status Report: Elapsed Time: '36000.000000'
2025-04-18 03:29:35 (6501): Status Report: CPU Time: '53280.900000'
2025-04-18 05:08:57 (6501): Status Report: Elapsed Time: '42000.000000'
2025-04-18 05:08:57 (6501): Status Report: CPU Time: '62567.370000'
2025-04-18 06:01:53 (6501): Guest Log:  *** Job finished ***
2025-04-18 06:01:53 (6501): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:39,050 | INFO     | [data] queue_monitor thread has finished
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:44,837 | INFO     | job.realtimelogging is not enabled
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:45,838 | INFO     | [payload] run_realtimelog thread has finished
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:45,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668532225856)>', '<ExcThread(monitor, started 140667468629760)>']
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:46,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:46,763 | INFO     | [monitor] control thread has ended
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:50,967 | INFO     | all workflow threads have been joined
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:50,968 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:50,968 | INFO     | traces error code: 0
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:50,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,214 [wrapper] ==== pilot stdout END ====
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,222 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,231 [wrapper] pilotpid: 5920
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,240 [wrapper] Pilot exit status: 0
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,347 [wrapper] pandaids: 6600383048
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,431 [wrapper] cleanup supervisor_pilot 17040 5921
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,442 [wrapper] Test setup, not cleaning
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,453 [wrapper] apfmon messages muted
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,500 [wrapper] ==== wrapper stdout END ====
2025-04-18 06:01:53 (6501): Guest Log: 2025-04-18 13:01:51,543 [wrapper] ==== wrapper stderr END ====
2025-04-18 06:01:53 (6501): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 06:01:53 (6501): Guest Log:     "exeErrorCode": 0,
2025-04-18 06:01:53 (6501): Guest Log:     "exeErrorDiag": "",
2025-04-18 06:01:53 (6501): Guest Log:     "pilotErrorCode": 0,
2025-04-18 06:01:53 (6501): Guest Log:     "pilotErrorDiag": "",
2025-04-18 06:01:53 (6501): Guest Log:  *** Listing of results directory ***
2025-04-18 06:01:53 (6501): Guest Log: total 200516
2025-04-18 06:01:53 (6501): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 11 22:27 queuedata.json
2025-04-18 06:01:53 (6501): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 11 22:27 pilot3.tar.gz
2025-04-18 06:01:53 (6501): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 11 22:28 runpilot2-wrapper.sh
2025-04-18 06:01:53 (6501): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 17 21:34 start_atlas.sh
2025-04-18 06:01:53 (6501): Guest Log: -rw-r-----. 1 atlas atlas    508881 Apr 17 21:34 input.tar.gz
2025-04-18 06:01:53 (6501): Guest Log: -rw-r--r--. 1 atlas atlas      8577 Apr 17 21:34 init_data.xml
2025-04-18 06:01:53 (6501): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 21:34 EVNT.44075162._001345.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 06:01:53 (6501): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 17 21:34 pandaJob.out
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 21:34 setup.sh.local
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas    990266 Apr 17 21:35 agis_schedconf.cvmfs.json
2025-04-18 06:01:53 (6501): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 21:35 pilot3
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas 194995184 Apr 18 12:59 HITS.44075164._034418.pool.root.1
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas      1036 Apr 18 13:00 memory_monitor_summary.json
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 13:00 agis_ddmendpoints.agis.ALL.json
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas        98 Apr 18 13:01 pilot_heartbeat.json
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas    515902 Apr 18 13:01 log.44075164._034418.job.log.tgz.1
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas      7746 Apr 18 13:01 heartbeat.json
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 18 13:01 pilotlog.txt
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas   2751578 Apr 18 13:01 log.44075164._034418.job.log.1
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 13:01 output.list
2025-04-18 06:01:53 (6501): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 13:01 runtime_log
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas   3287040 Apr 18 13:01 result.tar.gz
2025-04-18 06:01:53 (6501): Guest Log: -rw-r--r--. 1 atlas atlas     10975 Apr 18 13:01 runtime_log.err
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas       672 Apr 18 13:01 bj7KDmJ2bN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvfPLDmx5okPo.diag
2025-04-18 06:01:53 (6501): Guest Log: Looking for outputfile HITS.44075164._034418.pool.root.1
2025-04-18 06:01:53 (6501): Guest Log: HITS file was successfully produced
2025-04-18 06:01:53 (6501): Guest Log: -rw-------. 1 atlas atlas 194995184 Apr 18 12:59 /home/atlas/RunAtlas/HITS.44075164._034418.pool.root.1
2025-04-18 06:01:53 (6501): Guest Log: Successfully finished the ATLAS job!
2025-04-18 06:01:53 (6501): Guest Log: Copying the results back to the shared directory!
2025-04-18 06:01:53 (6501): Guest Log:  *** Contents of shared directory: ***
2025-04-18 06:01:53 (6501): Guest Log: total 232728
2025-04-18 06:01:53 (6501): Guest Log: -rw-rw----. 1 root root 220044123 Apr 17 21:33 ATLAS.root_0
2025-04-18 06:01:54 (6501): Guest Log: -rw-rw-r--. 1 root root      8577 Apr 17 21:33 init_data.xml
2025-04-18 06:01:54 (6501): Guest Log: -rw-rw----. 1 root root    508881 Apr 17 21:33 input.tar.gz
2025-04-18 06:01:54 (6501): Guest Log: -rw-r--r--. 1 root root   3287040 Apr 18 13:01 result.tar.gz
2025-04-18 06:01:54 (6501): Guest Log: -rw-rw----. 1 root root     17569 Apr 17 21:33 start_atlas.sh
2025-04-18 06:01:54 (6501): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 06:01:54 (6501): VM Completion File Detected.
2025-04-18 06:01:54 (6501): Powering off VM.
2025-04-18 06:01:55 (6501): Successfully stopped VM.
2025-04-18 06:01:55 (6501): Deregistering VM. (boinc_ce5752765336a4cc, slot#2)
2025-04-18 06:01:55 (6501): Removing network bandwidth throttle group from VM.
2025-04-18 06:01:55 (6501): Removing VM from VirtualBox.
06:02:01 (6501): called boinc_finish(0)

</stderr_txt>
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