Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:00:36 (2604125): wrapper (7.7.26015): starting
02:00:36 (2604125): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 02:00:36] Arguments: --nthreads 12
[2025-04-12 02:00:36] Threads: 12
[2025-04-12 02:00:36] Checking for CVMFS
[2025-04-12 02:00:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 02:00:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 02:00:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 02:00:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 02:00:36] 2.12.7.0 9969 15759 309588 144776 2 80 44961039 46080001 4744 130560 50 176412104 99.938 38789254 6272 http://sampacs01.if.usp.br:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-12 02:00:36] CVMFS is ok
[2025-04-12 02:00:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 02:00:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 02:00:36] Further information can be found at the LHC@home message board.
[2025-04-12 02:00:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 02:00:36] Checking for apptainer binary...
[2025-04-12 02:00:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-12 02:00:36] Running /usr/bin/apptainer --version
[2025-04-12 02:00:36] apptainer version 1.3.6-1.el9
[2025-04-12 02:00:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 02:00:36] mff2104.farm.particle.cz
[2025-04-12 02:00:36] apptainer works
[2025-04-12 02:00:36] Set ATHENA_PROC_NUMBER=12
[2025-04-12 02:00:36] Set ATHENA_CORE_NUMBER=12
[2025-04-12 02:00:36] Starting ATLAS job with PandaID=6600379325
[2025-04-12 02:00:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 03:13:42]  *** The last 200 lines of the pilot log: ***
[2025-04-12 03:13:42]  guid=50110db4-1897-44e1-aa42-44ec1f8e11dc
[2025-04-12 03:13:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-12 03:13:42]  is_altstaged=None
[2025-04-12 03:13:42]  is_tar=False
[2025-04-12 03:13:42]  lfn=log.44075164._032075.job.log.tgz.1
[2025-04-12 03:13:42]  mtime=0
[2025-04-12 03:13:42]  protocol_id=None
[2025-04-12 03:13:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-12 03:13:42]  replicas=None
[2025-04-12 03:13:42]  scope=mc23_13p6TeV
[2025-04-12 03:13:42]  status=None
[2025-04-12 03:13:42]  status_code=0
[2025-04-12 03:13:42]  storage_token=
[2025-04-12 03:13:42]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-6600379325/log.44075164._032075.job.log.tgz.1
[2025-04-12 03:13:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/e1/log.44075164._032075.job.log.tgz.1
[2025-04-12 03:13:42]  workdir=None
[2025-04-12 03:13:42] ]
[2025-04-12 03:13:42] 2025-04-12 01:13:22,311 | INFO     | transferring file log.44075164._032075.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-6600379325/log.44075164._032075.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-12 03:13:42] 2025-04-12 01:13:22,311 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-6600379325/log.44075164._032075.job.log.tgz.1 /scratch/.boinc/slots/5/log.44075164._032075.j
[2025-04-12 03:13:42] 2025-04-12 01:13:22,390 | INFO     | adding to output.list: log.44075164._032075.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/e1/log.44075164._032075.job.log.tg
[2025-04-12 03:13:42] 2025-04-12 01:13:22,391 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-12 03:13:42] 2025-04-12 01:13:22,391 | INFO     | summary of transferred files:
[2025-04-12 03:13:42] 2025-04-12 01:13:22,391 | INFO     |  -- lfn=log.44075164._032075.job.log.tgz.1, status_code=0, status=transferred
[2025-04-12 03:13:42] 2025-04-12 01:13:22,391 | INFO     | stage-out finished correctly
[2025-04-12 03:13:42] 2025-04-12 01:13:22,447 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-12 03:13:42] 2025-04-12 01:13:24,442 | INFO     | job 6600379325 has state=finished
[2025-04-12 03:13:42] 2025-04-12 01:13:24,442 | INFO     | preparing for final server update for job 6600379325 in state='finished'
[2025-04-12 03:13:42] 2025-04-12 01:13:24,442 | INFO     | this job has now completed (state=finished)
[2025-04-12 03:13:42] 2025-04-12 01:13:24,442 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-12 03:13:42] 2025-04-12 01:13:24,442 | INFO     | log transfer has been attempted: DONE
[2025-04-12 03:13:42] 2025-04-12 01:13:24,442 | INFO     | job 6600379325 has finished - writing final server update
[2025-04-12 03:13:42] 2025-04-12 01:13:24,443 | INFO     | total number of processed events: 400 (read)
[2025-04-12 03:13:42] 2025-04-12 01:13:24,447 | INFO     | executing command: lscpu
[2025-04-12 03:13:42] 2025-04-12 01:13:24,508 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-12 03:13:42] 2025-04-12 01:13:27,493 | WARNING  | process 2683185 can no longer be monitored (due to stat problems) - aborting
[2025-04-12 03:13:42] 2025-04-12 01:13:27,493 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6600379325/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 03:13:42] 2025-04-12 01:13:27,717 | INFO     | number of running child processes to parent process 2683185: 1
[2025-04-12 03:13:42] 2025-04-12 01:13:27,717 | INFO     | maximum number of monitored processes: 6
[2025-04-12 03:13:42] 2025-04-12 01:13:27,882 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-12 03:13:42] 2025-04-12 01:13:27,882 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6600379325/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 03:13:42] 2025-04-12 01:13:27,883 | INFO     | extracted standard info from prmon json
[2025-04-12 03:13:42] 2025-04-12 01:13:27,883 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 03:13:42] 2025-04-12 01:13:27,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 03:13:42] 2025-04-12 01:13:27,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 03:13:42] 2025-04-12 01:13:27,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 03:13:42] 2025-04-12 01:13:27,885 | INFO     | fitting pss+swap vs Time
[2025-04-12 03:13:42] 2025-04-12 01:13:27,885 | INFO     | sum of square deviations: 81266640.0
[2025-04-12 03:13:42] 2025-04-12 01:13:27,886 | INFO     | sum of deviations: 19053965947.5
[2025-04-12 03:13:42] 2025-04-12 01:13:27,886 | INFO     | mean x: 1744418319.5
[2025-04-12 03:13:42] 2025-04-12 01:13:27,886 | INFO     | mean y: 2571235.578125
[2025-04-12 03:13:42] 2025-04-12 01:13:27,886 | INFO     | -- intersect: -408997816352.0984
[2025-04-12 03:13:42] 2025-04-12 01:13:27,886 | INFO     | intersect: -408997816352.0984
[2025-04-12 03:13:42] 2025-04-12 01:13:27,886 | INFO     | chi2: 1.8641426664852803
[2025-04-12 03:13:42] 2025-04-12 01:13:27,886 | INFO     | -- intersect: -408997816352.0984
[2025-04-12 03:13:42] 2025-04-12 01:13:27,886 | INFO     | current memory leak: 234.46 B/s (using 64 data points, chi2=1.86)
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | ..............................
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | . Timing measurements:
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | . get job = 0 s
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | . initial setup = 19 s
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | . payload setup = 9 s
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | . stage-in = 0 s
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | . payload execution = 4310 s
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | . stage-out = 0 s
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | . log creation = 0 s
[2025-04-12 03:13:42] 2025-04-12 01:13:27,887 | INFO     | ..............................
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | 
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | job summary report
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | --------------------------------------------------
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | PanDA job id: 6600379325
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | task id: 44075164
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | errors: (none)
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | pilot state: finished 
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | transexitcode: 0
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | exeerrorcode: 0
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | exeerrordiag: 
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | exitcode: 0
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | exitmsg: OK
[2025-04-12 03:13:42] 2025-04-12 01:13:27,954 | INFO     | cpuconsumptiontime: 38975 s
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | nevents: 400
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | neventsw: 0
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | pid: 2683185
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | pgrp: 2683185
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | corecount: 12
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | event service: False
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | sizes: {0: 2417158, 1: 2417357, 5: 2417563, 11: 2417619, 4324: 2443779, 4325: 2452906, 4330: 2453020}
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | --------------------------------------------------
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | 
[2025-04-12 03:13:42] 2025-04-12 01:13:27,955 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | job 6600379325 has completed (purged errors)
[2025-04-12 03:13:42] 2025-04-12 01:13:27,972 | INFO     | overall cleanup function is called
[2025-04-12 03:13:42] 2025-04-12 01:13:28,980 | INFO     | --- collectZombieJob: --- 10, [2683185]
[2025-04-12 03:13:42] 2025-04-12 01:13:28,980 | INFO     | zombie collector waiting for pid 2683185
[2025-04-12 03:13:42] 2025-04-12 01:13:28,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 03:13:42] 2025-04-12 01:13:28,981 | INFO     | collected zombie processes
[2025-04-12 03:13:42] 2025-04-12 01:13:28,981 | INFO     | will attempt to kill all subprocesses of pid=2683185
[2025-04-12 03:13:42] 2025-04-12 01:13:29,204 | INFO     | process IDs to be killed: [2683185] (in reverse order)
[2025-04-12 03:13:42] 2025-04-12 01:13:29,322 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 03:13:42] 2025-04-12 01:13:29,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 03:13:42] 2025-04-12 01:13:29,331 | INFO     | did not find any defunct processes belonging to 2683185
[2025-04-12 03:13:42] 2025-04-12 01:13:29,338 | INFO     | did not find any defunct processes belonging to 2683185
[2025-04-12 03:13:42] 2025-04-12 01:13:29,338 | INFO     | ready for new job
[2025-04-12 03:13:42] 2025-04-12 01:13:29,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 03:13:42] 2025-04-12 01:13:29,339 | INFO     | **************************************
[2025-04-12 03:13:42] 2025-04-12 01:13:29,339 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 03:13:42] 2025-04-12 01:13:29,339 | INFO     | **************************************
[2025-04-12 03:13:42] 2025-04-12 01:13:29,339 | INFO     | 
[2025-04-12 03:13:42] 2025-04-12 01:13:29,343 | INFO     | architecture information:
[2025-04-12 03:13:42] 2025-04-12 01:13:29,343 | INFO     | executing command: cat /etc/os-release
[2025-04-12 03:13:42] 2025-04-12 01:13:29,355 | INFO     | cat /etc/os-release:
[2025-04-12 03:13:42] NAME="CentOS Linux"
[2025-04-12 03:13:42] VERSION="7 (Core)"
[2025-04-12 03:13:42] ID="centos"
[2025-04-12 03:13:42] ID_LIKE="rhel fedora"
[2025-04-12 03:13:42] VERSION_ID="7"
[2025-04-12 03:13:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 03:13:42] ANSI_COLOR="0;31"
[2025-04-12 03:13:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 03:13:42] HOME_URL="https://www.centos.org/"
[2025-04-12 03:13:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 03:13:42] 
[2025-04-12 03:13:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 03:13:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 03:13:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 03:13:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 03:13:42] 
[2025-04-12 03:13:42] 2025-04-12 01:13:29,355 | INFO     | **************************************
[2025-04-12 03:13:42] 2025-04-12 01:13:29,858 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-04-12 03:13:42] 2025-04-12 01:13:29,872 | INFO     | sufficient remaining disk space (1675748179968 B)
[2025-04-12 03:13:42] 2025-04-12 01:13:29,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 03:13:42] 2025-04-12 01:13:29,873 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 03:13:42] 2025-04-12 01:13:29,873 | INFO     | update_server=False
[2025-04-12 03:13:42] 2025-04-12 01:13:29,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 03:13:42] 2025-04-12 01:13:29,873 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 03:13:42] 2025-04-12 01:13:29,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 03:13:42] 2025-04-12 01:13:29,874 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 03:13:42] 2025-04-12 01:13:29,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 03:13:42] 2025-04-12 01:13:29,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 03:13:42] 2025-04-12 01:13:30,220 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-12 03:13:42] 2025-04-12 01:13:30,221 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-12 03:13:42] 2025-04-12 01:13:30,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 03:13:42] 2025-04-12 01:13:30,221 | INFO     | will abort loop
[2025-04-12 03:13:42] 2025-04-12 01:13:30,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 03:13:42] 2025-04-12 01:13:30,519 | INFO     | all job control threads have been joined
[2025-04-12 03:13:42] 2025-04-12 01:13:30,779 | INFO     | all data control threads have been joined
[2025-04-12 03:13:42] 2025-04-12 01:13:30,878 | INFO     | [job] retrieve thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:30,879 | INFO     | [job] queue monitor thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,071 | INFO     | [data] copytool_in thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,224 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,225 | INFO     | [job] job monitor thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,280 | INFO     | all payload control threads have been joined
[2025-04-12 03:13:42] 2025-04-12 01:13:31,415 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,525 | INFO     | [job] control thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,584 | INFO     | [payload] failed_post thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,642 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:31,785 | INFO     | [data] control thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:32,258 | INFO     | [job] validate thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:32,285 | INFO     | [payload] control thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:32,357 | INFO     | [payload] validate_post thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:32,463 | INFO     | [data] copytool_out thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:33,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 03:13:42] 2025-04-12 01:13:37,018 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 03:13:42] 2025-04-12 01:13:37,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453813114688)>', '<ExcThread(monitor, started 140453324244736)>']
[2025-04-12 03:13:42] 2025-04-12 01:13:37,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 03:13:42] 2025-04-12 01:13:37,915 | INFO     | [monitor] control thread has ended
[2025-04-12 03:13:42] 2025-04-12 01:13:42,335 | INFO     | all workflow threads have been joined
[2025-04-12 03:13:42] 2025-04-12 01:13:42,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 03:13:42] 2025-04-12 01:13:42,335 | INFO     | traces error code: 0
[2025-04-12 03:13:42] 2025-04-12 01:13:42,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 03:13:42] 2025-04-12 01:13:42,456 [wrapper] ==== pilot stdout END ====
[2025-04-12 03:13:42] 2025-04-12 01:13:42,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 03:13:42] 2025-04-12 01:13:42,461 [wrapper] pilotpid: 2614459
[2025-04-12 03:13:42] 2025-04-12 01:13:42,464 [wrapper] Pilot exit status: 0
[2025-04-12 03:13:42] 2025-04-12 01:13:42,472 [wrapper] pandaids: 6600379325
[2025-04-12 03:13:42] 2025-04-12 01:13:42,530 [wrapper] cleanup supervisor_pilot 2811319 2614460
[2025-04-12 03:13:42] 2025-04-12 01:13:42,533 [wrapper] Test setup, not cleaning
[2025-04-12 03:13:42] 2025-04-12 01:13:42,535 [wrapper] apfmon messages muted
[2025-04-12 03:13:42] 2025-04-12 01:13:42,538 [wrapper] ==== wrapper stdout END ====
[2025-04-12 03:13:42] 2025-04-12 01:13:42,540 [wrapper] ==== wrapper stderr END ====
[2025-04-12 03:13:42]  *** Error codes and diagnostics ***
[2025-04-12 03:13:42]     "exeErrorCode": 0,
[2025-04-12 03:13:42]     "exeErrorDiag": "",
[2025-04-12 03:13:42]     "pilotErrorCode": 0,
[2025-04-12 03:13:42]     "pilotErrorDiag": "",
[2025-04-12 03:13:42]  *** Listing of results directory ***
[2025-04-12 03:13:42] total 416048
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc    495897 Apr 11 23:44 pilot3.tar.gz
[2025-04-12 03:13:42] -rwx------ 1 boinc boinc     37140 Apr 11 23:49 runpilot2-wrapper.sh
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc      5111 Apr 11 23:49 queuedata.json
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc       100 Apr 12 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 03:13:42] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 02:00 run_atlas
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc       105 Apr 12 02:00 job.xml
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc      6654 Apr 12 02:00 init_data.xml
[2025-04-12 03:13:42] -rw-r--r-- 2 boinc boinc 219578964 Apr 12 02:00 EVNT.44075162._001231.pool.root.1
[2025-04-12 03:13:42] -rw-r--r-- 2 boinc boinc     17569 Apr 12 02:00 start_atlas.sh
[2025-04-12 03:13:42] drwxrwx--x 2 boinc boinc      4096 Apr 12 02:00 shared
[2025-04-12 03:13:42] -rw-r--r-- 2 boinc boinc    508885 Apr 12 02:00 input.tar.gz
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc         0 Apr 12 02:00 boinc_lockfile
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc      2551 Apr 12 02:00 pandaJob.out
[2025-04-12 03:13:42] -rw------- 1 boinc boinc       424 Apr 12 02:00 setup.sh.local
[2025-04-12 03:13:42] -rw------- 1 boinc boinc    986068 Apr 12 02:01 agis_schedconf.cvmfs.json
[2025-04-12 03:13:42] -rw------- 1 boinc boinc   1603529 Apr 12 02:01 agis_ddmendpoints.agis.ALL.json
[2025-04-12 03:13:42] drwx------ 4 boinc boinc      4096 Apr 12 02:01 pilot3
[2025-04-12 03:13:42] -rw------- 1 boinc boinc 201020614 Apr 12 03:12 HITS.44075164._032075.pool.root.1
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc       529 Apr 12 03:12 boinc_task_state.xml
[2025-04-12 03:13:42] -rw------- 1 boinc boinc        95 Apr 12 03:12 pilot_heartbeat.json
[2025-04-12 03:13:42] -rw------- 1 boinc boinc      1024 Apr 12 03:13 memory_monitor_summary.json
[2025-04-12 03:13:42] -rw------- 1 boinc boinc    369442 Apr 12 03:13 log.44075164._032075.job.log.tgz.1
[2025-04-12 03:13:42] -rw------- 1 boinc boinc      7697 Apr 12 03:13 heartbeat.json
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc      8192 Apr 12 03:13 boinc_mmap_file
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc        27 Apr 12 03:13 wrapper_checkpoint.txt
[2025-04-12 03:13:42] -rw------- 1 boinc boinc      4665 Apr 12 03:13 pilotlog.txt
[2025-04-12 03:13:42] -rw------- 1 boinc boinc    424672 Apr 12 03:13 log.44075164._032075.job.log.1
[2025-04-12 03:13:42] -rw------- 1 boinc boinc       357 Apr 12 03:13 output.list
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc       620 Apr 12 03:13 runtime_log
[2025-04-12 03:13:42] -rw------- 1 boinc boinc    808960 Apr 12 03:13 result.tar.gz
[2025-04-12 03:13:42] -rw------- 1 boinc boinc       663 Apr 12 03:13 yoaLDmWQbN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmsMxKDmrddl2m.diag
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc     11078 Apr 12 03:13 runtime_log.err
[2025-04-12 03:13:42] -rw-r--r-- 1 boinc boinc     21320 Apr 12 03:13 stderr.txt
[2025-04-12 03:13:42] HITS file was successfully produced:
[2025-04-12 03:13:42] -rw------- 1 boinc boinc 201020614 Apr 12 03:12 shared/HITS.pool.root.1
[2025-04-12 03:13:42]  *** Contents of shared directory: ***
[2025-04-12 03:13:42] total 412068
[2025-04-12 03:13:42] -rw-r--r-- 2 boinc boinc 219578964 Apr 12 02:00 ATLAS.root_0
[2025-04-12 03:13:42] -rw-r--r-- 2 boinc boinc     17569 Apr 12 02:00 start_atlas.sh
[2025-04-12 03:13:42] -rw-r--r-- 2 boinc boinc    508885 Apr 12 02:00 input.tar.gz
[2025-04-12 03:13:42] -rw------- 1 boinc boinc 201020614 Apr 12 03:12 HITS.pool.root.1
[2025-04-12 03:13:42] -rw------- 1 boinc boinc    808960 Apr 12 03:13 result.tar.gz
03:13:44 (2604125): run_atlas exited; CPU time 39066.580647
03:13:44 (2604125): called boinc_finish(0)

</stderr_txt>
]]>

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