Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:51:01 (1836539): wrapper (7.7.26015): starting
08:51:01 (1836539): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 08:51:01] Arguments: --nthreads 12
[2025-04-12 08:51:01] Threads: 12
[2025-04-12 08:51:01] Checking for CVMFS
[2025-04-12 08:51:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 08:51:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 08:51:01] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 08:51:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 08:51:01] 2.12.6.0 4038419 1693 83808 144776 3 187 3770872 4096001 13416 130560 0 4357389 99.998 155281 803 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-12 08:51:01] CVMFS is ok
[2025-04-12 08:51:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 08:51:01] Checking for apptainer binary...
[2025-04-12 08:51:01] apptainer is not installed, using version from CVMFS
[2025-04-12 08:51:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 08:51:01] epyc7v12
[2025-04-12 08:51:01] apptainer works
[2025-04-12 08:51:01] Set ATHENA_PROC_NUMBER=12
[2025-04-12 08:51:01] Set ATHENA_CORE_NUMBER=12
[2025-04-12 08:51:01] Starting ATLAS job with PandaID=6600381073
[2025-04-12 08:51:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 11:11:45]  *** The last 200 lines of the pilot log: ***
[2025-04-12 11:11:45] 2025-04-12 11:11:29,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 11:11:45] 2025-04-12 11:11:29,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 11:11:45] 2025-04-12 11:11:29,240 | INFO     | fitting pss+swap vs Time
[2025-04-12 11:11:45] 2025-04-12 11:11:29,241 | INFO     | sum of square deviations: 797294163.5328447
[2025-04-12 11:11:45] 2025-04-12 11:11:29,241 | INFO     | sum of deviations: 69140605867.9124
[2025-04-12 11:11:45] 2025-04-12 11:11:29,242 | INFO     | mean x: 1744452048.0583942
[2025-04-12 11:11:45] 2025-04-12 11:11:29,242 | INFO     | mean y: 2507373.5109489053
[2025-04-12 11:11:45] 2025-04-12 11:11:29,242 | INFO     | -- intersect: -151274746401.73175
[2025-04-12 11:11:45] 2025-04-12 11:11:29,242 | INFO     | intersect: -151274746401.73175
[2025-04-12 11:11:45] 2025-04-12 11:11:29,242 | INFO     | chi2: 5.799210145195811
[2025-04-12 11:11:45] 2025-04-12 11:11:29,243 | INFO     | sum of square deviations: 713146188.5151502
[2025-04-12 11:11:45] 2025-04-12 11:11:29,243 | INFO     | sum of deviations: 76143117908.25755
[2025-04-12 11:11:45] 2025-04-12 11:11:29,244 | INFO     | mean x: 1744451895.560606
[2025-04-12 11:11:45] 2025-04-12 11:11:29,244 | INFO     | mean y: 2519521.2803030303
[2025-04-12 11:11:45] 2025-04-12 11:11:29,244 | INFO     | -- intersect: -186253830870.94055
[2025-04-12 11:11:45] 2025-04-12 11:11:29,244 | INFO     | intersect: -186253830870.94055
[2025-04-12 11:11:45] 2025-04-12 11:11:29,244 | INFO     | chi2: 4.970089218604144
[2025-04-12 11:11:45] 2025-04-12 11:11:29,244 | INFO     | current chi2=4.970089218604144 (change=14.297135400042857 %)
[2025-04-12 11:11:45] 2025-04-12 11:11:29,245 | INFO     | right removable region: 131
[2025-04-12 11:11:45] 2025-04-12 11:11:29,245 | INFO     | sum of square deviations: 713141308.5151502
[2025-04-12 11:11:45] 2025-04-12 11:11:29,246 | INFO     | sum of deviations: 31747218274.50003
[2025-04-12 11:11:45] 2025-04-12 11:11:29,246 | INFO     | mean x: 1744452200.560606
[2025-04-12 11:11:45] 2025-04-12 11:11:29,246 | INFO     | mean y: 2574934.75
[2025-04-12 11:11:45] 2025-04-12 11:11:29,246 | INFO     | -- intersect: -77655953773.874
[2025-04-12 11:11:45] 2025-04-12 11:11:29,246 | INFO     | intersect: -77655953773.874
[2025-04-12 11:11:45] 2025-04-12 11:11:29,246 | INFO     | chi2: 2.9304974529461676
[2025-04-12 11:11:45] 2025-04-12 11:11:29,246 | INFO     | current chi2=2.9304974529461676 (change=49.467300208566265 %)
[2025-04-12 11:11:45] 2025-04-12 11:11:29,247 | INFO     | sum of square deviations: 635128103.4960626
[2025-04-12 11:11:45] 2025-04-12 11:11:29,247 | INFO     | sum of deviations: 41030499.05512047
[2025-04-12 11:11:45] 2025-04-12 11:11:29,248 | INFO     | mean x: 1744452353.062992
[2025-04-12 11:11:45] 2025-04-12 11:11:29,248 | INFO     | mean y: 2636938.1181102362
[2025-04-12 11:11:45] 2025-04-12 11:11:29,248 | INFO     | -- intersect: -110058044.56343865
[2025-04-12 11:11:45] 2025-04-12 11:11:29,248 | INFO     | intersect: -110058044.56343865
[2025-04-12 11:11:45] 2025-04-12 11:11:29,248 | INFO     | chi2: 1.0230074189932055
[2025-04-12 11:11:45] 2025-04-12 11:11:29,248 | INFO     | current chi2=1.0230074189932055 (change=65.09099784527272 %)
[2025-04-12 11:11:45] 2025-04-12 11:11:29,248 | INFO     | sum of square deviations: 563021985.9754107
[2025-04-12 11:11:45] 2025-04-12 11:11:29,249 | INFO     | sum of deviations: -6094649788.139344
[2025-04-12 11:11:45] 2025-04-12 11:11:29,249 | INFO     | mean x: 1744452505.5655737
[2025-04-12 11:11:45] 2025-04-12 11:11:29,249 | INFO     | mean y: 2649643.204918033
[2025-04-12 11:11:45] 2025-04-12 11:11:29,249 | INFO     | -- intersect: 18886152167.613804
[2025-04-12 11:11:45] 2025-04-12 11:11:29,249 | INFO     | intersect: 18886152167.613804
[2025-04-12 11:11:45] 2025-04-12 11:11:29,250 | INFO     | chi2: 0.8792824328842952
[2025-04-12 11:11:45] 2025-04-12 11:11:29,250 | INFO     | current chi2=0.8792824328842952 (change=14.049261368051216 %)
[2025-04-12 11:11:45] 2025-04-12 11:11:29,250 | INFO     | left removable region: 30
[2025-04-12 11:11:45] 2025-04-12 11:11:29,250 | INFO     | sum of square deviations: 319446148.5148519
[2025-04-12 11:11:45] 2025-04-12 11:11:29,251 | INFO     | sum of deviations: 1365524504.8118808
[2025-04-12 11:11:45] 2025-04-12 11:11:29,251 | INFO     | mean x: 1744452780.0693069
[2025-04-12 11:11:45] 2025-04-12 11:11:29,251 | INFO     | mean y: 2673184.4554455443
[2025-04-12 11:11:45] 2025-04-12 11:11:29,251 | INFO     | -- intersect: -7454273877.65978
[2025-04-12 11:11:45] 2025-04-12 11:11:29,251 | INFO     | intersect: -7454273877.65978
[2025-04-12 11:11:45] 2025-04-12 11:11:29,251 | INFO     | chi2: 0.0001724128149511402
[2025-04-12 11:11:45] 2025-04-12 11:11:29,251 | INFO     | -- intersect: -7454273877.65978
[2025-04-12 11:11:45] 2025-04-12 11:11:29,251 | INFO     | current memory leak: 4.27 B/s (using 101 data points, chi2=0.00)
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | ..............................
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | . Timing measurements:
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | . get job = 0 s
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | . initial setup = 1 s
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | . payload setup = 6 s
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | . stage-in = 0 s
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | . payload execution = 8337 s
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | . stage-out = 2 s
[2025-04-12 11:11:45] 2025-04-12 11:11:29,252 | INFO     | . log creation = 0 s
[2025-04-12 11:11:45] 2025-04-12 11:11:29,253 | INFO     | ..............................
[2025-04-12 11:11:45] 2025-04-12 11:11:29,371 | INFO     | 
[2025-04-12 11:11:45] 2025-04-12 11:11:29,371 | INFO     | job summary report
[2025-04-12 11:11:45] 2025-04-12 11:11:29,371 | INFO     | --------------------------------------------------
[2025-04-12 11:11:45] 2025-04-12 11:11:29,371 | INFO     | PanDA job id: 6600381073
[2025-04-12 11:11:45] 2025-04-12 11:11:29,371 | INFO     | task id: 44075164
[2025-04-12 11:11:45] 2025-04-12 11:11:29,371 | INFO     | errors: (none)
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | pilot state: finished 
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | transexitcode: 0
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | exeerrorcode: 0
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | exeerrordiag: 
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | exitcode: 0
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | exitmsg: OK
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | cpuconsumptiontime: 44771 s
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | nevents: 400
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | neventsw: 0
[2025-04-12 11:11:45] 2025-04-12 11:11:29,372 | INFO     | pid: 1857508
[2025-04-12 11:11:45] 2025-04-12 11:11:29,373 | INFO     | pgrp: 1857508
[2025-04-12 11:11:45] 2025-04-12 11:11:29,373 | INFO     | corecount: 12
[2025-04-12 11:11:45] 2025-04-12 11:11:29,373 | INFO     | event service: False
[2025-04-12 11:11:45] 2025-04-12 11:11:29,373 | INFO     | sizes: {0: 2417181, 1: 2417380, 6: 2417586, 11: 2417614, 8348: 2445439, 8353: 2454428, 8355: 2454612, 8401: 2454782}
[2025-04-12 11:11:45] 2025-04-12 11:11:29,373 | INFO     | --------------------------------------------------
[2025-04-12 11:11:45] 2025-04-12 11:11:29,373 | INFO     | 
[2025-04-12 11:11:45] 2025-04-12 11:11:29,373 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/15
[2025-04-12 11:11:45] 2025-04-12 11:11:29,456 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,457 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,457 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,457 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,458 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,459 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 11:11:45] 2025-04-12 11:11:29,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,459 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 11:11:45] 2025-04-12 11:11:29,459 | INFO     | job 6600381073 has completed (purged errors)
[2025-04-12 11:11:45] 2025-04-12 11:11:29,459 | INFO     | overall cleanup function is called
[2025-04-12 11:11:45] 2025-04-12 11:11:30,474 | INFO     | --- collectZombieJob: --- 10, [1857508]
[2025-04-12 11:11:45] 2025-04-12 11:11:30,474 | INFO     | zombie collector waiting for pid 1857508
[2025-04-12 11:11:45] 2025-04-12 11:11:30,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 11:11:45] 2025-04-12 11:11:30,474 | INFO     | collected zombie processes
[2025-04-12 11:11:45] 2025-04-12 11:11:30,474 | INFO     | will attempt to kill all subprocesses of pid=1857508
[2025-04-12 11:11:45] 2025-04-12 11:11:31,611 | INFO     | PID=1840803 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-12 11:11:45] 2025-04-12 11:11:31,611 | INFO     | .. there are 19 such processes running
[2025-04-12 11:11:45] 2025-04-12 11:11:31,765 | INFO     | process IDs to be killed: [1857508] (in reverse order)
[2025-04-12 11:11:45] 2025-04-12 11:11:33,525 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 11:11:45] 2025-04-12 11:11:33,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 11:11:45] 2025-04-12 11:11:33,546 | INFO     | did not find any defunct processes belonging to 1857508
[2025-04-12 11:11:45] 2025-04-12 11:11:33,567 | INFO     | did not find any defunct processes belonging to 1857508
[2025-04-12 11:11:45] 2025-04-12 11:11:33,568 | INFO     | ready for new job
[2025-04-12 11:11:45] 2025-04-12 11:11:33,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 11:11:45] 2025-04-12 11:11:33,570 | INFO     | **************************************
[2025-04-12 11:11:45] 2025-04-12 11:11:33,570 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 11:11:45] 2025-04-12 11:11:33,570 | INFO     | **************************************
[2025-04-12 11:11:45] 2025-04-12 11:11:33,570 | INFO     | 
[2025-04-12 11:11:45] 2025-04-12 11:11:33,580 | INFO     | architecture information:
[2025-04-12 11:11:45] 2025-04-12 11:11:33,581 | INFO     | executing command: cat /etc/os-release
[2025-04-12 11:11:45] 2025-04-12 11:11:33,740 | INFO     | cat /etc/os-release:
[2025-04-12 11:11:45] NAME="CentOS Linux"
[2025-04-12 11:11:45] VERSION="7 (Core)"
[2025-04-12 11:11:45] ID="centos"
[2025-04-12 11:11:45] ID_LIKE="rhel fedora"
[2025-04-12 11:11:45] VERSION_ID="7"
[2025-04-12 11:11:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 11:11:45] ANSI_COLOR="0;31"
[2025-04-12 11:11:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 11:11:45] HOME_URL="https://www.centos.org/"
[2025-04-12 11:11:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 11:11:45] 
[2025-04-12 11:11:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 11:11:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 11:11:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 11:11:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 11:11:45] 
[2025-04-12 11:11:45] 2025-04-12 11:11:33,741 | INFO     | **************************************
[2025-04-12 11:11:45] 2025-04-12 11:11:34,243 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/15
[2025-04-12 11:11:45] 2025-04-12 11:11:34,451 | INFO     | sufficient remaining disk space (311505715200 B)
[2025-04-12 11:11:45] 2025-04-12 11:11:34,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 11:11:45] 2025-04-12 11:11:34,452 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 11:11:45] 2025-04-12 11:11:34,452 | INFO     | update_server=False
[2025-04-12 11:11:45] 2025-04-12 11:11:34,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 11:11:45] 2025-04-12 11:11:34,453 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 11:11:45] 2025-04-12 11:11:34,453 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 11:11:45] 2025-04-12 11:11:34,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 11:11:45] 2025-04-12 11:11:34,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 11:11:45] 2025-04-12 11:11:34,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 11:11:45] 2025-04-12 11:11:34,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 11:11:45] 2025-04-12 11:11:34,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 11:11:45] 2025-04-12 11:11:34,629 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-12 11:11:45] 2025-04-12 11:11:34,630 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-12 11:11:45] 2025-04-12 11:11:34,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 11:11:45] 2025-04-12 11:11:34,630 | INFO     | will abort loop
[2025-04-12 11:11:45] 2025-04-12 11:11:34,787 | INFO     | all payload control threads have been joined
[2025-04-12 11:11:45] 2025-04-12 11:11:34,889 | INFO     | all data control threads have been joined
[2025-04-12 11:11:45] 2025-04-12 11:11:35,455 | INFO     | [job] retrieve thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,463 | INFO     | [job] queue monitor thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,635 | INFO     | [job] job monitor thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,635 | INFO     | [data] copytool_in thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,699 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,707 | INFO     | [payload] validate_post thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,731 | INFO     | [payload] failed_post thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,791 | INFO     | [payload] control thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,897 | INFO     | all job control threads have been joined
[2025-04-12 11:11:45] 2025-04-12 11:11:35,899 | INFO     | [data] control thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:35,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:36,003 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:36,035 | INFO     | [job] validate thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:36,399 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:36,459 | INFO     | [data] copytool_out thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:36,903 | INFO     | [job] control thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:38,471 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 11:11:45] 2025-04-12 11:11:39,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760157374272)>', '<ExcThread(monitor, started 139759376660224)>']
[2025-04-12 11:11:45] 2025-04-12 11:11:39,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 11:11:45] 2025-04-12 11:11:39,472 | INFO     | [monitor] control thread has ended
[2025-04-12 11:11:45] 2025-04-12 11:11:44,443 | INFO     | all workflow threads have been joined
[2025-04-12 11:11:45] 2025-04-12 11:11:44,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 11:11:45] 2025-04-12 11:11:44,443 | INFO     | traces error code: 0
[2025-04-12 11:11:45] 2025-04-12 11:11:44,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 11:11:45] 2025-04-12 11:11:44,600 [wrapper] ==== pilot stdout END ====
[2025-04-12 11:11:45] 2025-04-12 11:11:44,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 11:11:45] 2025-04-12 11:11:44,617 [wrapper] pilotpid: 1840803
[2025-04-12 11:11:45] 2025-04-12 11:11:44,622 [wrapper] Pilot exit status: 0
[2025-04-12 11:11:45] 2025-04-12 11:11:44,651 [wrapper] pandaids: 6600381073
[2025-04-12 11:11:45] 2025-04-12 11:11:44,919 [wrapper] cleanup supervisor_pilot 2343993 1840804
[2025-04-12 11:11:45] 2025-04-12 11:11:44,948 [wrapper] Test setup, not cleaning
[2025-04-12 11:11:45] 2025-04-12 11:11:44,952 [wrapper] apfmon messages muted
[2025-04-12 11:11:45] 2025-04-12 11:11:44,955 [wrapper] ==== wrapper stdout END ====
[2025-04-12 11:11:45] 2025-04-12 11:11:45,008 [wrapper] ==== wrapper stderr END ====
[2025-04-12 11:11:45]  *** Error codes and diagnostics ***
[2025-04-12 11:11:45]     "exeErrorCode": 0,
[2025-04-12 11:11:45]     "exeErrorDiag": "",
[2025-04-12 11:11:45]     "pilotErrorCode": 0,
[2025-04-12 11:11:45]     "pilotErrorDiag": "",
[2025-04-12 11:11:45]  *** Listing of results directory ***
[2025-04-12 11:11:45] total 403844
[2025-04-12 11:11:45] -rw-r--r-- 1 boinc boinc    495897 Apr 11 21:44 pilot3.tar.gz
[2025-04-12 11:11:45] -rw-r--r-- 1 boinc boinc      5111 Apr 11 21:49 queuedata.json
[2025-04-12 11:11:45] -rwx------ 1 boinc boinc     37140 Apr 11 21:49 runpilot2-wrapper.sh
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc       100 Apr 12 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 11:11:45] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 08:51 run_atlas
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc       105 Apr 12 08:51 job.xml
[2025-04-12 11:11:45] -rw-r--r-- 2 boinc boinc     17569 Apr 12 08:51 start_atlas.sh
[2025-04-12 11:11:45] drwxrwx--x 2 boinc boinc      4096 Apr 12 08:51 shared
[2025-04-12 11:11:45] -rw-r--r-- 2 boinc boinc    508883 Apr 12 08:51 input.tar.gz
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc      6941 Apr 12 08:51 init_data.xml
[2025-04-12 11:11:45] -rw-r--r-- 2 boinc boinc 217281374 Apr 12 08:51 EVNT.44075162._001266.pool.root.1
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc         0 Apr 12 08:51 boinc_lockfile
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc      2551 Apr 12 08:51 pandaJob.out
[2025-04-12 11:11:45] -rw------- 1 boinc boinc       424 Apr 12 08:51 setup.sh.local
[2025-04-12 11:11:45] -rw------- 1 boinc boinc    986068 Apr 12 08:51 agis_schedconf.cvmfs.json
[2025-04-12 11:11:45] -rw------- 1 boinc boinc   1603529 Apr 12 08:51 agis_ddmendpoints.agis.ALL.json
[2025-04-12 11:11:45] drwx------ 4 boinc boinc      4096 Apr 12 08:51 pilot3
[2025-04-12 11:11:45] -rw------- 1 boinc boinc 190135801 Apr 12 11:09 HITS.44075164._032934.pool.root.1
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc       530 Apr 12 11:09 boinc_task_state.xml
[2025-04-12 11:11:45] -rw------- 1 boinc boinc      1025 Apr 12 11:10 memory_monitor_summary.json
[2025-04-12 11:11:45] -rw------- 1 boinc boinc    387848 Apr 12 11:10 log.44075164._032934.job.log.tgz.1
[2025-04-12 11:11:45] -rw------- 1 boinc boinc        95 Apr 12 11:10 pilot_heartbeat.json
[2025-04-12 11:11:45] -rw------- 1 boinc boinc      7647 Apr 12 11:11 heartbeat.json
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc      8192 Apr 12 11:11 boinc_mmap_file
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc        27 Apr 12 11:11 wrapper_checkpoint.txt
[2025-04-12 11:11:45] -rw------- 1 boinc boinc      4687 Apr 12 11:11 pilotlog.txt
[2025-04-12 11:11:45] -rw------- 1 boinc boinc    747351 Apr 12 11:11 log.44075164._032934.job.log.1
[2025-04-12 11:11:45] -rw------- 1 boinc boinc       357 Apr 12 11:11 output.list
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc       620 Apr 12 11:11 runtime_log
[2025-04-12 11:11:45] -rw------- 1 boinc boinc   1157120 Apr 12 11:11 result.tar.gz
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc     11427 Apr 12 11:11 runtime_log.err
[2025-04-12 11:11:45] -rw------- 1 boinc boinc       651 Apr 12 11:11 0bMLDmHRbN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmyRPLDmgIisVo.diag
[2025-04-12 11:11:45] -rw-rw-r-- 1 boinc boinc     20789 Apr 12 11:11 stderr.txt
[2025-04-12 11:11:45] HITS file was successfully produced:
[2025-04-12 11:11:45] -rw------- 1 boinc boinc 190135801 Apr 12 11:09 shared/HITS.pool.root.1
[2025-04-12 11:11:45]  *** Contents of shared directory: ***
[2025-04-12 11:11:45] total 399532
[2025-04-12 11:11:45] -rw-r--r-- 2 boinc boinc     17569 Apr 12 08:51 start_atlas.sh
[2025-04-12 11:11:45] -rw-r--r-- 2 boinc boinc    508883 Apr 12 08:51 input.tar.gz
[2025-04-12 11:11:45] -rw-r--r-- 2 boinc boinc 217281374 Apr 12 08:51 ATLAS.root_0
[2025-04-12 11:11:45] -rw------- 1 boinc boinc 190135801 Apr 12 11:09 HITS.pool.root.1
[2025-04-12 11:11:45] -rw------- 1 boinc boinc   1157120 Apr 12 11:11 result.tar.gz
11:11:47 (1836539): run_atlas exited; CPU time 45213.231042
11:11:47 (1836539): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN