Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:07:17 (3396661): wrapper (7.7.26015): starting
09:07:17 (3396661): wrapper: running run_atlas (--nthreads 4)
[2025-04-12 09:07:17] Arguments: --nthreads 4
[2025-04-12 09:07:17] Threads: 4
[2025-04-12 09:07:17] Checking for CVMFS
[2025-04-12 09:07:17] No cvmfs_config command found, will try listing directly
[2025-04-12 09:07:17] CVMFS is ok
[2025-04-12 09:07:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-12 09:07:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-12 09:07:17] Further information can be found at the LHC@home message board.
[2025-04-12 09:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 09:07:17] Checking for apptainer binary...
[2025-04-12 09:07:17] which: no apptainer in ((null))
[2025-04-12 09:07:17] apptainer is not installed, using version from CVMFS
[2025-04-12 09:07:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 09:07:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2025-04-12 09:07:17] apptainer works
[2025-04-12 09:07:17] Set ATHENA_PROC_NUMBER=4
[2025-04-12 09:07:17] Set ATHENA_CORE_NUMBER=4
[2025-04-12 09:07:17] Starting ATLAS job with PandaID=6600379097
[2025-04-12 09:07:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 12:45:03]  *** The last 200 lines of the pilot log: ***
[2025-04-12 12:45:03] 2025-04-12 10:44:33,551 | INFO     | -- intersect: -37826812230.15517
[2025-04-12 12:45:03] 2025-04-12 10:44:33,551 | INFO     | intersect: -37826812230.15517
[2025-04-12 12:45:03] 2025-04-12 10:44:33,551 | INFO     | chi2: 1.7072487364441244
[2025-04-12 12:45:03] 2025-04-12 10:44:33,551 | INFO     | current chi2=1.7072487364441244 (change=61.279374612417236 %)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,552 | INFO     | sum of square deviations: 2593916542.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,553 | INFO     | sum of deviations: 19482823122.999996
[2025-04-12 12:45:03] 2025-04-12 10:44:33,553 | INFO     | mean x: 1744448444.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,554 | INFO     | mean y: 2393141.748768473
[2025-04-12 12:45:03] 2025-04-12 10:44:33,554 | INFO     | -- intersect: -13100102613.739021
[2025-04-12 12:45:03] 2025-04-12 10:44:33,554 | INFO     | intersect: -13100102613.739021
[2025-04-12 12:45:03] 2025-04-12 10:44:33,554 | INFO     | chi2: 0.20831016396838298
[2025-04-12 12:45:03] 2025-04-12 10:44:33,554 | INFO     | current chi2=0.20831016396838298 (change=87.79848773517011 %)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,555 | INFO     | sum of square deviations: 2406926989.5
[2025-04-12 12:45:03] 2025-04-12 10:44:33,556 | INFO     | sum of deviations: 6820155111.499999
[2025-04-12 12:45:03] 2025-04-12 10:44:33,556 | INFO     | mean x: 1744448596.5
[2025-04-12 12:45:03] 2025-04-12 10:44:33,556 | INFO     | mean y: 2403373.095959596
[2025-04-12 12:45:03] 2025-04-12 10:44:33,557 | INFO     | -- intersect: -4940584122.607002
[2025-04-12 12:45:03] 2025-04-12 10:44:33,557 | INFO     | intersect: -4940584122.607002
[2025-04-12 12:45:03] 2025-04-12 10:44:33,557 | INFO     | chi2: 0.00399315252236216
[2025-04-12 12:45:03] 2025-04-12 10:44:33,557 | INFO     | current chi2=0.00399315252236216 (change=98.08307360222315 %)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,558 | INFO     | sum of square deviations: 2229146912.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,559 | INFO     | sum of deviations: 5212525457.000002
[2025-04-12 12:45:03] 2025-04-12 10:44:33,559 | INFO     | mean x: 1744448749.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,559 | INFO     | mean y: 2404749.134715026
[2025-04-12 12:45:03] 2025-04-12 10:44:33,559 | INFO     | -- intersect: -4076726807.266852
[2025-04-12 12:45:03] 2025-04-12 10:44:33,559 | INFO     | intersect: -4076726807.266852
[2025-04-12 12:45:03] 2025-04-12 10:44:33,560 | INFO     | chi2: 0.002633164371087755
[2025-04-12 12:45:03] 2025-04-12 10:44:33,560 | INFO     | current chi2=0.002633164371087755 (change=34.05800664157703 %)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,560 | INFO     | sum of square deviations: 2060343747.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,562 | INFO     | sum of deviations: 4049176004.5
[2025-04-12 12:45:03] 2025-04-12 10:44:33,562 | INFO     | mean x: 1744448901.5
[2025-04-12 12:45:03] 2025-04-12 10:44:33,562 | INFO     | mean y: 2405799.7074468085
[2025-04-12 12:45:03] 2025-04-12 10:44:33,562 | INFO     | -- intersect: -3425944757.482457
[2025-04-12 12:45:03] 2025-04-12 10:44:33,562 | INFO     | intersect: -3425944757.482457
[2025-04-12 12:45:03] 2025-04-12 10:44:33,563 | INFO     | chi2: 0.001970383399325907
[2025-04-12 12:45:03] 2025-04-12 10:44:33,563 | INFO     | current chi2=0.001970383399325907 (change=25.17051267437796 %)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,563 | INFO     | sum of square deviations: 1900284932.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,564 | INFO     | sum of deviations: 3147852540.000003
[2025-04-12 12:45:03] 2025-04-12 10:44:33,564 | INFO     | mean x: 1744449054.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,565 | INFO     | mean y: 2406657.3278688523
[2025-04-12 12:45:03] 2025-04-12 10:44:33,565 | INFO     | -- intersect: -2887301245.4523134
[2025-04-12 12:45:03] 2025-04-12 10:44:33,565 | INFO     | intersect: -2887301245.4523134
[2025-04-12 12:45:03] 2025-04-12 10:44:33,565 | INFO     | chi2: 0.0015544079802547828
[2025-04-12 12:45:03] 2025-04-12 10:44:33,565 | INFO     | current chi2=0.0015544079802547828 (change=21.111394828713774 %)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,565 | INFO     | left removable region: 60
[2025-04-12 12:45:03] 2025-04-12 10:44:33,566 | INFO     | sum of square deviations: 984941258.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,567 | INFO     | sum of deviations: 324580938.9999998
[2025-04-12 12:45:03] 2025-04-12 10:44:33,567 | INFO     | mean x: 1744449786.0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,567 | INFO     | mean y: 2409847.0204081633
[2025-04-12 12:45:03] 2025-04-12 10:44:33,567 | INFO     | -- intersect: -572462151.6691104
[2025-04-12 12:45:03] 2025-04-12 10:44:33,567 | INFO     | intersect: -572462151.6691104
[2025-04-12 12:45:03] 2025-04-12 10:44:33,567 | INFO     | chi2: 0.0003561516784030327
[2025-04-12 12:45:03] 2025-04-12 10:44:33,568 | INFO     | -- intersect: -572462151.6691104
[2025-04-12 12:45:03] 2025-04-12 10:44:33,568 | INFO     | current memory leak: 0.33 B/s (using 147 data points, chi2=0.00)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,568 | INFO     | ..............................
[2025-04-12 12:45:03] 2025-04-12 10:44:33,568 | INFO     | . Timing measurements:
[2025-04-12 12:45:03] 2025-04-12 10:44:33,569 | INFO     | . get job = 0 s
[2025-04-12 12:45:03] 2025-04-12 10:44:33,569 | INFO     | . initial setup = 1 s
[2025-04-12 12:45:03] 2025-04-12 10:44:33,569 | INFO     | . payload setup = 5 s
[2025-04-12 12:45:03] 2025-04-12 10:44:33,569 | INFO     | . stage-in = 0 s
[2025-04-12 12:45:03] 2025-04-12 10:44:33,569 | INFO     | . payload execution = 12992 s
[2025-04-12 12:45:03] 2025-04-12 10:44:33,569 | INFO     | . stage-out = 1 s
[2025-04-12 12:45:03] 2025-04-12 10:44:33,569 | INFO     | . log creation = 0 s
[2025-04-12 12:45:03] 2025-04-12 10:44:33,569 | INFO     | ..............................
[2025-04-12 12:45:03] 2025-04-12 10:44:33,739 | INFO     | 
[2025-04-12 12:45:03] 2025-04-12 10:44:33,739 | INFO     | job summary report
[2025-04-12 12:45:03] 2025-04-12 10:44:33,739 | INFO     | --------------------------------------------------
[2025-04-12 12:45:03] 2025-04-12 10:44:33,739 | INFO     | PanDA job id: 6600379097
[2025-04-12 12:45:03] 2025-04-12 10:44:33,739 | INFO     | task id: 44075164
[2025-04-12 12:45:03] 2025-04-12 10:44:33,739 | INFO     | errors: (none)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | pilot state: finished 
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | transexitcode: 0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | exeerrorcode: 0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | exeerrordiag: 
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | exitcode: 0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | exitmsg: OK
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | cpuconsumptiontime: 48007 s
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | nevents: 400
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | neventsw: 0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,740 | INFO     | pid: 3407074
[2025-04-12 12:45:03] 2025-04-12 10:44:33,741 | INFO     | pgrp: 3407074
[2025-04-12 12:45:03] 2025-04-12 10:44:33,741 | INFO     | corecount: 4
[2025-04-12 12:45:03] 2025-04-12 10:44:33,741 | INFO     | event service: False
[2025-04-12 12:45:03] 2025-04-12 10:44:33,741 | INFO     | sizes: {0: 2417168, 1: 2417367, 4: 2417573, 12: 2417601, 13001: 2447457, 13002: 2456420, 13004: 2456604, 13011: 2456774}
[2025-04-12 12:45:03] 2025-04-12 10:44:33,741 | INFO     | --------------------------------------------------
[2025-04-12 12:45:03] 2025-04-12 10:44:33,741 | INFO     | 
[2025-04-12 12:45:03] 2025-04-12 10:44:33,741 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-04-12 12:45:03] 2025-04-12 10:44:33,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 12:45:03] 2025-04-12 10:44:33,761 | INFO     | job 6600379097 has completed (purged errors)
[2025-04-12 12:45:03] 2025-04-12 10:44:33,761 | INFO     | overall cleanup function is called
[2025-04-12 12:45:03] 2025-04-12 10:44:34,769 | INFO     | --- collectZombieJob: --- 10, [3407074]
[2025-04-12 12:45:03] 2025-04-12 10:44:34,770 | INFO     | zombie collector waiting for pid 3407074
[2025-04-12 12:45:03] 2025-04-12 10:44:34,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 12:45:03] 2025-04-12 10:44:34,770 | INFO     | collected zombie processes
[2025-04-12 12:45:03] 2025-04-12 10:44:34,770 | INFO     | will attempt to kill all subprocesses of pid=3407074
[2025-04-12 12:45:03] 2025-04-12 10:44:35,023 | INFO     | process IDs to be killed: [3407074] (in reverse order)
[2025-04-12 12:45:03] 2025-04-12 10:44:35,095 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 12:45:03] 2025-04-12 10:44:35,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 12:45:03] 2025-04-12 10:44:35,104 | INFO     | did not find any defunct processes belonging to 3407074
[2025-04-12 12:45:03] 2025-04-12 10:44:35,113 | INFO     | did not find any defunct processes belonging to 3407074
[2025-04-12 12:45:03] 2025-04-12 10:44:35,113 | INFO     | ready for new job
[2025-04-12 12:45:03] 2025-04-12 10:44:35,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 12:45:03] 2025-04-12 10:44:35,115 | INFO     | **************************************
[2025-04-12 12:45:03] 2025-04-12 10:44:35,116 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 12:45:03] 2025-04-12 10:44:35,116 | INFO     | **************************************
[2025-04-12 12:45:03] 2025-04-12 10:44:35,116 | INFO     | 
[2025-04-12 12:45:03] 2025-04-12 10:44:35,118 | INFO     | architecture information:
[2025-04-12 12:45:03] 2025-04-12 10:44:35,119 | INFO     | executing command: cat /etc/os-release
[2025-04-12 12:45:03] 2025-04-12 10:44:35,131 | INFO     | cat /etc/os-release:
[2025-04-12 12:45:03] NAME="CentOS Linux"
[2025-04-12 12:45:03] VERSION="7 (Core)"
[2025-04-12 12:45:03] ID="centos"
[2025-04-12 12:45:03] ID_LIKE="rhel fedora"
[2025-04-12 12:45:03] VERSION_ID="7"
[2025-04-12 12:45:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 12:45:03] ANSI_COLOR="0;31"
[2025-04-12 12:45:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 12:45:03] HOME_URL="https://www.centos.org/"
[2025-04-12 12:45:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 12:45:03] 
[2025-04-12 12:45:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 12:45:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 12:45:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 12:45:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 12:45:03] 
[2025-04-12 12:45:03] 2025-04-12 10:44:35,131 | INFO     | **************************************
[2025-04-12 12:45:03] 2025-04-12 10:44:35,634 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-04-12 12:45:03] 2025-04-12 10:44:35,647 | INFO     | sufficient remaining disk space (1670358499328 B)
[2025-04-12 12:45:03] 2025-04-12 10:44:35,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 12:45:03] 2025-04-12 10:44:35,647 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 12:45:03] 2025-04-12 10:44:35,648 | INFO     | update_server=False
[2025-04-12 12:45:03] 2025-04-12 10:44:35,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 12:45:03] 2025-04-12 10:44:35,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 12:45:03] 2025-04-12 10:44:35,810 | INFO     | all job control threads have been joined
[2025-04-12 12:45:03] 2025-04-12 10:44:35,846 | INFO     | PID=3400287 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-12 12:45:03] 2025-04-12 10:44:35,846 | INFO     | .. there are 6 such processes running
[2025-04-12 12:45:03] 2025-04-12 10:44:35,846 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 12:45:03] 2025-04-12 10:44:35,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 12:45:03] 2025-04-12 10:44:35,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 12:45:03] 2025-04-12 10:44:35,944 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-12 12:45:03] 2025-04-12 10:44:35,945 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-12 12:45:03] 2025-04-12 10:44:35,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 12:45:03] 2025-04-12 10:44:35,945 | INFO     | will abort loop
[2025-04-12 12:45:03] 2025-04-12 10:44:35,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 12:45:03] 2025-04-12 10:44:36,037 | INFO     | all payload control threads have been joined
[2025-04-12 12:45:03] 2025-04-12 10:44:36,510 | INFO     | all data control threads have been joined
[2025-04-12 12:45:03] 2025-04-12 10:44:36,653 | INFO     | [job] retrieve thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:36,654 | INFO     | [job] queue monitor thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:36,776 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:36,815 | INFO     | [job] control thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:36,909 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:36,947 | INFO     | [job] job monitor thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:37,042 | INFO     | [payload] control thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:37,106 | INFO     | [payload] failed_post thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:37,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:37,380 | INFO     | [data] copytool_in thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:37,512 | INFO     | [data] control thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:37,661 | INFO     | [payload] validate_post thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:37,711 | INFO     | [job] validate thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:37,983 | INFO     | [data] copytool_out thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:38,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 12:45:03] 2025-04-12 10:44:38,133 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:42,048 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 12:45:03] 2025-04-12 10:44:43,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23144460916544)>', '<ExcThread(monitor, started 23144215561984)>']
[2025-04-12 12:45:03] 2025-04-12 10:44:43,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 12:45:03] 2025-04-12 10:44:43,886 | INFO     | [monitor] control thread has ended
[2025-04-12 12:45:03] 2025-04-12 10:44:48,717 | INFO     | all workflow threads have been joined
[2025-04-12 12:45:03] 2025-04-12 10:44:48,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 12:45:03] 2025-04-12 10:44:48,718 | INFO     | traces error code: 0
[2025-04-12 12:45:03] 2025-04-12 10:44:48,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 12:45:03] 2025-04-12 10:44:48,822 [wrapper] ==== pilot stdout END ====
[2025-04-12 12:45:03] 2025-04-12 10:44:48,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 12:45:03] 2025-04-12 10:44:48,827 [wrapper] pilotpid: 3400287
[2025-04-12 12:45:03] 2025-04-12 10:44:48,830 [wrapper] Pilot exit status: 0
[2025-04-12 12:45:03] 2025-04-12 10:44:48,839 [wrapper] pandaids: 6600379097
[2025-04-12 12:45:03] 2025-04-12 10:44:48,890 [wrapper] cleanup supervisor_pilot 3669893 3400288
[2025-04-12 12:45:03] 2025-04-12 10:44:48,893 [wrapper] Test setup, not cleaning
[2025-04-12 12:45:03] 2025-04-12 10:44:48,895 [wrapper] apfmon messages muted
[2025-04-12 12:45:03] 2025-04-12 10:44:48,898 [wrapper] ==== wrapper stdout END ====
[2025-04-12 12:45:03] 2025-04-12 10:44:48,901 [wrapper] ==== wrapper stderr END ====
[2025-04-12 12:45:03]  *** Error codes and diagnostics ***
[2025-04-12 12:45:03]     "exeErrorCode": 0,
[2025-04-12 12:45:03]     "exeErrorDiag": "",
[2025-04-12 12:45:03]     "pilotErrorCode": 0,
[2025-04-12 12:45:03]     "pilotErrorDiag": "",
[2025-04-12 12:45:03]  *** Listing of results directory ***
[2025-04-12 12:45:03] total 409532
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc    495897 Apr 11 23:44 pilot3.tar.gz
[2025-04-12 12:45:03] -rwx------ 1 boinc boinc     37140 Apr 11 23:48 runpilot2-wrapper.sh
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc      5111 Apr 11 23:48 queuedata.json
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc       100 Apr 12 09:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 12:45:03] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 09:07 run_atlas
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc       105 Apr 12 09:07 job.xml
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc      6422 Apr 12 09:07 init_data.xml
[2025-04-12 12:45:03] -rw-r--r-- 2 boinc boinc 219472613 Apr 12 09:07 EVNT.44075162._001222.pool.root.1
[2025-04-12 12:45:03] -rw-r--r-- 2 boinc boinc     17569 Apr 12 09:07 start_atlas.sh
[2025-04-12 12:45:03] drwxrwx--x 2 boinc boinc      4096 Apr 12 09:07 shared
[2025-04-12 12:45:03] -rw-r--r-- 2 boinc boinc    508885 Apr 12 09:07 input.tar.gz
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc         0 Apr 12 09:07 boinc_lockfile
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc      2551 Apr 12 09:07 pandaJob.out
[2025-04-12 12:45:03] -rw------- 1 boinc boinc       424 Apr 12 09:07 setup.sh.local
[2025-04-12 12:45:03] -rw------- 1 boinc boinc    986068 Apr 12 09:07 agis_schedconf.cvmfs.json
[2025-04-12 12:45:03] drwx------ 4 boinc boinc      4096 Apr 12 09:07 pilot3
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc       531 Apr 12 12:43 boinc_task_state.xml
[2025-04-12 12:45:03] -rw------- 1 boinc boinc 192905378 Apr 12 12:43 HITS.44075164._031847.pool.root.1
[2025-04-12 12:45:03] -rw------- 1 boinc boinc      1038 Apr 12 12:44 memory_monitor_summary.json
[2025-04-12 12:45:03] -rw------- 1 boinc boinc   1603529 Apr 12 12:44 agis_ddmendpoints.agis.ALL.json
[2025-04-12 12:45:03] -rw------- 1 boinc boinc    335452 Apr 12 12:44 log.44075164._031847.job.log.tgz.1
[2025-04-12 12:45:03] -rw------- 1 boinc boinc        95 Apr 12 12:44 pilot_heartbeat.json
[2025-04-12 12:45:03] -rw------- 1 boinc boinc      7731 Apr 12 12:44 heartbeat.json
[2025-04-12 12:45:03] -rw------- 1 boinc boinc      4945 Apr 12 12:44 pilotlog.txt
[2025-04-12 12:45:03] -rw------- 1 boinc boinc   1232689 Apr 12 12:44 log.44075164._031847.job.log.1
[2025-04-12 12:45:03] -rw------- 1 boinc boinc       357 Apr 12 12:44 output.list
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc       620 Apr 12 12:44 runtime_log
[2025-04-12 12:45:03] -rw------- 1 boinc boinc   1587200 Apr 12 12:44 result.tar.gz
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc     11424 Apr 12 12:44 runtime_log.err
[2025-04-12 12:45:03] -rw------- 1 boinc boinc       662 Apr 12 12:44 Qc0LDmaPbN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbLPLDmsLy7en.diag
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc        28 Apr 12 12:44 wrapper_checkpoint.txt
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc      8192 Apr 12 12:45 boinc_mmap_file
[2025-04-12 12:45:03] -rw-r--r-- 1 boinc boinc     20741 Apr 12 12:45 stderr.txt
[2025-04-12 12:45:03] HITS file was successfully produced:
[2025-04-12 12:45:03] -rw------- 1 boinc boinc 192905378 Apr 12 12:43 shared/HITS.pool.root.1
[2025-04-12 12:45:03]  *** Contents of shared directory: ***
[2025-04-12 12:45:03] total 404800
[2025-04-12 12:45:03] -rw-r--r-- 2 boinc boinc 219472613 Apr 12 09:07 ATLAS.root_0
[2025-04-12 12:45:03] -rw-r--r-- 2 boinc boinc     17569 Apr 12 09:07 start_atlas.sh
[2025-04-12 12:45:03] -rw-r--r-- 2 boinc boinc    508885 Apr 12 09:07 input.tar.gz
[2025-04-12 12:45:03] -rw------- 1 boinc boinc 192905378 Apr 12 12:43 HITS.pool.root.1
[2025-04-12 12:45:03] -rw------- 1 boinc boinc   1587200 Apr 12 12:44 result.tar.gz
12:45:05 (3396661): run_atlas exited; CPU time 48463.281645
12:45:05 (3396661): called boinc_finish(0)

</stderr_txt>
]]>

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