Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:11:13 (3878355): wrapper (7.7.26015): starting
17:11:13 (3878355): wrapper: running run_atlas (--nthreads 10)
[2025-04-11 17:11:13] Arguments: --nthreads 10
[2025-04-11 17:11:13] Threads: 10
[2025-04-11 17:11:13] Checking for CVMFS
[2025-04-11 17:11:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 17:11:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 17:11:15] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 17:11:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 17:11:16] 2.12.6.0 456607 14645 172168 144776 2 435 25805098 32935937 18338 16776704 0 62447236 99.600 71017756 24804 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-11 17:11:16] CVMFS is ok
[2025-04-11 17:11:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 17:11:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-11 17:11:16] Further information can be found at the LHC@home message board.
[2025-04-11 17:11:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 17:11:16] Checking for apptainer binary...
[2025-04-11 17:11:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 17:11:16] Running /usr/bin/apptainer --version
[2025-04-11 17:11:17] apptainer version 1.4.0-1.el9
[2025-04-11 17:11:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 17:11:18] c-8-37.aglt2.org
[2025-04-11 17:11:18] apptainer works
[2025-04-11 17:11:18] Set ATHENA_PROC_NUMBER=10
[2025-04-11 17:11:18] Set ATHENA_CORE_NUMBER=10
[2025-04-11 17:11:18] Starting ATLAS job with PandaID=6600289366
[2025-04-11 17:11:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 13:26:06]  *** The last 200 lines of the pilot log: ***
[2025-04-12 13:26:06] 2025-04-12 17:25:33,951 | INFO     | monitor loop #3758: job 0:6600289366 is in state 'finished'
[2025-04-12 13:26:06] 2025-04-12 17:25:33,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 13:26:06] 2025-04-12 17:25:36,454 | INFO     | monitor loop #3759: job 0:6600289366 is in state 'finished'
[2025-04-12 13:26:06] 2025-04-12 17:25:36,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 13:26:06] 2025-04-12 17:25:38,959 | INFO     | monitor loop #3760: job 0:6600289366 is in state 'finished'
[2025-04-12 13:26:06] 2025-04-12 17:25:38,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 13:26:06] 2025-04-12 17:25:41,176 | INFO     | PID=3888820 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-12 13:26:06] 2025-04-12 17:25:41,176 | INFO     | .. there are 41 such processes running
[2025-04-12 13:26:06] 2025-04-12 17:25:41,501 | INFO     | monitor loop #3761: job 0:6600289366 is in state 'finished'
[2025-04-12 13:26:06] 2025-04-12 17:25:41,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 13:26:06] 2025-04-12 17:25:44,013 | INFO     | monitor loop #3762: job 0:6600289366 is in state 'finished'
[2025-04-12 13:26:06] 2025-04-12 17:25:44,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 13:26:06] 2025-04-12 17:25:46,524 | INFO     | monitor loop #3763: job 0:6600289366 is in state 'finished'
[2025-04-12 13:26:06] 2025-04-12 17:25:46,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 13:26:06] 2025-04-12 17:25:48,412 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-12 13:26:06] 2025-04-12 17:25:48,435 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6600289366/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 13:26:06] 2025-04-12 17:25:48,437 | INFO     | extracted standard info from prmon json
[2025-04-12 13:26:06] 2025-04-12 17:25:48,437 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 13:26:06] 2025-04-12 17:25:48,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 13:26:06] 2025-04-12 17:25:48,446 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 13:26:06] 2025-04-12 17:25:48,446 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 13:26:06] 2025-04-12 17:25:48,667 | INFO     | fitting pss+swap vs Time
[2025-04-12 13:26:06] 2025-04-12 17:25:48,724 | INFO     | sum of square deviations: 521223826699.04095
[2025-04-12 13:26:06] 2025-04-12 17:25:49,065 | INFO     | sum of deviations: 2482212525767.0684
[2025-04-12 13:26:06] 2025-04-12 17:25:49,066 | INFO     | mean x: 1744442406.8805718
[2025-04-12 13:26:06] 2025-04-12 17:25:49,066 | INFO     | mean y: 2369156.007569386
[2025-04-12 13:26:06] 2025-04-12 17:25:49,066 | INFO     | -- intersect: -8305149746.689163
[2025-04-12 13:26:06] 2025-04-12 17:25:49,066 | INFO     | intersect: -8305149746.689163
[2025-04-12 13:26:06] 2025-04-12 17:25:49,068 | INFO     | chi2: 20.316572812924953
[2025-04-12 13:26:06] 2025-04-12 17:25:49,070 | INFO     | sum of square deviations: 514676190700.1477
[2025-04-12 13:26:06] 2025-04-12 17:25:49,101 | INFO     | monitor loop #3764: job 0:6600289366 is in state 'finished'
[2025-04-12 13:26:06] 2025-04-12 17:25:49,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 13:26:06] 2025-04-12 17:25:49,125 | INFO     | sum of deviations: 2860971936719.5566
[2025-04-12 13:26:06] 2025-04-12 17:25:49,125 | INFO     | mean x: 1744442254.3842905
[2025-04-12 13:26:06] 2025-04-12 17:25:49,125 | INFO     | mean y: 2377977.4493243243
[2025-04-12 13:26:06] 2025-04-12 17:25:49,125 | INFO     | -- intersect: -9694593487.719757
[2025-04-12 13:26:06] 2025-04-12 17:25:49,126 | INFO     | intersect: -9694593487.719757
[2025-04-12 13:26:06] 2025-04-12 17:25:49,127 | INFO     | chi2: 16.41252947858057
[2025-04-12 13:26:06] 2025-04-12 17:25:49,127 | INFO     | current chi2=16.41252947858057 (change=19.21605267922313 %)
[2025-04-12 13:26:06] 2025-04-12 17:25:49,127 | INFO     | right removable region: 1183
[2025-04-12 13:26:06] 2025-04-12 17:25:49,129 | INFO     | sum of square deviations: 514675624559.9158
[2025-04-12 13:26:06] 2025-04-12 17:25:49,168 | INFO     | sum of deviations: 2103137609853.9724
[2025-04-12 13:26:06] 2025-04-12 17:25:49,169 | INFO     | mean x: 1744442559.383446
[2025-04-12 13:26:06] 2025-04-12 17:25:49,169 | INFO     | mean y: 2377982.4780405406
[2025-04-12 13:26:06] 2025-04-12 17:25:49,169 | INFO     | -- intersect: -7126000708.481598
[2025-04-12 13:26:06] 2025-04-12 17:25:49,169 | INFO     | intersect: -7126000708.481598
[2025-04-12 13:26:06] 2025-04-12 17:25:49,171 | INFO     | chi2: 16.216969002771155
[2025-04-12 13:26:06] 2025-04-12 17:25:49,171 | INFO     | current chi2=16.216969002771155 (change=20.178618942786066 %)
[2025-04-12 13:26:06] 2025-04-12 17:25:49,171 | INFO     | left removable region: 10
[2025-04-12 13:26:06] 2025-04-12 17:25:49,173 | INFO     | sum of square deviations: 500463780259.5929
[2025-04-12 13:26:06] 2025-04-12 17:25:49,210 | INFO     | sum of deviations: 2190278650610.3103
[2025-04-12 13:26:06] 2025-04-12 17:25:49,210 | INFO     | mean x: 1744442528.889173
[2025-04-12 13:26:06] 2025-04-12 17:25:49,210 | INFO     | mean y: 2393779.3947144076
[2025-04-12 13:26:06] 2025-04-12 17:25:49,211 | INFO     | -- intersect: -7632155170.90243
[2025-04-12 13:26:06] 2025-04-12 17:25:49,211 | INFO     | intersect: -7632155170.90243
[2025-04-12 13:26:06] 2025-04-12 17:25:49,212 | INFO     | chi2: 9.954239251550213
[2025-04-12 13:26:06] 2025-04-12 17:25:49,213 | INFO     | -- intersect: -7632155170.90243
[2025-04-12 13:26:06] 2025-04-12 17:25:49,213 | INFO     | current memory leak: 4.38 B/s (using 1173 data points, chi2=9.95)
[2025-04-12 13:26:06] 2025-04-12 17:25:49,214 | INFO     | ..............................
[2025-04-12 13:26:06] 2025-04-12 17:25:49,214 | INFO     | . Timing measurements:
[2025-04-12 13:26:06] 2025-04-12 17:25:49,215 | INFO     | . get job = 1 s
[2025-04-12 13:26:06] 2025-04-12 17:25:49,215 | INFO     | . initial setup = 6 s
[2025-04-12 13:26:06] 2025-04-12 17:25:49,215 | INFO     | . payload setup = 60 s
[2025-04-12 13:26:06] 2025-04-12 17:25:49,215 | INFO     | . stage-in = 0 s
[2025-04-12 13:26:06] 2025-04-12 17:25:49,215 | INFO     | . payload execution = 72575 s
[2025-04-12 13:26:06] 2025-04-12 17:25:49,215 | INFO     | . stage-out = 6 s
[2025-04-12 13:26:06] 2025-04-12 17:25:49,215 | INFO     | . log creation = 1 s
[2025-04-12 13:26:06] 2025-04-12 17:25:49,215 | INFO     | ..............................
[2025-04-12 13:26:06] 2025-04-12 17:25:49,427 | INFO     | 
[2025-04-12 13:26:06] 2025-04-12 17:25:49,427 | INFO     | job summary report
[2025-04-12 13:26:06] 2025-04-12 17:25:49,427 | INFO     | --------------------------------------------------
[2025-04-12 13:26:06] 2025-04-12 17:25:49,427 | INFO     | PanDA job id: 6600289366
[2025-04-12 13:26:06] 2025-04-12 17:25:49,427 | INFO     | task id: 44075164
[2025-04-12 13:26:06] 2025-04-12 17:25:49,427 | INFO     | errors: (none)
[2025-04-12 13:26:06] 2025-04-12 17:25:49,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 13:26:06] 2025-04-12 17:25:49,428 | INFO     | pilot state: finished 
[2025-04-12 13:26:06] 2025-04-12 17:25:49,428 | INFO     | transexitcode: 0
[2025-04-12 13:26:06] 2025-04-12 17:25:49,428 | INFO     | exeerrorcode: 0
[2025-04-12 13:26:06] 2025-04-12 17:25:49,428 | INFO     | exeerrordiag: 
[2025-04-12 13:26:06] 2025-04-12 17:25:49,428 | INFO     | exitcode: 0
[2025-04-12 13:26:06] 2025-04-12 17:25:49,437 | INFO     | exitmsg: OK
[2025-04-12 13:26:06] 2025-04-12 17:25:49,437 | INFO     | cpuconsumptiontime: 53131 s
[2025-04-12 13:26:06] 2025-04-12 17:25:49,437 | INFO     | nevents: 400
[2025-04-12 13:26:06] 2025-04-12 17:25:49,438 | INFO     | neventsw: 0
[2025-04-12 13:26:06] 2025-04-12 17:25:49,438 | INFO     | pid: 3914563
[2025-04-12 13:26:06] 2025-04-12 17:25:49,438 | INFO     | pgrp: 3914563
[2025-04-12 13:26:06] 2025-04-12 17:25:49,438 | INFO     | corecount: 10
[2025-04-12 13:26:06] 2025-04-12 17:25:49,457 | INFO     | event service: False
[2025-04-12 13:26:06] 2025-04-12 17:25:49,457 | INFO     | sizes: {0: 2416446, 1: 2417131, 2: 2417159, 3: 2417330, 4: 2417358, 15: 2417386, 26: 2417542, 37: 2417570, 43: 2417804, 49: 2417832, 72640: 2472407, 72641: 2472686
[2025-04-12 13:26:06] 2025-04-12 17:25:49,457 | INFO     | --------------------------------------------------
[2025-04-12 13:26:06] 2025-04-12 17:25:49,457 | INFO     | 
[2025-04-12 13:26:06] 2025-04-12 17:25:49,457 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-12 13:26:06] 2025-04-12 17:25:49,511 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,512 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,514 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 13:26:06] 2025-04-12 17:25:49,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 13:26:06] 2025-04-12 17:25:49,514 | INFO     | job 6600289366 has completed (purged errors)
[2025-04-12 13:26:06] 2025-04-12 17:25:49,514 | INFO     | overall cleanup function is called
[2025-04-12 13:26:06] 2025-04-12 17:25:50,524 | INFO     | --- collectZombieJob: --- 10, [3914563]
[2025-04-12 13:26:06] 2025-04-12 17:25:50,524 | INFO     | zombie collector waiting for pid 3914563
[2025-04-12 13:26:06] 2025-04-12 17:25:50,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 13:26:06] 2025-04-12 17:25:50,524 | INFO     | collected zombie processes
[2025-04-12 13:26:06] 2025-04-12 17:25:50,524 | INFO     | will attempt to kill all subprocesses of pid=3914563
[2025-04-12 13:26:06] 2025-04-12 17:25:51,234 | INFO     | process IDs to be killed: [3914563] (in reverse order)
[2025-04-12 13:26:06] 2025-04-12 17:25:51,382 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 13:26:06] 2025-04-12 17:25:51,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 13:26:06] 2025-04-12 17:25:51,429 | INFO     | did not find any defunct processes belonging to 3914563
[2025-04-12 13:26:06] 2025-04-12 17:25:51,559 | INFO     | did not find any defunct processes belonging to 3914563
[2025-04-12 13:26:06] 2025-04-12 17:25:51,560 | INFO     | ready for new job
[2025-04-12 13:26:06] 2025-04-12 17:25:51,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 13:26:06] 2025-04-12 17:25:51,583 | INFO     | **************************************
[2025-04-12 13:26:06] 2025-04-12 17:25:51,584 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 13:26:06] 2025-04-12 17:25:51,584 | INFO     | **************************************
[2025-04-12 13:26:06] 2025-04-12 17:25:51,584 | INFO     | 
[2025-04-12 13:26:06] 2025-04-12 17:25:51,604 | INFO     | architecture information:
[2025-04-12 13:26:06] 2025-04-12 17:25:51,612 | INFO     | executing command: cat /etc/os-release
[2025-04-12 13:26:06] 2025-04-12 17:25:51,711 | INFO     | cat /etc/os-release:
[2025-04-12 13:26:06] NAME="CentOS Linux"
[2025-04-12 13:26:06] VERSION="7 (Core)"
[2025-04-12 13:26:06] ID="centos"
[2025-04-12 13:26:06] ID_LIKE="rhel fedora"
[2025-04-12 13:26:06] VERSION_ID="7"
[2025-04-12 13:26:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 13:26:06] ANSI_COLOR="0;31"
[2025-04-12 13:26:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 13:26:06] HOME_URL="https://www.centos.org/"
[2025-04-12 13:26:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 13:26:06] 
[2025-04-12 13:26:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 13:26:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 13:26:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 13:26:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 13:26:06] 
[2025-04-12 13:26:06] 2025-04-12 17:25:51,711 | INFO     | **************************************
[2025-04-12 13:26:06] 2025-04-12 17:25:52,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-12 13:26:06] 2025-04-12 17:25:52,367 | INFO     | sufficient remaining disk space (74058825728 B)
[2025-04-12 13:26:06] 2025-04-12 17:25:52,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 13:26:06] 2025-04-12 17:25:52,368 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 13:26:06] 2025-04-12 17:25:52,368 | INFO     | update_server=False
[2025-04-12 13:26:06] 2025-04-12 17:25:52,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 13:26:06] 2025-04-12 17:25:52,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 13:26:06] 2025-04-12 17:25:52,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 13:26:06] 2025-04-12 17:25:52,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 13:26:06] 2025-04-12 17:25:52,612 | INFO     | aborting loop
[2025-04-12 13:26:06] 2025-04-12 17:25:52,784 | INFO     | all payload control threads have been joined
[2025-04-12 13:26:06] 2025-04-12 17:25:53,287 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 13:26:06] 2025-04-12 17:25:53,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 13:26:06] 2025-04-12 17:25:53,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 13:26:06] 2025-04-12 17:25:53,298 | INFO     | all data control threads have been joined
[2025-04-12 13:26:06] 2025-04-12 17:25:53,373 | INFO     | [job] retrieve thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:53,386 | INFO     | [payload] validate_post thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:53,393 | INFO     | [payload] failed_post thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:53,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:53,617 | INFO     | [job] job monitor thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:53,748 | INFO     | all job control threads have been joined
[2025-04-12 13:26:06] 2025-04-12 17:25:53,789 | INFO     | [payload] control thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:53,876 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:54,009 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:54,304 | INFO     | [data] control thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:54,318 | INFO     | [job] validate thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:54,386 | INFO     | [data] copytool_out thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:54,395 | INFO     | [data] copytool_in thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:54,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 13:26:06] 2025-04-12 17:25:54,499 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:54,754 | INFO     | [job] control thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:55,459 | INFO     | [job] queue monitor thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:56,514 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 13:26:06] 2025-04-12 17:25:57,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461960734528)>', '<ExcThread(monitor, started 140461335377664)>']
[2025-04-12 13:26:06] 2025-04-12 17:25:58,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 13:26:06] 2025-04-12 17:25:58,344 | INFO     | [monitor] control thread has ended
[2025-04-12 13:26:06] 2025-04-12 17:26:02,563 | INFO     | all workflow threads have been joined
[2025-04-12 13:26:06] 2025-04-12 17:26:02,563 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 13:26:06] 2025-04-12 17:26:02,564 | INFO     | traces error code: 0
[2025-04-12 13:26:06] 2025-04-12 17:26:02,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 13:26:06] 2025-04-12 17:26:03,749 [wrapper] ==== pilot stdout END ====
[2025-04-12 13:26:06] 2025-04-12 17:26:03,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 13:26:06] 2025-04-12 17:26:03,783 [wrapper] pilotpid: 3888820
[2025-04-12 13:26:06] 2025-04-12 17:26:03,823 [wrapper] Pilot exit status: 0
[2025-04-12 13:26:06] 2025-04-12 17:26:04,022 [wrapper] pandaids: 6600289366
[2025-04-12 13:26:06] 2025-04-12 17:26:04,860 [wrapper] cleanup supervisor_pilot 3101565 3888821
[2025-04-12 13:26:06] 2025-04-12 17:26:04,905 [wrapper] Test setup, not cleaning
[2025-04-12 13:26:06] 2025-04-12 17:26:04,976 [wrapper] apfmon messages muted
[2025-04-12 13:26:06] 2025-04-12 17:26:05,019 [wrapper] ==== wrapper stdout END ====
[2025-04-12 13:26:06] 2025-04-12 17:26:05,052 [wrapper] ==== wrapper stderr END ====
[2025-04-12 13:26:06]  *** Error codes and diagnostics ***
[2025-04-12 13:26:06]     "exeErrorCode": 0,
[2025-04-12 13:26:06]     "exeErrorDiag": "",
[2025-04-12 13:26:06]     "pilotErrorCode": 0,
[2025-04-12 13:26:06]     "pilotErrorDiag": "",
[2025-04-12 13:26:06]  *** Listing of results directory ***
[2025-04-12 13:26:06] total 418128
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas    495897 Apr 11 16:03 pilot3.tar.gz
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas      5111 Apr 11 16:06 queuedata.json
[2025-04-12 13:26:06] -rwx------. 1 boincer umatlas     37140 Apr 11 16:06 runpilot2-wrapper.sh
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas       100 Apr 11 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 13:26:06] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 11 17:11 run_atlas
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas       105 Apr 11 17:11 job.xml
[2025-04-12 13:26:06] -rw-r--r--. 2 boincer umatlas 219526752 Apr 11 17:11 EVNT.44075162._000618.pool.root.1
[2025-04-12 13:26:06] -rw-r--r--. 2 boincer umatlas    508888 Apr 11 17:11 input.tar.gz
[2025-04-12 13:26:06] -rw-r--r--. 2 boincer umatlas     17569 Apr 11 17:11 start_atlas.sh
[2025-04-12 13:26:06] drwxrwx--x. 2 boincer umatlas      4096 Apr 11 17:11 shared
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas         0 Apr 11 17:11 boinc_lockfile
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas      2549 Apr 11 17:11 pandaJob.out
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas       467 Apr 11 17:11 setup.sh.local
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas    986068 Apr 11 17:12 agis_schedconf.cvmfs.json
[2025-04-12 13:26:06] drwx------. 4 boincer umatlas      4096 Apr 11 17:12 pilot3
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas 192756651 Apr 12 13:19 HITS.44075164._030654.pool.root.1
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas       531 Apr 12 13:19 boinc_task_state.xml
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas      6675 Apr 12 13:21 init_data.xml
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas      1052 Apr 12 13:24 memory_monitor_summary.json
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas   1603529 Apr 12 13:25 agis_ddmendpoints.agis.ALL.json
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas    863123 Apr 12 13:25 log.44075164._030654.job.log.tgz.1
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas        95 Apr 12 13:25 pilot_heartbeat.json
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas      7742 Apr 12 13:25 heartbeat.json
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas      4353 Apr 12 13:26 pilotlog.txt
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas      8192 Apr 12 13:26 boinc_mmap_file
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas        28 Apr 12 13:26 wrapper_checkpoint.txt
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas   5155951 Apr 12 13:26 log.44075164._030654.job.log.1
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas       357 Apr 12 13:26 output.list
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas       620 Apr 12 13:26 runtime_log
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas   6041600 Apr 12 13:26 result.tar.gz
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas       657 Apr 12 13:26 sFHMDmKpZN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmy7OLDmVmHEOo.diag
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas     11411 Apr 12 13:26 runtime_log.err
[2025-04-12 13:26:06] -rw-r--r--. 1 boincer umatlas     21559 Apr 12 13:26 stderr.txt
[2025-04-12 13:26:06] HITS file was successfully produced:
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas 192756651 Apr 12 13:19 shared/HITS.pool.root.1
[2025-04-12 13:26:06]  *** Contents of shared directory: ***
[2025-04-12 13:26:06] total 409048
[2025-04-12 13:26:06] -rw-r--r--. 2 boincer umatlas 219526752 Apr 11 17:11 ATLAS.root_0
[2025-04-12 13:26:06] -rw-r--r--. 2 boincer umatlas    508888 Apr 11 17:11 input.tar.gz
[2025-04-12 13:26:06] -rw-r--r--. 2 boincer umatlas     17569 Apr 11 17:11 start_atlas.sh
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas 192756651 Apr 12 13:19 HITS.pool.root.1
[2025-04-12 13:26:06] -rw-------. 1 boincer umatlas   6041600 Apr 12 13:26 result.tar.gz
13:26:08 (3878355): run_atlas exited; CPU time 56630.915801
13:26:08 (3878355): called boinc_finish(0)

</stderr_txt>
]]>

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