Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:01:44 (963827): wrapper (7.7.26015): starting
05:01:44 (963827): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 05:01:44] Arguments: --nthreads 12
[2025-04-12 05:01:44] Threads: 12
[2025-04-12 05:01:44] Checking for CVMFS
[2025-04-12 05:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 05:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 05:01:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 05:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 05:01:45] 2.12.6.0 4038419 1464 53244 144776 0 187 3683997 4096001 912 130560 0 2520660 99.997 155247 886 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-12 05:01:45] CVMFS is ok
[2025-04-12 05:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 05:01:45] Checking for apptainer binary...
[2025-04-12 05:01:45] apptainer is not installed, using version from CVMFS
[2025-04-12 05:01:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 05:01:46] epyc7v12
[2025-04-12 05:01:46] apptainer works
[2025-04-12 05:01:46] Set ATHENA_PROC_NUMBER=12
[2025-04-12 05:01:46] Set ATHENA_CORE_NUMBER=12
[2025-04-12 05:01:46] Starting ATLAS job with PandaID=6600290179
[2025-04-12 05:01:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 06:17:14]  *** The last 200 lines of the pilot log: ***
[2025-04-12 06:17:14]  status=None
[2025-04-12 06:17:14]  status_code=0
[2025-04-12 06:17:14]  storage_token=
[2025-04-12 06:17:14]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6600290179/log.44075164._030915.job.log.tgz.1
[2025-04-12 06:17:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/f9/log.44075164._030915.job.log.tgz.1
[2025-04-12 06:17:14]  workdir=None
[2025-04-12 06:17:14] ]
[2025-04-12 06:17:14] 2025-04-12 06:16:36,740 | INFO     | transferring file log.44075164._030915.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6600290179/log.44075164._030915.job.log.tgz.1 t
[2025-04-12 06:17:14] 2025-04-12 06:16:36,740 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6600290179/log.44075164._030915.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-12 06:17:14] 2025-04-12 06:16:36,771 | INFO     | adding to output.list: log.44075164._030915.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/f9/log.44075164._030915.job.log.tg
[2025-04-12 06:17:14] 2025-04-12 06:16:36,772 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-12 06:17:14] 2025-04-12 06:16:36,772 | INFO     | summary of transferred files:
[2025-04-12 06:17:14] 2025-04-12 06:16:36,772 | INFO     |  -- lfn=log.44075164._030915.job.log.tgz.1, status_code=0, status=transferred
[2025-04-12 06:17:14] 2025-04-12 06:16:36,773 | INFO     | stage-out finished correctly
[2025-04-12 06:17:14] 2025-04-12 06:16:38,973 | INFO     | monitor loop #304: job 0:6600290179 is in state 'finished'
[2025-04-12 06:17:14] 2025-04-12 06:16:38,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 06:17:14] 2025-04-12 06:16:40,190 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-12 06:17:14] 2025-04-12 06:16:41,475 | INFO     | monitor loop #305: job 0:6600290179 is in state 'finished'
[2025-04-12 06:17:14] 2025-04-12 06:16:41,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 06:17:14] 2025-04-12 06:16:42,359 | INFO     | job 6600290179 has state=finished
[2025-04-12 06:17:14] 2025-04-12 06:16:42,359 | INFO     | preparing for final server update for job 6600290179 in state='finished'
[2025-04-12 06:17:14] 2025-04-12 06:16:42,360 | INFO     | this job has now completed (state=finished)
[2025-04-12 06:17:14] 2025-04-12 06:16:42,360 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-12 06:17:14] 2025-04-12 06:16:42,360 | INFO     | log transfer has been attempted: DONE
[2025-04-12 06:17:14] 2025-04-12 06:16:42,360 | INFO     | job 6600290179 has finished - writing final server update
[2025-04-12 06:17:14] 2025-04-12 06:16:42,360 | INFO     | total number of processed events: 400 (read)
[2025-04-12 06:17:14] 2025-04-12 06:16:42,399 | INFO     | executing command: lscpu
[2025-04-12 06:17:14] 2025-04-12 06:16:42,515 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-12 06:17:14] 2025-04-12 06:16:43,267 | INFO     | 4483s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-12 06:17:14] 2025-04-12 06:16:43,982 | INFO     | monitor loop #306: job 0:6600290179 is in state 'finished'
[2025-04-12 06:17:14] 2025-04-12 06:16:43,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 06:17:14] 2025-04-12 06:16:46,483 | INFO     | monitor loop #307: job 0:6600290179 is in state 'finished'
[2025-04-12 06:17:14] 2025-04-12 06:16:46,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 06:17:14] 2025-04-12 06:16:48,986 | INFO     | monitor loop #308: job 0:6600290179 is in state 'finished'
[2025-04-12 06:17:14] 2025-04-12 06:16:48,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 06:17:14] 2025-04-12 06:16:51,489 | INFO     | monitor loop #309: job 0:6600290179 is in state 'finished'
[2025-04-12 06:17:14] 2025-04-12 06:16:51,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 06:17:14] 2025-04-12 06:16:53,719 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-12 06:17:14] 2025-04-12 06:16:53,719 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6600290179/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 06:17:14] 2025-04-12 06:16:53,720 | INFO     | extracted standard info from prmon json
[2025-04-12 06:17:14] 2025-04-12 06:16:53,720 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 06:17:14] 2025-04-12 06:16:53,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 06:17:14] 2025-04-12 06:16:53,721 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 06:17:14] 2025-04-12 06:16:53,721 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 06:17:14] 2025-04-12 06:16:53,725 | INFO     | fitting pss+swap vs Time
[2025-04-12 06:17:14] 2025-04-12 06:16:53,726 | INFO     | sum of square deviations: 89127252.5
[2025-04-12 06:17:14] 2025-04-12 06:16:53,726 | INFO     | sum of deviations: 19806614081.5
[2025-04-12 06:17:14] 2025-04-12 06:16:53,726 | INFO     | mean x: 1744436444.5
[2025-04-12 06:17:14] 2025-04-12 06:16:53,726 | INFO     | mean y: 2751152.9545454546
[2025-04-12 06:17:14] 2025-04-12 06:16:53,727 | INFO     | -- intersect: -387660712902.728
[2025-04-12 06:17:14] 2025-04-12 06:16:53,727 | INFO     | intersect: -387660712902.728
[2025-04-12 06:17:14] 2025-04-12 06:16:53,727 | INFO     | chi2: 1.3924808835930502
[2025-04-12 06:17:14] 2025-04-12 06:16:53,727 | INFO     | -- intersect: -387660712902.728
[2025-04-12 06:17:14] 2025-04-12 06:16:53,727 | INFO     | current memory leak: 222.23 B/s (using 66 data points, chi2=1.39)
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | ..............................
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | . Timing measurements:
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | . get job = 0 s
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | . initial setup = 1 s
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | . payload setup = 9 s
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | . stage-in = 0 s
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | . payload execution = 4442 s
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | . stage-out = 0 s
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | . log creation = 0 s
[2025-04-12 06:17:14] 2025-04-12 06:16:53,728 | INFO     | ..............................
[2025-04-12 06:17:14] 2025-04-12 06:16:53,829 | INFO     | 
[2025-04-12 06:17:14] 2025-04-12 06:16:53,829 | INFO     | job summary report
[2025-04-12 06:17:14] 2025-04-12 06:16:53,829 | INFO     | --------------------------------------------------
[2025-04-12 06:17:14] 2025-04-12 06:16:53,829 | INFO     | PanDA job id: 6600290179
[2025-04-12 06:17:14] 2025-04-12 06:16:53,829 | INFO     | task id: 44075164
[2025-04-12 06:17:14] 2025-04-12 06:16:53,829 | INFO     | errors: (none)
[2025-04-12 06:17:14] 2025-04-12 06:16:53,829 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 06:17:14] 2025-04-12 06:16:53,829 | INFO     | pilot state: finished 
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | transexitcode: 0
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | exeerrorcode: 0
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | exeerrordiag: 
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | exitcode: 0
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | exitmsg: OK
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | cpuconsumptiontime: 42148 s
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | nevents: 400
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | neventsw: 0
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | pid: 975192
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | pgrp: 975192
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | corecount: 12
[2025-04-12 06:17:14] 2025-04-12 06:16:53,830 | INFO     | event service: False
[2025-04-12 06:17:14] 2025-04-12 06:16:53,831 | INFO     | sizes: {0: 2417128, 1: 2417327, 8: 2417533, 12: 2417561, 4456: 2443619, 4457: 2452606, 4460: 2452790, 4474: 2452960}
[2025-04-12 06:17:14] 2025-04-12 06:16:53,835 | INFO     | --------------------------------------------------
[2025-04-12 06:17:14] 2025-04-12 06:16:53,835 | INFO     | 
[2025-04-12 06:17:14] 2025-04-12 06:16:53,835 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-12 06:17:14] 2025-04-12 06:16:53,871 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,871 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,871 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 06:17:14] 2025-04-12 06:16:53,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 06:17:14] 2025-04-12 06:16:53,873 | INFO     | job 6600290179 has completed (purged errors)
[2025-04-12 06:17:14] 2025-04-12 06:16:53,873 | INFO     | overall cleanup function is called
[2025-04-12 06:17:14] 2025-04-12 06:16:54,879 | INFO     | --- collectZombieJob: --- 10, [975192]
[2025-04-12 06:17:14] 2025-04-12 06:16:54,879 | INFO     | zombie collector waiting for pid 975192
[2025-04-12 06:17:14] 2025-04-12 06:16:54,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 06:17:14] 2025-04-12 06:16:54,879 | INFO     | collected zombie processes
[2025-04-12 06:17:14] 2025-04-12 06:16:54,880 | INFO     | will attempt to kill all subprocesses of pid=975192
[2025-04-12 06:17:14] 2025-04-12 06:16:55,017 | INFO     | PID=967942 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-12 06:17:14] 2025-04-12 06:16:55,018 | INFO     | .. there are 2 such processes running
[2025-04-12 06:17:14] 2025-04-12 06:16:55,947 | INFO     | process IDs to be killed: [975192] (in reverse order)
[2025-04-12 06:17:14] 2025-04-12 06:16:56,199 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 06:17:14] 2025-04-12 06:16:56,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 06:17:14] 2025-04-12 06:16:56,225 | INFO     | did not find any defunct processes belonging to 975192
[2025-04-12 06:17:14] 2025-04-12 06:16:56,242 | INFO     | did not find any defunct processes belonging to 975192
[2025-04-12 06:17:14] 2025-04-12 06:16:56,242 | INFO     | ready for new job
[2025-04-12 06:17:14] 2025-04-12 06:16:56,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 06:17:14] 2025-04-12 06:16:56,244 | INFO     | **************************************
[2025-04-12 06:17:14] 2025-04-12 06:16:56,244 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 06:17:14] 2025-04-12 06:16:56,244 | INFO     | **************************************
[2025-04-12 06:17:14] 2025-04-12 06:16:56,244 | INFO     | 
[2025-04-12 06:17:14] 2025-04-12 06:16:56,280 | INFO     | architecture information:
[2025-04-12 06:17:14] 2025-04-12 06:16:56,281 | INFO     | executing command: cat /etc/os-release
[2025-04-12 06:17:14] 2025-04-12 06:16:56,306 | INFO     | cat /etc/os-release:
[2025-04-12 06:17:14] NAME="CentOS Linux"
[2025-04-12 06:17:14] VERSION="7 (Core)"
[2025-04-12 06:17:14] ID="centos"
[2025-04-12 06:17:14] ID_LIKE="rhel fedora"
[2025-04-12 06:17:14] VERSION_ID="7"
[2025-04-12 06:17:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 06:17:14] ANSI_COLOR="0;31"
[2025-04-12 06:17:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 06:17:14] HOME_URL="https://www.centos.org/"
[2025-04-12 06:17:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 06:17:14] 
[2025-04-12 06:17:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 06:17:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 06:17:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 06:17:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 06:17:14] 
[2025-04-12 06:17:14] 2025-04-12 06:16:56,307 | INFO     | **************************************
[2025-04-12 06:17:14] 2025-04-12 06:16:56,810 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-12 06:17:14] 2025-04-12 06:16:56,834 | INFO     | sufficient remaining disk space (312484036608 B)
[2025-04-12 06:17:14] 2025-04-12 06:16:56,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 06:17:14] 2025-04-12 06:16:56,835 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 06:17:14] 2025-04-12 06:16:56,835 | INFO     | update_server=False
[2025-04-12 06:17:14] 2025-04-12 06:16:56,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 06:17:14] 2025-04-12 06:16:57,023 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 06:17:14] 2025-04-12 06:16:57,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 06:17:14] 2025-04-12 06:16:57,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 06:17:14] 2025-04-12 06:16:57,159 | INFO     | all data control threads have been joined
[2025-04-12 06:17:14] 2025-04-12 06:16:57,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 06:17:14] 2025-04-12 06:16:57,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 06:17:14] 2025-04-12 06:16:57,499 | INFO     | aborting loop
[2025-04-12 06:17:14] 2025-04-12 06:16:57,723 | INFO     | all payload control threads have been joined
[2025-04-12 06:17:14] 2025-04-12 06:16:57,839 | INFO     | [job] retrieve thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:57,843 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:58,063 | INFO     | [payload] failed_post thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:58,163 | INFO     | [data] control thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:58,275 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:58,507 | INFO     | [job] job monitor thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:58,527 | INFO     | all job control threads have been joined
[2025-04-12 06:17:14] 2025-04-12 06:16:58,719 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-04-12 06:17:14] 2025-04-12 06:16:58,731 | INFO     | [payload] control thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:58,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 06:17:14] 2025-04-12 06:16:59,019 | INFO     | [data] copytool_in thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:59,147 | INFO     | [job] validate thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:59,167 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:59,363 | INFO     | [payload] validate_post thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:59,399 | INFO     | [data] copytool_out thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:59,535 | INFO     | [job] control thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:16:59,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 06:17:14] 2025-04-12 06:16:59,840 | INFO     | [job] queue monitor thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:17:03,811 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:17:07,759 | INFO     | job.realtimelogging is not enabled
[2025-04-12 06:17:14] 2025-04-12 06:17:08,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 06:17:14] 2025-04-12 06:17:09,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140416573003584)>', '<ExcThread(monitor, started 140416271759104)>']
[2025-04-12 06:17:14] 2025-04-12 06:17:10,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 06:17:14] 2025-04-12 06:17:10,083 | INFO     | [monitor] control thread has ended
[2025-04-12 06:17:14] 2025-04-12 06:17:14,483 | INFO     | all workflow threads have been joined
[2025-04-12 06:17:14] 2025-04-12 06:17:14,483 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 06:17:14] 2025-04-12 06:17:14,483 | INFO     | traces error code: 0
[2025-04-12 06:17:14] 2025-04-12 06:17:14,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 06:17:14] 2025-04-12 06:17:14,631 [wrapper] ==== pilot stdout END ====
[2025-04-12 06:17:14] 2025-04-12 06:17:14,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 06:17:14] 2025-04-12 06:17:14,639 [wrapper] pilotpid: 967942
[2025-04-12 06:17:14] 2025-04-12 06:17:14,643 [wrapper] Pilot exit status: 0
[2025-04-12 06:17:14] 2025-04-12 06:17:14,662 [wrapper] pandaids: 6600290179
[2025-04-12 06:17:14] 2025-04-12 06:17:14,787 [wrapper] cleanup supervisor_pilot 1021120 967943
[2025-04-12 06:17:14] 2025-04-12 06:17:14,791 [wrapper] Test setup, not cleaning
[2025-04-12 06:17:14] 2025-04-12 06:17:14,803 [wrapper] apfmon messages muted
[2025-04-12 06:17:14] 2025-04-12 06:17:14,811 [wrapper] ==== wrapper stdout END ====
[2025-04-12 06:17:14] 2025-04-12 06:17:14,815 [wrapper] ==== wrapper stderr END ====
[2025-04-12 06:17:14]  *** Error codes and diagnostics ***
[2025-04-12 06:17:14]     "exeErrorCode": 0,
[2025-04-12 06:17:14]     "exeErrorDiag": "",
[2025-04-12 06:17:14]     "pilotErrorCode": 0,
[2025-04-12 06:17:14]     "pilotErrorDiag": "",
[2025-04-12 06:17:14]  *** Listing of results directory ***
[2025-04-12 06:17:14] total 413244
[2025-04-12 06:17:14] -rw-r--r-- 1 boinc boinc    495897 Apr 11 20:03 pilot3.tar.gz
[2025-04-12 06:17:14] -rw-r--r-- 1 boinc boinc      5111 Apr 11 20:06 queuedata.json
[2025-04-12 06:17:14] -rwx------ 1 boinc boinc     37140 Apr 11 20:06 runpilot2-wrapper.sh
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc       100 Apr 12 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 06:17:14] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 05:01 run_atlas
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc       105 Apr 12 05:01 job.xml
[2025-04-12 06:17:14] -rw-r--r-- 2 boinc boinc     17569 Apr 12 05:01 start_atlas.sh
[2025-04-12 06:17:14] drwxrwx--x 2 boinc boinc      4096 Apr 12 05:01 shared
[2025-04-12 06:17:14] -rw-r--r-- 2 boinc boinc    508890 Apr 12 05:01 input.tar.gz
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc      6938 Apr 12 05:01 init_data.xml
[2025-04-12 06:17:14] -rw-r--r-- 2 boinc boinc 223208656 Apr 12 05:01 EVNT.44075162._000847.pool.root.1
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc         0 Apr 12 05:01 boinc_lockfile
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc      2550 Apr 12 05:01 pandaJob.out
[2025-04-12 06:17:14] -rw------- 1 boinc boinc       424 Apr 12 05:01 setup.sh.local
[2025-04-12 06:17:14] -rw------- 1 boinc boinc    986068 Apr 12 05:01 agis_schedconf.cvmfs.json
[2025-04-12 06:17:14] -rw------- 1 boinc boinc   1603529 Apr 12 05:02 agis_ddmendpoints.agis.ALL.json
[2025-04-12 06:17:14] drwx------ 4 boinc boinc      4096 Apr 12 05:02 pilot3
[2025-04-12 06:17:14] -rw------- 1 boinc boinc 194506391 Apr 12 06:15 HITS.44075164._030915.pool.root.1
[2025-04-12 06:17:14] -rw------- 1 boinc boinc        95 Apr 12 06:16 pilot_heartbeat.json
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc       529 Apr 12 06:16 boinc_task_state.xml
[2025-04-12 06:17:14] -rw------- 1 boinc boinc      1016 Apr 12 06:16 memory_monitor_summary.json
[2025-04-12 06:17:14] -rw------- 1 boinc boinc    357850 Apr 12 06:16 log.44075164._030915.job.log.tgz.1
[2025-04-12 06:17:14] -rw------- 1 boinc boinc      7646 Apr 12 06:16 heartbeat.json
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc        27 Apr 12 06:17 wrapper_checkpoint.txt
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc      8192 Apr 12 06:17 boinc_mmap_file
[2025-04-12 06:17:14] -rw------- 1 boinc boinc      4449 Apr 12 06:17 pilotlog.txt
[2025-04-12 06:17:14] -rw------- 1 boinc boinc    442478 Apr 12 06:17 log.44075164._030915.job.log.1
[2025-04-12 06:17:14] -rw------- 1 boinc boinc       357 Apr 12 06:17 output.list
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc       620 Apr 12 06:17 runtime_log
[2025-04-12 06:17:14] -rw------- 1 boinc boinc    819200 Apr 12 06:17 result.tar.gz
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc     11409 Apr 12 06:17 runtime_log.err
[2025-04-12 06:17:14] -rw------- 1 boinc boinc       651 Apr 12 06:17 UkgKDmLpZN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCCxKDmD30NVm.diag
[2025-04-12 06:17:14] -rw-rw-r-- 1 boinc boinc     21839 Apr 12 06:17 stderr.txt
[2025-04-12 06:17:14] HITS file was successfully produced:
[2025-04-12 06:17:14] -rw------- 1 boinc boinc 194506391 Apr 12 06:15 shared/HITS.pool.root.1
[2025-04-12 06:17:14]  *** Contents of shared directory: ***
[2025-04-12 06:17:14] total 409256
[2025-04-12 06:17:14] -rw-r--r-- 2 boinc boinc     17569 Apr 12 05:01 start_atlas.sh
[2025-04-12 06:17:14] -rw-r--r-- 2 boinc boinc    508890 Apr 12 05:01 input.tar.gz
[2025-04-12 06:17:14] -rw-r--r-- 2 boinc boinc 223208656 Apr 12 05:01 ATLAS.root_0
[2025-04-12 06:17:14] -rw------- 1 boinc boinc 194506391 Apr 12 06:15 HITS.pool.root.1
[2025-04-12 06:17:14] -rw------- 1 boinc boinc    819200 Apr 12 06:17 result.tar.gz
06:17:16 (963827): run_atlas exited; CPU time 42462.661580
06:17:16 (963827): called boinc_finish(0)

</stderr_txt>
]]>

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