Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:51:20 (995044): wrapper (7.7.26015): starting
05:51:20 (995044): wrapper: running run_atlas (--nthreads 12)
[2025-04-12 05:51:20] Arguments: --nthreads 12
[2025-04-12 05:51:20] Threads: 12
[2025-04-12 05:51:20] Checking for CVMFS
[2025-04-12 05:51:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-12 05:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-12 05:51:20] Running cvmfs_config stat atlas.cern.ch
[2025-04-12 05:51:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-12 05:51:21] 2.12.6.0 4038419 1513 53236 144776 2 187 3710085 4096001 912 130560 0 2590746 99.997 155255 868 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-12 05:51:21] CVMFS is ok
[2025-04-12 05:51:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-12 05:51:21] Checking for apptainer binary...
[2025-04-12 05:51:21] apptainer is not installed, using version from CVMFS
[2025-04-12 05:51:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-12 05:51:21] epyc7v12
[2025-04-12 05:51:21] apptainer works
[2025-04-12 05:51:21] Set ATHENA_PROC_NUMBER=12
[2025-04-12 05:51:21] Set ATHENA_CORE_NUMBER=12
[2025-04-12 05:51:21] Starting ATLAS job with PandaID=6600289396
[2025-04-12 05:51:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 07:10:41]  *** The last 200 lines of the pilot log: ***
[2025-04-12 07:10:41] 2025-04-12 07:09:35,925 | INFO     | PID=999152 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-12 07:10:41] 2025-04-12 07:09:35,926 | INFO     | .. there are 20 such processes running
[2025-04-12 07:10:41] 2025-04-12 07:09:38,063 | INFO     | monitor loop #324: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:38,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:40,575 | INFO     | monitor loop #325: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:40,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:43,083 | INFO     | monitor loop #326: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:43,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:45,587 | INFO     | monitor loop #327: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:45,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:48,099 | INFO     | monitor loop #328: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:48,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:50,611 | INFO     | monitor loop #329: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:50,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:53,123 | INFO     | monitor loop #330: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:53,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:55,629 | INFO     | monitor loop #331: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:55,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:58,139 | INFO     | monitor loop #332: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:09:58,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:09:59,630 | INFO     | PID=999152 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-12 07:10:41] 2025-04-12 07:09:59,630 | INFO     | .. there are 20 such processes running
[2025-04-12 07:10:41] 2025-04-12 07:10:00,647 | INFO     | monitor loop #333: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:10:00,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:10:03,163 | INFO     | monitor loop #334: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:10:03,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:10:05,675 | INFO     | monitor loop #335: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:10:05,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:10:08,187 | INFO     | monitor loop #336: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:10:08,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:10:10,703 | INFO     | monitor loop #337: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:10:10,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:10:13,215 | INFO     | monitor loop #338: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:10:13,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:10:15,727 | INFO     | monitor loop #339: job 0:6600289396 is in state 'finished'
[2025-04-12 07:10:41] 2025-04-12 07:10:15,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 07:10:41] 2025-04-12 07:10:17,163 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-12 07:10:41] 2025-04-12 07:10:17,164 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6600289396/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 07:10:41] 2025-04-12 07:10:17,164 | INFO     | extracted standard info from prmon json
[2025-04-12 07:10:41] 2025-04-12 07:10:17,164 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 07:10:41] 2025-04-12 07:10:17,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 07:10:41] 2025-04-12 07:10:17,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 07:10:41] 2025-04-12 07:10:17,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 07:10:41] 2025-04-12 07:10:17,171 | INFO     | fitting pss+swap vs Time
[2025-04-12 07:10:41] 2025-04-12 07:10:17,171 | INFO     | sum of square deviations: 101857071.768116
[2025-04-12 07:10:41] 2025-04-12 07:10:17,172 | INFO     | sum of deviations: 14363191995.347822
[2025-04-12 07:10:41] 2025-04-12 07:10:17,172 | INFO     | mean x: 1744439512.057971
[2025-04-12 07:10:41] 2025-04-12 07:10:17,172 | INFO     | mean y: 2619051.913043478
[2025-04-12 07:10:41] 2025-04-12 07:10:17,172 | INFO     | -- intersect: -245986384961.47958
[2025-04-12 07:10:41] 2025-04-12 07:10:17,172 | INFO     | intersect: -245986384961.47958
[2025-04-12 07:10:41] 2025-04-12 07:10:17,172 | INFO     | chi2: 1.9590489594459821
[2025-04-12 07:10:41] 2025-04-12 07:10:17,172 | INFO     | -- intersect: -245986384961.47958
[2025-04-12 07:10:41] 2025-04-12 07:10:17,173 | INFO     | current memory leak: 141.01 B/s (using 69 data points, chi2=1.96)
[2025-04-12 07:10:41] 2025-04-12 07:10:17,173 | INFO     | ..............................
[2025-04-12 07:10:41] 2025-04-12 07:10:17,173 | INFO     | . Timing measurements:
[2025-04-12 07:10:41] 2025-04-12 07:10:17,173 | INFO     | . get job = 0 s
[2025-04-12 07:10:41] 2025-04-12 07:10:17,173 | INFO     | . initial setup = 2 s
[2025-04-12 07:10:41] 2025-04-12 07:10:17,174 | INFO     | . payload setup = 9 s
[2025-04-12 07:10:41] 2025-04-12 07:10:17,174 | INFO     | . stage-in = 0 s
[2025-04-12 07:10:41] 2025-04-12 07:10:17,174 | INFO     | . payload execution = 4608 s
[2025-04-12 07:10:41] 2025-04-12 07:10:17,174 | INFO     | . stage-out = 3 s
[2025-04-12 07:10:41] 2025-04-12 07:10:17,174 | INFO     | . log creation = 0 s
[2025-04-12 07:10:41] 2025-04-12 07:10:17,174 | INFO     | ..............................
[2025-04-12 07:10:41] 2025-04-12 07:10:17,575 | INFO     | 
[2025-04-12 07:10:41] 2025-04-12 07:10:17,575 | INFO     | job summary report
[2025-04-12 07:10:41] 2025-04-12 07:10:17,575 | INFO     | --------------------------------------------------
[2025-04-12 07:10:41] 2025-04-12 07:10:17,575 | INFO     | PanDA job id: 6600289396
[2025-04-12 07:10:41] 2025-04-12 07:10:17,575 | INFO     | task id: 44075164
[2025-04-12 07:10:41] 2025-04-12 07:10:17,575 | INFO     | errors: (none)
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | pilot state: finished 
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | transexitcode: 0
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | exeerrorcode: 0
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | exeerrordiag: 
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | exitcode: 0
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | exitmsg: OK
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | cpuconsumptiontime: 34117 s
[2025-04-12 07:10:41] 2025-04-12 07:10:17,576 | INFO     | nevents: 400
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | neventsw: 0
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | pid: 1006422
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | pgrp: 1006422
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | corecount: 12
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | event service: False
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | sizes: {0: 2417128, 1: 2417327, 8: 2417533, 12: 2417561, 4622: 2443620, 4626: 2452607, 4629: 2452791, 4701: 2452961}
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | --------------------------------------------------
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | 
[2025-04-12 07:10:41] 2025-04-12 07:10:17,577 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-04-12 07:10:41] 2025-04-12 07:10:17,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 07:10:41] 2025-04-12 07:10:17,649 | INFO     | job 6600289396 has completed (purged errors)
[2025-04-12 07:10:41] 2025-04-12 07:10:17,650 | INFO     | overall cleanup function is called
[2025-04-12 07:10:41] 2025-04-12 07:10:18,659 | INFO     | --- collectZombieJob: --- 10, [1006422]
[2025-04-12 07:10:41] 2025-04-12 07:10:18,659 | INFO     | zombie collector waiting for pid 1006422
[2025-04-12 07:10:41] 2025-04-12 07:10:18,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 07:10:41] 2025-04-12 07:10:18,659 | INFO     | collected zombie processes
[2025-04-12 07:10:41] 2025-04-12 07:10:18,659 | INFO     | will attempt to kill all subprocesses of pid=1006422
[2025-04-12 07:10:41] 2025-04-12 07:10:20,050 | INFO     | process IDs to be killed: [1006422] (in reverse order)
[2025-04-12 07:10:41] 2025-04-12 07:10:23,145 | INFO     | PID=999152 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-12 07:10:41] 2025-04-12 07:10:23,145 | INFO     | .. there are 20 such processes running
[2025-04-12 07:10:41] 2025-04-12 07:10:24,551 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 07:10:41] 2025-04-12 07:10:24,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 07:10:41] 2025-04-12 07:10:24,586 | INFO     | did not find any defunct processes belonging to 1006422
[2025-04-12 07:10:41] 2025-04-12 07:10:24,625 | INFO     | did not find any defunct processes belonging to 1006422
[2025-04-12 07:10:41] 2025-04-12 07:10:24,626 | INFO     | ready for new job
[2025-04-12 07:10:41] 2025-04-12 07:10:24,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 07:10:41] 2025-04-12 07:10:24,628 | INFO     | **************************************
[2025-04-12 07:10:41] 2025-04-12 07:10:24,628 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 07:10:41] 2025-04-12 07:10:24,628 | INFO     | **************************************
[2025-04-12 07:10:41] 2025-04-12 07:10:24,628 | INFO     | 
[2025-04-12 07:10:41] 2025-04-12 07:10:24,665 | INFO     | architecture information:
[2025-04-12 07:10:41] 2025-04-12 07:10:24,675 | INFO     | executing command: cat /etc/os-release
[2025-04-12 07:10:41] 2025-04-12 07:10:24,855 | INFO     | cat /etc/os-release:
[2025-04-12 07:10:41] NAME="CentOS Linux"
[2025-04-12 07:10:41] VERSION="7 (Core)"
[2025-04-12 07:10:41] ID="centos"
[2025-04-12 07:10:41] ID_LIKE="rhel fedora"
[2025-04-12 07:10:41] VERSION_ID="7"
[2025-04-12 07:10:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 07:10:41] ANSI_COLOR="0;31"
[2025-04-12 07:10:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 07:10:41] HOME_URL="https://www.centos.org/"
[2025-04-12 07:10:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 07:10:41] 
[2025-04-12 07:10:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 07:10:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 07:10:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 07:10:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 07:10:41] 
[2025-04-12 07:10:41] 2025-04-12 07:10:24,855 | INFO     | **************************************
[2025-04-12 07:10:41] 2025-04-12 07:10:25,359 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-04-12 07:10:41] 2025-04-12 07:10:25,499 | INFO     | sufficient remaining disk space (309707407360 B)
[2025-04-12 07:10:41] 2025-04-12 07:10:25,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 07:10:41] 2025-04-12 07:10:25,500 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 07:10:41] 2025-04-12 07:10:25,500 | INFO     | update_server=False
[2025-04-12 07:10:41] 2025-04-12 07:10:25,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 07:10:41] 2025-04-12 07:10:25,500 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 07:10:41] 2025-04-12 07:10:25,501 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 07:10:41] 2025-04-12 07:10:25,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 07:10:41] 2025-04-12 07:10:25,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 07:10:41] 2025-04-12 07:10:25,833 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-12 07:10:41] 2025-04-12 07:10:25,834 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-12 07:10:41] 2025-04-12 07:10:25,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 07:10:41] 2025-04-12 07:10:25,834 | INFO     | will abort loop
[2025-04-12 07:10:41] 2025-04-12 07:10:26,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 07:10:41] 2025-04-12 07:10:26,331 | INFO     | all data control threads have been joined
[2025-04-12 07:10:41] 2025-04-12 07:10:26,507 | INFO     | [job] retrieve thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:26,527 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:26,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 07:10:41] 2025-04-12 07:10:26,563 | INFO     | [payload] validate_post thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:26,567 | INFO     | [payload] failed_post thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:26,719 | INFO     | all payload control threads have been joined
[2025-04-12 07:10:41] 2025-04-12 07:10:26,731 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:26,839 | INFO     | [job] job monitor thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:27,031 | INFO     | all job control threads have been joined
[2025-04-12 07:10:41] 2025-04-12 07:10:27,255 | INFO     | [job] validate thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:27,335 | INFO     | [data] control thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:27,507 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:27,535 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:27,547 | INFO     | [job] queue monitor thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:27,615 | INFO     | [data] copytool_in thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:27,723 | INFO     | [payload] control thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:28,035 | INFO     | [job] control thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:28,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 07:10:41] 2025-04-12 07:10:28,147 | INFO     | [data] copytool_out thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:32,159 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 07:10:41] 2025-04-12 07:10:33,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260347729728)>', '<ExcThread(monitor, started 140259916498688)>']
[2025-04-12 07:10:41] 2025-04-12 07:10:33,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 07:10:41] 2025-04-12 07:10:33,543 | INFO     | [monitor] control thread has ended
[2025-04-12 07:10:41] 2025-04-12 07:10:38,083 | INFO     | all workflow threads have been joined
[2025-04-12 07:10:41] 2025-04-12 07:10:38,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 07:10:41] 2025-04-12 07:10:38,083 | INFO     | traces error code: 0
[2025-04-12 07:10:41] 2025-04-12 07:10:38,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 07:10:41] 2025-04-12 07:10:38,651 [wrapper] ==== pilot stdout END ====
[2025-04-12 07:10:41] 2025-04-12 07:10:38,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 07:10:41] 2025-04-12 07:10:38,791 [wrapper] pilotpid: 999152
[2025-04-12 07:10:41] 2025-04-12 07:10:38,867 [wrapper] Pilot exit status: 0
[2025-04-12 07:10:41] 2025-04-12 07:10:39,171 [wrapper] pandaids: 6600289396
[2025-04-12 07:10:41] 2025-04-12 07:10:39,898 [wrapper] cleanup supervisor_pilot 1531966 999153
[2025-04-12 07:10:41] 2025-04-12 07:10:39,947 [wrapper] Test setup, not cleaning
[2025-04-12 07:10:41] 2025-04-12 07:10:39,973 [wrapper] apfmon messages muted
[2025-04-12 07:10:41] 2025-04-12 07:10:39,997 [wrapper] ==== wrapper stdout END ====
[2025-04-12 07:10:41] 2025-04-12 07:10:40,052 [wrapper] ==== wrapper stderr END ====
[2025-04-12 07:10:41]  *** Error codes and diagnostics ***
[2025-04-12 07:10:41]     "exeErrorCode": 0,
[2025-04-12 07:10:41]     "exeErrorDiag": "",
[2025-04-12 07:10:41]     "pilotErrorCode": 0,
[2025-04-12 07:10:41]     "pilotErrorDiag": "",
[2025-04-12 07:10:41]  *** Listing of results directory ***
[2025-04-12 07:10:41] total 403288
[2025-04-12 07:10:41] -rw-r--r-- 1 boinc boinc    495897 Apr 11 20:03 pilot3.tar.gz
[2025-04-12 07:10:41] -rw-r--r-- 1 boinc boinc      5111 Apr 11 20:06 queuedata.json
[2025-04-12 07:10:41] -rwx------ 1 boinc boinc     37140 Apr 11 20:06 runpilot2-wrapper.sh
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc       100 Apr 12 05:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 07:10:41] -rwxr-xr-x 1 boinc boinc      7986 Apr 12 05:51 run_atlas
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc       105 Apr 12 05:51 job.xml
[2025-04-12 07:10:41] -rw-r--r-- 2 boinc boinc 218546484 Apr 12 05:51 EVNT.44075162._000645.pool.root.1
[2025-04-12 07:10:41] -rw-r--r-- 2 boinc boinc     17569 Apr 12 05:51 start_atlas.sh
[2025-04-12 07:10:41] drwxrwx--x 2 boinc boinc      4096 Apr 12 05:51 shared
[2025-04-12 07:10:41] -rw-r--r-- 2 boinc boinc    508886 Apr 12 05:51 input.tar.gz
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc         0 Apr 12 05:51 boinc_lockfile
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc      2550 Apr 12 05:51 pandaJob.out
[2025-04-12 07:10:41] -rw------- 1 boinc boinc       424 Apr 12 05:51 setup.sh.local
[2025-04-12 07:10:41] -rw------- 1 boinc boinc    986068 Apr 12 05:51 agis_schedconf.cvmfs.json
[2025-04-12 07:10:41] -rw------- 1 boinc boinc   1603529 Apr 12 05:51 agis_ddmendpoints.agis.ALL.json
[2025-04-12 07:10:41] drwx------ 4 boinc boinc      4096 Apr 12 05:51 pilot3
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc      6947 Apr 12 06:28 init_data.xml
[2025-04-12 07:10:41] -rw------- 1 boinc boinc 188910279 Apr 12 07:07 HITS.44075164._030684.pool.root.1
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc       530 Apr 12 07:08 boinc_task_state.xml
[2025-04-12 07:10:41] -rw------- 1 boinc boinc      1017 Apr 12 07:08 memory_monitor_summary.json
[2025-04-12 07:10:41] -rw------- 1 boinc boinc    375724 Apr 12 07:09 log.44075164._030684.job.log.tgz.1
[2025-04-12 07:10:41] -rw------- 1 boinc boinc        95 Apr 12 07:09 pilot_heartbeat.json
[2025-04-12 07:10:41] -rw------- 1 boinc boinc      7652 Apr 12 07:10 heartbeat.json
[2025-04-12 07:10:41] -rw------- 1 boinc boinc      4686 Apr 12 07:10 pilotlog.txt
[2025-04-12 07:10:41] -rw------- 1 boinc boinc    457006 Apr 12 07:10 log.44075164._030684.job.log.1
[2025-04-12 07:10:41] -rw------- 1 boinc boinc       357 Apr 12 07:10 output.list
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc       620 Apr 12 07:10 runtime_log
[2025-04-12 07:10:41] -rw------- 1 boinc boinc    849920 Apr 12 07:10 result.tar.gz
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc      8192 Apr 12 07:10 boinc_mmap_file
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc        27 Apr 12 07:10 wrapper_checkpoint.txt
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc     11409 Apr 12 07:10 runtime_log.err
[2025-04-12 07:10:41] -rw------- 1 boinc boinc       651 Apr 12 07:10 TSWMDmKpZN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmB8OLDmAN80un.diag
[2025-04-12 07:10:41] -rw-rw-r-- 1 boinc boinc     22299 Apr 12 07:10 stderr.txt
[2025-04-12 07:10:41] HITS file was successfully produced:
[2025-04-12 07:10:41] -rw------- 1 boinc boinc 188910279 Apr 12 07:07 shared/HITS.pool.root.1
[2025-04-12 07:10:41]  *** Contents of shared directory: ***
[2025-04-12 07:10:41] total 399272
[2025-04-12 07:10:41] -rw-r--r-- 2 boinc boinc 218546484 Apr 12 05:51 ATLAS.root_0
[2025-04-12 07:10:41] -rw-r--r-- 2 boinc boinc     17569 Apr 12 05:51 start_atlas.sh
[2025-04-12 07:10:41] -rw-r--r-- 2 boinc boinc    508886 Apr 12 05:51 input.tar.gz
[2025-04-12 07:10:41] -rw------- 1 boinc boinc 188910279 Apr 12 07:07 HITS.pool.root.1
[2025-04-12 07:10:41] -rw------- 1 boinc boinc    849920 Apr 12 07:10 result.tar.gz
07:10:43 (995044): run_atlas exited; CPU time 34391.535733
07:10:43 (995044): called boinc_finish(0)

</stderr_txt>
]]>

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