Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:38:53 (2989894): wrapper (7.7.26015): starting
14:38:53 (2989894): wrapper: running run_atlas (--nthreads 10)
[2025-04-11 14:38:53] Arguments: --nthreads 10
[2025-04-11 14:38:53] Threads: 10
[2025-04-11 14:38:53] Checking for CVMFS
[2025-04-11 14:38:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 14:38:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 14:38:55] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 14:38:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 14:38:56] 2.12.6.0 456607 14493 165592 144776 2 259 25137572 32935936 17324 16776704 0 61925858 99.598 70758776 24780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-11 14:38:56] CVMFS is ok
[2025-04-11 14:38:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 14:38:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-11 14:38:56] Further information can be found at the LHC@home message board.
[2025-04-11 14:38:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 14:38:56] Checking for apptainer binary...
[2025-04-11 14:38:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 14:38:56] Running /usr/bin/apptainer --version
[2025-04-11 14:38:57] apptainer version 1.4.0-1.el9
[2025-04-11 14:38:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 14:38:59] c-8-37.aglt2.org
[2025-04-11 14:38:59] apptainer works
[2025-04-11 14:39:00] Set ATHENA_PROC_NUMBER=10
[2025-04-11 14:39:00] Set ATHENA_CORE_NUMBER=10
[2025-04-11 14:39:00] Starting ATLAS job with PandaID=6596322581
[2025-04-11 14:39:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 11:26:07]  *** The last 200 lines of the pilot log: ***
[2025-04-12 11:26:07] 2025-04-12 15:25:39,402 | INFO     | PID=3000676 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-12 11:26:07] 2025-04-12 15:25:39,402 | INFO     | .. there are 39 such processes running
[2025-04-12 11:26:07] 2025-04-12 15:25:41,194 | INFO     | monitor loop #2821: job 0:6596322581 is in state 'finished'
[2025-04-12 11:26:07] 2025-04-12 15:25:41,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 11:26:07] 2025-04-12 15:25:43,699 | INFO     | monitor loop #2822: job 0:6596322581 is in state 'finished'
[2025-04-12 11:26:07] 2025-04-12 15:25:43,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-12 11:26:07] 2025-04-12 15:25:44,082 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-12 11:26:07] 2025-04-12 15:25:44,083 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6596322581/memory_monitor_summary.json (trf name=prmon)
[2025-04-12 11:26:07] 2025-04-12 15:25:44,167 | INFO     | extracted standard info from prmon json
[2025-04-12 11:26:07] 2025-04-12 15:25:44,167 | INFO     | extracted standard memory fields from prmon json
[2025-04-12 11:26:07] 2025-04-12 15:25:44,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-12 11:26:07] 2025-04-12 15:25:44,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-12 11:26:07] 2025-04-12 15:25:44,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-12 11:26:07] 2025-04-12 15:25:44,616 | INFO     | fitting pss+swap vs Time
[2025-04-12 11:26:07] 2025-04-12 15:25:44,697 | INFO     | sum of square deviations: 563048472515.488
[2025-04-12 11:26:07] 2025-04-12 15:25:45,071 | INFO     | sum of deviations: 1121912925717.3545
[2025-04-12 11:26:07] 2025-04-12 15:25:45,072 | INFO     | mean x: 1744434299.632787
[2025-04-12 11:26:07] 2025-04-12 15:25:45,072 | INFO     | mean y: 2405258.081147541
[2025-04-12 11:26:07] 2025-04-12 15:25:45,072 | INFO     | -- intersect: -3473500430.960375
[2025-04-12 11:26:07] 2025-04-12 15:25:45,072 | INFO     | intersect: -3473500430.960375
[2025-04-12 11:26:07] 2025-04-12 15:25:45,074 | INFO     | chi2: 15.052689762371829
[2025-04-12 11:26:07] 2025-04-12 15:25:45,094 | INFO     | sum of square deviations: 556154308934.0459
[2025-04-12 11:26:07] 2025-04-12 15:25:45,349 | INFO     | sum of deviations: 1514857245840.0623
[2025-04-12 11:26:07] 2025-04-12 15:25:45,350 | INFO     | mean x: 1744434147.1374485
[2025-04-12 11:26:07] 2025-04-12 15:25:45,350 | INFO     | mean y: 2413949.987654321
[2025-04-12 11:26:07] 2025-04-12 15:25:45,350 | INFO     | -- intersect: -4749088762.895892
[2025-04-12 11:26:07] 2025-04-12 15:25:45,350 | INFO     | intersect: -4749088762.895892
[2025-04-12 11:26:07] 2025-04-12 15:25:45,377 | INFO     | chi2: 11.20856510937497
[2025-04-12 11:26:07] 2025-04-12 15:25:45,377 | INFO     | current chi2=11.20856510937497 (change=25.53779233932173 %)
[2025-04-12 11:26:07] 2025-04-12 15:25:45,379 | INFO     | sum of square deviations: 549316435818.8974
[2025-04-12 11:26:07] 2025-04-12 15:25:45,834 | INFO     | sum of deviations: 1531350136490.71
[2025-04-12 11:26:07] 2025-04-12 15:25:45,834 | INFO     | mean x: 1744433994.6396694
[2025-04-12 11:26:07] 2025-04-12 15:25:45,835 | INFO     | mean y: 2414316.8892561984
[2025-04-12 11:26:07] 2025-04-12 15:25:45,835 | INFO     | -- intersect: -4860610092.362534
[2025-04-12 11:26:07] 2025-04-12 15:25:45,835 | INFO     | intersect: -4860610092.362534
[2025-04-12 11:26:07] 2025-04-12 15:25:45,865 | INFO     | chi2: 11.176483012175334
[2025-04-12 11:26:07] 2025-04-12 15:25:45,865 | INFO     | current chi2=11.176483012175334 (change=0.28622840556818474 %)
[2025-04-12 11:26:07] 2025-04-12 15:25:45,865 | INFO     | right removable region: 1209
[2025-04-12 11:26:07] 2025-04-12 15:25:45,879 | INFO     | sum of square deviations: 556153465914.046
[2025-04-12 11:26:07] 2025-04-12 15:25:45,953 | INFO     | sum of deviations: 755287584809.8774
[2025-04-12 11:26:07] 2025-04-12 15:25:45,954 | INFO     | mean x: 1744434452.1374485
[2025-04-12 11:26:07] 2025-04-12 15:25:45,954 | INFO     | mean y: 2413365.024691358
[2025-04-12 11:26:07] 2025-04-12 15:25:45,954 | INFO     | -- intersect: -2366626414.397745
[2025-04-12 11:26:07] 2025-04-12 15:25:45,954 | INFO     | intersect: -2366626414.397745
[2025-04-12 11:26:07] 2025-04-12 15:25:45,956 | INFO     | chi2: 11.526775672305163
[2025-04-12 11:26:07] 2025-04-12 15:25:45,956 | INFO     | current chi2=11.526775672305163 (change=23.423814253321147 %)
[2025-04-12 11:26:07] 2025-04-12 15:25:45,956 | INFO     | left removable region: 10
[2025-04-12 11:26:07] 2025-04-12 15:25:45,958 | INFO     | sum of square deviations: 534469771252.2776
[2025-04-12 11:26:07] 2025-04-12 15:25:46,017 | INFO     | sum of deviations: 910581195450.3145
[2025-04-12 11:26:07] 2025-04-12 15:25:46,018 | INFO     | mean x: 1744434269.149291
[2025-04-12 11:26:07] 2025-04-12 15:25:46,018 | INFO     | mean y: 2428644.0150125106
[2025-04-12 11:26:07] 2025-04-12 15:25:46,018 | INFO     | -- intersect: -2969580490.3176484
[2025-04-12 11:26:07] 2025-04-12 15:25:46,018 | INFO     | intersect: -2969580490.3176484
[2025-04-12 11:26:07] 2025-04-12 15:25:46,020 | INFO     | chi2: 5.822541707972856
[2025-04-12 11:26:07] 2025-04-12 15:25:46,020 | INFO     | -- intersect: -2969580490.3176484
[2025-04-12 11:26:07] 2025-04-12 15:25:46,020 | INFO     | current memory leak: 1.70 B/s (using 1199 data points, chi2=5.82)
[2025-04-12 11:26:07] 2025-04-12 15:25:46,081 | INFO     | ..............................
[2025-04-12 11:26:07] 2025-04-12 15:25:46,081 | INFO     | . Timing measurements:
[2025-04-12 11:26:07] 2025-04-12 15:25:46,081 | INFO     | . get job = 0 s
[2025-04-12 11:26:07] 2025-04-12 15:25:46,081 | INFO     | . initial setup = 9 s
[2025-04-12 11:26:07] 2025-04-12 15:25:46,081 | INFO     | . payload setup = 78 s
[2025-04-12 11:26:07] 2025-04-12 15:25:46,082 | INFO     | . stage-in = 0 s
[2025-04-12 11:26:07] 2025-04-12 15:25:46,082 | INFO     | . payload execution = 74422 s
[2025-04-12 11:26:07] 2025-04-12 15:25:46,082 | INFO     | . stage-out = 11 s
[2025-04-12 11:26:07] 2025-04-12 15:25:46,082 | INFO     | . log creation = 3 s
[2025-04-12 11:26:07] 2025-04-12 15:25:46,082 | INFO     | ..............................
[2025-04-12 11:26:07] 2025-04-12 15:25:46,616 | INFO     | 
[2025-04-12 11:26:07] 2025-04-12 15:25:46,616 | INFO     | job summary report
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | --------------------------------------------------
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | PanDA job id: 6596322581
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | task id: 44075164
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | errors: (none)
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | pilot state: finished 
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | transexitcode: 0
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | exeerrorcode: 0
[2025-04-12 11:26:07] 2025-04-12 15:25:46,617 | INFO     | exeerrordiag: 
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | exitcode: 0
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | exitmsg: OK
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | cpuconsumptiontime: 54480 s
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | nevents: 400
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | neventsw: 0
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | pid: 3024337
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | pgrp: 3024337
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | corecount: 10
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | event service: False
[2025-04-12 11:26:07] 2025-04-12 15:25:46,618 | INFO     | sizes: {0: 2416499, 2: 2417100, 3: 2417184, 4: 2417212, 6: 2417240, 7: 2417439, 8: 2417595, 19: 2417623, 30: 2417651, 41: 2417679, 53: 2417707, 64: 2418015, 65: 24
[2025-04-12 11:26:07] 2025-04-12 15:25:46,619 | INFO     | --------------------------------------------------
[2025-04-12 11:26:07] 2025-04-12 15:25:46,619 | INFO     | 
[2025-04-12 11:26:07] 2025-04-12 15:25:46,619 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-12 11:26:07] 2025-04-12 15:25:46,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 11:26:07] 2025-04-12 15:25:46,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 11:26:07] 2025-04-12 15:25:46,737 | INFO     | job 6596322581 has completed (purged errors)
[2025-04-12 11:26:07] 2025-04-12 15:25:46,737 | INFO     | overall cleanup function is called
[2025-04-12 11:26:07] 2025-04-12 15:25:47,762 | INFO     | --- collectZombieJob: --- 10, [3024337]
[2025-04-12 11:26:07] 2025-04-12 15:25:47,762 | INFO     | zombie collector waiting for pid 3024337
[2025-04-12 11:26:07] 2025-04-12 15:25:47,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 11:26:07] 2025-04-12 15:25:47,762 | INFO     | collected zombie processes
[2025-04-12 11:26:07] 2025-04-12 15:25:47,763 | INFO     | will attempt to kill all subprocesses of pid=3024337
[2025-04-12 11:26:07] 2025-04-12 15:25:50,009 | INFO     | process IDs to be killed: [3024337] (in reverse order)
[2025-04-12 11:26:07] 2025-04-12 15:25:50,977 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 11:26:07] 2025-04-12 15:25:50,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 11:26:07] 2025-04-12 15:25:51,039 | INFO     | did not find any defunct processes belonging to 3024337
[2025-04-12 11:26:07] 2025-04-12 15:25:51,103 | INFO     | did not find any defunct processes belonging to 3024337
[2025-04-12 11:26:07] 2025-04-12 15:25:51,103 | INFO     | ready for new job
[2025-04-12 11:26:07] 2025-04-12 15:25:51,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 11:26:07] 2025-04-12 15:25:51,115 | INFO     | **************************************
[2025-04-12 11:26:07] 2025-04-12 15:25:51,116 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 11:26:07] 2025-04-12 15:25:51,116 | INFO     | **************************************
[2025-04-12 11:26:07] 2025-04-12 15:25:51,116 | INFO     | 
[2025-04-12 11:26:07] 2025-04-12 15:25:51,130 | INFO     | architecture information:
[2025-04-12 11:26:07] 2025-04-12 15:25:51,134 | INFO     | executing command: cat /etc/os-release
[2025-04-12 11:26:07] 2025-04-12 15:25:51,316 | INFO     | cat /etc/os-release:
[2025-04-12 11:26:07] NAME="CentOS Linux"
[2025-04-12 11:26:07] VERSION="7 (Core)"
[2025-04-12 11:26:07] ID="centos"
[2025-04-12 11:26:07] ID_LIKE="rhel fedora"
[2025-04-12 11:26:07] VERSION_ID="7"
[2025-04-12 11:26:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 11:26:07] ANSI_COLOR="0;31"
[2025-04-12 11:26:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 11:26:07] HOME_URL="https://www.centos.org/"
[2025-04-12 11:26:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 11:26:07] 
[2025-04-12 11:26:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 11:26:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 11:26:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 11:26:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 11:26:07] 
[2025-04-12 11:26:07] 2025-04-12 15:25:51,316 | INFO     | **************************************
[2025-04-12 11:26:07] 2025-04-12 15:25:51,820 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-12 11:26:07] 2025-04-12 15:25:51,998 | INFO     | sufficient remaining disk space (73675046912 B)
[2025-04-12 11:26:07] 2025-04-12 15:25:51,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 11:26:07] 2025-04-12 15:25:51,999 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 11:26:07] 2025-04-12 15:25:51,999 | INFO     | update_server=False
[2025-04-12 11:26:07] 2025-04-12 15:25:51,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 11:26:07] 2025-04-12 15:25:52,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 11:26:07] 2025-04-12 15:25:52,007 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-12 11:26:07] 2025-04-12 15:25:52,008 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 11:26:07] 2025-04-12 15:25:52,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 11:26:07] 2025-04-12 15:25:52,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 11:26:07] 2025-04-12 15:25:52,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 11:26:07] 2025-04-12 15:25:52,491 | INFO     | all data control threads have been joined
[2025-04-12 11:26:07] 2025-04-12 15:25:52,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 11:26:07] 2025-04-12 15:25:52,544 | INFO     | aborting loop
[2025-04-12 11:26:07] 2025-04-12 15:25:53,023 | INFO     | [job] retrieve thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:53,027 | INFO     | [job] queue monitor thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:53,034 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:53,179 | INFO     | all job control threads have been joined
[2025-04-12 11:26:07] 2025-04-12 15:25:53,179 | INFO     | all payload control threads have been joined
[2025-04-12 11:26:07] 2025-04-12 15:25:53,547 | INFO     | [data] control thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:53,550 | INFO     | [job] job monitor thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:53,571 | INFO     | [payload] validate_post thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:53,836 | INFO     | [payload] failed_post thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:53,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 11:26:07] 2025-04-12 15:25:54,034 | INFO     | [data] copytool_out thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:54,071 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:54,185 | INFO     | [job] control thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:54,203 | INFO     | [payload] control thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:54,297 | INFO     | [data] copytool_in thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:54,431 | INFO     | [job] validate thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:54,441 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:54,452 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:25:57,918 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 11:26:07] 2025-04-12 15:26:00,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903248709440)>', '<ExcThread(monitor, started 139902452758272)>']
[2025-04-12 11:26:07] 2025-04-12 15:26:00,063 [wrapper] supervise_pilot (15 min periods counter: 84)
[2025-04-12 11:26:07] 2025-04-12 15:26:00,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 11:26:07] 2025-04-12 15:26:00,181 | INFO     | [monitor] control thread has ended
[2025-04-12 11:26:07] 2025-04-12 15:26:05,048 | INFO     | all workflow threads have been joined
[2025-04-12 11:26:07] 2025-04-12 15:26:05,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 11:26:07] 2025-04-12 15:26:05,049 | INFO     | traces error code: 0
[2025-04-12 11:26:07] 2025-04-12 15:26:05,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 11:26:07] 2025-04-12 15:26:05,995 [wrapper] ==== pilot stdout END ====
[2025-04-12 11:26:07] 2025-04-12 15:26:06,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 11:26:07] 2025-04-12 15:26:06,066 [wrapper] pilotpid: 3000676
[2025-04-12 11:26:07] 2025-04-12 15:26:06,069 [wrapper] Pilot exit status: 0
[2025-04-12 11:26:07] 2025-04-12 15:26:06,234 [wrapper] pandaids: 6596322581
[2025-04-12 11:26:07] 2025-04-12 15:26:06,327 [wrapper] cleanup supervisor_pilot 2419824 3000677
[2025-04-12 11:26:07] 2025-04-12 15:26:06,330 [wrapper] Test setup, not cleaning
[2025-04-12 11:26:07] 2025-04-12 15:26:06,335 [wrapper] apfmon messages muted
[2025-04-12 11:26:07] 2025-04-12 15:26:06,338 [wrapper] ==== wrapper stdout END ====
[2025-04-12 11:26:07] 2025-04-12 15:26:06,341 [wrapper] ==== wrapper stderr END ====
[2025-04-12 11:26:07]  *** Error codes and diagnostics ***
[2025-04-12 11:26:07]     "exeErrorCode": 0,
[2025-04-12 11:26:07]     "exeErrorDiag": "",
[2025-04-12 11:26:07]     "pilotErrorCode": 0,
[2025-04-12 11:26:07]     "pilotErrorDiag": "",
[2025-04-12 11:26:07]  *** Listing of results directory ***
[2025-04-12 11:26:07] total 420512
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas    495897 Apr 10 12:42 pilot3.tar.gz
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas      5111 Apr 10 12:43 queuedata.json
[2025-04-12 11:26:07] -rwx------. 1 boincer umatlas     37140 Apr 10 12:44 runpilot2-wrapper.sh
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas       100 Apr 11 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 11:26:07] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 11 14:38 run_atlas
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas       105 Apr 11 14:38 job.xml
[2025-04-12 11:26:07] -rw-r--r--. 2 boincer umatlas 220291089 Apr 11 14:38 EVNT.44075162._001142.pool.root.1
[2025-04-12 11:26:07] -rw-r--r--. 2 boincer umatlas     17569 Apr 11 14:38 start_atlas.sh
[2025-04-12 11:26:07] drwxrwx--x. 2 boincer umatlas      4096 Apr 11 14:38 shared
[2025-04-12 11:26:07] -rw-r--r--. 2 boincer umatlas    508885 Apr 11 14:38 input.tar.gz
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas         0 Apr 11 14:38 boinc_lockfile
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas      2550 Apr 11 14:39 pandaJob.out
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas       467 Apr 11 14:39 setup.sh.local
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas    986068 Apr 11 14:40 agis_schedconf.cvmfs.json
[2025-04-12 11:26:07] drwx------. 4 boincer umatlas      4096 Apr 11 14:40 pilot3
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas 196283528 Apr 12 11:19 HITS.44075164._028794.pool.root.1
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas       531 Apr 12 11:20 boinc_task_state.xml
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas      6675 Apr 12 11:21 init_data.xml
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas      1052 Apr 12 11:24 memory_monitor_summary.json
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas        95 Apr 12 11:24 pilot_heartbeat.json
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas   1603529 Apr 12 11:24 agis_ddmendpoints.agis.ALL.json
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas    809473 Apr 12 11:25 log.44075164._028794.job.log.tgz.1
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas      7746 Apr 12 11:25 heartbeat.json
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas      8192 Apr 12 11:26 boinc_mmap_file
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas        28 Apr 12 11:26 wrapper_checkpoint.txt
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas      4476 Apr 12 11:26 pilotlog.txt
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas   4281875 Apr 12 11:26 log.44075164._028794.job.log.1
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas       357 Apr 12 11:26 output.list
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas       620 Apr 12 11:26 runtime_log
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas   5109760 Apr 12 11:26 result.tar.gz
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas       659 Apr 12 11:26 YKoMDm3BAN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDnOLDmzHxKSo.diag
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas     11411 Apr 12 11:26 runtime_log.err
[2025-04-12 11:26:07] -rw-r--r--. 1 boincer umatlas     21272 Apr 12 11:26 stderr.txt
[2025-04-12 11:26:07] HITS file was successfully produced:
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas 196283528 Apr 12 11:19 shared/HITS.pool.root.1
[2025-04-12 11:26:07]  *** Contents of shared directory: ***
[2025-04-12 11:26:07] total 412336
[2025-04-12 11:26:07] -rw-r--r--. 2 boincer umatlas 220291089 Apr 11 14:38 ATLAS.root_0
[2025-04-12 11:26:07] -rw-r--r--. 2 boincer umatlas     17569 Apr 11 14:38 start_atlas.sh
[2025-04-12 11:26:07] -rw-r--r--. 2 boincer umatlas    508885 Apr 11 14:38 input.tar.gz
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas 196283528 Apr 12 11:19 HITS.pool.root.1
[2025-04-12 11:26:07] -rw-------. 1 boincer umatlas   5109760 Apr 12 11:26 result.tar.gz
11:26:08 (2989894): run_atlas exited; CPU time 57340.695970
11:26:08 (2989894): called boinc_finish(0)

</stderr_txt>
]]>

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