Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:20:28 (2852046): wrapper (7.7.26015): starting
13:20:28 (2852046): wrapper: running run_atlas (--nthreads 9)
[2025-04-11 13:20:29] Arguments: --nthreads 9
[2025-04-11 13:20:29] Threads: 9
[2025-04-11 13:20:29] Checking for CVMFS
[2025-04-11 13:20:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 13:20:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 13:20:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 13:20:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 13:20:33] 2.12.6.0 956287 70813 157492 144776 0 73 19902231 32935936 16254 130560 0 60099198 99.680 50902325 21893 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-11 13:20:33] CVMFS is ok
[2025-04-11 13:20:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 13:20:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-11 13:20:33] Further information can be found at the LHC@home message board.
[2025-04-11 13:20:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 13:20:33] Checking for apptainer binary...
[2025-04-11 13:20:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 13:20:33] Running /usr/bin/apptainer --version
[2025-04-11 13:20:34] apptainer version 1.4.0-1.el9
[2025-04-11 13:20:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 13:20:36] c-6-4.aglt2.org
[2025-04-11 13:20:36] apptainer works
[2025-04-11 13:20:36] Set ATHENA_PROC_NUMBER=9
[2025-04-11 13:20:36] Set ATHENA_CORE_NUMBER=9
[2025-04-11 13:20:37] Starting ATLAS job with PandaID=6585399652
[2025-04-11 13:20:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-12 03:49:08]  *** The last 200 lines of the pilot log: ***
[2025-04-12 03:49:08] 2025-04-12 07:48:29,095 | INFO     | mean x: 1744418018.7046263
[2025-04-12 03:49:08] 2025-04-12 07:48:29,095 | INFO     | mean y: 2938539.3048635824
[2025-04-12 03:49:08] 2025-04-12 07:48:29,095 | INFO     | -- intersect: -10063510812.597881
[2025-04-12 03:49:08] 2025-04-12 07:48:29,095 | INFO     | intersect: -10063510812.597881
[2025-04-12 03:49:08] 2025-04-12 07:48:29,097 | INFO     | chi2: 6.694774670492835
[2025-04-12 03:49:08] 2025-04-12 07:48:29,097 | INFO     | current chi2=6.694774670492835 (change=9.146391608967756 %)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,097 | INFO     | right removable region: 842
[2025-04-12 03:49:08] 2025-04-12 07:48:29,098 | INFO     | sum of square deviations: 185755107321.79608
[2025-04-12 03:49:08] 2025-04-12 07:48:29,122 | INFO     | sum of deviations: 725788655471.0015
[2025-04-12 03:49:08] 2025-04-12 07:48:29,122 | INFO     | mean x: 1744418323.7093713
[2025-04-12 03:49:08] 2025-04-12 07:48:29,122 | INFO     | mean y: 2949058.759193357
[2025-04-12 03:49:08] 2025-04-12 07:48:29,122 | INFO     | -- intersect: -6812901380.016031
[2025-04-12 03:49:08] 2025-04-12 07:48:29,123 | INFO     | intersect: -6812901380.016031
[2025-04-12 03:49:08] 2025-04-12 07:48:29,124 | INFO     | chi2: 4.337885907019591
[2025-04-12 03:49:08] 2025-04-12 07:48:29,124 | INFO     | current chi2=4.337885907019591 (change=41.131314071198894 %)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,171 | INFO     | sum of square deviations: 182468983725.90585
[2025-04-12 03:49:08] 2025-04-12 07:48:29,205 | INFO     | sum of deviations: 511961013084.69305
[2025-04-12 03:49:08] 2025-04-12 07:48:29,206 | INFO     | mean x: 1744418476.2159905
[2025-04-12 03:49:08] 2025-04-12 07:48:29,206 | INFO     | mean y: 2958980.6646778043
[2025-04-12 03:49:08] 2025-04-12 07:48:29,206 | INFO     | -- intersect: -4891430367.547611
[2025-04-12 03:49:08] 2025-04-12 07:48:29,206 | INFO     | intersect: -4891430367.547611
[2025-04-12 03:49:08] 2025-04-12 07:48:29,207 | INFO     | chi2: 2.7584852694683732
[2025-04-12 03:49:08] 2025-04-12 07:48:29,207 | INFO     | current chi2=2.7584852694683732 (change=36.409455467591314 %)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,209 | INFO     | sum of square deviations: 179221837482.94077
[2025-04-12 03:49:08] 2025-04-12 07:48:29,232 | INFO     | sum of deviations: 315581174716.48773
[2025-04-12 03:49:08] 2025-04-12 07:48:29,233 | INFO     | mean x: 1744418628.7226892
[2025-04-12 03:49:08] 2025-04-12 07:48:29,233 | INFO     | mean y: 2968203.175270108
[2025-04-12 03:49:08] 2025-04-12 07:48:29,233 | INFO     | -- intersect: -3068675787.206375
[2025-04-12 03:49:08] 2025-04-12 07:48:29,233 | INFO     | intersect: -3068675787.206375
[2025-04-12 03:49:08] 2025-04-12 07:48:29,234 | INFO     | chi2: 1.4348206155714327
[2025-04-12 03:49:08] 2025-04-12 07:48:29,234 | INFO     | current chi2=1.4348206155714327 (change=47.98519928845017 %)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,236 | INFO     | sum of square deviations: 176013487209.85837
[2025-04-12 03:49:08] 2025-04-12 07:48:29,252 | INFO     | sum of deviations: 210686565344.1196
[2025-04-12 03:49:08] 2025-04-12 07:48:29,252 | INFO     | mean x: 1744418781.2282608
[2025-04-12 03:49:08] 2025-04-12 07:48:29,252 | INFO     | mean y: 2973187.4649758455
[2025-04-12 03:49:08] 2025-04-12 07:48:29,253 | INFO     | -- intersect: -2085080446.178234
[2025-04-12 03:49:08] 2025-04-12 07:48:29,253 | INFO     | intersect: -2085080446.178234
[2025-04-12 03:49:08] 2025-04-12 07:48:29,254 | INFO     | chi2: 1.0649034973191696
[2025-04-12 03:49:08] 2025-04-12 07:48:29,254 | INFO     | current chi2=1.0649034973191696 (change=25.78141924068603 %)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,255 | INFO     | sum of square deviations: 172843799836.12003
[2025-04-12 03:49:08] 2025-04-12 07:48:29,272 | INFO     | sum of deviations: 145749760411.40448
[2025-04-12 03:49:08] 2025-04-12 07:48:29,272 | INFO     | mean x: 1744418933.7302551
[2025-04-12 03:49:08] 2025-04-12 07:48:29,272 | INFO     | mean y: 2976310.5018226
[2025-04-12 03:49:08] 2025-04-12 07:48:29,272 | INFO     | -- intersect: -1467997145.8174982
[2025-04-12 03:49:08] 2025-04-12 07:48:29,272 | INFO     | intersect: -1467997145.8174982
[2025-04-12 03:49:08] 2025-04-12 07:48:29,274 | INFO     | chi2: 0.9246429621127055
[2025-04-12 03:49:08] 2025-04-12 07:48:29,274 | INFO     | current chi2=0.9246429621127055 (change=13.171196785395253 %)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,274 | INFO     | left removable region: 50
[2025-04-12 03:49:08] 2025-04-12 07:48:29,275 | INFO     | sum of square deviations: 154038311921.7725
[2025-04-12 03:49:08] 2025-04-12 07:48:29,290 | INFO     | sum of deviations: 64595176031.15887
[2025-04-12 03:49:08] 2025-04-12 07:48:29,291 | INFO     | mean x: 1744419513.219697
[2025-04-12 03:49:08] 2025-04-12 07:48:29,291 | INFO     | mean y: 2986478.746212121
[2025-04-12 03:49:08] 2025-04-12 07:48:29,291 | INFO     | -- intersect: -728526896.8732198
[2025-04-12 03:49:08] 2025-04-12 07:48:29,291 | INFO     | intersect: -728526896.8732198
[2025-04-12 03:49:08] 2025-04-12 07:48:29,292 | INFO     | chi2: 0.04831184598083062
[2025-04-12 03:49:08] 2025-04-12 07:48:29,293 | INFO     | -- intersect: -728526896.8732198
[2025-04-12 03:49:08] 2025-04-12 07:48:29,293 | INFO     | current memory leak: 0.42 B/s (using 792 data points, chi2=0.05)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,294 | INFO     | ..............................
[2025-04-12 03:49:08] 2025-04-12 07:48:29,294 | INFO     | . Timing measurements:
[2025-04-12 03:49:08] 2025-04-12 07:48:29,294 | INFO     | . get job = 0 s
[2025-04-12 03:49:08] 2025-04-12 07:48:29,294 | INFO     | . initial setup = 10 s
[2025-04-12 03:49:08] 2025-04-12 07:48:29,294 | INFO     | . payload setup = 59 s
[2025-04-12 03:49:08] 2025-04-12 07:48:29,295 | INFO     | . stage-in = 0 s
[2025-04-12 03:49:08] 2025-04-12 07:48:29,295 | INFO     | . payload execution = 51771 s
[2025-04-12 03:49:08] 2025-04-12 07:48:29,295 | INFO     | . stage-out = 7 s
[2025-04-12 03:49:08] 2025-04-12 07:48:29,295 | INFO     | . log creation = 1 s
[2025-04-12 03:49:08] 2025-04-12 07:48:29,295 | INFO     | ..............................
[2025-04-12 03:49:08] 2025-04-12 07:48:29,465 | INFO     | 
[2025-04-12 03:49:08] 2025-04-12 07:48:29,466 | INFO     | job summary report
[2025-04-12 03:49:08] 2025-04-12 07:48:29,466 | INFO     | --------------------------------------------------
[2025-04-12 03:49:08] 2025-04-12 07:48:29,466 | INFO     | PanDA job id: 6585399652
[2025-04-12 03:49:08] 2025-04-12 07:48:29,466 | INFO     | task id: 43634898
[2025-04-12 03:49:08] 2025-04-12 07:48:29,466 | INFO     | errors: (none)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-12 03:49:08] 2025-04-12 07:48:29,466 | INFO     | pilot state: finished 
[2025-04-12 03:49:08] 2025-04-12 07:48:29,466 | INFO     | transexitcode: 0
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | exeerrorcode: 0
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | exeerrordiag: 
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | exitcode: 0
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | exitmsg: OK
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | cpuconsumptiontime: 98022 s
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | nevents: 400
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | neventsw: 0
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | pid: 2880043
[2025-04-12 03:49:08] 2025-04-12 07:48:29,467 | INFO     | pgrp: 2880043
[2025-04-12 03:49:08] 2025-04-12 07:48:29,468 | INFO     | corecount: 9
[2025-04-12 03:49:08] 2025-04-12 07:48:29,468 | INFO     | event service: False
[2025-04-12 03:49:08] 2025-04-12 07:48:29,468 | INFO     | sizes: {0: 2417229, 1: 2417428, 2: 2417428, 13: 2417456, 25: 2417512, 36: 2417540, 45: 2417902, 47: 2417930, 51835: 2464262, 51846: 2473203, 51848: 2473259, 51880:
[2025-04-12 03:49:08] 2025-04-12 07:48:29,468 | INFO     | --------------------------------------------------
[2025-04-12 03:49:08] 2025-04-12 07:48:29,468 | INFO     | 
[2025-04-12 03:49:08] 2025-04-12 07:48:29,468 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-12 03:49:08] 2025-04-12 07:48:29,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-12 03:49:08] 2025-04-12 07:48:29,586 | INFO     | job 6585399652 has completed (purged errors)
[2025-04-12 03:49:08] 2025-04-12 07:48:29,586 | INFO     | overall cleanup function is called
[2025-04-12 03:49:08] 2025-04-12 07:48:30,613 | INFO     | --- collectZombieJob: --- 10, [2880043]
[2025-04-12 03:49:08] 2025-04-12 07:48:30,614 | INFO     | zombie collector waiting for pid 2880043
[2025-04-12 03:49:08] 2025-04-12 07:48:30,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-12 03:49:08] 2025-04-12 07:48:30,614 | INFO     | collected zombie processes
[2025-04-12 03:49:08] 2025-04-12 07:48:30,614 | INFO     | will attempt to kill all subprocesses of pid=2880043
[2025-04-12 03:49:08] 2025-04-12 07:48:31,216 | INFO     | process IDs to be killed: [2880043] (in reverse order)
[2025-04-12 03:49:08] 2025-04-12 07:48:31,363 | WARNING  | found no corresponding commands to process id(s)
[2025-04-12 03:49:08] 2025-04-12 07:48:31,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-12 03:49:08] 2025-04-12 07:48:31,380 | INFO     | did not find any defunct processes belonging to 2880043
[2025-04-12 03:49:08] 2025-04-12 07:48:31,401 | INFO     | did not find any defunct processes belonging to 2880043
[2025-04-12 03:49:08] 2025-04-12 07:48:31,401 | INFO     | ready for new job
[2025-04-12 03:49:08] 2025-04-12 07:48:31,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-12 03:49:08] 2025-04-12 07:48:31,404 | INFO     | **************************************
[2025-04-12 03:49:08] 2025-04-12 07:48:31,404 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-12 03:49:08] 2025-04-12 07:48:31,404 | INFO     | **************************************
[2025-04-12 03:49:08] 2025-04-12 07:48:31,404 | INFO     | 
[2025-04-12 03:49:08] 2025-04-12 07:48:31,406 | INFO     | architecture information:
[2025-04-12 03:49:08] 2025-04-12 07:48:31,407 | INFO     | executing command: cat /etc/os-release
[2025-04-12 03:49:08] 2025-04-12 07:48:31,501 | INFO     | cat /etc/os-release:
[2025-04-12 03:49:08] NAME="CentOS Linux"
[2025-04-12 03:49:08] VERSION="7 (Core)"
[2025-04-12 03:49:08] ID="centos"
[2025-04-12 03:49:08] ID_LIKE="rhel fedora"
[2025-04-12 03:49:08] VERSION_ID="7"
[2025-04-12 03:49:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-12 03:49:08] ANSI_COLOR="0;31"
[2025-04-12 03:49:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-12 03:49:08] HOME_URL="https://www.centos.org/"
[2025-04-12 03:49:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-12 03:49:08] 
[2025-04-12 03:49:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-12 03:49:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-12 03:49:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-12 03:49:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-12 03:49:08] 
[2025-04-12 03:49:08] 2025-04-12 07:48:31,501 | INFO     | **************************************
[2025-04-12 03:49:08] 2025-04-12 07:48:31,944 | INFO     | 51984s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-12 03:49:08] 2025-04-12 07:48:32,005 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-12 03:49:08] 2025-04-12 07:48:32,158 | INFO     | sufficient remaining disk space (58614349824 B)
[2025-04-12 03:49:08] 2025-04-12 07:48:32,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-12 03:49:08] 2025-04-12 07:48:32,158 | INFO     | current server update state: UPDATING_FINAL
[2025-04-12 03:49:08] 2025-04-12 07:48:32,159 | INFO     | update_server=False
[2025-04-12 03:49:08] 2025-04-12 07:48:32,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-12 03:49:08] 2025-04-12 07:48:32,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-12 03:49:08] 2025-04-12 07:48:32,167 | INFO     | aborting loop
[2025-04-12 03:49:08] 2025-04-12 07:48:32,785 | INFO     | all job control threads have been joined
[2025-04-12 03:49:08] 2025-04-12 07:48:32,849 | INFO     | all data control threads have been joined
[2025-04-12 03:49:08] 2025-04-12 07:48:32,950 | INFO     | found 0 job(s) in 20 queues
[2025-04-12 03:49:08] 2025-04-12 07:48:32,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-12 03:49:08] 2025-04-12 07:48:32,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-12 03:49:08] 2025-04-12 07:48:32,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-12 03:49:08] 2025-04-12 07:48:33,164 | INFO     | [job] retrieve thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,174 | INFO     | [job] job monitor thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,323 | INFO     | [payload] validate_post thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,381 | INFO     | all payload control threads have been joined
[2025-04-12 03:49:08] 2025-04-12 07:48:33,442 | INFO     | [payload] failed_post thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,449 | INFO     | [payload] validate_pre thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,556 | INFO     | [data] copytool_in thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,557 | INFO     | [job] create_data_payload thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,557 | INFO     | [job] validate thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,795 | INFO     | [job] control thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,848 | INFO     | [payload] execute_payloads thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:33,857 | INFO     | [data] control thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:34,387 | INFO     | [payload] control thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:34,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-12 03:49:08] 2025-04-12 07:48:34,992 | INFO     | [data] copytool_out thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:35,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-12 03:49:08] 2025-04-12 07:48:35,446 | INFO     | [job] queue monitor thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:39,206 | INFO     | [data] queue_monitor thread has finished
[2025-04-12 03:49:08] 2025-04-12 07:48:41,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139650154235712)>', '<ExcThread(monitor, started 139649435555584)>']
[2025-04-12 03:49:08] 2025-04-12 07:48:42,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-12 03:49:08] 2025-04-12 07:48:42,006 | INFO     | [monitor] control thread has ended
[2025-04-12 03:49:08] 2025-04-12 07:48:46,198 | INFO     | all workflow threads have been joined
[2025-04-12 03:49:08] 2025-04-12 07:48:46,199 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-12 03:49:08] 2025-04-12 07:48:46,199 | INFO     | traces error code: 0
[2025-04-12 03:49:08] 2025-04-12 07:48:46,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-12 03:49:08] 2025-04-12 07:48:47,523 [wrapper] ==== pilot stdout END ====
[2025-04-12 03:49:08] 2025-04-12 07:48:47,551 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-12 03:49:08] 2025-04-12 07:48:47,587 [wrapper] pilotpid: 2858930
[2025-04-12 03:49:08] 2025-04-12 07:48:47,605 [wrapper] Pilot exit status: 0
[2025-04-12 03:49:08] 2025-04-12 07:48:47,723 [wrapper] pandaids: 6585399652
[2025-04-12 03:49:08] 2025-04-12 07:48:47,823 [wrapper] cleanup supervisor_pilot 3877419 2858931
[2025-04-12 03:49:08] 2025-04-12 07:48:47,828 [wrapper] Test setup, not cleaning
[2025-04-12 03:49:08] 2025-04-12 07:48:47,831 [wrapper] apfmon messages muted
[2025-04-12 03:49:08] 2025-04-12 07:48:47,835 [wrapper] ==== wrapper stdout END ====
[2025-04-12 03:49:08] 2025-04-12 07:48:47,844 [wrapper] ==== wrapper stderr END ====
[2025-04-12 03:49:08]  *** Error codes and diagnostics ***
[2025-04-12 03:49:08]     "exeErrorCode": 0,
[2025-04-12 03:49:08]     "exeErrorDiag": "",
[2025-04-12 03:49:08]     "pilotErrorCode": 0,
[2025-04-12 03:49:08]     "pilotErrorDiag": "",
[2025-04-12 03:49:08]  *** Listing of results directory ***
[2025-04-12 03:49:08] total 684784
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 09:40 pilot3.tar.gz
[2025-04-12 03:49:08] -rwx------. 1 boincer umatlas     37140 Apr  3 09:45 runpilot2-wrapper.sh
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 09:45 queuedata.json
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas       100 Apr 11 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-12 03:49:08] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 11 13:20 run_atlas
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas       105 Apr 11 13:20 job.xml
[2025-04-12 03:49:08] -rw-r--r--. 2 boincer umatlas 361846685 Apr 11 13:20 EVNT.43634896._000575.pool.root.1
[2025-04-12 03:49:08] drwxrwx--x. 2 boincer umatlas      4096 Apr 11 13:20 shared
[2025-04-12 03:49:08] -rw-r--r--. 2 boincer umatlas    508894 Apr 11 13:20 input.tar.gz
[2025-04-12 03:49:08] -rw-r--r--. 2 boincer umatlas     17569 Apr 11 13:20 start_atlas.sh
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas         0 Apr 11 13:20 boinc_lockfile
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas      2600 Apr 11 13:20 pandaJob.out
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas       467 Apr 11 13:20 setup.sh.local
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas    986068 Apr 11 13:22 agis_schedconf.cvmfs.json
[2025-04-12 03:49:08] drwx------. 4 boincer umatlas      4096 Apr 11 13:22 pilot3
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas 326847090 Apr 12 03:45 HITS.43634898._014931.pool.root.1
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas       533 Apr 12 03:46 boinc_task_state.xml
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas      6672 Apr 12 03:47 init_data.xml
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas      1052 Apr 12 03:47 memory_monitor_summary.json
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas        95 Apr 12 03:47 pilot_heartbeat.json
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas   1603529 Apr 12 03:47 agis_ddmendpoints.agis.ALL.json
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas    697438 Apr 12 03:47 log.43634898._014931.job.log.tgz.1
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas      7726 Apr 12 03:48 heartbeat.json
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas      4469 Apr 12 03:48 pilotlog.txt
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas   3642237 Apr 12 03:48 log.43634898._014931.job.log.1
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas       357 Apr 12 03:48 output.list
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas       620 Apr 12 03:48 runtime_log
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas   4362240 Apr 12 03:48 result.tar.gz
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas     11404 Apr 12 03:48 runtime_log.err
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas       659 Apr 12 03:48 5iGNDmA4ZK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmJ1sKDmFwR1Wm.diag
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas        29 Apr 12 03:49 wrapper_checkpoint.txt
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas      8192 Apr 12 03:49 boinc_mmap_file
[2025-04-12 03:49:08] -rw-r--r--. 1 boincer umatlas     20907 Apr 12 03:49 stderr.txt
[2025-04-12 03:49:08] HITS file was successfully produced:
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas 326847090 Apr 12 03:45 shared/HITS.pool.root.1
[2025-04-12 03:49:08]  *** Contents of shared directory: ***
[2025-04-12 03:49:08] total 677340
[2025-04-12 03:49:08] -rw-r--r--. 2 boincer umatlas 361846685 Apr 11 13:20 ATLAS.root_0
[2025-04-12 03:49:08] -rw-r--r--. 2 boincer umatlas    508894 Apr 11 13:20 input.tar.gz
[2025-04-12 03:49:08] -rw-r--r--. 2 boincer umatlas     17569 Apr 11 13:20 start_atlas.sh
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas 326847090 Apr 12 03:45 HITS.pool.root.1
[2025-04-12 03:49:08] -rw-------. 1 boincer umatlas   4362240 Apr 12 03:48 result.tar.gz
03:49:10 (2852046): run_atlas exited; CPU time 99882.656227
03:49:10 (2852046): called boinc_finish(0)

</stderr_txt>
]]>

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