Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:14:56 (645662): wrapper (7.7.26015): starting
17:14:56 (645662): wrapper: running run_atlas (--nthreads 3)
[2025-04-11 17:14:56] Arguments: --nthreads 3
[2025-04-11 17:14:56] Threads: 3
[2025-04-11 17:14:56] Checking for CVMFS
[2025-04-11 17:14:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 17:14:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 17:14:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 17:14:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 17:14:58] 2.9.2.0 645857 0 29636 144771 4 1 22248574 36864001 0 130560 0 0 0.000 1170 6923 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-11 17:14:58] CVMFS is ok
[2025-04-11 17:14:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 17:14:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-11 17:14:58] Further information can be found at the LHC@home message board.
[2025-04-11 17:14:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 17:14:58] Checking for apptainer binary...
[2025-04-11 17:14:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 17:14:58] Running /usr/bin/apptainer --version
[2025-04-11 17:14:58] apptainer version 1.3.6-4.2
[2025-04-11 17:14:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 17:14:58] atlasA217a
[2025-04-11 17:14:58] apptainer works
[2025-04-11 17:14:58] Set ATHENA_PROC_NUMBER=3
[2025-04-11 17:14:58] Set ATHENA_CORE_NUMBER=3
[2025-04-11 17:14:58] Starting ATLAS job with PandaID=6585060892
[2025-04-11 17:14:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 18:43:25]  *** The last 200 lines of the pilot log: ***
[2025-04-11 18:43:25]  scope=mc23_13p6TeV
[2025-04-11 18:43:25]  status=None
[2025-04-11 18:43:25]  status_code=0
[2025-04-11 18:43:25]  storage_token=
[2025-04-11 18:43:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6585060892/log.44004367._010116.job.log.tgz.1
[2025-04-11 18:43:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/21/log.44004367._010116.job.log.tgz.1
[2025-04-11 18:43:25]  workdir=None
[2025-04-11 18:43:25] ]
[2025-04-11 18:43:25] 2025-04-11 16:43:04,962 | INFO     | transferring file log.44004367._010116.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6585060892/log.44004367._010116.job.log.tgz.1 to /local/data/boinc/
[2025-04-11 18:43:25] 2025-04-11 16:43:04,962 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6585060892/log.44004367._010116.job.log.tgz.1 /local/data/boinc/slots/0/log.44004367._0101
[2025-04-11 18:43:25] 2025-04-11 16:43:04,975 | INFO     | adding to output.list: log.44004367._010116.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/21/log.44004367._010116.job.log.tg
[2025-04-11 18:43:25] 2025-04-11 16:43:04,976 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-11 18:43:25] 2025-04-11 16:43:04,976 | INFO     | summary of transferred files:
[2025-04-11 18:43:25] 2025-04-11 16:43:04,976 | INFO     |  -- lfn=log.44004367._010116.job.log.tgz.1, status_code=0, status=transferred
[2025-04-11 18:43:25] 2025-04-11 16:43:04,976 | INFO     | stage-out finished correctly
[2025-04-11 18:43:25] 2025-04-11 16:43:05,006 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-11 18:43:25] 2025-04-11 16:43:06,517 | INFO     | job 6585060892 has state=finished
[2025-04-11 18:43:25] 2025-04-11 16:43:06,517 | INFO     | preparing for final server update for job 6585060892 in state='finished'
[2025-04-11 18:43:25] 2025-04-11 16:43:06,518 | INFO     | this job has now completed (state=finished)
[2025-04-11 18:43:25] 2025-04-11 16:43:06,518 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-11 18:43:25] 2025-04-11 16:43:06,518 | INFO     | log transfer has been attempted: DONE
[2025-04-11 18:43:25] 2025-04-11 16:43:06,518 | INFO     | job 6585060892 has finished - writing final server update
[2025-04-11 18:43:25] 2025-04-11 16:43:06,518 | INFO     | total number of processed events: 400 (read)
[2025-04-11 18:43:25] 2025-04-11 16:43:06,519 | INFO     | executing command: lscpu
[2025-04-11 18:43:25] 2025-04-11 16:43:06,542 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-11 18:43:25] 2025-04-11 16:43:09,406 | INFO     | PID=649867 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-11 18:43:25] 2025-04-11 16:43:11,054 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-11 18:43:25] 2025-04-11 16:43:11,056 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6585060892/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,057 | INFO     | extracted standard info from prmon json
[2025-04-11 18:43:25] 2025-04-11 16:43:11,057 | INFO     | extracted standard memory fields from prmon json
[2025-04-11 18:43:25] 2025-04-11 16:43:11,058 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-11 18:43:25] 2025-04-11 16:43:11,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-11 18:43:25] 2025-04-11 16:43:11,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-11 18:43:25] 2025-04-11 16:43:11,059 | INFO     | fitting pss+swap vs Time
[2025-04-11 18:43:25] 2025-04-11 16:43:11,059 | INFO     | model: linear, x: [1744384829.0, 1744384890.0, 1744384951.0, 1744385012.0, 1744385073.0, 1744385134.0, 1744385195.0, 1744385256.0, 1744385317.0, 1744385378.0, 1744
[2025-04-11 18:43:25] 2025-04-11 16:43:11,059 | INFO     | sum of square deviations: 158737860.0
[2025-04-11 18:43:25] 2025-04-11 16:43:11,059 | INFO     | sum of deviations: 5365049643.5
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | mean x: 1744387238.5
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | mean y: 2373004.4875
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | -- intersect: -58954728546.71379
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | intersect: -58954728546.71379
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | chi2: 1.1324004139434394
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | -- intersect: -58954728546.71379
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | current memory leak: 33.80 B/s (using 80 data points, chi2=1.13)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | ..............................
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | . Timing measurements:
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | . get job = 0 s
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | . initial setup = 1 s
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | . payload setup = 2 s
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | . stage-in = 0 s
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | . payload execution = 5260 s
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | . stage-out = 0 s
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | . log creation = 0 s
[2025-04-11 18:43:25] 2025-04-11 16:43:11,060 | INFO     | ..............................
[2025-04-11 18:43:25] 2025-04-11 16:43:11,092 | INFO     | 
[2025-04-11 18:43:25] 2025-04-11 16:43:11,093 | INFO     | job summary report
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | WARNING  | process 656305 can no longer be monitored (due to stat problems) - aborting
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | --------------------------------------------------
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | PanDA job id: 6585060892
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | task id: 44004367
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | errors: (none)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | pilot state: finished 
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | transexitcode: 0
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6585060892/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | exeerrorcode: 0
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | exeerrordiag: 
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | exitcode: 0
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | exitmsg: OK
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | cpuconsumptiontime: 14125 s
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | nevents: 400
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | neventsw: 0
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | pid: 656305
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | pgrp: 656305
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | corecount: 3
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | event service: False
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | sizes: {0: 2417287, 3: 2417493, 11: 2417521, 5266: 2444043, 5267: 2453046, 5273: 2453160}
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | --------------------------------------------------
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | 
[2025-04-11 18:43:25] 2025-04-11 16:43:11,094 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-11 18:43:25] 2025-04-11 16:43:11,095 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6585060892/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,098 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2292270 B
[2025-04-11 18:43:25] 2025-04-11 16:43:11,098 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15550 B
[2025-04-11 18:43:25] 2025-04-11 16:43:11,099 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-11 18:43:25] 2025-04-11 16:43:11,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,107 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | job 6585060892 has completed (purged errors)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | overall cleanup function is called
[2025-04-11 18:43:25] 2025-04-11 16:43:11,108 | INFO     | sufficient remaining disk space (334962360320 B)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,109 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,109 | WARNING  | caught exception: [Errno 2] No such file or directory: '/local/data/boinc/slots/0/PanDA_Pilot-6585060892/SimParams.db' (skipping this file)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,109 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6585060892: 2387550 B (within 2537553920 B limit)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,109 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6585060892/HITS.44004367._010116.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,109 | INFO     | total size of present files: 0 B (workdir size: 2387550 B)
[2025-04-11 18:43:25] 2025-04-11 16:43:11,109 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6585060892/HITS.44004367._010116.pool.root.1 since it does not exist
[2025-04-11 18:43:25] 2025-04-11 16:43:11,136 | INFO     | number of running child processes to parent process 656305: 1
[2025-04-11 18:43:25] 2025-04-11 16:43:11,136 | INFO     | maximum number of monitored processes: 6
[2025-04-11 18:43:25] 2025-04-11 16:43:11,136 | INFO     | aborting job monitoring since job object (job id=6585060892) has expired
[2025-04-11 18:43:25] 2025-04-11 16:43:12,117 | INFO     | --- collectZombieJob: --- 10, [656305]
[2025-04-11 18:43:25] 2025-04-11 16:43:12,117 | INFO     | zombie collector waiting for pid 656305
[2025-04-11 18:43:25] 2025-04-11 16:43:12,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 18:43:25] 2025-04-11 16:43:12,117 | INFO     | collected zombie processes
[2025-04-11 18:43:25] 2025-04-11 16:43:12,118 | INFO     | will attempt to kill all subprocesses of pid=656305
[2025-04-11 18:43:25] 2025-04-11 16:43:12,150 | INFO     | process IDs to be killed: [656305] (in reverse order)
[2025-04-11 18:43:25] 2025-04-11 16:43:12,172 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 18:43:25] 2025-04-11 16:43:12,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 18:43:25] 2025-04-11 16:43:12,174 | INFO     | did not find any defunct processes belonging to 656305
[2025-04-11 18:43:25] 2025-04-11 16:43:12,175 | INFO     | did not find any defunct processes belonging to 656305
[2025-04-11 18:43:25] 2025-04-11 16:43:12,175 | INFO     | ready for new job
[2025-04-11 18:43:25] 2025-04-11 16:43:12,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 18:43:25] 2025-04-11 16:43:12,175 | INFO     | ***************************************
[2025-04-11 18:43:25] 2025-04-11 16:43:12,175 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-11 18:43:25] 2025-04-11 16:43:12,175 | INFO     | ***************************************
[2025-04-11 18:43:25] 2025-04-11 16:43:12,175 | INFO     | 
[2025-04-11 18:43:25] 2025-04-11 16:43:12,176 | INFO     | architecture information:
[2025-04-11 18:43:25] 2025-04-11 16:43:12,176 | INFO     | executing command: cat /etc/os-release
[2025-04-11 18:43:25] 2025-04-11 16:43:12,185 | INFO     | cat /etc/os-release:
[2025-04-11 18:43:25] NAME="CentOS Linux"
[2025-04-11 18:43:25] VERSION="7 (Core)"
[2025-04-11 18:43:25] ID="centos"
[2025-04-11 18:43:25] ID_LIKE="rhel fedora"
[2025-04-11 18:43:25] VERSION_ID="7"
[2025-04-11 18:43:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 18:43:25] ANSI_COLOR="0;31"
[2025-04-11 18:43:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 18:43:25] HOME_URL="https://www.centos.org/"
[2025-04-11 18:43:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 18:43:25] 
[2025-04-11 18:43:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 18:43:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 18:43:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 18:43:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 18:43:25] 
[2025-04-11 18:43:25] 2025-04-11 16:43:12,185 | INFO     | ***************************************
[2025-04-11 18:43:25] 2025-04-11 16:43:12,688 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-11 18:43:25] 2025-04-11 16:43:12,702 | INFO     | sufficient remaining disk space (334965506048 B)
[2025-04-11 18:43:25] 2025-04-11 16:43:12,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 18:43:25] 2025-04-11 16:43:12,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 18:43:25] 2025-04-11 16:43:12,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 18:43:25] 2025-04-11 16:43:12,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 18:43:25] 2025-04-11 16:43:12,703 | INFO     | aborting loop
[2025-04-11 18:43:25] 2025-04-11 16:43:13,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 18:43:25] 2025-04-11 16:43:13,099 | INFO     | all job control threads have been joined
[2025-04-11 18:43:25] 2025-04-11 16:43:13,203 | INFO     | all data control threads have been joined
[2025-04-11 18:43:25] 2025-04-11 16:43:13,419 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 18:43:25] 2025-04-11 16:43:13,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 18:43:25] 2025-04-11 16:43:13,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 18:43:25] 2025-04-11 16:43:13,471 | INFO     | all payload control threads have been joined
[2025-04-11 18:43:25] 2025-04-11 16:43:13,708 | INFO     | [job] retrieve thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:13,708 | INFO     | [job] queue monitor thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:13,708 | INFO     | [job] job monitor thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,102 | INFO     | [job] control thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,202 | INFO     | [job] validate thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,209 | INFO     | [data] control thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,264 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,278 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,414 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,477 | INFO     | [payload] control thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,590 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:14,673 | INFO     | [payload] failed_post thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:15,023 | INFO     | [data] copytool_out thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:15,108 | INFO     | [data] copytool_in thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:15,206 | INFO     | [payload] validate_post thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:15,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 18:43:25] 2025-04-11 16:43:19,549 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 18:43:25] 2025-04-11 16:43:20,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751964518208)>', '<ExcThread(monitor, started 139751617177344)>']
[2025-04-11 18:43:25] 2025-04-11 16:43:21,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 18:43:25] 2025-04-11 16:43:21,460 | INFO     | [monitor] control thread has ended
[2025-04-11 18:43:25] 2025-04-11 16:43:25,701 | INFO     | all workflow threads have been joined
[2025-04-11 18:43:25] 2025-04-11 16:43:25,701 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 18:43:25] 2025-04-11 16:43:25,701 | INFO     | traces error code: 0
[2025-04-11 18:43:25] 2025-04-11 16:43:25,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 18:43:25] 2025-04-11 16:43:25,753 [wrapper] ==== pilot stdout END ====
[2025-04-11 18:43:25] 2025-04-11 16:43:25,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 18:43:25] 2025-04-11 16:43:25,758 [wrapper] pilotpid: 649867
[2025-04-11 18:43:25] 2025-04-11 16:43:25,760 [wrapper] Pilot exit status: 0
[2025-04-11 18:43:25] 2025-04-11 16:43:25,767 [wrapper] pandaids: 6585060892
[2025-04-11 18:43:25] 2025-04-11 16:43:25,783 [wrapper] cleanup supervisor_pilot  668922 649868
[2025-04-11 18:43:25] 2025-04-11 16:43:25,785 [wrapper] Test setup, not cleaning
[2025-04-11 18:43:25] 2025-04-11 16:43:25,788 [wrapper] apfmon messages muted
[2025-04-11 18:43:25] 2025-04-11 16:43:25,790 [wrapper] ==== wrapper stdout END ====
[2025-04-11 18:43:25] 2025-04-11 16:43:25,792 [wrapper] ==== wrapper stderr END ====
[2025-04-11 18:43:25]  *** Error codes and diagnostics ***
[2025-04-11 18:43:25]     "exeErrorCode": 0,
[2025-04-11 18:43:25]     "exeErrorDiag": "",
[2025-04-11 18:43:25]     "pilotErrorCode": 0,
[2025-04-11 18:43:25]     "pilotErrorDiag": "",
[2025-04-11 18:43:25]  *** Listing of results directory ***
[2025-04-11 18:43:25] total 414000
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc    494584 Apr  3 13:27 pilot3.tar.gz
[2025-04-11 18:43:25] -rwx------ 1 boinc boinc     37140 Apr  3 13:36 runpilot2-wrapper.sh
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc      5111 Apr  3 13:36 queuedata.json
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc       100 Apr 11 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 18:43:25] -rwxr-xr-x 1 boinc boinc      7986 Apr 11 17:14 run_atlas
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc       105 Apr 11 17:14 job.xml
[2025-04-11 18:43:25] -rw-r--r-- 2 boinc boinc 225430196 Apr 11 17:14 EVNT.44004365._000406.pool.root.1
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc      6925 Apr 11 17:14 init_data.xml
[2025-04-11 18:43:25] drwxrwx--x 2 boinc boinc      4096 Apr 11 17:14 shared
[2025-04-11 18:43:25] -rw-r--r-- 2 boinc boinc    507236 Apr 11 17:14 input.tar.gz
[2025-04-11 18:43:25] -rw-r--r-- 2 boinc boinc     17569 Apr 11 17:14 start_atlas.sh
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc         0 Apr 11 17:14 boinc_lockfile
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc      2558 Apr 11 17:14 pandaJob.out
[2025-04-11 18:43:25] -rw------- 1 boinc boinc       424 Apr 11 17:14 setup.sh.local
[2025-04-11 18:43:25] -rw------- 1 boinc boinc    986083 Apr 11 17:15 agis_schedconf.cvmfs.json
[2025-04-11 18:43:25] -rw------- 1 boinc boinc   1603529 Apr 11 17:15 agis_ddmendpoints.agis.ALL.json
[2025-04-11 18:43:25] drwx------ 4 boinc boinc      4096 Apr 11 17:15 pilot3
[2025-04-11 18:43:25] -rw------- 1 boinc boinc        95 Apr 11 18:42 pilot_heartbeat.json
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc       529 Apr 11 18:42 boinc_task_state.xml
[2025-04-11 18:43:25] -rw------- 1 boinc boinc 193174072 Apr 11 18:42 HITS.44004367._010116.pool.root.1
[2025-04-11 18:43:25] -rw------- 1 boinc boinc      1015 Apr 11 18:43 memory_monitor_summary.json
[2025-04-11 18:43:25] -rw------- 1 boinc boinc    235772 Apr 11 18:43 log.44004367._010116.job.log.tgz.1
[2025-04-11 18:43:25] -rw------- 1 boinc boinc      7663 Apr 11 18:43 heartbeat.json
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc      8192 Apr 11 18:43 boinc_mmap_file
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc        27 Apr 11 18:43 wrapper_checkpoint.txt
[2025-04-11 18:43:25] -rw------- 1 boinc boinc      4223 Apr 11 18:43 pilotlog.txt
[2025-04-11 18:43:25] -rw------- 1 boinc boinc    508602 Apr 11 18:43 log.44004367._010116.job.log.1
[2025-04-11 18:43:25] -rw------- 1 boinc boinc       357 Apr 11 18:43 output.list
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc       620 Apr 11 18:43 runtime_log
[2025-04-11 18:43:25] -rw------- 1 boinc boinc    768000 Apr 11 18:43 result.tar.gz
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc     11119 Apr 11 18:43 runtime_log.err
[2025-04-11 18:43:25] -rw------- 1 boinc boinc       663 Apr 11 18:43 OnhMDm62XK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm3BHLDm65fNPn.diag
[2025-04-11 18:43:25] -rw-r--r-- 1 boinc boinc     22444 Apr 11 18:43 stderr.txt
[2025-04-11 18:43:25] HITS file was successfully produced:
[2025-04-11 18:43:25] -rw------- 1 boinc boinc 193174072 Apr 11 18:42 shared/HITS.pool.root.1
[2025-04-11 18:43:25]  *** Contents of shared directory: ***
[2025-04-11 18:43:25] total 410072
[2025-04-11 18:43:25] -rw-r--r-- 2 boinc boinc 225430196 Apr 11 17:14 ATLAS.root_0
[2025-04-11 18:43:25] -rw-r--r-- 2 boinc boinc    507236 Apr 11 17:14 input.tar.gz
[2025-04-11 18:43:25] -rw-r--r-- 2 boinc boinc     17569 Apr 11 17:14 start_atlas.sh
[2025-04-11 18:43:25] -rw------- 1 boinc boinc 193174072 Apr 11 18:42 HITS.pool.root.1
[2025-04-11 18:43:25] -rw------- 1 boinc boinc    768000 Apr 11 18:43 result.tar.gz
18:43:27 (645662): run_atlas exited; CPU time 14115.841478
18:43:27 (645662): called boinc_finish(0)

</stderr_txt>
]]>

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