Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:45:33 (17599): wrapper (7.7.26015): starting
09:45:33 (17599): wrapper: running run_atlas (--nthreads 8)
[2025-04-11 09:45:33] Arguments: --nthreads 8
[2025-04-11 09:45:33] Threads: 8
[2025-04-11 09:45:33] Checking for CVMFS
[2025-04-11 09:45:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 09:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 09:45:34] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 09:45:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 09:45:34] 2.11.2.0 2938 81608 125380 144768 1 1 13019279 20275201 1 130560 0 13091956 99.976 5518405 50529 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-11 09:45:34] CVMFS is ok
[2025-04-11 09:45:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 09:45:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-11 09:45:34] Further information can be found at the LHC@home message board.
[2025-04-11 09:45:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 09:45:34] Checking for apptainer binary...
[2025-04-11 09:45:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 09:45:34] Running /usr/bin/apptainer --version
[2025-04-11 09:45:34] apptainer version 1.3.2-1.el7
[2025-04-11 09:45:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 09:45:36] c-115-9.aglt2.org
[2025-04-11 09:45:36] apptainer works
[2025-04-11 09:45:36] Set ATHENA_PROC_NUMBER=8
[2025-04-11 09:45:36] Set ATHENA_CORE_NUMBER=8
[2025-04-11 09:45:36] Starting ATLAS job with PandaID=6596003917
[2025-04-11 09:45:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:12:26 (20339): wrapper (7.7.26015): starting
11:12:26 (20339): wrapper: running run_atlas (--nthreads 8)
[2025-04-11 11:12:26] Arguments: --nthreads 8
[2025-04-11 11:12:26] Threads: 8
[2025-04-11 11:12:26] This job has been restarted, cleaning up previous attempt
[2025-04-11 11:12:26] Checking for CVMFS
[2025-04-11 11:12:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 11:12:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 11:12:26] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 11:12:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 11:12:27] 2.11.2.0 2938 81695 124892 144771 3 17 13163223 20275200 1 130560 0 13161883 99.976 5583390 50470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-11 11:12:27] CVMFS is ok
[2025-04-11 11:12:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 11:12:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-11 11:12:27] Further information can be found at the LHC@home message board.
[2025-04-11 11:12:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 11:12:27] Checking for apptainer binary...
[2025-04-11 11:12:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 11:12:27] Running /usr/bin/apptainer --version
[2025-04-11 11:12:27] apptainer version 1.3.2-1.el7
[2025-04-11 11:12:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 11:12:28] c-115-9.aglt2.org
[2025-04-11 11:12:28] apptainer works
[2025-04-11 11:12:28] Set ATHENA_PROC_NUMBER=8
[2025-04-11 11:12:28] Set ATHENA_CORE_NUMBER=8
[2025-04-11 11:12:28] Starting ATLAS job with PandaID=6596003917
[2025-04-11 11:12:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 13:16:23]  *** The last 200 lines of the pilot log: ***
[2025-04-11 13:16:23] 2025-04-11 17:16:02,035 | INFO     | mean x: 1744388054.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,035 | INFO     | mean y: 2392577.859504132
[2025-04-11 13:16:23] 2025-04-11 17:16:02,035 | INFO     | -- intersect: -186085992803.86908
[2025-04-11 13:16:23] 2025-04-11 17:16:02,035 | INFO     | intersect: -186085992803.86908
[2025-04-11 13:16:23] 2025-04-11 17:16:02,035 | INFO     | chi2: 4.814173604432269
[2025-04-11 13:16:23] 2025-04-11 17:16:02,036 | INFO     | sum of square deviations: 483971865.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,036 | INFO     | sum of deviations: 56130945748.5
[2025-04-11 13:16:23] 2025-04-11 17:16:02,036 | INFO     | mean x: 1744387901.5
[2025-04-11 13:16:23] 2025-04-11 17:16:02,036 | INFO     | mean y: 2386815.7844827585
[2025-04-11 13:16:23] 2025-04-11 17:16:02,037 | INFO     | -- intersect: -202311321365.24017
[2025-04-11 13:16:23] 2025-04-11 17:16:02,037 | INFO     | intersect: -202311321365.24017
[2025-04-11 13:16:23] 2025-04-11 17:16:02,037 | INFO     | chi2: 4.799133791397688
[2025-04-11 13:16:23] 2025-04-11 17:16:02,037 | INFO     | current chi2=4.799133791397688 (change=0.3124069522697328 %)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,037 | INFO     | right removable region: 115
[2025-04-11 13:16:23] 2025-04-11 17:16:02,037 | INFO     | sum of square deviations: 483971865.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,038 | INFO     | sum of deviations: 27815763655.5
[2025-04-11 13:16:23] 2025-04-11 17:16:02,038 | INFO     | mean x: 1744388206.5
[2025-04-11 13:16:23] 2025-04-11 17:16:02,038 | INFO     | mean y: 2464156.7155172415
[2025-04-11 13:16:23] 2025-04-11 17:16:02,038 | INFO     | -- intersect: -100254376342.5675
[2025-04-11 13:16:23] 2025-04-11 17:16:02,038 | INFO     | intersect: -100254376342.5675
[2025-04-11 13:16:23] 2025-04-11 17:16:02,039 | INFO     | chi2: 2.0032016528508723
[2025-04-11 13:16:23] 2025-04-11 17:16:02,039 | INFO     | current chi2=2.0032016528508723 (change=58.38950113875031 %)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,039 | INFO     | sum of square deviations: 424045160.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,039 | INFO     | sum of deviations: 2229397621.999998
[2025-04-11 13:16:23] 2025-04-11 17:16:02,040 | INFO     | mean x: 1744388359.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,040 | INFO     | mean y: 2529318.828828829
[2025-04-11 13:16:23] 2025-04-11 17:16:02,040 | INFO     | -- intersect: -9168511000.082201
[2025-04-11 13:16:23] 2025-04-11 17:16:02,040 | INFO     | intersect: -9168511000.082201
[2025-04-11 13:16:23] 2025-04-11 17:16:02,040 | INFO     | chi2: 0.19094420007625656
[2025-04-11 13:16:23] 2025-04-11 17:16:02,040 | INFO     | current chi2=0.19094420007625656 (change=90.46804899524156 %)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,041 | INFO     | sum of square deviations: 369281342.5
[2025-04-11 13:16:23] 2025-04-11 17:16:02,041 | INFO     | sum of deviations: -4522210081.5
[2025-04-11 13:16:23] 2025-04-11 17:16:02,041 | INFO     | mean x: 1744388511.5
[2025-04-11 13:16:23] 2025-04-11 17:16:02,041 | INFO     | mean y: 2547851.5566037735
[2025-04-11 13:16:23] 2025-04-11 17:16:02,041 | INFO     | -- intersect: 21364285921.9225
[2025-04-11 13:16:23] 2025-04-11 17:16:02,042 | INFO     | intersect: 21364285921.9225
[2025-04-11 13:16:23] 2025-04-11 17:16:02,042 | INFO     | chi2: 0.010207456112780117
[2025-04-11 13:16:23] 2025-04-11 17:16:02,042 | INFO     | current chi2=0.010207456112780117 (change=94.65422039071959 %)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,042 | INFO     | sum of square deviations: 319447850.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,043 | INFO     | sum of deviations: -4623185668.999998
[2025-04-11 13:16:23] 2025-04-11 17:16:02,043 | INFO     | mean x: 1744388664.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,043 | INFO     | mean y: 2548143.801980198
[2025-04-11 13:16:23] 2025-04-11 17:16:02,043 | INFO     | -- intersect: 25248085631.598038
[2025-04-11 13:16:23] 2025-04-11 17:16:02,043 | INFO     | intersect: 25248085631.598038
[2025-04-11 13:16:23] 2025-04-11 17:16:02,043 | INFO     | chi2: 0.008294508734498206
[2025-04-11 13:16:23] 2025-04-11 17:16:02,043 | INFO     | current chi2=0.008294508734498206 (change=18.740686779802356 %)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,043 | INFO     | left removable region: 40
[2025-04-11 13:16:23] 2025-04-11 17:16:02,044 | INFO     | sum of square deviations: 130793150.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,044 | INFO     | sum of deviations: -2547337369.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,044 | INFO     | mean x: 1744389091.0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,044 | INFO     | mean y: 2541577.6533333333
[2025-04-11 13:16:23] 2025-04-11 17:16:02,044 | INFO     | -- intersect: 33976396611.959347
[2025-04-11 13:16:23] 2025-04-11 17:16:02,044 | INFO     | intersect: 33976396611.959347
[2025-04-11 13:16:23] 2025-04-11 17:16:02,045 | INFO     | chi2: 0.006749094348566734
[2025-04-11 13:16:23] 2025-04-11 17:16:02,045 | INFO     | -- intersect: 33976396611.959347
[2025-04-11 13:16:23] 2025-04-11 17:16:02,045 | INFO     | current memory leak: -19.48 B/s (using 75 data points, chi2=0.01)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,045 | INFO     | ..............................
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | . Timing measurements:
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | . get job = 0 s
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | . initial setup = 1 s
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | . payload setup = 9 s
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | . stage-in = 0 s
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | . payload execution = 7359 s
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | . stage-out = 2 s
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | . log creation = 0 s
[2025-04-11 13:16:23] 2025-04-11 17:16:02,046 | INFO     | ..............................
[2025-04-11 13:16:23] 2025-04-11 17:16:02,351 | INFO     | PID=24049 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-11 13:16:23] 2025-04-11 17:16:02,535 | INFO     | 
[2025-04-11 13:16:23] 2025-04-11 17:16:02,535 | INFO     | job summary report
[2025-04-11 13:16:23] 2025-04-11 17:16:02,535 | INFO     | --------------------------------------------------
[2025-04-11 13:16:23] 2025-04-11 17:16:02,535 | INFO     | PanDA job id: 6596003917
[2025-04-11 13:16:23] 2025-04-11 17:16:02,535 | INFO     | task id: 44075164
[2025-04-11 13:16:23] 2025-04-11 17:16:02,536 | INFO     | errors: (none)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 13:16:23] 2025-04-11 17:16:02,536 | INFO     | pilot state: finished 
[2025-04-11 13:16:23] 2025-04-11 17:16:02,536 | INFO     | transexitcode: 0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,536 | INFO     | exeerrorcode: 0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,537 | INFO     | exeerrordiag: 
[2025-04-11 13:16:23] 2025-04-11 17:16:02,537 | INFO     | exitcode: 0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,537 | INFO     | exitmsg: OK
[2025-04-11 13:16:23] 2025-04-11 17:16:02,537 | INFO     | cpuconsumptiontime: 51076 s
[2025-04-11 13:16:23] 2025-04-11 17:16:02,537 | INFO     | nevents: 400
[2025-04-11 13:16:23] 2025-04-11 17:16:02,537 | INFO     | neventsw: 0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,538 | INFO     | pid: 30466
[2025-04-11 13:16:23] 2025-04-11 17:16:02,538 | INFO     | pgrp: 30466
[2025-04-11 13:16:23] 2025-04-11 17:16:02,538 | INFO     | corecount: 8
[2025-04-11 13:16:23] 2025-04-11 17:16:02,538 | INFO     | event service: False
[2025-04-11 13:16:23] 2025-04-11 17:16:02,538 | INFO     | sizes: {0: 2416499, 1: 2417355, 7: 2417561, 12: 2417589, 7372: 2444778, 7375: 2453719, 7377: 2453903, 7383: 2454073}
[2025-04-11 13:16:23] 2025-04-11 17:16:02,539 | INFO     | --------------------------------------------------
[2025-04-11 13:16:23] 2025-04-11 17:16:02,539 | INFO     | 
[2025-04-11 13:16:23] 2025-04-11 17:16:02,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-11 13:16:23] 2025-04-11 17:16:02,567 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,568 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,568 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,568 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,572 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 13:16:23] 2025-04-11 17:16:02,572 | INFO     | job 6596003917 has completed (purged errors)
[2025-04-11 13:16:23] 2025-04-11 17:16:02,572 | INFO     | overall cleanup function is called
[2025-04-11 13:16:23] 2025-04-11 17:16:03,580 | INFO     | --- collectZombieJob: --- 10, [30466]
[2025-04-11 13:16:23] 2025-04-11 17:16:03,580 | INFO     | zombie collector waiting for pid 30466
[2025-04-11 13:16:23] 2025-04-11 17:16:03,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 13:16:23] 2025-04-11 17:16:03,581 | INFO     | collected zombie processes
[2025-04-11 13:16:23] 2025-04-11 17:16:03,581 | INFO     | will attempt to kill all subprocesses of pid=30466
[2025-04-11 13:16:23] 2025-04-11 17:16:03,673 | INFO     | process IDs to be killed: [30466] (in reverse order)
[2025-04-11 13:16:23] 2025-04-11 17:16:03,726 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 13:16:23] 2025-04-11 17:16:03,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 13:16:23] 2025-04-11 17:16:03,732 | INFO     | did not find any defunct processes belonging to 30466
[2025-04-11 13:16:23] 2025-04-11 17:16:03,735 | INFO     | did not find any defunct processes belonging to 30466
[2025-04-11 13:16:23] 2025-04-11 17:16:03,735 | INFO     | ready for new job
[2025-04-11 13:16:23] 2025-04-11 17:16:03,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 13:16:23] 2025-04-11 17:16:03,737 | INFO     | **************************************
[2025-04-11 13:16:23] 2025-04-11 17:16:03,737 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-11 13:16:23] 2025-04-11 17:16:03,737 | INFO     | **************************************
[2025-04-11 13:16:23] 2025-04-11 17:16:03,737 | INFO     | 
[2025-04-11 13:16:23] 2025-04-11 17:16:03,738 | INFO     | architecture information:
[2025-04-11 13:16:23] 2025-04-11 17:16:03,738 | INFO     | executing command: cat /etc/os-release
[2025-04-11 13:16:23] 2025-04-11 17:16:03,757 | INFO     | cat /etc/os-release:
[2025-04-11 13:16:23] NAME="CentOS Linux"
[2025-04-11 13:16:23] VERSION="7 (Core)"
[2025-04-11 13:16:23] ID="centos"
[2025-04-11 13:16:23] ID_LIKE="rhel fedora"
[2025-04-11 13:16:23] VERSION_ID="7"
[2025-04-11 13:16:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 13:16:23] ANSI_COLOR="0;31"
[2025-04-11 13:16:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 13:16:23] HOME_URL="https://www.centos.org/"
[2025-04-11 13:16:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 13:16:23] 
[2025-04-11 13:16:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 13:16:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 13:16:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 13:16:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 13:16:23] 
[2025-04-11 13:16:23] 2025-04-11 17:16:03,757 | INFO     | **************************************
[2025-04-11 13:16:23] 2025-04-11 17:16:04,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-11 13:16:23] 2025-04-11 17:16:04,281 | INFO     | sufficient remaining disk space (18635292672 B)
[2025-04-11 13:16:23] 2025-04-11 17:16:04,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 13:16:23] 2025-04-11 17:16:04,282 | INFO     | current server update state: UPDATING_FINAL
[2025-04-11 13:16:23] 2025-04-11 17:16:04,282 | INFO     | update_server=False
[2025-04-11 13:16:23] 2025-04-11 17:16:04,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 13:16:23] 2025-04-11 17:16:04,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 13:16:23] 2025-04-11 17:16:04,357 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 13:16:23] 2025-04-11 17:16:04,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 13:16:23] 2025-04-11 17:16:04,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 13:16:23] 2025-04-11 17:16:04,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 13:16:23] 2025-04-11 17:16:04,518 | INFO     | aborting loop
[2025-04-11 13:16:23] 2025-04-11 17:16:04,970 | INFO     | all payload control threads have been joined
[2025-04-11 13:16:23] 2025-04-11 17:16:05,288 | INFO     | [job] retrieve thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:05,300 | INFO     | all data control threads have been joined
[2025-04-11 13:16:23] 2025-04-11 17:16:05,306 | INFO     | [data] copytool_in thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:05,314 | INFO     | [job] validate thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:05,318 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:05,363 | INFO     | all job control threads have been joined
[2025-04-11 13:16:23] 2025-04-11 17:16:05,519 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:05,524 | INFO     | [job] job monitor thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:05,976 | INFO     | [payload] control thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:06,016 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:06,289 | INFO     | [data] copytool_out thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:06,306 | INFO     | [data] control thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:06,369 | INFO     | [job] control thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:06,516 | INFO     | [payload] validate_post thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:06,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 13:16:23] 2025-04-11 17:16:06,829 | INFO     | [payload] failed_post thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:07,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 13:16:23] 2025-04-11 17:16:08,148 | INFO     | [job] queue monitor thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:10,612 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:14,665 | INFO     | job.realtimelogging is not enabled
[2025-04-11 13:16:23] 2025-04-11 17:16:15,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 13:16:23] 2025-04-11 17:16:17,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116168918848)>', '<ExcThread(monitor, started 140115489830656)>']
[2025-04-11 13:16:23] 2025-04-11 17:16:18,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 13:16:23] 2025-04-11 17:16:18,418 | INFO     | [monitor] control thread has ended
[2025-04-11 13:16:23] 2025-04-11 17:16:22,735 | INFO     | all workflow threads have been joined
[2025-04-11 13:16:23] 2025-04-11 17:16:22,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 13:16:23] 2025-04-11 17:16:22,736 | INFO     | traces error code: 0
[2025-04-11 13:16:23] 2025-04-11 17:16:22,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 13:16:23] 2025-04-11 17:16:22,851 [wrapper] ==== pilot stdout END ====
[2025-04-11 13:16:23] 2025-04-11 17:16:22,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 13:16:23] 2025-04-11 17:16:22,860 [wrapper] pilotpid: 24049
[2025-04-11 13:16:23] 2025-04-11 17:16:22,865 [wrapper] Pilot exit status: 0
[2025-04-11 13:16:23] 2025-04-11 17:16:22,882 [wrapper] pandaids: 6596003917 6596003917
[2025-04-11 13:16:23] 2025-04-11 17:16:22,926 [wrapper] cleanup supervisor_pilot 10356 24050
[2025-04-11 13:16:23] 2025-04-11 17:16:22,931 [wrapper] Test setup, not cleaning
[2025-04-11 13:16:23] 2025-04-11 17:16:22,936 [wrapper] apfmon messages muted
[2025-04-11 13:16:23] 2025-04-11 17:16:22,940 [wrapper] ==== wrapper stdout END ====
[2025-04-11 13:16:23] 2025-04-11 17:16:22,945 [wrapper] ==== wrapper stderr END ====
[2025-04-11 13:16:23]  *** Error codes and diagnostics ***
[2025-04-11 13:16:23]     "exeErrorCode": 0,
[2025-04-11 13:16:23]     "exeErrorDiag": "",
[2025-04-11 13:16:23]     "pilotErrorCode": 0,
[2025-04-11 13:16:23]     "pilotErrorDiag": "",
[2025-04-11 13:16:23]  *** Listing of results directory ***
[2025-04-11 13:16:23] total 622932
[2025-04-11 13:16:23] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas    495897 Apr 10 10:02 pilot3.tar.gz
[2025-04-11 13:16:23] -rwx------ 1 boincer umatlas     37140 Apr 10 10:02 runpilot2-wrapper.sh
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas      5111 Apr 10 10:02 queuedata.json
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas       100 Apr 11 09:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 13:16:23] -rwxr-xr-x 1 boincer umatlas      7986 Apr 11 09:45 run_atlas
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas       105 Apr 11 09:45 job.xml
[2025-04-11 13:16:23] -rw-r--r-- 3 boincer umatlas 218888438 Apr 11 09:45 EVNT.44075162._001076.pool.root.1
[2025-04-11 13:16:23] -rw-r--r-- 3 boincer umatlas 218888438 Apr 11 09:45 ATLAS.root_0
[2025-04-11 13:16:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 11 09:45 start_atlas.sh
[2025-04-11 13:16:23] drwxrwx--x 2 boincer umatlas      4096 Apr 11 09:45 shared
[2025-04-11 13:16:23] -rw-r--r-- 2 boincer umatlas    508874 Apr 11 09:45 input.tar.gz
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas         0 Apr 11 09:45 boinc_lockfile
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas      2550 Apr 11 11:12 pandaJob.out
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas       424 Apr 11 11:12 setup.sh.local
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas    986083 Apr 11 11:12 agis_schedconf.cvmfs.json
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas      5825 Apr 11 13:12 init_data.xml
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas        96 Apr 11 13:15 pilot_heartbeat.json
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas 194212031 Apr 11 13:15 HITS.44075164._027115.pool.root.1
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas      1049 Apr 11 13:15 memory_monitor_summary.json
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas   1603529 Apr 11 13:15 agis_ddmendpoints.agis.ALL.json
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas    342174 Apr 11 13:15 log.44075164._027115.job.log.tgz.1
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas       530 Apr 11 13:15 boinc_task_state.xml
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas      7746 Apr 11 13:16 heartbeat.json
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas        28 Apr 11 13:16 wrapper_checkpoint.txt
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas      8192 Apr 11 13:16 boinc_mmap_file
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas      4425 Apr 11 13:16 pilotlog.txt
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas    684510 Apr 11 13:16 log.44075164._027115.job.log.1
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas       357 Apr 11 13:16 output.list
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas       620 Apr 11 13:16 runtime_log
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas   1044480 Apr 11 13:16 result.tar.gz
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas       784 Apr 11 13:16 zbPODmJf7M7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXTOLDm9q9GCo.diag
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas     11093 Apr 11 13:16 runtime_log.err
[2025-04-11 13:16:23] -rw-r--r-- 1 boincer umatlas     22946 Apr 11 13:16 stderr.txt
[2025-04-11 13:16:23] HITS file was successfully produced:
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas 194212031 Apr 11 13:15 shared/HITS.pool.root.1
[2025-04-11 13:16:23]  *** Contents of shared directory: ***
[2025-04-11 13:16:23] total 404964
[2025-04-11 13:16:23] -rw-r--r-- 3 boincer umatlas 218888438 Apr 11 09:45 ATLAS.root_0
[2025-04-11 13:16:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 11 09:45 start_atlas.sh
[2025-04-11 13:16:23] -rw-r--r-- 2 boincer umatlas    508874 Apr 11 09:45 input.tar.gz
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas 194212031 Apr 11 13:15 HITS.pool.root.1
[2025-04-11 13:16:23] -rw------- 1 boincer umatlas   1044480 Apr 11 13:16 result.tar.gz
13:16:24 (20339): run_atlas exited; CPU time 51048.702522
13:16:24 (20339): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN