Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:46:25 (15649): wrapper (7.7.26015): starting
00:46:25 (15649): wrapper: running run_atlas (--nthreads 8)
[2025-04-11 00:46:25] Arguments: --nthreads 8
[2025-04-11 00:46:25] Threads: 8
[2025-04-11 00:46:25] Checking for CVMFS
[2025-04-11 00:46:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 00:46:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 00:46:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 00:46:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 00:46:33] 2.11.2.0 44558 30509 394032 144751 0 311 12691245 18432000 16984 130560 0 131194849 98.930 323084963 36619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-11 00:46:33] CVMFS is ok
[2025-04-11 00:46:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 00:46:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-11 00:46:33] Further information can be found at the LHC@home message board.
[2025-04-11 00:46:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 00:46:33] Checking for apptainer binary...
[2025-04-11 00:46:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 00:46:33] Running /usr/bin/apptainer --version
[2025-04-11 00:46:34] apptainer version 1.3.2-1.el7
[2025-04-11 00:46:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 00:47:30] c-211-12.aglt2.org
[2025-04-11 00:47:30] apptainer works
[2025-04-11 00:47:30] Set ATHENA_PROC_NUMBER=8
[2025-04-11 00:47:30] Set ATHENA_CORE_NUMBER=8
[2025-04-11 00:47:31] Starting ATLAS job with PandaID=6595181487
[2025-04-11 00:47:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 19:59:08]  *** The last 200 lines of the pilot log: ***
[2025-04-11 19:59:08] 2025-04-11 23:58:30,188 | INFO     | monitor loop #2907: job 0:6595181487 is in state 'finished'
[2025-04-11 19:59:08] 2025-04-11 23:58:30,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:59:08] 2025-04-11 23:58:32,720 | INFO     | monitor loop #2908: job 0:6595181487 is in state 'finished'
[2025-04-11 19:59:08] 2025-04-11 23:58:32,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:59:08] 2025-04-11 23:58:35,271 | INFO     | monitor loop #2909: job 0:6595181487 is in state 'finished'
[2025-04-11 19:59:08] 2025-04-11 23:58:35,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:59:08] 2025-04-11 23:58:37,803 | INFO     | monitor loop #2910: job 0:6595181487 is in state 'finished'
[2025-04-11 19:59:08] 2025-04-11 23:58:37,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:59:08] 2025-04-11 23:58:39,705 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-11 19:59:08] 2025-04-11 23:58:39,705 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6595181487/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 19:59:08] 2025-04-11 23:58:39,706 | INFO     | extracted standard info from prmon json
[2025-04-11 19:59:08] 2025-04-11 23:58:39,706 | INFO     | extracted standard memory fields from prmon json
[2025-04-11 19:59:08] 2025-04-11 23:58:39,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-11 19:59:08] 2025-04-11 23:58:39,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-11 19:59:08] 2025-04-11 23:58:39,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-11 19:59:08] 2025-04-11 23:58:39,757 | INFO     | fitting pss+swap vs Time
[2025-04-11 19:59:08] 2025-04-11 23:58:39,759 | INFO     | sum of square deviations: 430995061089.41583
[2025-04-11 19:59:08] 2025-04-11 23:58:40,094 | INFO     | sum of deviations: 3189312169862.5024
[2025-04-11 19:59:08] 2025-04-11 23:58:40,094 | INFO     | mean x: 1744381772.4175627
[2025-04-11 19:59:08] 2025-04-11 23:58:40,094 | INFO     | mean y: 2389844.913082437
[2025-04-11 19:59:08] 2025-04-11 23:58:40,094 | INFO     | -- intersect: -12905827714.692446
[2025-04-11 19:59:08] 2025-04-11 23:58:40,094 | INFO     | intersect: -12905827714.692446
[2025-04-11 19:59:08] 2025-04-11 23:58:40,096 | INFO     | chi2: 26.147948230645685
[2025-04-11 19:59:08] 2025-04-11 23:58:40,138 | INFO     | sum of square deviations: 425228023660.38135
[2025-04-11 19:59:08] 2025-04-11 23:58:40,345 | INFO     | monitor loop #2911: job 0:6595181487 is in state 'finished'
[2025-04-11 19:59:08] 2025-04-11 23:58:40,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:59:08] 2025-04-11 23:58:41,312 | INFO     | sum of deviations: 3405645270406.595
[2025-04-11 19:59:08] 2025-04-11 23:58:41,312 | INFO     | mean x: 1744381619.9171917
[2025-04-11 19:59:08] 2025-04-11 23:58:41,313 | INFO     | mean y: 2395554.702070207
[2025-04-11 19:59:08] 2025-04-11 23:58:41,313 | INFO     | -- intersect: -13968332344.454218
[2025-04-11 19:59:08] 2025-04-11 23:58:41,418 | INFO     | intersect: -13968332344.454218
[2025-04-11 19:59:08] 2025-04-11 23:58:41,492 | INFO     | chi2: 23.711621822077387
[2025-04-11 19:59:08] 2025-04-11 23:58:41,493 | INFO     | current chi2=23.711621822077387 (change=9.317466850851789 %)
[2025-04-11 19:59:08] 2025-04-11 23:58:41,504 | INFO     | right removable region: 1110
[2025-04-11 19:59:08] 2025-04-11 23:58:41,515 | INFO     | sum of square deviations: 425227738310.1872
[2025-04-11 19:59:08] 2025-04-11 23:58:42,175 | INFO     | sum of deviations: 2789619003929.33
[2025-04-11 19:59:08] 2025-04-11 23:58:42,175 | INFO     | mean x: 1744381924.9216921
[2025-04-11 19:59:08] 2025-04-11 23:58:42,175 | INFO     | mean y: 2400413.5211521154
[2025-04-11 19:59:08] 2025-04-11 23:58:42,175 | INFO     | -- intersect: -11441257959.307531
[2025-04-11 19:59:08] 2025-04-11 23:58:42,175 | INFO     | intersect: -11441257959.307531
[2025-04-11 19:59:08] 2025-04-11 23:58:42,196 | INFO     | chi2: 20.838211225340583
[2025-04-11 19:59:08] 2025-04-11 23:58:42,197 | INFO     | current chi2=20.838211225340583 (change=20.30651490690207 %)
[2025-04-11 19:59:08] 2025-04-11 23:58:42,197 | INFO     | left removable region: 10
[2025-04-11 19:59:08] 2025-04-11 23:58:42,203 | INFO     | sum of square deviations: 412721611135.0353
[2025-04-11 19:59:08] 2025-04-11 23:58:42,380 | INFO     | sum of deviations: 2658454112612.637
[2025-04-11 19:59:08] 2025-04-11 23:58:42,380 | INFO     | mean x: 1744381894.4263637
[2025-04-11 19:59:08] 2025-04-11 23:58:42,380 | INFO     | mean y: 2415438.557272727
[2025-04-11 19:59:08] 2025-04-11 23:58:42,380 | INFO     | -- intersect: -11233631078.249737
[2025-04-11 19:59:08] 2025-04-11 23:58:42,380 | INFO     | intersect: -11233631078.249737
[2025-04-11 19:59:08] 2025-04-11 23:58:42,391 | INFO     | chi2: 14.506988253121092
[2025-04-11 19:59:08] 2025-04-11 23:58:42,391 | INFO     | -- intersect: -11233631078.249737
[2025-04-11 19:59:08] 2025-04-11 23:58:42,392 | INFO     | current memory leak: 6.44 B/s (using 1100 data points, chi2=14.51)
[2025-04-11 19:59:08] 2025-04-11 23:58:42,402 | INFO     | ..............................
[2025-04-11 19:59:08] 2025-04-11 23:58:42,402 | INFO     | . Timing measurements:
[2025-04-11 19:59:08] 2025-04-11 23:58:42,402 | INFO     | . get job = 2 s
[2025-04-11 19:59:08] 2025-04-11 23:58:42,402 | INFO     | . initial setup = 26 s
[2025-04-11 19:59:08] 2025-04-11 23:58:42,402 | INFO     | . payload setup = 198 s
[2025-04-11 19:59:08] 2025-04-11 23:58:42,402 | INFO     | . stage-in = 1 s
[2025-04-11 19:59:08] 2025-04-11 23:58:42,402 | INFO     | . payload execution = 68238 s
[2025-04-11 19:59:08] 2025-04-11 23:58:42,403 | INFO     | . stage-out = 9 s
[2025-04-11 19:59:08] 2025-04-11 23:58:42,403 | INFO     | . log creation = 2 s
[2025-04-11 19:59:08] 2025-04-11 23:58:42,403 | INFO     | ..............................
[2025-04-11 19:59:08] 2025-04-11 23:58:43,006 | INFO     | 
[2025-04-11 19:59:08] 2025-04-11 23:58:43,006 | INFO     | job summary report
[2025-04-11 19:59:08] 2025-04-11 23:58:43,006 | INFO     | --------------------------------------------------
[2025-04-11 19:59:08] 2025-04-11 23:58:43,006 | INFO     | PanDA job id: 6595181487
[2025-04-11 19:59:08] 2025-04-11 23:58:43,006 | INFO     | task id: 44075483
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | errors: (none)
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | pilot state: finished 
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | transexitcode: 0
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | exeerrorcode: 0
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | exeerrordiag: 
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | exitcode: 0
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | exitmsg: OK
[2025-04-11 19:59:08] 2025-04-11 23:58:43,007 | INFO     | cpuconsumptiontime: 60775 s
[2025-04-11 19:59:08] 2025-04-11 23:58:43,008 | INFO     | nevents: 400
[2025-04-11 19:59:08] 2025-04-11 23:58:43,008 | INFO     | neventsw: 0
[2025-04-11 19:59:08] 2025-04-11 23:58:43,008 | INFO     | pid: 2020
[2025-04-11 19:59:08] 2025-04-11 23:58:43,008 | INFO     | pgrp: 2020
[2025-04-11 19:59:08] 2025-04-11 23:58:43,008 | INFO     | corecount: 8
[2025-04-11 19:59:08] 2025-04-11 23:58:43,008 | INFO     | event service: False
[2025-04-11 19:59:08] 2025-04-11 23:58:43,008 | INFO     | sizes: {0: 2416428, 2: 2417029, 3: 2417113, 4: 2417141, 5: 2417396, 6: 2417396, 7: 2417552, 20: 2417580, 32: 2417608, 44: 2417636, 55: 2417664, 67: 2417972, 78: 24
[2025-04-11 19:59:08] 2025-04-11 23:58:43,008 | INFO     | --------------------------------------------------
[2025-04-11 19:59:08] 2025-04-11 23:58:43,009 | INFO     | 
[2025-04-11 19:59:08] 2025-04-11 23:58:43,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-11 19:59:08] 2025-04-11 23:58:43,284 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,285 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,285 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,285 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 19:59:08] 2025-04-11 23:58:43,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 19:59:08] 2025-04-11 23:58:43,298 | INFO     | job 6595181487 has completed (purged errors)
[2025-04-11 19:59:08] 2025-04-11 23:58:43,298 | INFO     | overall cleanup function is called
[2025-04-11 19:59:08] 2025-04-11 23:58:44,404 | INFO     | --- collectZombieJob: --- 10, [2020]
[2025-04-11 19:59:08] 2025-04-11 23:58:44,405 | INFO     | zombie collector waiting for pid 2020
[2025-04-11 19:59:08] 2025-04-11 23:58:44,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 19:59:08] 2025-04-11 23:58:44,405 | INFO     | collected zombie processes
[2025-04-11 19:59:08] 2025-04-11 23:58:44,405 | INFO     | will attempt to kill all subprocesses of pid=2020
[2025-04-11 19:59:08] 2025-04-11 23:58:44,405 | INFO     | killing group process 20970
[2025-04-11 19:59:08] 2025-04-11 23:58:44,405 | WARNING  | exception thrown when killing child group process under SIGTERM: [Errno 1] Operation not permitted
[2025-04-11 19:59:08] 2025-04-11 23:58:44,406 | WARNING  | exception thrown when killing child group process with SIGKILL: [Errno 1] Operation not permitted
[2025-04-11 19:59:08] 2025-04-11 23:58:45,355 | INFO     | PID=46675 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-11 19:59:08] 2025-04-11 23:58:45,374 | INFO     | .. there are 48 such processes running
[2025-04-11 19:59:08] 2025-04-11 23:58:46,963 | INFO     | process IDs to be killed: [2020] (in reverse order)
[2025-04-11 19:59:08] 2025-04-11 23:58:48,084 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 19:59:08] 2025-04-11 23:58:48,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 19:59:08] 2025-04-11 23:58:48,150 | INFO     | did not find any defunct processes belonging to 2020
[2025-04-11 19:59:08] 2025-04-11 23:58:48,414 | INFO     | did not find any defunct processes belonging to 2020
[2025-04-11 19:59:08] 2025-04-11 23:58:48,415 | INFO     | ready for new job
[2025-04-11 19:59:08] 2025-04-11 23:58:48,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 19:59:08] 2025-04-11 23:58:48,431 | INFO     | **************************************
[2025-04-11 19:59:08] 2025-04-11 23:58:48,431 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-11 19:59:08] 2025-04-11 23:58:48,431 | INFO     | **************************************
[2025-04-11 19:59:08] 2025-04-11 23:58:48,431 | INFO     | 
[2025-04-11 19:59:08] 2025-04-11 23:58:48,446 | INFO     | architecture information:
[2025-04-11 19:59:08] 2025-04-11 23:58:48,454 | INFO     | executing command: cat /etc/os-release
[2025-04-11 19:59:08] 2025-04-11 23:58:48,896 | INFO     | cat /etc/os-release:
[2025-04-11 19:59:08] NAME="CentOS Linux"
[2025-04-11 19:59:08] VERSION="7 (Core)"
[2025-04-11 19:59:08] ID="centos"
[2025-04-11 19:59:08] ID_LIKE="rhel fedora"
[2025-04-11 19:59:08] VERSION_ID="7"
[2025-04-11 19:59:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 19:59:08] ANSI_COLOR="0;31"
[2025-04-11 19:59:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 19:59:08] HOME_URL="https://www.centos.org/"
[2025-04-11 19:59:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 19:59:08] 
[2025-04-11 19:59:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 19:59:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 19:59:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 19:59:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 19:59:08] 
[2025-04-11 19:59:08] 2025-04-11 23:58:48,897 | INFO     | **************************************
[2025-04-11 19:59:08] 2025-04-11 23:58:49,400 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-11 19:59:08] 2025-04-11 23:58:49,572 | INFO     | sufficient remaining disk space (56645124096 B)
[2025-04-11 19:59:08] 2025-04-11 23:58:49,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 19:59:08] 2025-04-11 23:58:49,573 | INFO     | current server update state: UPDATING_FINAL
[2025-04-11 19:59:08] 2025-04-11 23:58:49,573 | INFO     | update_server=False
[2025-04-11 19:59:08] 2025-04-11 23:58:49,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 19:59:08] 2025-04-11 23:58:49,580 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-11 19:59:08] 2025-04-11 23:58:49,581 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 19:59:08] 2025-04-11 23:58:49,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 19:59:08] 2025-04-11 23:58:49,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 19:59:08] 2025-04-11 23:58:49,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 19:59:08] 2025-04-11 23:58:49,587 | INFO     | aborting loop
[2025-04-11 19:59:08] 2025-04-11 23:58:50,082 | INFO     | all job control threads have been joined
[2025-04-11 19:59:08] 2025-04-11 23:58:50,107 | INFO     | all data control threads have been joined
[2025-04-11 19:59:08] 2025-04-11 23:58:50,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 19:59:08] 2025-04-11 23:58:50,584 | INFO     | [job] retrieve thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:50,591 | INFO     | [data] copytool_in thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:50,610 | INFO     | [job] job monitor thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:50,732 | INFO     | all payload control threads have been joined
[2025-04-11 19:59:08] 2025-04-11 23:58:50,824 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:50,875 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:50,945 | INFO     | [payload] validate_post thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:51,090 | INFO     | [job] control thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:51,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:51,113 | INFO     | [data] control thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:51,738 | INFO     | [payload] control thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:51,970 | INFO     | [payload] failed_post thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:52,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 19:59:08] 2025-04-11 23:58:52,097 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:52,107 | INFO     | [job] validate thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:52,536 | INFO     | [data] copytool_out thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:53,075 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 19:59:08] 2025-04-11 23:58:53,103 | INFO     | [job] queue monitor thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:57,090 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 19:59:08] 2025-04-11 23:58:58,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324175193920)>', '<ExcThread(monitor, started 140323737028352)>']
[2025-04-11 19:59:08] 2025-04-11 23:58:58,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 19:59:08] 2025-04-11 23:58:58,660 | INFO     | [monitor] control thread has ended
[2025-04-11 19:59:08] 2025-04-11 23:59:03,109 | INFO     | all workflow threads have been joined
[2025-04-11 19:59:08] 2025-04-11 23:59:03,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 19:59:08] 2025-04-11 23:59:03,110 | INFO     | traces error code: 0
[2025-04-11 19:59:08] 2025-04-11 23:59:03,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 19:59:08] 2025-04-11 23:59:04,762 [wrapper] ==== pilot stdout END ====
[2025-04-11 19:59:08] 2025-04-11 23:59:04,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 19:59:08] 2025-04-11 23:59:04,871 [wrapper] pilotpid: 46675
[2025-04-11 19:59:08] 2025-04-11 23:59:05,052 [wrapper] Pilot exit status: 0
[2025-04-11 19:59:08] 2025-04-11 23:59:05,687 [wrapper] pandaids: 6595181487
[2025-04-11 19:59:08] 2025-04-11 23:59:06,319 [wrapper] cleanup supervisor_pilot 10626 46676
[2025-04-11 19:59:08] 2025-04-11 23:59:06,376 [wrapper] Test setup, not cleaning
[2025-04-11 19:59:08] 2025-04-11 23:59:06,404 [wrapper] apfmon messages muted
[2025-04-11 19:59:08] 2025-04-11 23:59:06,520 [wrapper] ==== wrapper stdout END ====
[2025-04-11 19:59:08] 2025-04-11 23:59:06,551 [wrapper] ==== wrapper stderr END ====
[2025-04-11 19:59:08]  *** Error codes and diagnostics ***
[2025-04-11 19:59:08]     "exeErrorCode": 0,
[2025-04-11 19:59:08]     "exeErrorDiag": "",
[2025-04-11 19:59:08]     "pilotErrorCode": 0,
[2025-04-11 19:59:08]     "pilotErrorDiag": "",
[2025-04-11 19:59:08]  *** Listing of results directory ***
[2025-04-11 19:59:08] total 415236
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas    495897 Apr  9 10:48 pilot3.tar.gz
[2025-04-11 19:59:08] -rwx------ 1 boincer umatlas     37140 Apr  9 11:22 runpilot2-wrapper.sh
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas      5111 Apr  9 11:22 queuedata.json
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas       100 Apr 11 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 19:59:08] -rwxr-xr-x 1 boincer umatlas      7986 Apr 11 00:46 run_atlas
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas       105 Apr 11 00:46 job.xml
[2025-04-11 19:59:08] -rw-r--r-- 2 boincer umatlas 222632989 Apr 11 00:46 EVNT.44075481._000106.pool.root.1
[2025-04-11 19:59:08] -rw-r--r-- 2 boincer umatlas     17569 Apr 11 00:46 start_atlas.sh
[2025-04-11 19:59:08] drwxrwx--x 2 boincer umatlas      4096 Apr 11 00:46 shared
[2025-04-11 19:59:08] -rw-r--r-- 2 boincer umatlas    508879 Apr 11 00:46 input.tar.gz
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas         0 Apr 11 00:46 boinc_lockfile
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas      2572 Apr 11 00:47 pandaJob.out
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas       467 Apr 11 00:48 setup.sh.local
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas    986054 Apr 11 00:51 agis_schedconf.cvmfs.json
[2025-04-11 19:59:08] drwx------ 4 boincer umatlas      4096 Apr 11 00:52 pilot3
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas 188976817 Apr 11 19:53 HITS.44075483._002639.pool.root.1
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas       531 Apr 11 19:53 boinc_task_state.xml
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas      1057 Apr 11 19:56 memory_monitor_summary.json
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas   1603529 Apr 11 19:56 agis_ddmendpoints.agis.ALL.json
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas    753713 Apr 11 19:56 log.44075483._002639.job.log.tgz.1
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas      6134 Apr 11 19:57 init_data.xml
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas        95 Apr 11 19:58 pilot_heartbeat.json
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas      7762 Apr 11 19:58 heartbeat.json
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas      4476 Apr 11 19:59 pilotlog.txt
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas      8192 Apr 11 19:59 boinc_mmap_file
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas   4121693 Apr 11 19:59 log.44075483._002639.job.log.1
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas        28 Apr 11 19:59 wrapper_checkpoint.txt
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas       357 Apr 11 19:59 output.list
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas       620 Apr 11 19:59 runtime_log
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas   4894720 Apr 11 19:59 result.tar.gz
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas     11419 Apr 11 19:59 runtime_log.err
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas       664 Apr 11 19:59 juQNDmARmM7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVMMLDmfluODo.diag
[2025-04-11 19:59:08] -rw-r--r-- 1 boincer umatlas     21565 Apr 11 19:59 stderr.txt
[2025-04-11 19:59:08] HITS file was successfully produced:
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas 188976817 Apr 11 19:53 shared/HITS.pool.root.1
[2025-04-11 19:59:08]  *** Contents of shared directory: ***
[2025-04-11 19:59:08] total 407268
[2025-04-11 19:59:08] -rw-r--r-- 2 boincer umatlas 222632989 Apr 11 00:46 ATLAS.root_0
[2025-04-11 19:59:08] -rw-r--r-- 2 boincer umatlas     17569 Apr 11 00:46 start_atlas.sh
[2025-04-11 19:59:08] -rw-r--r-- 2 boincer umatlas    508879 Apr 11 00:46 input.tar.gz
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas 188976817 Apr 11 19:53 HITS.pool.root.1
[2025-04-11 19:59:08] -rw------- 1 boincer umatlas   4894720 Apr 11 19:59 result.tar.gz
19:59:10 (15649): run_atlas exited; CPU time 63780.671378
19:59:10 (15649): called boinc_finish(0)

</stderr_txt>
]]>

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