Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
05:35:16 (289008): wrapper (7.7.26015): starting
05:35:16 (289008): wrapper: running run_atlas (--nthreads 4)
[2025-04-11 05:35:16] Arguments: --nthreads 4
[2025-04-11 05:35:16] Threads: 4
[2025-04-11 05:35:16] Checking for CVMFS
[2025-04-11 05:35:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 05:35:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 05:35:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 05:35:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 05:35:16] 2.12.7.0 1248243 2716 107948 144749 3 56 3490617 4096001 2766 130560 0 9082965 99.998 584728 5355 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-11 05:35:16] CVMFS is ok
[2025-04-11 05:35:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 05:35:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-11 05:35:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-11 05:35:16] Further information can be found at the LHC@home message board.
[2025-04-11 05:35:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 05:35:16] Checking for apptainer binary...
[2025-04-11 05:35:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 05:35:16] Running /usr/bin/apptainer --version
[2025-04-11 05:35:16] apptainer version 1.2.3
[2025-04-11 05:35:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 05:35:16] Ryzen-7-7700-Zen4-Deb12
[2025-04-11 05:35:16] apptainer works
[2025-04-11 05:35:16] Set ATHENA_PROC_NUMBER=4
[2025-04-11 05:35:16] Set ATHENA_CORE_NUMBER=4
[2025-04-11 05:35:16] Starting ATLAS job with PandaID=6584892175
[2025-04-11 05:35:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 06:43:08]  *** The last 200 lines of the pilot log: ***
[2025-04-11 06:43:08]  lfn=log.44004367._002952.job.log.tgz.1
[2025-04-11 06:43:08]  mtime=0
[2025-04-11 06:43:08]  protocol_id=None
[2025-04-11 06:43:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-11 06:43:08]  replicas=None
[2025-04-11 06:43:08]  scope=mc23_13p6TeV
[2025-04-11 06:43:08]  status=None
[2025-04-11 06:43:08]  status_code=0
[2025-04-11 06:43:08]  storage_token=
[2025-04-11 06:43:08]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6584892175/log.44004367._002952.job.log.tgz.1
[2025-04-11 06:43:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/b2/log.44004367._002952.job.log.tgz.1
[2025-04-11 06:43:08]  workdir=None
[2025-04-11 06:43:08] ]
[2025-04-11 06:43:08] 2025-04-11 04:42:39,094 | INFO     | transferring file log.44004367._002952.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6584892175/log.44004367._002952.job.log.tgz.1 to /var/lib/boinc
[2025-04-11 06:43:08] 2025-04-11 04:42:39,094 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6584892175/log.44004367._002952.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.440043
[2025-04-11 06:43:08] 2025-04-11 04:42:39,126 | INFO     | adding to output.list: log.44004367._002952.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/b2/log.44004367._002952.job.log.tg
[2025-04-11 06:43:08] 2025-04-11 04:42:39,127 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-11 06:43:08] 2025-04-11 04:42:39,127 | INFO     | summary of transferred files:
[2025-04-11 06:43:08] 2025-04-11 04:42:39,127 | INFO     |  -- lfn=log.44004367._002952.job.log.tgz.1, status_code=0, status=transferred
[2025-04-11 06:43:08] 2025-04-11 04:42:39,127 | INFO     | stage-out finished correctly
[2025-04-11 06:43:08] 2025-04-11 04:42:41,404 | INFO     | monitor loop #311: job 0:6584892175 is in state 'finished'
[2025-04-11 06:43:08] 2025-04-11 04:42:41,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 06:43:08] 2025-04-11 04:42:42,357 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-11 06:43:08] 2025-04-11 04:42:43,907 | INFO     | monitor loop #312: job 0:6584892175 is in state 'finished'
[2025-04-11 06:43:08] 2025-04-11 04:42:43,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 06:43:08] 2025-04-11 04:42:44,329 | INFO     | job 6584892175 has state=finished
[2025-04-11 06:43:08] 2025-04-11 04:42:44,329 | INFO     | preparing for final server update for job 6584892175 in state='finished'
[2025-04-11 06:43:08] 2025-04-11 04:42:44,329 | INFO     | this job has now completed (state=finished)
[2025-04-11 06:43:08] 2025-04-11 04:42:44,329 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-11 06:43:08] 2025-04-11 04:42:44,329 | INFO     | log transfer has been attempted: DONE
[2025-04-11 06:43:08] 2025-04-11 04:42:44,329 | INFO     | job 6584892175 has finished - writing final server update
[2025-04-11 06:43:08] 2025-04-11 04:42:44,330 | INFO     | total number of processed events: 400 (read)
[2025-04-11 06:43:08] 2025-04-11 04:42:44,331 | INFO     | executing command: lscpu
[2025-04-11 06:43:08] 2025-04-11 04:42:44,351 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-11 06:43:08] 2025-04-11 04:42:46,150 | INFO     | PID=292694 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-11 06:43:08] 2025-04-11 04:42:46,150 | INFO     | .. there are 3 such processes running
[2025-04-11 06:43:08] 2025-04-11 04:42:46,409 | INFO     | monitor loop #313: job 0:6584892175 is in state 'finished'
[2025-04-11 06:43:08] 2025-04-11 04:42:46,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 06:43:08] 2025-04-11 04:42:48,912 | INFO     | monitor loop #314: job 0:6584892175 is in state 'finished'
[2025-04-11 06:43:08] 2025-04-11 04:42:48,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 06:43:08] 2025-04-11 04:42:49,039 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-11 06:43:08] 2025-04-11 04:42:49,039 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6584892175/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 06:43:08] 2025-04-11 04:42:49,040 | INFO     | extracted standard info from prmon json
[2025-04-11 06:43:08] 2025-04-11 04:42:49,040 | INFO     | extracted standard memory fields from prmon json
[2025-04-11 06:43:08] 2025-04-11 04:42:49,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-11 06:43:08] 2025-04-11 04:42:49,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-11 06:43:08] 2025-04-11 04:42:49,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | fitting pss+swap vs Time
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | model: linear, x: [1744342843.0, 1744342904.0, 1744342965.0, 1744343026.0, 1744343087.0, 1744343148.0, 1744343209.0, 1744343270.0, 1744343331.0, 1744343392.0, 1744
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | sum of square deviations: 63666310.0
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | sum of deviations: 6289505711.000002
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | mean x: 1744344612.0
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | mean y: 2309927.033898305
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | -- intersect: -172319054372.64172
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | intersect: -172319054372.64172
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | chi2: 0.9803737774381318
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | -- intersect: -172319054372.64172
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | current memory leak: 98.79 B/s (using 59 data points, chi2=0.98)
[2025-04-11 06:43:08] 2025-04-11 04:42:49,041 | INFO     | ..............................
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | . Timing measurements:
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | . get job = 0 s
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | . initial setup = 1 s
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | . payload setup = 2 s
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | . stage-in = 0 s
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | . payload execution = 4018 s
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | . stage-out = 0 s
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | . log creation = 0 s
[2025-04-11 06:43:08] 2025-04-11 04:42:49,042 | INFO     | ..............................
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | 
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | job summary report
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | --------------------------------------------------
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | PanDA job id: 6584892175
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | task id: 44004367
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | errors: (none)
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | pilot state: finished 
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | transexitcode: 0
[2025-04-11 06:43:08] 2025-04-11 04:42:49,082 | INFO     | exeerrorcode: 0
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | exeerrordiag: 
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | exitcode: 0
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | exitmsg: OK
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | cpuconsumptiontime: 13434 s
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | nevents: 400
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | neventsw: 0
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | pid: 299219
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | pgrp: 299219
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | corecount: 4
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | event service: False
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | sizes: {0: 2417328, 2: 2417534, 11: 2417562, 4025: 2443438, 4026: 2452393, 4029: 2452449, 4036: 2452747}
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | --------------------------------------------------
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | 
[2025-04-11 06:43:08] 2025-04-11 04:42:49,083 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | job 6584892175 has completed (purged errors)
[2025-04-11 06:43:08] 2025-04-11 04:42:49,094 | INFO     | overall cleanup function is called
[2025-04-11 06:43:08] 2025-04-11 04:42:50,101 | INFO     | --- collectZombieJob: --- 10, [299219]
[2025-04-11 06:43:08] 2025-04-11 04:42:50,101 | INFO     | zombie collector waiting for pid 299219
[2025-04-11 06:43:08] 2025-04-11 04:42:50,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 06:43:08] 2025-04-11 04:42:50,101 | INFO     | collected zombie processes
[2025-04-11 06:43:08] 2025-04-11 04:42:50,101 | INFO     | will attempt to kill all subprocesses of pid=299219
[2025-04-11 06:43:08] 2025-04-11 04:42:50,129 | INFO     | process IDs to be killed: [299219] (in reverse order)
[2025-04-11 06:43:08] 2025-04-11 04:42:50,150 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 06:43:08] 2025-04-11 04:42:50,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 06:43:08] 2025-04-11 04:42:50,151 | INFO     | did not find any defunct processes belonging to 299219
[2025-04-11 06:43:08] 2025-04-11 04:42:50,152 | INFO     | did not find any defunct processes belonging to 299219
[2025-04-11 06:43:08] 2025-04-11 04:42:50,153 | INFO     | ready for new job
[2025-04-11 06:43:08] 2025-04-11 04:42:50,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 06:43:08] 2025-04-11 04:42:50,153 | INFO     | ***************************************
[2025-04-11 06:43:08] 2025-04-11 04:42:50,153 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-11 06:43:08] 2025-04-11 04:42:50,153 | INFO     | ***************************************
[2025-04-11 06:43:08] 2025-04-11 04:42:50,153 | INFO     | 
[2025-04-11 06:43:08] 2025-04-11 04:42:50,154 | INFO     | architecture information:
[2025-04-11 06:43:08] 2025-04-11 04:42:50,154 | INFO     | executing command: cat /etc/os-release
[2025-04-11 06:43:08] 2025-04-11 04:42:50,162 | INFO     | cat /etc/os-release:
[2025-04-11 06:43:08] NAME="CentOS Linux"
[2025-04-11 06:43:08] VERSION="7 (Core)"
[2025-04-11 06:43:08] ID="centos"
[2025-04-11 06:43:08] ID_LIKE="rhel fedora"
[2025-04-11 06:43:08] VERSION_ID="7"
[2025-04-11 06:43:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 06:43:08] ANSI_COLOR="0;31"
[2025-04-11 06:43:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 06:43:08] HOME_URL="https://www.centos.org/"
[2025-04-11 06:43:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 06:43:08] 
[2025-04-11 06:43:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 06:43:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 06:43:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 06:43:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 06:43:08] 
[2025-04-11 06:43:08] 2025-04-11 04:42:50,162 | INFO     | ***************************************
[2025-04-11 06:43:08] 2025-04-11 04:42:50,665 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-04-11 06:43:08] 2025-04-11 04:42:50,673 | INFO     | sufficient remaining disk space (879808741376 B)
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | INFO     | aborting loop
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 06:43:08] 2025-04-11 04:42:50,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 06:43:08] 2025-04-11 04:42:50,737 | INFO     | all data control threads have been joined
[2025-04-11 06:43:08] 2025-04-11 04:42:51,108 | INFO     | all job control threads have been joined
[2025-04-11 06:43:08] 2025-04-11 04:42:51,677 | INFO     | [job] job monitor thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:51,677 | INFO     | [job] queue monitor thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:51,679 | INFO     | [job] retrieve thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:51,741 | INFO     | [data] control thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:52,105 | INFO     | all payload control threads have been joined
[2025-04-11 06:43:08] 2025-04-11 04:42:52,113 | INFO     | [job] control thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:52,197 | INFO     | [payload] validate_post thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:52,585 | INFO     | [job] validate thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:52,669 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:52,679 | INFO     | [data] copytool_out thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:52,716 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:52,762 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:52,903 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 06:43:08] 2025-04-11 04:42:52,911 | INFO     | [data] copytool_in thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:53,109 | INFO     | [payload] control thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:53,262 | INFO     | [payload] failed_post thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:42:56,905 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:43:01,387 | INFO     | job.realtimelogging is not enabled
[2025-04-11 06:43:08] 2025-04-11 04:43:02,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 06:43:08] 2025-04-11 04:43:03,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248028804928)>', '<ExcThread(monitor, started 140247677507328)>']
[2025-04-11 06:43:08] 2025-04-11 04:43:04,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 06:43:08] 2025-04-11 04:43:04,731 | INFO     | [monitor] control thread has ended
[2025-04-11 06:43:08] 2025-04-11 04:43:08,891 | INFO     | all workflow threads have been joined
[2025-04-11 06:43:08] 2025-04-11 04:43:08,891 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 06:43:08] 2025-04-11 04:43:08,891 | INFO     | traces error code: 0
[2025-04-11 06:43:08] 2025-04-11 04:43:08,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 06:43:08] 2025-04-11 04:43:08,943 [wrapper] ==== pilot stdout END ====
[2025-04-11 06:43:08] 2025-04-11 04:43:08,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 06:43:08] 2025-04-11 04:43:08,946 [wrapper] pilotpid: 292694
[2025-04-11 06:43:08] 2025-04-11 04:43:08,947 [wrapper] Pilot exit status: 0
[2025-04-11 06:43:08] 2025-04-11 04:43:08,951 [wrapper] pandaids: 6584892175
[2025-04-11 06:43:08] 2025-04-11 04:43:08,963 [wrapper] cleanup supervisor_pilot  356669 292695
[2025-04-11 06:43:08] 2025-04-11 04:43:08,965 [wrapper] Test setup, not cleaning
[2025-04-11 06:43:08] 2025-04-11 04:43:08,966 [wrapper] apfmon messages muted
[2025-04-11 06:43:08] 2025-04-11 04:43:08,967 [wrapper] ==== wrapper stdout END ====
[2025-04-11 06:43:08] 2025-04-11 04:43:08,968 [wrapper] ==== wrapper stderr END ====
[2025-04-11 06:43:08]  *** Error codes and diagnostics ***
[2025-04-11 06:43:08]     "exeErrorCode": 0,
[2025-04-11 06:43:08]     "exeErrorDiag": "",
[2025-04-11 06:43:08]     "pilotErrorCode": 0,
[2025-04-11 06:43:08]     "pilotErrorDiag": "",
[2025-04-11 06:43:08]  *** Listing of results directory ***
[2025-04-11 06:43:08] total 411176
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc    494584 Apr  2 19:29 pilot3.tar.gz
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc      5112 Apr  2 19:54 queuedata.json
[2025-04-11 06:43:08] -rwx------ 1 boinc boinc     37140 Apr  2 19:54 runpilot2-wrapper.sh
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc       100 Apr 11 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 06:43:08] -rwxr-xr-x 1 boinc boinc      7986 Apr 11 05:35 run_atlas
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc       105 Apr 11 05:35 job.xml
[2025-04-11 06:43:08] -rw-r--r-- 2 boinc boinc     17571 Apr 11 05:35 start_atlas.sh
[2025-04-11 06:43:08] drwxrwx--x 2 boinc boinc      4096 Apr 11 05:35 shared
[2025-04-11 06:43:08] -rw-r--r-- 2 boinc boinc    507238 Apr 11 05:35 input.tar.gz
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc      9243 Apr 11 05:35 init_data.xml
[2025-04-11 06:43:08] -rw-r--r-- 2 boinc boinc 222792760 Apr 11 05:35 EVNT.44004365._000119.pool.root.1
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc         0 Apr 11 05:35 boinc_lockfile
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc      2548 Apr 11 05:35 pandaJob.out
[2025-04-11 06:43:08] -rw------- 1 boinc boinc       424 Apr 11 05:35 setup.sh.local
[2025-04-11 06:43:08] -rw------- 1 boinc boinc    987284 Apr 11 05:35 agis_schedconf.cvmfs.json
[2025-04-11 06:43:08] -rw------- 1 boinc boinc   1603528 Apr 11 05:35 agis_ddmendpoints.agis.ALL.json
[2025-04-11 06:43:08] drwx------ 4 boinc boinc      4096 Apr 11 05:35 pilot3
[2025-04-11 06:43:08] -rw------- 1 boinc boinc 193115992 Apr 11 06:42 HITS.44004367._002952.pool.root.1
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc       529 Apr 11 06:42 boinc_task_state.xml
[2025-04-11 06:43:08] -rw------- 1 boinc boinc      1014 Apr 11 06:42 memory_monitor_summary.json
[2025-04-11 06:43:08] -rw------- 1 boinc boinc    223171 Apr 11 06:42 log.44004367._002952.job.log.tgz.1
[2025-04-11 06:43:08] -rw------- 1 boinc boinc        95 Apr 11 06:42 pilot_heartbeat.json
[2025-04-11 06:43:08] -rw------- 1 boinc boinc      7662 Apr 11 06:42 heartbeat.json
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc      8192 Apr 11 06:43 boinc_mmap_file
[2025-04-11 06:43:08] -rw------- 1 boinc boinc      4422 Apr 11 06:43 pilotlog.txt
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc        27 Apr 11 06:43 wrapper_checkpoint.txt
[2025-04-11 06:43:08] -rw------- 1 boinc boinc    419721 Apr 11 06:43 log.44004367._002952.job.log.1
[2025-04-11 06:43:08] -rw------- 1 boinc boinc       357 Apr 11 06:43 output.list
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc       620 Apr 11 06:43 runtime_log
[2025-04-11 06:43:08] -rw------- 1 boinc boinc    665600 Apr 11 06:43 result.tar.gz
[2025-04-11 06:43:08] -rw------- 1 boinc boinc       654 Apr 11 06:43 XmCODmWTHK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9rFLDmTNFQBo.diag
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc     11162 Apr 11 06:43 runtime_log.err
[2025-04-11 06:43:08] -rw-r--r-- 1 boinc boinc     21916 Apr 11 06:43 stderr.txt
[2025-04-11 06:43:09] HITS file was successfully produced:
[2025-04-11 06:43:09] -rw------- 1 boinc boinc 193115992 Apr 11 06:42 shared/HITS.pool.root.1
[2025-04-11 06:43:09]  *** Contents of shared directory: ***
[2025-04-11 06:43:09] total 407340
[2025-04-11 06:43:09] -rw-r--r-- 2 boinc boinc     17571 Apr 11 05:35 start_atlas.sh
[2025-04-11 06:43:09] -rw-r--r-- 2 boinc boinc    507238 Apr 11 05:35 input.tar.gz
[2025-04-11 06:43:09] -rw-r--r-- 2 boinc boinc 222792760 Apr 11 05:35 ATLAS.root_0
[2025-04-11 06:43:09] -rw------- 1 boinc boinc 193115992 Apr 11 06:42 HITS.pool.root.1
[2025-04-11 06:43:09] -rw------- 1 boinc boinc    665600 Apr 11 06:43 result.tar.gz
06:43:10 (289008): run_atlas exited; CPU time 13434.063996
06:43:10 (289008): called boinc_finish(0)

</stderr_txt>
]]>

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