Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:30:35 (1955463): wrapper (7.7.26015): starting
16:30:35 (1955463): wrapper: running run_atlas (--nthreads 12)
[2025-04-11 16:30:35] Arguments: --nthreads 12
[2025-04-11 16:30:35] Threads: 12
[2025-04-11 16:30:35] Checking for CVMFS
[2025-04-11 16:30:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 16:30:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 16:30:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 16:30:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 16:30:36] 2.12.7.0 3717190 2869 50276 144775 1 186 2467730 4096001 2615 130560 0 6366745 99.996 656646 1316 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-11 16:30:36] CVMFS is ok
[2025-04-11 16:30:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 16:30:36] Checking for apptainer binary...
[2025-04-11 16:30:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 16:30:36] Running /usr/bin/apptainer --version
[2025-04-11 16:30:36] apptainer version 1.3.4
[2025-04-11 16:30:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 16:30:37] t610hp
[2025-04-11 16:30:37] apptainer works
[2025-04-11 16:30:37] Set ATHENA_PROC_NUMBER=12
[2025-04-11 16:30:37] Set ATHENA_CORE_NUMBER=12
[2025-04-11 16:30:37] Starting ATLAS job with PandaID=6595235551
[2025-04-11 16:30:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 18:14:29]  *** The last 200 lines of the pilot log: ***
[2025-04-11 18:14:29] 2025-04-11 18:14:09,329 | INFO     | mean y: 2510136.1041666665
[2025-04-11 18:14:29] 2025-04-11 18:14:09,329 | INFO     | -- intersect: -317236185933.7727
[2025-04-11 18:14:29] 2025-04-11 18:14:09,329 | INFO     | intersect: -317236185933.7727
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | chi2: 5.0423441556700865
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | current chi2=5.0423441556700865 (change=0.6974190767890807 %)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | right removable region: 95
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | sum of square deviations: 274312120.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | sum of deviations: 25332728338.499996
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | mean x: 1744392295.5
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | mean y: 2612282.6354166665
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | -- intersect: -161092042002.68713
[2025-04-11 18:14:29] 2025-04-11 18:14:09,330 | INFO     | intersect: -161092042002.68713
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | chi2: 2.1991163709655432
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | current chi2=2.1991163709655432 (change=56.69118873177289 %)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | sum of square deviations: 233641590.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | sum of deviations: 4499118745.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | mean x: 1744392448.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | mean y: 2690461.912087912
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | -- intersect: -33588198734.798298
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | intersect: -33588198734.798298
[2025-04-11 18:14:29] 2025-04-11 18:14:09,331 | INFO     | chi2: 0.6163530313516119
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | current chi2=0.6163530313516119 (change=71.97269596601674 %)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | sum of square deviations: 197203697.5
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | sum of deviations: -5840116332.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | mean x: 1744392600.5
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | mean y: 2733111.976744186
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | -- intersect: 51662290436.45339
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | intersect: 51662290436.45339
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | chi2: 0.07403552240104837
[2025-04-11 18:14:29] 2025-04-11 18:14:09,332 | INFO     | current chi2=0.07403552240104837 (change=87.98813040008994 %)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | sum of square deviations: 164765880.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | sum of deviations: -6827149646.000001
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | mean x: 1744392753.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | mean y: 2737440.4197530863
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | -- intersect: 72282449515.08543
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | intersect: 72282449515.08543
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | chi2: 0.03709450247263015
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | current chi2=0.03709450247263015 (change=49.89634533583722 %)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,333 | INFO     | sum of square deviations: 136095575.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | sum of deviations: -5680206906.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | mean x: 1744392905.5
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | mean y: 2731312.210526316
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | -- intersect: 72808277183.91507
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | intersect: 72808277183.91507
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | chi2: 0.036994488866391034
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | current chi2=0.036994488866391034 (change=0.26961840588888225 %)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | left removable region: 50
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | sum of square deviations: 28242390.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | sum of deviations: 249632679.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,334 | INFO     | mean x: 1744393485.0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | mean y: 2681005.4
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | -- intersect: -15415901447.80939
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | intersect: -15415901447.80939
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | chi2: 2.6685074896267986e-05
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | -- intersect: -15415901447.80939
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | current memory leak: 8.84 B/s (using 45 data points, chi2=0.00)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | ..............................
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | . Timing measurements:
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | . get job = 0 s
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | . initial setup = 2 s
[2025-04-11 18:14:29] 2025-04-11 18:14:09,335 | INFO     | . payload setup = 10 s
[2025-04-11 18:14:29] 2025-04-11 18:14:09,336 | INFO     | . stage-in = 0 s
[2025-04-11 18:14:29] 2025-04-11 18:14:09,336 | INFO     | . payload execution = 6154 s
[2025-04-11 18:14:29] 2025-04-11 18:14:09,336 | INFO     | . stage-out = 0 s
[2025-04-11 18:14:29] 2025-04-11 18:14:09,336 | INFO     | . log creation = 0 s
[2025-04-11 18:14:29] 2025-04-11 18:14:09,336 | INFO     | ..............................
[2025-04-11 18:14:29] 2025-04-11 18:14:09,396 | INFO     | 
[2025-04-11 18:14:29] 2025-04-11 18:14:09,397 | INFO     | job summary report
[2025-04-11 18:14:29] 2025-04-11 18:14:09,397 | INFO     | --------------------------------------------------
[2025-04-11 18:14:29] 2025-04-11 18:14:09,397 | INFO     | PanDA job id: 6595235551
[2025-04-11 18:14:29] 2025-04-11 18:14:09,397 | INFO     | task id: 44075164
[2025-04-11 18:14:29] 2025-04-11 18:14:09,397 | INFO     | errors: (none)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | pilot state: finished 
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | transexitcode: 0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | exeerrorcode: 0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | exeerrordiag: 
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | exitcode: 0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | exitmsg: OK
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | cpuconsumptiontime: 51890 s
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | nevents: 400
[2025-04-11 18:14:29] 2025-04-11 18:14:09,398 | INFO     | neventsw: 0
[2025-04-11 18:14:29] 2025-04-11 18:14:09,399 | INFO     | pid: 1965881
[2025-04-11 18:14:29] 2025-04-11 18:14:09,399 | INFO     | pgrp: 1965881
[2025-04-11 18:14:29] 2025-04-11 18:14:09,399 | INFO     | corecount: 12
[2025-04-11 18:14:29] 2025-04-11 18:14:09,399 | INFO     | event service: False
[2025-04-11 18:14:29] 2025-04-11 18:14:09,399 | INFO     | sizes: {0: 2417177, 1: 2417376, 8: 2417582, 12: 2417610, 6168: 2444206, 6169: 2453193, 6170: 2453377, 6175: 2453547}
[2025-04-11 18:14:29] 2025-04-11 18:14:09,399 | INFO     | --------------------------------------------------
[2025-04-11 18:14:29] 2025-04-11 18:14:09,399 | INFO     | 
[2025-04-11 18:14:29] 2025-04-11 18:14:09,399 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/4
[2025-04-11 18:14:29] 2025-04-11 18:14:09,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | job 6595235551 has completed (purged errors)
[2025-04-11 18:14:29] 2025-04-11 18:14:09,427 | INFO     | overall cleanup function is called
[2025-04-11 18:14:29] 2025-04-11 18:14:10,435 | INFO     | --- collectZombieJob: --- 10, [1965881]
[2025-04-11 18:14:29] 2025-04-11 18:14:10,435 | INFO     | zombie collector waiting for pid 1965881
[2025-04-11 18:14:29] 2025-04-11 18:14:10,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 18:14:29] 2025-04-11 18:14:10,436 | INFO     | collected zombie processes
[2025-04-11 18:14:29] 2025-04-11 18:14:10,436 | INFO     | will attempt to kill all subprocesses of pid=1965881
[2025-04-11 18:14:29] 2025-04-11 18:14:10,594 | INFO     | process IDs to be killed: [1965881] (in reverse order)
[2025-04-11 18:14:29] 2025-04-11 18:14:10,632 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 18:14:29] 2025-04-11 18:14:10,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 18:14:29] 2025-04-11 18:14:10,634 | INFO     | did not find any defunct processes belonging to 1965881
[2025-04-11 18:14:29] 2025-04-11 18:14:10,636 | INFO     | did not find any defunct processes belonging to 1965881
[2025-04-11 18:14:29] 2025-04-11 18:14:10,637 | INFO     | ready for new job
[2025-04-11 18:14:29] 2025-04-11 18:14:10,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 18:14:29] 2025-04-11 18:14:10,638 | INFO     | **************************************
[2025-04-11 18:14:29] 2025-04-11 18:14:10,638 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-11 18:14:29] 2025-04-11 18:14:10,638 | INFO     | **************************************
[2025-04-11 18:14:29] 2025-04-11 18:14:10,638 | INFO     | 
[2025-04-11 18:14:29] 2025-04-11 18:14:10,639 | INFO     | architecture information:
[2025-04-11 18:14:29] 2025-04-11 18:14:10,640 | INFO     | executing command: cat /etc/os-release
[2025-04-11 18:14:29] 2025-04-11 18:14:10,650 | INFO     | cat /etc/os-release:
[2025-04-11 18:14:29] NAME="CentOS Linux"
[2025-04-11 18:14:29] VERSION="7 (Core)"
[2025-04-11 18:14:29] ID="centos"
[2025-04-11 18:14:29] ID_LIKE="rhel fedora"
[2025-04-11 18:14:29] VERSION_ID="7"
[2025-04-11 18:14:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 18:14:29] ANSI_COLOR="0;31"
[2025-04-11 18:14:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 18:14:29] HOME_URL="https://www.centos.org/"
[2025-04-11 18:14:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 18:14:29] 
[2025-04-11 18:14:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 18:14:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 18:14:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 18:14:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 18:14:29] 
[2025-04-11 18:14:29] 2025-04-11 18:14:10,651 | INFO     | **************************************
[2025-04-11 18:14:29] 2025-04-11 18:14:11,154 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/4
[2025-04-11 18:14:29] 2025-04-11 18:14:11,165 | INFO     | sufficient remaining disk space (17259560960 B)
[2025-04-11 18:14:29] 2025-04-11 18:14:11,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 18:14:29] 2025-04-11 18:14:11,166 | INFO     | current server update state: UPDATING_FINAL
[2025-04-11 18:14:29] 2025-04-11 18:14:11,166 | INFO     | update_server=False
[2025-04-11 18:14:29] 2025-04-11 18:14:11,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 18:14:29] 2025-04-11 18:14:11,166 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-11 18:14:29] 2025-04-11 18:14:11,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 18:14:29] 2025-04-11 18:14:11,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 18:14:29] 2025-04-11 18:14:11,167 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 18:14:29] 2025-04-11 18:14:11,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 18:14:29] 2025-04-11 18:14:11,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 18:14:29] 2025-04-11 18:14:11,328 | INFO     | all job control threads have been joined
[2025-04-11 18:14:29] 2025-04-11 18:14:11,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 18:14:29] 2025-04-11 18:14:11,441 | INFO     | aborting loop
[2025-04-11 18:14:29] 2025-04-11 18:14:11,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 18:14:29] 2025-04-11 18:14:12,171 | INFO     | [job] retrieve thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:12,173 | INFO     | [job] queue monitor thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:12,238 | INFO     | all data control threads have been joined
[2025-04-11 18:14:29] 2025-04-11 18:14:12,266 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:12,333 | INFO     | [job] control thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:12,342 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:12,446 | INFO     | [job] job monitor thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:12,619 | INFO     | all payload control threads have been joined
[2025-04-11 18:14:29] 2025-04-11 18:14:12,744 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:12,796 | INFO     | [data] copytool_in thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:13,057 | INFO     | [payload] validate_post thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:13,243 | INFO     | [data] control thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:13,283 | INFO     | [job] validate thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:13,447 | INFO     | [data] copytool_out thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:13,624 | INFO     | [payload] control thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:13,759 | INFO     | [payload] failed_post thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:15,173 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:22,083 | INFO     | job.realtimelogging is not enabled
[2025-04-11 18:14:29] 2025-04-11 18:14:23,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 18:14:29] 2025-04-11 18:14:24,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133104416868160)>', '<ExcThread(monitor, started 133103832008448)>']
[2025-04-11 18:14:29] 2025-04-11 18:14:24,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 18:14:29] 2025-04-11 18:14:24,234 | INFO     | [monitor] control thread has ended
[2025-04-11 18:14:29] 2025-04-11 18:14:29,213 | INFO     | all workflow threads have been joined
[2025-04-11 18:14:29] 2025-04-11 18:14:29,213 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 18:14:29] 2025-04-11 18:14:29,214 | INFO     | traces error code: 0
[2025-04-11 18:14:29] 2025-04-11 18:14:29,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 18:14:29] 2025-04-11 18:14:29,326 [wrapper] ==== pilot stdout END ====
[2025-04-11 18:14:29] 2025-04-11 18:14:29,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 18:14:29] 2025-04-11 18:14:29,334 [wrapper] pilotpid: 1959230
[2025-04-11 18:14:29] 2025-04-11 18:14:29,337 [wrapper] Pilot exit status: 0
[2025-04-11 18:14:29] 2025-04-11 18:14:29,346 [wrapper] pandaids: 6595235551
[2025-04-11 18:14:29] 2025-04-11 18:14:29,368 [wrapper] cleanup supervisor_pilot 1992203 1959231
[2025-04-11 18:14:29] 2025-04-11 18:14:29,371 [wrapper] Test setup, not cleaning
[2025-04-11 18:14:29] 2025-04-11 18:14:29,374 [wrapper] apfmon messages muted
[2025-04-11 18:14:29] 2025-04-11 18:14:29,377 [wrapper] ==== wrapper stdout END ====
[2025-04-11 18:14:29] 2025-04-11 18:14:29,379 [wrapper] ==== wrapper stderr END ====
[2025-04-11 18:14:29]  *** Error codes and diagnostics ***
[2025-04-11 18:14:29]     "exeErrorCode": 0,
[2025-04-11 18:14:29]     "exeErrorDiag": "",
[2025-04-11 18:14:29]     "pilotErrorCode": 0,
[2025-04-11 18:14:29]     "pilotErrorDiag": "",
[2025-04-11 18:14:29]  *** Listing of results directory ***
[2025-04-11 18:14:29] total 411488
[2025-04-11 18:14:29] -rw-r--r-- 1 boinc boinc    495897 Apr  9 16:47 pilot3.tar.gz
[2025-04-11 18:14:29] -rw-r--r-- 1 boinc boinc      5111 Apr  9 17:37 queuedata.json
[2025-04-11 18:14:29] -rwx------ 1 boinc boinc     37140 Apr  9 17:39 runpilot2-wrapper.sh
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc       100 Apr 11 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 18:14:29] -rwxr-xr-x 1 boinc boinc      7986 Apr 11 16:30 run_atlas
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc       105 Apr 11 16:30 job.xml
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc      9361 Apr 11 16:30 init_data.xml
[2025-04-11 18:14:29] -rw-r--r-- 2 boinc boinc 220987773 Apr 11 16:30 EVNT.44075162._000629.pool.root.1
[2025-04-11 18:14:29] -rw-r--r-- 2 boinc boinc     17569 Apr 11 16:30 start_atlas.sh
[2025-04-11 18:14:29] drwxrwx--x 2 boinc boinc      4096 Apr 11 16:30 shared
[2025-04-11 18:14:29] -rw-r--r-- 2 boinc boinc    508883 Apr 11 16:30 input.tar.gz
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc         0 Apr 11 16:30 boinc_lockfile
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc      2549 Apr 11 16:30 pandaJob.out
[2025-04-11 18:14:29] -rw------- 1 boinc boinc       424 Apr 11 16:30 setup.sh.local
[2025-04-11 18:14:29] -rw------- 1 boinc boinc    986274 Apr 11 16:30 agis_schedconf.cvmfs.json
[2025-04-11 18:14:29] -rw------- 1 boinc boinc   1603529 Apr 11 16:30 agis_ddmendpoints.agis.ALL.json
[2025-04-11 18:14:29] drwx------ 4 boinc boinc      4096 Apr 11 16:30 pilot3
[2025-04-11 18:14:29] -rw------- 1 boinc boinc        95 Apr 11 18:13 pilot_heartbeat.json
[2025-04-11 18:14:29] -rw------- 1 boinc boinc 194531902 Apr 11 18:13 HITS.44075164._015738.pool.root.1
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc       529 Apr 11 18:13 boinc_task_state.xml
[2025-04-11 18:14:29] -rw------- 1 boinc boinc      1022 Apr 11 18:13 memory_monitor_summary.json
[2025-04-11 18:14:29] -rw------- 1 boinc boinc    373655 Apr 11 18:14 log.44075164._015738.job.log.tgz.1
[2025-04-11 18:14:29] -rw------- 1 boinc boinc      7666 Apr 11 18:14 heartbeat.json
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc      8192 Apr 11 18:14 boinc_mmap_file
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc        27 Apr 11 18:14 wrapper_checkpoint.txt
[2025-04-11 18:14:29] -rw------- 1 boinc boinc      4571 Apr 11 18:14 pilotlog.txt
[2025-04-11 18:14:29] -rw------- 1 boinc boinc    622092 Apr 11 18:14 log.44075164._015738.job.log.1
[2025-04-11 18:14:29] -rw------- 1 boinc boinc       357 Apr 11 18:14 output.list
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc       620 Apr 11 18:14 runtime_log
[2025-04-11 18:14:29] -rw------- 1 boinc boinc   1013760 Apr 11 18:14 result.tar.gz
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc     11393 Apr 11 18:14 runtime_log.err
[2025-04-11 18:14:29] -rw------- 1 boinc boinc       648 Apr 11 18:14 FtCNDmZZoM7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmlZMLDmDVeGMo.diag
[2025-04-11 18:14:29] -rw-rw-r-- 1 boinc boinc     20526 Apr 11 18:14 stderr.txt
[2025-04-11 18:14:29] HITS file was successfully produced:
[2025-04-11 18:14:29] -rw------- 1 boinc boinc 194531902 Apr 11 18:13 shared/HITS.pool.root.1
[2025-04-11 18:14:29]  *** Contents of shared directory: ***
[2025-04-11 18:14:29] total 407308
[2025-04-11 18:14:29] -rw-r--r-- 2 boinc boinc 220987773 Apr 11 16:30 ATLAS.root_0
[2025-04-11 18:14:29] -rw-r--r-- 2 boinc boinc     17569 Apr 11 16:30 start_atlas.sh
[2025-04-11 18:14:29] -rw-r--r-- 2 boinc boinc    508883 Apr 11 16:30 input.tar.gz
[2025-04-11 18:14:29] -rw------- 1 boinc boinc 194531902 Apr 11 18:13 HITS.pool.root.1
[2025-04-11 18:14:29] -rw------- 1 boinc boinc   1013760 Apr 11 18:14 result.tar.gz
18:14:30 (1955463): run_atlas exited; CPU time 51969.715307
18:14:30 (1955463): called boinc_finish(0)

</stderr_txt>
]]>

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