Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
04:24:38 (232843): wrapper (7.7.26015): starting
04:24:38 (232843): wrapper: running run_atlas (--nthreads 4)
[2025-04-11 04:24:38] Arguments: --nthreads 4
[2025-04-11 04:24:38] Threads: 4
[2025-04-11 04:24:38] Checking for CVMFS
[2025-04-11 04:24:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 04:24:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 04:24:38] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 04:24:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 04:24:38] 2.12.7.0 1248243 2645 107428 144747 1 186 3334176 4096000 2662 130560 0 8920878 99.998 520997 4863 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-11 04:24:38] CVMFS is ok
[2025-04-11 04:24:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 04:24:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-11 04:24:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-11 04:24:38] Further information can be found at the LHC@home message board.
[2025-04-11 04:24:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 04:24:38] Checking for apptainer binary...
[2025-04-11 04:24:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 04:24:38] Running /usr/bin/apptainer --version
[2025-04-11 04:24:38] apptainer version 1.2.3
[2025-04-11 04:24:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 04:24:38] Ryzen-7-7700-Zen4-Deb12
[2025-04-11 04:24:38] apptainer works
[2025-04-11 04:24:38] Set ATHENA_PROC_NUMBER=4
[2025-04-11 04:24:38] Set ATHENA_CORE_NUMBER=4
[2025-04-11 04:24:38] Starting ATLAS job with PandaID=6596558823
[2025-04-11 04:24:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 05:46:01]  *** The last 200 lines of the pilot log: ***
[2025-04-11 05:46:01]  protocol_id=None
[2025-04-11 05:46:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-11 05:46:01]  replicas=None
[2025-04-11 05:46:01]  scope=mc23_13p6TeV
[2025-04-11 05:46:01]  status=None
[2025-04-11 05:46:01]  status_code=0
[2025-04-11 05:46:01]  storage_token=
[2025-04-11 05:46:01]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-6596558823/log.44075164._030146.job.log.tgz.1
[2025-04-11 05:46:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/ca/log.44075164._030146.job.log.tgz.1
[2025-04-11 05:46:01]  workdir=None
[2025-04-11 05:46:01] ]
[2025-04-11 05:46:01] 2025-04-11 03:45:39,445 | INFO     | transferring file log.44075164._030146.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-6596558823/log.44075164._030146.job.log.tgz.1 to /var/lib/boinc
[2025-04-11 05:46:01] 2025-04-11 03:45:39,445 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6596558823/log.44075164._030146.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.440751
[2025-04-11 05:46:01] 2025-04-11 03:45:39,478 | INFO     | adding to output.list: log.44075164._030146.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/ca/log.44075164._030146.job.log.tg
[2025-04-11 05:46:01] 2025-04-11 03:45:39,478 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-11 05:46:01] 2025-04-11 03:45:39,478 | INFO     | summary of transferred files:
[2025-04-11 05:46:01] 2025-04-11 03:45:39,478 | INFO     |  -- lfn=log.44075164._030146.job.log.tgz.1, status_code=0, status=transferred
[2025-04-11 05:46:01] 2025-04-11 03:45:39,478 | INFO     | stage-out finished correctly
[2025-04-11 05:46:01] 2025-04-11 03:45:40,403 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-11 05:46:01] 2025-04-11 03:45:40,469 | INFO     | job 6596558823 has state=finished
[2025-04-11 05:46:01] 2025-04-11 03:45:40,469 | INFO     | preparing for final server update for job 6596558823 in state='finished'
[2025-04-11 05:46:01] 2025-04-11 03:45:40,469 | INFO     | this job has now completed (state=finished)
[2025-04-11 05:46:01] 2025-04-11 03:45:40,469 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-11 05:46:01] 2025-04-11 03:45:40,469 | INFO     | log transfer has been attempted: DONE
[2025-04-11 05:46:01] 2025-04-11 03:45:40,469 | INFO     | job 6596558823 has finished - writing final server update
[2025-04-11 05:46:01] 2025-04-11 03:45:40,469 | INFO     | total number of processed events: 400 (read)
[2025-04-11 05:46:01] 2025-04-11 03:45:40,470 | INFO     | executing command: lscpu
[2025-04-11 05:46:01] 2025-04-11 03:45:40,484 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-11 05:46:01] 2025-04-11 03:45:42,062 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-11 05:46:01] 2025-04-11 03:45:42,062 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6596558823/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 05:46:01] 2025-04-11 03:45:42,063 | INFO     | extracted standard info from prmon json
[2025-04-11 05:46:01] 2025-04-11 03:45:42,063 | INFO     | extracted standard memory fields from prmon json
[2025-04-11 05:46:01] 2025-04-11 03:45:42,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-11 05:46:01] 2025-04-11 03:45:42,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-11 05:46:01] 2025-04-11 03:45:42,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-11 05:46:01] 2025-04-11 03:45:42,064 | INFO     | fitting pss+swap vs Time
[2025-04-11 05:46:01] 2025-04-11 03:45:42,064 | INFO     | sum of square deviations: 120605052.0
[2025-04-11 05:46:01] 2025-04-11 03:45:42,064 | INFO     | sum of deviations: 10649540735.000002
[2025-04-11 05:46:01] 2025-04-11 03:45:42,064 | INFO     | mean x: 1744340801.0
[2025-04-11 05:46:01] 2025-04-11 03:45:42,064 | INFO     | mean y: 2322173.01369863
[2025-04-11 05:46:01] 2025-04-11 03:45:42,064 | INFO     | -- intersect: -154024628671.23477
[2025-04-11 05:46:01] 2025-04-11 03:45:42,064 | INFO     | intersect: -154024628671.23477
[2025-04-11 05:46:01] 2025-04-11 03:45:42,064 | INFO     | chi2: 1.4374956482388415
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | -- intersect: -154024628671.23477
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | current memory leak: 88.30 B/s (using 73 data points, chi2=1.44)
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | ..............................
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | . Timing measurements:
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | . get job = 0 s
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | . initial setup = 1 s
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | . payload setup = 2 s
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | . stage-in = 0 s
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | . payload execution = 4837 s
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | . stage-out = 0 s
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | . log creation = 0 s
[2025-04-11 05:46:01] 2025-04-11 03:45:42,065 | INFO     | ..............................
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | 
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | job summary report
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | --------------------------------------------------
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | PanDA job id: 6596558823
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | task id: 44075164
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | errors: (none)
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | pilot state: finished 
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | transexitcode: 0
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | exeerrorcode: 0
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | exeerrordiag: 
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | exitcode: 0
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | exitmsg: OK
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | cpuconsumptiontime: 16717 s
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | nevents: 400
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | neventsw: 0
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | pid: 243230
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | pgrp: 243230
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | corecount: 4
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | event service: False
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | sizes: {0: 2417334, 1: 2417540, 10: 2417568, 4843: 2443797, 4844: 2452807, 4845: 2452807, 4847: 2453105}
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | --------------------------------------------------
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | 
[2025-04-11 05:46:01] 2025-04-11 03:45:42,108 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-04-11 05:46:01] 2025-04-11 03:45:42,119 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | job 6596558823 has completed (purged errors)
[2025-04-11 05:46:01] 2025-04-11 03:45:42,120 | INFO     | overall cleanup function is called
[2025-04-11 05:46:01] 2025-04-11 03:45:42,819 | WARNING  | process 243230 can no longer be monitored (due to stat problems) - aborting
[2025-04-11 05:46:01] 2025-04-11 03:45:42,835 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 05:46:01] 2025-04-11 03:45:42,835 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 05:46:01] 2025-04-11 03:45:42,836 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/3/PanDA_Pilot-6596558823/payload.stdout) since it has not been created yet
[2025-04-11 05:46:01] 2025-04-11 03:45:42,836 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-04-11 05:46:01] 2025-04-11 03:45:42,843 | INFO     | sufficient remaining disk space (879333736448 B)
[2025-04-11 05:46:01] 2025-04-11 03:45:42,843 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-04-11 05:46:01] 2025-04-11 03:45:42,843 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/3/PanDA_Pilot-6596558823/HITS.44075164._030146.pool.root.1 since it does not exist
[2025-04-11 05:46:01] 2025-04-11 03:45:42,873 | INFO     | number of running child processes to parent process 243230: 1
[2025-04-11 05:46:01] 2025-04-11 03:45:42,873 | INFO     | maximum number of monitored processes: 6
[2025-04-11 05:46:01] 2025-04-11 03:45:42,873 | INFO     | aborting job monitoring since job object (job id=6596558823) has expired
[2025-04-11 05:46:01] 2025-04-11 03:45:43,125 | INFO     | --- collectZombieJob: --- 10, [243230]
[2025-04-11 05:46:01] 2025-04-11 03:45:43,125 | INFO     | zombie collector waiting for pid 243230
[2025-04-11 05:46:01] 2025-04-11 03:45:43,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 05:46:01] 2025-04-11 03:45:43,125 | INFO     | collected zombie processes
[2025-04-11 05:46:01] 2025-04-11 03:45:43,125 | INFO     | will attempt to kill all subprocesses of pid=243230
[2025-04-11 05:46:01] 2025-04-11 03:45:43,164 | INFO     | process IDs to be killed: [243230] (in reverse order)
[2025-04-11 05:46:01] 2025-04-11 03:45:43,185 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 05:46:01] 2025-04-11 03:45:43,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 05:46:01] 2025-04-11 03:45:43,187 | INFO     | did not find any defunct processes belonging to 243230
[2025-04-11 05:46:01] 2025-04-11 03:45:43,188 | INFO     | did not find any defunct processes belonging to 243230
[2025-04-11 05:46:01] 2025-04-11 03:45:43,188 | INFO     | ready for new job
[2025-04-11 05:46:01] 2025-04-11 03:45:43,188 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 05:46:01] 2025-04-11 03:45:43,189 | INFO     | **************************************
[2025-04-11 05:46:01] 2025-04-11 03:45:43,189 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-11 05:46:01] 2025-04-11 03:45:43,189 | INFO     | **************************************
[2025-04-11 05:46:01] 2025-04-11 03:45:43,189 | INFO     | 
[2025-04-11 05:46:01] 2025-04-11 03:45:43,190 | INFO     | architecture information:
[2025-04-11 05:46:01] 2025-04-11 03:45:43,190 | INFO     | executing command: cat /etc/os-release
[2025-04-11 05:46:01] 2025-04-11 03:45:43,197 | INFO     | cat /etc/os-release:
[2025-04-11 05:46:01] NAME="CentOS Linux"
[2025-04-11 05:46:01] VERSION="7 (Core)"
[2025-04-11 05:46:01] ID="centos"
[2025-04-11 05:46:01] ID_LIKE="rhel fedora"
[2025-04-11 05:46:01] VERSION_ID="7"
[2025-04-11 05:46:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 05:46:01] ANSI_COLOR="0;31"
[2025-04-11 05:46:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 05:46:01] HOME_URL="https://www.centos.org/"
[2025-04-11 05:46:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 05:46:01] 
[2025-04-11 05:46:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 05:46:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 05:46:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 05:46:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 05:46:01] 
[2025-04-11 05:46:01] 2025-04-11 03:45:43,197 | INFO     | **************************************
[2025-04-11 05:46:01] 2025-04-11 03:45:43,700 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-04-11 05:46:01] 2025-04-11 03:45:43,724 | INFO     | sufficient remaining disk space (879334785024 B)
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | INFO     | current server update state: UPDATING_FINAL
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | INFO     | update_server=False
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | INFO     | will abort loop
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 05:46:01] 2025-04-11 03:45:43,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 05:46:01] 2025-04-11 03:45:44,286 | INFO     | all payload control threads have been joined
[2025-04-11 05:46:01] 2025-04-11 03:45:44,567 | INFO     | all job control threads have been joined
[2025-04-11 05:46:01] 2025-04-11 03:45:44,729 | INFO     | [job] retrieve thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:44,729 | INFO     | [job] queue monitor thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:44,730 | INFO     | [job] job monitor thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:44,748 | INFO     | all data control threads have been joined
[2025-04-11 05:46:01] 2025-04-11 03:45:44,787 | INFO     | [data] copytool_in thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:45,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 05:46:01] 2025-04-11 03:45:45,022 | INFO     | [payload] validate_post thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:45,291 | INFO     | [payload] control thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:45,573 | INFO     | [job] control thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:45,722 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:45,753 | INFO     | [data] control thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:46,031 | INFO     | [job] validate thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:46,051 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:46,074 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:46,078 | INFO     | [payload] failed_post thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:46,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 05:46:01] 2025-04-11 03:45:47,015 | INFO     | [data] copytool_out thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:50,449 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:53,791 | INFO     | job.realtimelogging is not enabled
[2025-04-11 05:46:01] 2025-04-11 03:45:54,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 05:46:01] 2025-04-11 03:45:56,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122479097664)>', '<ExcThread(monitor, started 140121621915392)>']
[2025-04-11 05:46:01] 2025-04-11 03:45:56,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 05:46:01] 2025-04-11 03:45:56,779 | INFO     | [monitor] control thread has ended
[2025-04-11 05:46:01] 2025-04-11 03:46:01,331 | INFO     | all workflow threads have been joined
[2025-04-11 05:46:01] 2025-04-11 03:46:01,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 05:46:01] 2025-04-11 03:46:01,332 | INFO     | traces error code: 0
[2025-04-11 05:46:01] 2025-04-11 03:46:01,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 05:46:01] 2025-04-11 03:46:01,368 [wrapper] ==== pilot stdout END ====
[2025-04-11 05:46:01] 2025-04-11 03:46:01,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 05:46:01] 2025-04-11 03:46:01,370 [wrapper] pilotpid: 236587
[2025-04-11 05:46:01] 2025-04-11 03:46:01,371 [wrapper] Pilot exit status: 0
[2025-04-11 05:46:01] 2025-04-11 03:46:01,375 [wrapper] pandaids: 6596558823
[2025-04-11 05:46:01] 2025-04-11 03:46:01,388 [wrapper] cleanup supervisor_pilot  305797 236588
[2025-04-11 05:46:01] 2025-04-11 03:46:01,389 [wrapper] Test setup, not cleaning
[2025-04-11 05:46:01] 2025-04-11 03:46:01,390 [wrapper] apfmon messages muted
[2025-04-11 05:46:01] 2025-04-11 03:46:01,391 [wrapper] ==== wrapper stdout END ====
[2025-04-11 05:46:01] 2025-04-11 03:46:01,392 [wrapper] ==== wrapper stderr END ====
[2025-04-11 05:46:01]  *** Error codes and diagnostics ***
[2025-04-11 05:46:01]     "exeErrorCode": 0,
[2025-04-11 05:46:01]     "exeErrorDiag": "",
[2025-04-11 05:46:01]     "pilotErrorCode": 0,
[2025-04-11 05:46:01]     "pilotErrorDiag": "",
[2025-04-11 05:46:01]  *** Listing of results directory ***
[2025-04-11 05:46:01] total 417488
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc    495897 Apr 10 20:50 pilot3.tar.gz
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc      5111 Apr 10 21:16 queuedata.json
[2025-04-11 05:46:01] -rwx------ 1 boinc boinc     37140 Apr 10 21:17 runpilot2-wrapper.sh
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc       100 Apr 11 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 05:46:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 11 04:24 run_atlas
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc       105 Apr 11 04:24 job.xml
[2025-04-11 05:46:01] -rw-r--r-- 2 boinc boinc     17569 Apr 11 04:24 start_atlas.sh
[2025-04-11 05:46:01] drwxrwx--x 2 boinc boinc      4096 Apr 11 04:24 shared
[2025-04-11 05:46:01] -rw-r--r-- 2 boinc boinc    508883 Apr 11 04:24 input.tar.gz
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc      9243 Apr 11 04:24 init_data.xml
[2025-04-11 05:46:01] -rw-r--r-- 2 boinc boinc 219520354 Apr 11 04:24 EVNT.44075162._001193.pool.root.1
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc         0 Apr 11 04:24 boinc_lockfile
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc      2550 Apr 11 04:24 pandaJob.out
[2025-04-11 05:46:01] -rw------- 1 boinc boinc       424 Apr 11 04:24 setup.sh.local
[2025-04-11 05:46:01] -rw------- 1 boinc boinc    987284 Apr 11 04:24 agis_schedconf.cvmfs.json
[2025-04-11 05:46:01] -rw------- 1 boinc boinc   1603528 Apr 11 04:24 agis_ddmendpoints.agis.ALL.json
[2025-04-11 05:46:01] drwx------ 4 boinc boinc      4096 Apr 11 04:24 pilot3
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc       529 Apr 11 05:45 boinc_task_state.xml
[2025-04-11 05:46:01] -rw------- 1 boinc boinc        95 Apr 11 05:45 pilot_heartbeat.json
[2025-04-11 05:46:01] -rw------- 1 boinc boinc 202654625 Apr 11 05:45 HITS.44075164._030146.pool.root.1
[2025-04-11 05:46:01] -rw------- 1 boinc boinc      1015 Apr 11 05:45 memory_monitor_summary.json
[2025-04-11 05:46:01] -rw------- 1 boinc boinc    253212 Apr 11 05:45 log.44075164._030146.job.log.tgz.1
[2025-04-11 05:46:01] -rw------- 1 boinc boinc      7669 Apr 11 05:45 heartbeat.json
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc        27 Apr 11 05:46 wrapper_checkpoint.txt
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc      8192 Apr 11 05:46 boinc_mmap_file
[2025-04-11 05:46:01] -rw------- 1 boinc boinc      4558 Apr 11 05:46 pilotlog.txt
[2025-04-11 05:46:01] -rw------- 1 boinc boinc    489649 Apr 11 05:46 log.44075164._030146.job.log.1
[2025-04-11 05:46:01] -rw------- 1 boinc boinc       357 Apr 11 05:46 output.list
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc       620 Apr 11 05:46 runtime_log
[2025-04-11 05:46:01] -rw------- 1 boinc boinc    757760 Apr 11 05:46 result.tar.gz
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc     11161 Apr 11 05:46 runtime_log.err
[2025-04-11 05:46:01] -rw------- 1 boinc boinc       653 Apr 11 05:46 2mtMDm0ZCN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmp1OLDmhOH5Uo.diag
[2025-04-11 05:46:01] -rw-r--r-- 1 boinc boinc     21987 Apr 11 05:46 stderr.txt
[2025-04-11 05:46:01] HITS file was successfully produced:
[2025-04-11 05:46:01] -rw------- 1 boinc boinc 202654625 Apr 11 05:45 shared/HITS.pool.root.1
[2025-04-11 05:46:01]  *** Contents of shared directory: ***
[2025-04-11 05:46:01] total 413552
[2025-04-11 05:46:01] -rw-r--r-- 2 boinc boinc     17569 Apr 11 04:24 start_atlas.sh
[2025-04-11 05:46:01] -rw-r--r-- 2 boinc boinc    508883 Apr 11 04:24 input.tar.gz
[2025-04-11 05:46:01] -rw-r--r-- 2 boinc boinc 219520354 Apr 11 04:24 ATLAS.root_0
[2025-04-11 05:46:01] -rw------- 1 boinc boinc 202654625 Apr 11 05:45 HITS.pool.root.1
[2025-04-11 05:46:01] -rw------- 1 boinc boinc    757760 Apr 11 05:46 result.tar.gz
05:46:02 (232843): run_atlas exited; CPU time 16737.102480
05:46:02 (232843): called boinc_finish(0)

</stderr_txt>
]]>

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