Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:26:35 (25220): wrapper (7.7.26015): starting
17:26:35 (25220): wrapper: running run_atlas (--nthreads 10)
[2025-04-10 17:26:35] Arguments: --nthreads 10
[2025-04-10 17:26:35] Threads: 10
[2025-04-10 17:26:35] Checking for CVMFS
[2025-04-10 17:26:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-10 17:26:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-10 17:26:37] Running cvmfs_config stat atlas.cern.ch
[2025-04-10 17:26:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-10 17:26:40] 2.11.2.0 31676 29927 218404 144739 0 268 13020886 18432000 12325 130560 0 132934277 98.972 319612491 35998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-10 17:26:40] CVMFS is ok
[2025-04-10 17:26:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-10 17:26:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-10 17:26:40] Further information can be found at the LHC@home message board.
[2025-04-10 17:26:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-10 17:26:40] Checking for apptainer binary...
[2025-04-10 17:26:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-10 17:26:40] Running /usr/bin/apptainer --version
[2025-04-10 17:26:41] apptainer version 1.3.2-1.el7
[2025-04-10 17:26:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-10 17:27:17] c-210-5.aglt2.org
[2025-04-10 17:27:17] apptainer works
[2025-04-10 17:27:17] Set ATHENA_PROC_NUMBER=10
[2025-04-10 17:27:17] Set ATHENA_CORE_NUMBER=10
[2025-04-10 17:27:17] Starting ATLAS job with PandaID=6596323265
[2025-04-10 17:27:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 19:11:52]  *** The last 200 lines of the pilot log: ***
[2025-04-11 19:11:52] 2025-04-11 23:11:04,618 | INFO     | monitor loop #3827: job 0:6596323265 is in state 'finished'
[2025-04-11 19:11:52] 2025-04-11 23:11:04,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:11:52] 2025-04-11 23:11:07,234 | INFO     | monitor loop #3828: job 0:6596323265 is in state 'finished'
[2025-04-11 19:11:52] 2025-04-11 23:11:07,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:11:52] 2025-04-11 23:11:08,962 | INFO     | PID=10399 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-11 19:11:52] 2025-04-11 23:11:08,962 | INFO     | .. there are 41 such processes running
[2025-04-11 19:11:52] 2025-04-11 23:11:09,802 | INFO     | monitor loop #3829: job 0:6596323265 is in state 'finished'
[2025-04-11 19:11:52] 2025-04-11 23:11:09,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:11:52] 2025-04-11 23:11:12,308 | INFO     | monitor loop #3830: job 0:6596323265 is in state 'finished'
[2025-04-11 19:11:52] 2025-04-11 23:11:12,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:11:52] 2025-04-11 23:11:14,821 | INFO     | monitor loop #3831: job 0:6596323265 is in state 'finished'
[2025-04-11 19:11:52] 2025-04-11 23:11:14,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:11:52] 2025-04-11 23:11:17,330 | INFO     | monitor loop #3832: job 0:6596323265 is in state 'finished'
[2025-04-11 19:11:52] 2025-04-11 23:11:17,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 19:11:52] 2025-04-11 23:11:17,459 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-11 19:11:52] 2025-04-11 23:11:17,460 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6596323265/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 19:11:52] 2025-04-11 23:11:17,464 | INFO     | extracted standard info from prmon json
[2025-04-11 19:11:52] 2025-04-11 23:11:17,465 | INFO     | extracted standard memory fields from prmon json
[2025-04-11 19:11:52] 2025-04-11 23:11:17,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-11 19:11:52] 2025-04-11 23:11:17,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-11 19:11:52] 2025-04-11 23:11:17,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-11 19:11:52] 2025-04-11 23:11:17,505 | INFO     | fitting pss+swap vs Time
[2025-04-11 19:11:52] 2025-04-11 23:11:17,508 | INFO     | sum of square deviations: 1054930645210.5098
[2025-04-11 19:11:52] 2025-04-11 23:11:17,710 | INFO     | sum of deviations: 3718937105484.4775
[2025-04-11 19:11:52] 2025-04-11 23:11:17,710 | INFO     | mean x: 1744367110.137633
[2025-04-11 19:11:52] 2025-04-11 23:11:17,710 | INFO     | mean y: 2511084.770611702
[2025-04-11 19:11:52] 2025-04-11 23:11:17,711 | INFO     | -- intersect: -6146889921.760072
[2025-04-11 19:11:52] 2025-04-11 23:11:17,718 | INFO     | intersect: -6146889921.760072
[2025-04-11 19:11:52] 2025-04-11 23:11:17,753 | INFO     | chi2: 26.091099705505226
[2025-04-11 19:11:52] 2025-04-11 23:11:17,775 | INFO     | sum of square deviations: 1044445134682.0563
[2025-04-11 19:11:52] 2025-04-11 23:11:18,131 | INFO     | sum of deviations: 4228854046166.604
[2025-04-11 19:11:52] 2025-04-11 23:11:18,131 | INFO     | mean x: 1744366957.6430955
[2025-04-11 19:11:52] 2025-04-11 23:11:18,132 | INFO     | mean y: 2518500.715143429
[2025-04-11 19:11:52] 2025-04-11 23:11:18,132 | INFO     | -- intersect: -7060249108.493833
[2025-04-11 19:11:52] 2025-04-11 23:11:18,132 | INFO     | intersect: -7060249108.493833
[2025-04-11 19:11:52] 2025-04-11 23:11:18,154 | INFO     | chi2: 22.228801728994178
[2025-04-11 19:11:52] 2025-04-11 23:11:18,154 | INFO     | current chi2=22.228801728994178 (change=14.80312451412733 %)
[2025-04-11 19:11:52] 2025-04-11 23:11:18,154 | INFO     | right removable region: 1498
[2025-04-11 19:11:52] 2025-04-11 23:11:18,157 | INFO     | sum of square deviations: 1044443632252.0571
[2025-04-11 19:11:52] 2025-04-11 23:11:18,460 | INFO     | sum of deviations: 3153534358401.5103
[2025-04-11 19:11:52] 2025-04-11 23:11:18,461 | INFO     | mean x: 1744367262.6430955
[2025-04-11 19:11:52] 2025-04-11 23:11:18,461 | INFO     | mean y: 2519306.7598398933
[2025-04-11 19:11:52] 2025-04-11 23:11:18,461 | INFO     | -- intersect: -5264325093.980637
[2025-04-11 19:11:52] 2025-04-11 23:11:18,461 | INFO     | intersect: -5264325093.980637
[2025-04-11 19:11:52] 2025-04-11 23:11:18,501 | INFO     | chi2: 20.933808988806653
[2025-04-11 19:11:52] 2025-04-11 23:11:18,501 | INFO     | current chi2=20.933808988806653 (change=19.766475062031912 %)
[2025-04-11 19:11:52] 2025-04-11 23:11:18,501 | INFO     | left removable region: 10
[2025-04-11 19:11:52] 2025-04-11 23:11:18,503 | INFO     | sum of square deviations: 1021619101487.1393
[2025-04-11 19:11:52] 2025-04-11 23:11:19,016 | INFO     | sum of deviations: 3282095504712.3022
[2025-04-11 19:11:52] 2025-04-11 23:11:19,017 | INFO     | mean x: 1744367232.155242
[2025-04-11 19:11:52] 2025-04-11 23:11:19,017 | INFO     | mean y: 2535552.4099462368
[2025-04-11 19:11:52] 2025-04-11 23:11:19,017 | INFO     | -- intersect: -5601490295.276528
[2025-04-11 19:11:52] 2025-04-11 23:11:19,017 | INFO     | intersect: -5601490295.276528
[2025-04-11 19:11:52] 2025-04-11 23:11:19,019 | INFO     | chi2: 12.405087141255287
[2025-04-11 19:11:52] 2025-04-11 23:11:19,020 | INFO     | -- intersect: -5601490295.276528
[2025-04-11 19:11:52] 2025-04-11 23:11:19,020 | INFO     | current memory leak: 3.21 B/s (using 1488 data points, chi2=12.41)
[2025-04-11 19:11:52] 2025-04-11 23:11:19,022 | INFO     | ..............................
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | . Timing measurements:
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | . get job = 3 s
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | . initial setup = 23 s
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | . payload setup = 188 s
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | . stage-in = 1 s
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | . payload execution = 91863 s
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | . stage-out = 18 s
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | . log creation = 5 s
[2025-04-11 19:11:52] 2025-04-11 23:11:19,023 | INFO     | ..............................
[2025-04-11 19:11:52] 2025-04-11 23:11:19,186 | INFO     | 
[2025-04-11 19:11:52] 2025-04-11 23:11:19,186 | INFO     | job summary report
[2025-04-11 19:11:52] 2025-04-11 23:11:19,186 | INFO     | --------------------------------------------------
[2025-04-11 19:11:52] 2025-04-11 23:11:19,186 | INFO     | PanDA job id: 6596323265
[2025-04-11 19:11:52] 2025-04-11 23:11:19,186 | INFO     | task id: 44075164
[2025-04-11 19:11:52] 2025-04-11 23:11:19,186 | INFO     | errors: (none)
[2025-04-11 19:11:52] 2025-04-11 23:11:19,186 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | pilot state: finished 
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | transexitcode: 0
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | exeerrorcode: 0
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | exeerrordiag: 
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | exitcode: 0
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | exitmsg: OK
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | cpuconsumptiontime: 60720 s
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | nevents: 400
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | neventsw: 0
[2025-04-11 19:11:52] 2025-04-11 23:11:19,187 | INFO     | pid: 19989
[2025-04-11 19:11:52] 2025-04-11 23:11:19,188 | INFO     | pgrp: 19989
[2025-04-11 19:11:52] 2025-04-11 23:11:19,188 | INFO     | corecount: 10
[2025-04-11 19:11:52] 2025-04-11 23:11:19,188 | INFO     | event service: False
[2025-04-11 19:11:52] 2025-04-11 23:11:19,188 | INFO     | sizes: {0: 2416498, 2: 2417099, 3: 2417183, 5: 2417438, 7: 2417438, 8: 2417466, 19: 2417622, 31: 2417650, 42: 2417678, 53: 2417734, 64: 2417762, 76: 2418098, 87: 2
[2025-04-11 19:11:52] 2025-04-11 23:11:19,188 | INFO     | --------------------------------------------------
[2025-04-11 19:11:52] 2025-04-11 23:11:19,188 | INFO     | 
[2025-04-11 19:11:52] 2025-04-11 23:11:19,188 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-11 19:11:52] 2025-04-11 23:11:19,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 19:11:52] 2025-04-11 23:11:19,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 19:11:52] 2025-04-11 23:11:19,630 | INFO     | job 6596323265 has completed (purged errors)
[2025-04-11 19:11:52] 2025-04-11 23:11:19,630 | INFO     | overall cleanup function is called
[2025-04-11 19:11:52] 2025-04-11 23:11:20,652 | INFO     | --- collectZombieJob: --- 10, [19989]
[2025-04-11 19:11:52] 2025-04-11 23:11:20,652 | INFO     | zombie collector waiting for pid 19989
[2025-04-11 19:11:52] 2025-04-11 23:11:20,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 19:11:52] 2025-04-11 23:11:20,652 | INFO     | collected zombie processes
[2025-04-11 19:11:52] 2025-04-11 23:11:20,652 | INFO     | will attempt to kill all subprocesses of pid=19989
[2025-04-11 19:11:52] 2025-04-11 23:11:26,585 | INFO     | process IDs to be killed: [19989] (in reverse order)
[2025-04-11 19:11:52] 2025-04-11 23:11:30,462 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 19:11:52] 2025-04-11 23:11:30,463 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 19:11:52] 2025-04-11 23:11:30,781 | INFO     | did not find any defunct processes belonging to 19989
[2025-04-11 19:11:52] 2025-04-11 23:11:30,998 | INFO     | did not find any defunct processes belonging to 19989
[2025-04-11 19:11:52] 2025-04-11 23:11:30,998 | INFO     | ready for new job
[2025-04-11 19:11:52] 2025-04-11 23:11:30,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 19:11:52] 2025-04-11 23:11:31,074 | INFO     | **************************************
[2025-04-11 19:11:52] 2025-04-11 23:11:31,074 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-11 19:11:52] 2025-04-11 23:11:31,074 | INFO     | **************************************
[2025-04-11 19:11:52] 2025-04-11 23:11:31,074 | INFO     | 
[2025-04-11 19:11:52] 2025-04-11 23:11:31,102 | INFO     | architecture information:
[2025-04-11 19:11:52] 2025-04-11 23:11:31,138 | INFO     | executing command: cat /etc/os-release
[2025-04-11 19:11:52] 2025-04-11 23:11:31,335 | INFO     | cat /etc/os-release:
[2025-04-11 19:11:52] NAME="CentOS Linux"
[2025-04-11 19:11:52] VERSION="7 (Core)"
[2025-04-11 19:11:52] ID="centos"
[2025-04-11 19:11:52] ID_LIKE="rhel fedora"
[2025-04-11 19:11:52] VERSION_ID="7"
[2025-04-11 19:11:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 19:11:52] ANSI_COLOR="0;31"
[2025-04-11 19:11:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 19:11:52] HOME_URL="https://www.centos.org/"
[2025-04-11 19:11:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 19:11:52] 
[2025-04-11 19:11:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 19:11:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 19:11:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 19:11:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 19:11:52] 
[2025-04-11 19:11:52] 2025-04-11 23:11:31,335 | INFO     | **************************************
[2025-04-11 19:11:52] 2025-04-11 23:11:31,847 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-11 19:11:52] 2025-04-11 23:11:32,033 | INFO     | sufficient remaining disk space (57044631552 B)
[2025-04-11 19:11:52] 2025-04-11 23:11:32,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 19:11:52] 2025-04-11 23:11:32,033 | INFO     | current server update state: UPDATING_FINAL
[2025-04-11 19:11:52] 2025-04-11 23:11:32,033 | INFO     | update_server=False
[2025-04-11 19:11:52] 2025-04-11 23:11:32,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 19:11:52] 2025-04-11 23:11:32,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 19:11:52] 2025-04-11 23:11:32,034 | INFO     | aborting loop
[2025-04-11 19:11:52] 2025-04-11 23:11:32,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 19:11:52] 2025-04-11 23:11:32,459 | INFO     | all payload control threads have been joined
[2025-04-11 19:11:52] 2025-04-11 23:11:32,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 19:11:52] 2025-04-11 23:11:33,241 | INFO     | [job] job monitor thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,247 | INFO     | [job] retrieve thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,255 | INFO     | all data control threads have been joined
[2025-04-11 19:11:52] 2025-04-11 23:11:33,372 | INFO     | [payload] validate_post thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,421 | INFO     | [job] queue monitor thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,440 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,456 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,465 | INFO     | [job] validate thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,473 | INFO     | [payload] control thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:33,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 19:11:52] 2025-04-11 23:11:33,623 | INFO     | [payload] failed_post thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:34,164 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:34,191 | INFO     | all job control threads have been joined
[2025-04-11 19:11:52] 2025-04-11 23:11:34,191 | INFO     | [data] copytool_in thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:34,276 | INFO     | [data] control thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:35,217 | INFO     | [job] control thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:35,532 | INFO     | [data] copytool_out thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:36,263 | INFO     | PID=10399 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-11 19:11:52] 2025-04-11 23:11:36,268 | INFO     | .. there are 41 such processes running
[2025-04-11 19:11:52] 2025-04-11 23:11:36,268 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 19:11:52] 2025-04-11 23:11:36,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 19:11:52] 2025-04-11 23:11:36,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 19:11:52] 2025-04-11 23:11:36,534 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 19:11:52] 2025-04-11 23:11:37,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474287560512)>', '<ExcThread(monitor, started 140473976989440)>']
[2025-04-11 19:11:52] 2025-04-11 23:11:38,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 19:11:52] 2025-04-11 23:11:38,278 | INFO     | [monitor] control thread has ended
[2025-04-11 19:11:52] 2025-04-11 23:11:42,667 | INFO     | all workflow threads have been joined
[2025-04-11 19:11:52] 2025-04-11 23:11:42,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 19:11:52] 2025-04-11 23:11:42,667 | INFO     | traces error code: 0
[2025-04-11 19:11:52] 2025-04-11 23:11:42,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 19:11:52] 2025-04-11 23:11:47,599 [wrapper] ==== pilot stdout END ====
[2025-04-11 19:11:52] 2025-04-11 23:11:47,640 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 19:11:52] 2025-04-11 23:11:47,685 [wrapper] pilotpid: 10399
[2025-04-11 19:11:52] 2025-04-11 23:11:47,727 [wrapper] Pilot exit status: 0
[2025-04-11 19:11:52] 2025-04-11 23:11:47,930 [wrapper] pandaids: 6596323265
[2025-04-11 19:11:52] 2025-04-11 23:11:48,854 [wrapper] cleanup supervisor_pilot 32056 10400
[2025-04-11 19:11:52] 2025-04-11 23:11:48,898 [wrapper] Test setup, not cleaning
[2025-04-11 19:11:52] 2025-04-11 23:11:48,934 [wrapper] apfmon messages muted
[2025-04-11 19:11:52] 2025-04-11 23:11:49,039 [wrapper] ==== wrapper stdout END ====
[2025-04-11 19:11:52] 2025-04-11 23:11:49,091 [wrapper] ==== wrapper stderr END ====
[2025-04-11 19:11:52]  *** Error codes and diagnostics ***
[2025-04-11 19:11:52]     "exeErrorCode": 0,
[2025-04-11 19:11:52]     "exeErrorDiag": "",
[2025-04-11 19:11:52]     "pilotErrorCode": 0,
[2025-04-11 19:11:52]     "pilotErrorDiag": "",
[2025-04-11 19:11:52]  *** Listing of results directory ***
[2025-04-11 19:11:52] total 421984
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas    495897 Apr 10 13:35 pilot3.tar.gz
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas      5111 Apr 10 13:35 queuedata.json
[2025-04-11 19:11:52] -rwx------ 1 boincer umatlas     37140 Apr 10 13:36 runpilot2-wrapper.sh
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas       100 Apr 10 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 19:11:52] -rwxr-xr-x 1 boincer umatlas      7986 Apr 10 17:26 run_atlas
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas       105 Apr 10 17:26 job.xml
[2025-04-11 19:11:52] -rw-r--r-- 2 boincer umatlas 222589492 Apr 10 17:26 EVNT.44075162._001160.pool.root.1
[2025-04-11 19:11:52] -rw-r--r-- 2 boincer umatlas     17569 Apr 10 17:26 start_atlas.sh
[2025-04-11 19:11:52] drwxrwx--x 2 boincer umatlas      4096 Apr 10 17:26 shared
[2025-04-11 19:11:52] -rw-r--r-- 2 boincer umatlas    508883 Apr 10 17:26 input.tar.gz
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas         0 Apr 10 17:26 boinc_lockfile
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas      2549 Apr 10 17:27 pandaJob.out
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas       467 Apr 10 17:27 setup.sh.local
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas    986213 Apr 10 17:31 agis_schedconf.cvmfs.json
[2025-04-11 19:11:52] drwx------ 4 boincer umatlas      4096 Apr 10 17:31 pilot3
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas      6228 Apr 11 19:00 init_data.xml
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas 192629040 Apr 11 19:03 HITS.44075164._029260.pool.root.1
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas       531 Apr 11 19:03 boinc_task_state.xml
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas      1058 Apr 11 19:09 memory_monitor_summary.json
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas   1603529 Apr 11 19:09 agis_ddmendpoints.agis.ALL.json
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas    962828 Apr 11 19:09 log.44075164._029260.job.log.tgz.1
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas        95 Apr 11 19:10 pilot_heartbeat.json
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas      7764 Apr 11 19:11 heartbeat.json
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas        28 Apr 11 19:11 wrapper_checkpoint.txt
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas      4746 Apr 11 19:11 pilotlog.txt
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas   5558343 Apr 11 19:11 log.44075164._029260.job.log.1
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas       357 Apr 11 19:11 output.list
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas       620 Apr 11 19:11 runtime_log
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas   6543360 Apr 11 19:11 result.tar.gz
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas      8192 Apr 11 19:11 boinc_mmap_file
[2025-04-11 19:11:52] -rw------- 1 boincer umatlas       664 Apr 11 19:11 sEWLDm8zAN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmT3wKDmakD8kn.diag
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas     11416 Apr 11 19:11 runtime_log.err
[2025-04-11 19:11:52] -rw-r--r-- 1 boincer umatlas     21607 Apr 11 19:11 stderr.txt
[2025-04-11 19:11:53] HITS file was successfully produced:
[2025-04-11 19:11:53] -rw------- 1 boincer umatlas 192629040 Apr 11 19:03 shared/HITS.pool.root.1
[2025-04-11 19:11:53]  *** Contents of shared directory: ***
[2025-04-11 19:11:53] total 412408
[2025-04-11 19:11:53] -rw-r--r-- 2 boincer umatlas 222589492 Apr 10 17:26 ATLAS.root_0
[2025-04-11 19:11:53] -rw-r--r-- 2 boincer umatlas     17569 Apr 10 17:26 start_atlas.sh
[2025-04-11 19:11:53] -rw-r--r-- 2 boincer umatlas    508883 Apr 10 17:26 input.tar.gz
[2025-04-11 19:11:53] -rw------- 1 boincer umatlas 192629040 Apr 11 19:03 HITS.pool.root.1
[2025-04-11 19:11:53] -rw------- 1 boincer umatlas   6543360 Apr 11 19:11 result.tar.gz
19:11:55 (25220): run_atlas exited; CPU time 63929.842007
19:11:55 (25220): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN