Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-13 12:10:30 (70354): Detected: vboxwrapper 26206
2025-04-13 12:10:30 (70354): Detected: BOINC client v7.24.1
2025-04-13 12:10:31 (70354): Detected: VirtualBox VboxManage Interface (Version: 6.1.30)
2025-04-13 12:10:31 (70354): Detected: Sandbox Configuration Enabled
2025-04-13 12:10:31 (70354): Successfully copied 'init_data.xml' to the shared directory.
2025-04-13 12:10:31 (70354): Create VM. (boinc_849c51218b3c013d, slot#0)
2025-04-13 12:10:31 (70354): Setting Memory Size for VM. (4400MB)
2025-04-13 12:10:31 (70354): Setting CPU Count for VM. (4)
2025-04-13 12:10:31 (70354): Setting Chipset Options for VM.
2025-04-13 12:10:31 (70354): Setting Graphics Controller Options for VM.
2025-04-13 12:10:31 (70354): Setting Boot Options for VM.
2025-04-13 12:10:31 (70354): Setting Network Configuration for NAT.
2025-04-13 12:10:31 (70354): Enabling VM Network Access.
2025-04-13 12:10:32 (70354): Disabling USB Support for VM.
2025-04-13 12:10:32 (70354): Disabling COM Port Support for VM.
2025-04-13 12:10:32 (70354): Disabling Audio Support for VM.
2025-04-13 12:10:32 (70354): Disabling Clipboard Support for VM.
2025-04-13 12:10:32 (70354): Disabling Drag and Drop Support for VM.
2025-04-13 12:10:32 (70354): Adding storage controller(s) to VM.
2025-04-13 12:10:32 (70354): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-13 12:10:32 (70354): Adding VirtualBox Guest Additions to VM.
2025-04-13 12:10:32 (70354): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-13 12:10:32 (70354): forwarding host port 62283 to guest port 80
2025-04-13 12:10:32 (70354): Enabling remote desktop for VM.
2025-04-13 12:10:33 (70354): Required extension pack not installed, remote desktop not enabled.
2025-04-13 12:10:33 (70354): Enabling shared directory for VM.
2025-04-13 12:10:33 (70354): Starting VM using VBoxManage interface. (boinc_849c51218b3c013d, slot#0)
2025-04-13 12:10:34 (70354): Successfully started VM. (PID = '70421')
2025-04-13 12:10:34 (70354): Reporting VM Process ID to BOINC.
2025-04-13 12:10:34 (70354): Guest Log: BIOS: VirtualBox 6.1.30
2025-04-13 12:10:34 (70354): Guest Log: CPUID EDX: 0x178bfbff
2025-04-13 12:10:34 (70354): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-13 12:10:34 (70354): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-13 12:10:34 (70354): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-13 12:10:34 (70354): Detected: Web Application Enabled (http://localhost:62283)
2025-04-13 12:10:34 (70354): Preference change detected
2025-04-13 12:10:34 (70354): Setting CPU throttle for VM. (40%)
2025-04-13 12:10:34 (70354): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-13 12:10:36 (70354): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-13 12:10:36 (70354): Guest Log: BIOS: Booting from Hard Disk...
2025-04-13 12:10:41 (70354): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-13 12:10:41 (70354): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-13 12:10:41 (70354): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-13 12:10:52 (70354): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-13 12:10:52 (70354): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-13 12:11:08 (70354): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-13 12:11:08 (70354): Guest Log: 00:00:00.000214 main     Log opened 2025-04-13T19:11:05.585245000Z
2025-04-13 12:11:08 (70354): Guest Log: 00:00:00.000418 main     OS Product: Linux
2025-04-13 12:11:08 (70354): Guest Log: 00:00:00.000502 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-13 12:11:08 (70354): Guest Log: 00:00:00.000582 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-13 12:11:08 (70354): Guest Log: 00:00:00.000737 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-13 12:11:08 (70354): Guest Log: 00:00:00.000739 main     Process ID: 1322
2025-04-13 12:11:08 (70354): Guest Log: 00:00:00.000740 main     Package type: LINUX_64BITS_GENERIC
2025-04-13 12:11:08 (70354): Guest Log: 00:00:00.002367 main     5.2.32 r132073 started. Verbose level = 0
2025-04-13 12:11:09 (70354): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-13 12:11:09 (70354): Guest Log: [INFO] Mounting shared directory
2025-04-13 12:11:09 (70354): Guest Log: [INFO] Checking for init_data.xml
2025-04-13 12:11:15 (70354): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-13 12:11:15 (70354): Guest Log: [INFO] Detected branch: prod
2025-04-13 12:11:16 (70354): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-13 12:11:16 (70354): Guest Log: Copying input files
2025-04-13 12:11:20 (70354): Guest Log: Copied input files into RunAtlas.
2025-04-13 12:11:22 (70354): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-13 12:11:22 (70354): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-13 12:11:22 (70354): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-13 12:11:22 (70354): Guest Log: Further information can be found at the LHC@home message board.
2025-04-13 12:11:33 (70354): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-13 12:11:34 (70354): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-13 12:11:34 (70354): Guest Log: 2.6.3.0 1600 0 30184 144821 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-13 12:11:35 (70354): Guest Log: copied the webapp to /var/www
2025-04-13 12:11:35 (70354): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-13 12:11:35 (70354): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-13 12:11:35 (70354): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-13 12:11:35 (70354): Guest Log:  *** Starting ATLAS job. (PandaID=6596321790 taskID=44075164) ***
2025-04-13 13:49:58 (70354): Status Report: Elapsed Time: '6000.000000'
2025-04-13 13:49:58 (70354): Status Report: CPU Time: '7147.980000'
2025-04-13 15:29:21 (70354): Status Report: Elapsed Time: '12000.000000'
2025-04-13 15:29:21 (70354): Status Report: CPU Time: '16394.160000'
2025-04-13 17:08:44 (70354): Status Report: Elapsed Time: '18000.000000'
2025-04-13 17:08:44 (70354): Status Report: CPU Time: '25640.750000'
2025-04-13 18:48:08 (70354): Status Report: Elapsed Time: '24000.000000'
2025-04-13 18:48:08 (70354): Status Report: CPU Time: '34886.560000'
2025-04-13 20:27:31 (70354): Status Report: Elapsed Time: '30000.000000'
2025-04-13 20:27:31 (70354): Status Report: CPU Time: '44134.410000'
2025-04-13 22:06:54 (70354): Status Report: Elapsed Time: '36000.000000'
2025-04-13 22:06:54 (70354): Status Report: CPU Time: '53376.980000'
2025-04-13 23:00:03 (70354): VM state change detected. (old = 'running', new = 'paused')
2025-04-14 02:00:01 (70354): VM state change detected. (old = 'paused', new = 'running')
2025-04-14 02:00:09 (70354): Guest Log: 10:49:05.163791 timesync vgsvcTimeSyncWorker: Radical host time change: 10 807 785 000 000ns (HostNow=1 744 621 208 476 000 000 ns HostLast=1 744 610 400 691 000 000 ns)
2025-04-14 02:00:19 (70354): Guest Log: 10:49:15.164807 timesync vgsvcTimeSyncWorker: Radical guest time change: 10 807 935 467 000ns (GuestNow=1 744 621 218 580 503 000 ns GuestLast=1 744 610 410 645 036 000 ns fSetTimeLastLoop=true )
2025-04-14 02:46:17 (70354): Status Report: Elapsed Time: '42000.000000'
2025-04-14 02:46:17 (70354): Status Report: CPU Time: '62620.170000'
2025-04-14 03:44:53 (70354): Guest Log:  *** Job finished ***
2025-04-14 03:44:53 (70354): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:39,731 | INFO     | [job] create_data_payload thread has finished
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:39,732 | INFO     | [payload] run_realtimelog thread has finished
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:42,847 | INFO     | [data] queue_monitor thread has finished
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:44,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097611020096)>', '<ExcThread(monitor, started 140097169110784)>']
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:45,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:45,342 | INFO     | [monitor] control thread has ended
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:49,891 | INFO     | all workflow threads have been joined
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:49,891 | INFO     | end of generic workflow (traces error code: 0)
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:49,892 | INFO     | traces error code: 0
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:49,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,154 [wrapper] ==== pilot stdout END ====
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,162 [wrapper] ==== wrapper stdout RESUME ====
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,172 [wrapper] pilotpid: 5924
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,181 [wrapper] Pilot exit status: 0
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,282 [wrapper] pandaids: 6596321790
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,342 [wrapper] cleanup supervisor_pilot 12342 5925
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,352 [wrapper] Test setup, not cleaning
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,361 [wrapper] apfmon messages muted
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,371 [wrapper] ==== wrapper stdout END ====
2025-04-14 03:44:53 (70354): Guest Log: 2025-04-14 10:44:50,380 [wrapper] ==== wrapper stderr END ====
2025-04-14 03:44:53 (70354): Guest Log:  *** Error codes and diagnostics ***
2025-04-14 03:44:53 (70354): Guest Log:     "exeErrorCode": 0,
2025-04-14 03:44:53 (70354): Guest Log:     "exeErrorDiag": "",
2025-04-14 03:44:53 (70354): Guest Log:     "pilotErrorCode": 0,
2025-04-14 03:44:53 (70354): Guest Log:     "pilotErrorDiag": "",
2025-04-14 03:44:53 (70354): Guest Log:  *** Listing of results directory ***
2025-04-14 03:44:53 (70354): Guest Log: total 193600
2025-04-14 03:44:53 (70354): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 10 15:55 pilot3.tar.gz
2025-04-14 03:44:53 (70354): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 10 16:31 queuedata.json
2025-04-14 03:44:53 (70354): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 10 16:31 runpilot2-wrapper.sh
2025-04-14 03:44:53 (70354): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 13 19:11 start_atlas.sh
2025-04-14 03:44:53 (70354): Guest Log: -rw-r-----. 1 atlas atlas    508889 Apr 13 19:11 input.tar.gz
2025-04-14 03:44:53 (70354): Guest Log: -rw-r--r--. 1 atlas atlas      8575 Apr 13 19:11 init_data.xml
2025-04-14 03:44:53 (70354): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 13 19:11 EVNT.44075162._001136.pool.root.1 -> /data/./ATLAS.root_0
2025-04-14 03:44:53 (70354): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 13 19:11 pandaJob.out
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas       424 Apr 13 19:11 setup.sh.local
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas    985904 Apr 13 19:12 agis_schedconf.cvmfs.json
2025-04-14 03:44:53 (70354): Guest Log: drwx------. 4 atlas atlas      4096 Apr 13 19:12 pilot3
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas 188093191 Apr 14 10:42 HITS.44075164._028643.pool.root.1
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas      1036 Apr 14 10:43 memory_monitor_summary.json
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 14 10:44 agis_ddmendpoints.agis.ALL.json
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas        98 Apr 14 10:44 pilot_heartbeat.json
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas    496966 Apr 14 10:44 log.44075164._028643.job.log.tgz.1
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas      7747 Apr 14 10:44 heartbeat.json
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas      4599 Apr 14 10:44 pilotlog.txt
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas   2690767 Apr 14 10:44 log.44075164._028643.job.log.1
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas       357 Apr 14 10:44 output.list
2025-04-14 03:44:53 (70354): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 14 10:44 runtime_log
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas   3205120 Apr 14 10:44 result.tar.gz
2025-04-14 03:44:53 (70354): Guest Log: -rw-r--r--. 1 atlas atlas     10975 Apr 14 10:44 runtime_log.err
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas       671 Apr 14 10:44 rd9LDm7y9M7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmbzwKDm1QyMYn.diag
2025-04-14 03:44:53 (70354): Guest Log: Looking for outputfile HITS.44075164._028643.pool.root.1
2025-04-14 03:44:53 (70354): Guest Log: HITS file was successfully produced
2025-04-14 03:44:53 (70354): Guest Log: -rw-------. 1 atlas atlas 188093191 Apr 14 10:42 /home/atlas/RunAtlas/HITS.44075164._028643.pool.root.1
2025-04-14 03:44:53 (70354): Guest Log: Successfully finished the ATLAS job!
2025-04-14 03:44:53 (70354): Guest Log: Copying the results back to the shared directory!
2025-04-14 03:44:53 (70354): Guest Log:  *** Contents of shared directory: ***
2025-04-14 03:44:54 (70354): Guest Log: total 217684
2025-04-14 03:44:54 (70354): Guest Log: -rw-rw----. 1 root root 218895188 Apr 13 19:10 ATLAS.root_0
2025-04-14 03:44:54 (70354): Guest Log: -rw-rw-r--. 1 root root      8575 Apr 13 19:10 init_data.xml
2025-04-14 03:44:54 (70354): Guest Log: -rw-rw----. 1 root root    508889 Apr 13 19:10 input.tar.gz
2025-04-14 03:44:54 (70354): Guest Log: -rw-r--r--. 1 root root   3205120 Apr 14 10:44 result.tar.gz
2025-04-14 03:44:54 (70354): Guest Log: -rw-rw----. 1 root root     17569 Apr 13 19:10 start_atlas.sh
2025-04-14 03:44:54 (70354): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-14 03:44:54 (70354): VM Completion File Detected.
2025-04-14 03:44:54 (70354): Powering off VM.
2025-04-14 03:44:55 (70354): Successfully stopped VM.
2025-04-14 03:44:55 (70354): Deregistering VM. (boinc_849c51218b3c013d, slot#0)
2025-04-14 03:44:55 (70354): Removing network bandwidth throttle group from VM.
2025-04-14 03:44:55 (70354): Removing VM from VirtualBox.
03:45:00 (70354): called boinc_finish(0)

</stderr_txt>
]]>

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