Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-11 10:10:42 (6320): Detected: vboxwrapper 26206
2025-04-11 10:10:42 (6320): Detected: BOINC client v8.0.2
2025-04-11 10:10:42 (6320): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-11 10:10:43 (6320): Successfully copied 'init_data.xml' to the shared directory.
2025-04-11 10:10:43 (6320): Create VM. (boinc_6d2ef44883fcb6fe, slot#9)
2025-04-11 10:10:44 (6320): Setting Memory Size for VM. (4800MB)
2025-04-11 10:10:44 (6320): Setting CPU Count for VM. (8)
2025-04-11 10:10:44 (6320): Setting Chipset Options for VM.
2025-04-11 10:10:45 (6320): Setting Graphics Controller Options for VM.
2025-04-11 10:10:45 (6320): Setting Boot Options for VM.
2025-04-11 10:10:45 (6320): Setting Network Configuration for NAT.
2025-04-11 10:10:45 (6320): Enabling VM Network Access.
2025-04-11 10:10:46 (6320): Disabling USB Support for VM.
2025-04-11 10:10:46 (6320): Disabling COM Port Support for VM.
2025-04-11 10:10:46 (6320): Disabling LPT Port Support for VM.
2025-04-11 10:10:46 (6320): Disabling Audio Support for VM.
2025-04-11 10:10:47 (6320): Disabling Clipboard Support for VM.
2025-04-11 10:10:47 (6320): Disabling Drag and Drop Support for VM.
2025-04-11 10:10:47 (6320): Adding storage controller(s) to VM.
2025-04-11 10:10:47 (6320): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-11 10:10:48 (6320): Adding VirtualBox Guest Additions to VM.
2025-04-11 10:10:48 (6320): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-11 10:10:48 (6320): forwarding host port 59158 to guest port 80
2025-04-11 10:10:49 (6320): Enabling remote desktop for VM.
2025-04-11 10:10:49 (6320): Required extension pack not installed, remote desktop not enabled.
2025-04-11 10:10:49 (6320): Enabling shared directory for VM.
2025-04-11 10:10:49 (6320): Starting VM using VBoxManage interface. (boinc_6d2ef44883fcb6fe, slot#9)
2025-04-11 10:10:56 (6320): Successfully started VM. (PID = '4188')
2025-04-11 10:10:56 (6320): Reporting VM Process ID to BOINC.
2025-04-11 10:10:56 (6320): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-11 10:10:56 (6320): Guest Log: CPUID EDX: 0x178bfbff
2025-04-11 10:10:56 (6320): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-11 10:10:56 (6320): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-11 10:10:56 (6320): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-11 10:10:56 (6320): Detected: Web Application Enabled (http://localhost:59158)
2025-04-11 10:10:56 (6320): Preference change detected
2025-04-11 10:10:56 (6320): Setting CPU throttle for VM. (40%)
2025-04-11 10:10:56 (6320): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-11 10:10:58 (6320): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-11 10:10:58 (6320): Guest Log: BIOS: Booting from Hard Disk...
2025-04-11 10:11:02 (6320): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-11 10:11:02 (6320): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-11 10:11:02 (6320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-11 10:11:12 (6320): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-11 10:11:12 (6320): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-11 10:11:25 (6320): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-11 10:11:25 (6320): Guest Log: 00:00:00.000182 main     Log opened 2025-04-11T10:11:23.347641000Z
2025-04-11 10:11:25 (6320): Guest Log: 00:00:00.000311 main     OS Product: Linux
2025-04-11 10:11:25 (6320): Guest Log: 00:00:00.000362 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-11 10:11:25 (6320): Guest Log: 00:00:00.000475 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-11 10:11:25 (6320): Guest Log: 00:00:00.000520 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-11 10:11:25 (6320): Guest Log: 00:00:00.000521 main     Process ID: 1366
2025-04-11 10:11:25 (6320): Guest Log: 00:00:00.000522 main     Package type: LINUX_64BITS_GENERIC
2025-04-11 10:11:25 (6320): Guest Log: 00:00:00.001767 main     5.2.32 r132073 started. Verbose level = 0
2025-04-11 10:11:25 (6320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-11 10:11:25 (6320): Guest Log: [INFO] Mounting shared directory
2025-04-11 10:11:25 (6320): Guest Log: [INFO] Checking for init_data.xml
2025-04-11 10:11:32 (6320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-11 10:11:32 (6320): Guest Log: [INFO] Detected branch: prod
2025-04-11 10:11:32 (6320): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-11 10:11:32 (6320): Guest Log: Copying input files
2025-04-11 10:11:35 (6320): Guest Log: Copied input files into RunAtlas.
2025-04-11 10:11:35 (6320): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-11 10:11:35 (6320): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-11 10:11:35 (6320): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-11 10:11:35 (6320): Guest Log: Further information can be found at the LHC@home message board.
2025-04-11 10:11:35 (6320): Guest Log: 00:00:10.023894 timesync vgsvcTimeSyncWorker: Radical guest time change: -35 988 470 119 000ns (GuestNow=1 744 330 294 882 105 000 ns GuestLast=1 744 366 283 352 224 000 ns fSetTimeLastLoop=true )
2025-04-11 10:11:44 (6320): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-11 10:11:45 (6320): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-11 10:11:45 (6320): Guest Log: 2.6.3.0 1645 0 30164 144743 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-11 10:11:45 (6320): Guest Log: copied the webapp to /var/www
2025-04-11 10:11:45 (6320): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-11 10:11:45 (6320): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-11 10:11:46 (6320): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-11 10:11:46 (6320): Guest Log:  *** Starting ATLAS job. (PandaID=6595825089 taskID=44075164) ***
2025-04-11 11:51:00 (6320): Status Report: Elapsed Time: '6000.000000'
2025-04-11 11:51:00 (6320): Status Report: CPU Time: '15498.765625'
2025-04-11 12:11:11 (6320): VM state change detected. (old = 'running', new = 'paused')
2025-04-12 07:14:41 (6320): VM state change detected. (old = 'paused', new = 'running')
2025-04-12 07:14:43 (6320): Guest Log: 01:59:47.201882 timesync vgsvcTimeSyncWorker: Radical host time change: 68 623 058 000 000ns (HostNow=1 744 406 044 103 000 000 ns HostLast=1 744 337 421 045 000 000 ns)
2025-04-12 07:14:54 (6320): Guest Log: 01:59:57.270580 timesync vgsvcTimeSyncWorker: Radical guest time change: 68 582 120 225 000ns (GuestNow=1 744 406 054 175 845 000 ns GuestLast=1 744 337 472 055 620 000 ns fSetTimeLastLoop=true )
2025-04-12 08:34:37 (6320): Status Report: Elapsed Time: '12000.000000'
2025-04-12 08:34:37 (6320): Status Report: CPU Time: '37110.984375'
2025-04-12 09:15:08 (6320): VM state change detected. (old = 'running', new = 'paused')
2025-04-12 15:44:39 (6320): VM state change detected. (old = 'paused', new = 'running')
2025-04-12 15:44:45 (6320): Guest Log: 04:00:18.922929 timesync vgsvcTimeSyncWorker: Radical host time change: 23 385 933 000 000ns (HostNow=1 744 436 678 197 000 000 ns HostLast=1 744 413 292 264 000 000 ns)
2025-04-12 15:44:55 (6320): Guest Log: 04:00:29.003013 timesync vgsvcTimeSyncWorker: Radical guest time change: 23 412 449 626 000ns (GuestNow=1 744 436 688 277 451 000 ns GuestLast=1 744 413 275 827 825 000 ns fSetTimeLastLoop=true )
2025-04-12 16:44:14 (6320): Status Report: Elapsed Time: '18000.000000'
2025-04-12 16:44:14 (6320): Status Report: CPU Time: '58649.906250'
2025-04-12 17:32:34 (6320): Guest Log:  *** Job finished ***
2025-04-12 17:32:34 (6320): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:15,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:16,716 | INFO     | [job] queue monitor thread has finished
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:16,838 | INFO     | [data] queue_monitor thread has finished
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:17,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790412568384)>', '<ExcThread(monitor, started 139789810513664)>']
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:17,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:17,997 | INFO     | [monitor] control thread has ended
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:22,595 | INFO     | all workflow threads have been joined
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:22,596 | INFO     | end of generic workflow (traces error code: 0)
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:22,596 | INFO     | traces error code: 0
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:22,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:22,822 [wrapper] ==== pilot stdout END ====
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:22,827 [wrapper] ==== wrapper stdout RESUME ====
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:22,831 [wrapper] pilotpid: 6012
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:22,836 [wrapper] Pilot exit status: 0
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:23,712 [wrapper] pandaids: 6595825089
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:23,741 [wrapper] cleanup supervisor_pilot 17497 6013
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:23,745 [wrapper] Test setup, not cleaning
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:23,749 [wrapper] apfmon messages muted
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:23,753 [wrapper] ==== wrapper stdout END ====
2025-04-12 17:32:34 (6320): Guest Log: 2025-04-12 07:32:23,758 [wrapper] ==== wrapper stderr END ====
2025-04-12 17:32:34 (6320): Guest Log:  *** Error codes and diagnostics ***
2025-04-12 17:32:34 (6320): Guest Log:     "exeErrorCode": 0,
2025-04-12 17:32:34 (6320): Guest Log:     "exeErrorDiag": "",
2025-04-12 17:32:34 (6320): Guest Log:     "pilotErrorCode": 0,
2025-04-12 17:32:34 (6320): Guest Log:     "pilotErrorDiag": "",
2025-04-12 17:32:34 (6320): Guest Log:  *** Listing of results directory ***
2025-04-12 17:32:34 (6320): Guest Log: total 199616
2025-04-12 17:32:34 (6320): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 10 10:00 pilot3.tar.gz
2025-04-12 17:32:34 (6320): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 10 10:34 runpilot2-wrapper.sh
2025-04-12 17:32:34 (6320): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 10 10:34 queuedata.json
2025-04-12 17:32:34 (6320): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 11 00:11 start_atlas.sh
2025-04-12 17:32:34 (6320): Guest Log: -rwxr-xr-x. 1 atlas atlas    508882 Apr 11 00:11 input.tar.gz
2025-04-12 17:32:34 (6320): Guest Log: -rwxr-xr-x. 1 atlas atlas     10443 Apr 11 00:11 init_data.xml
2025-04-12 17:32:34 (6320): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 11 00:11 EVNT.44075162._000999.pool.root.1 -> /data/./ATLAS.root_0
2025-04-12 17:32:34 (6320): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr 11 00:11 pandaJob.out
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas       424 Apr 11 00:11 setup.sh.local
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas    987284 Apr 11 00:12 agis_schedconf.cvmfs.json
2025-04-12 17:32:34 (6320): Guest Log: drwx------. 4 atlas atlas      4096 Apr 11 00:13 pilot3
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas 197222972 Apr 12 07:29 HITS.44075164._025143.pool.root.1
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas      1032 Apr 12 07:30 memory_monitor_summary.json
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 12 07:31 agis_ddmendpoints.agis.ALL.json
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas    411159 Apr 12 07:31 log.44075164._025143.job.log.tgz.1
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas        98 Apr 12 07:31 pilot_heartbeat.json
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas      7732 Apr 12 07:32 heartbeat.json
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 12 07:32 pilotlog.txt
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas   1287426 Apr 12 07:32 log.44075164._025143.job.log.1
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas       357 Apr 12 07:32 output.list
2025-04-12 17:32:34 (6320): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 12 07:32 runtime_log
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas   1720320 Apr 12 07:32 result.tar.gz
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas       662 Apr 12 07:32 U2UKDmBQ4M7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmyhwKDmaPB5Zn.diag
2025-04-12 17:32:34 (6320): Guest Log: -rw-r--r--. 1 atlas atlas     10943 Apr 12 07:32 runtime_log.err
2025-04-12 17:32:34 (6320): Guest Log: Looking for outputfile HITS.44075164._025143.pool.root.1
2025-04-12 17:32:34 (6320): Guest Log: HITS file was successfully produced
2025-04-12 17:32:34 (6320): Guest Log: -rw-------. 1 atlas atlas 197222972 Apr 12 07:29 /home/atlas/RunAtlas/HITS.44075164._025143.pool.root.1
2025-04-12 17:32:36 (6320): Guest Log: Successfully finished the ATLAS job!
2025-04-12 17:32:36 (6320): Guest Log: Copying the results back to the shared directory!
2025-04-12 17:32:36 (6320): Guest Log:  *** Contents of shared directory: ***
2025-04-12 17:32:36 (6320): Guest Log: total 410604
2025-04-12 17:32:36 (6320): Guest Log: -rwxrwxrwx. 1 root root 220965688 Apr 11 00:10 ATLAS.root_0
2025-04-12 17:32:36 (6320): Guest Log: -rwxrwxrwx. 1 root root 197222972 Apr 12  2025 HITS.pool.root.1
2025-04-12 17:32:36 (6320): Guest Log: -rwxrwxrwx. 1 root root     10443 Apr 11 00:10 init_data.xml
2025-04-12 17:32:36 (6320): Guest Log: -rwxrwxrwx. 1 root root    508882 Apr 10 18:50 input.tar.gz
2025-04-12 17:32:36 (6320): Guest Log: -rwxrwxrwx. 1 root root   1720320 Apr 12  2025 result.tar.gz
2025-04-12 17:32:36 (6320): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 10 18:50 start_atlas.sh
2025-04-12 17:32:36 (6320): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-12 17:32:36 (6320): VM Completion File Detected.
2025-04-12 17:32:36 (6320): Powering off VM.
2025-04-12 17:32:37 (6320): Successfully stopped VM.
2025-04-12 17:32:37 (6320): Deregistering VM. (boinc_6d2ef44883fcb6fe, slot#9)
2025-04-12 17:32:37 (6320): Removing network bandwidth throttle group from VM.
2025-04-12 17:32:37 (6320): Removing VM from VirtualBox.
17:32:43 (6320): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN