Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:43:23 (518553): wrapper (7.7.26015): starting
06:43:23 (518553): wrapper: running run_atlas (--nthreads 3)
[2025-04-11 06:43:23] Arguments: --nthreads 3
[2025-04-11 06:43:23] Threads: 3
[2025-04-11 06:43:23] Checking for CVMFS
[2025-04-11 06:43:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 06:43:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 06:43:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 06:43:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 06:43:23] 2.9.2.0 3754352 3475 79460 144751 0 56 22024462 36864000 0 130560 0 2579180 99.991 788098 4137 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-11 06:43:23] CVMFS is ok
[2025-04-11 06:43:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-11 06:43:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-11 06:43:23] Further information can be found at the LHC@home message board.
[2025-04-11 06:43:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 06:43:23] Checking for apptainer binary...
[2025-04-11 06:43:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 06:43:23] Running /usr/bin/apptainer --version
[2025-04-11 06:43:23] apptainer version 1.3.6-4.2
[2025-04-11 06:43:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 06:43:23] atlasA217a
[2025-04-11 06:43:23] apptainer works
[2025-04-11 06:43:23] Set ATHENA_PROC_NUMBER=3
[2025-04-11 06:43:23] Set ATHENA_CORE_NUMBER=3
[2025-04-11 06:43:23] Starting ATLAS job with PandaID=6596005647
[2025-04-11 06:43:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 08:11:48]  *** The last 200 lines of the pilot log: ***
[2025-04-11 08:11:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-11 08:11:48]  is_altstaged=None
[2025-04-11 08:11:48]  is_tar=False
[2025-04-11 08:11:48]  lfn=log.44075164._027688.job.log.tgz.1
[2025-04-11 08:11:48]  mtime=0
[2025-04-11 08:11:48]  protocol_id=None
[2025-04-11 08:11:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-11 08:11:48]  replicas=None
[2025-04-11 08:11:48]  scope=mc23_13p6TeV
[2025-04-11 08:11:48]  status=None
[2025-04-11 08:11:48]  status_code=0
[2025-04-11 08:11:48]  storage_token=
[2025-04-11 08:11:48]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6596005647/log.44075164._027688.job.log.tgz.1
[2025-04-11 08:11:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/63/log.44075164._027688.job.log.tgz.1
[2025-04-11 08:11:48]  workdir=None
[2025-04-11 08:11:48] ]
[2025-04-11 08:11:48] 2025-04-11 06:11:21,016 | INFO     | transferring file log.44075164._027688.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6596005647/log.44075164._027688.job.log.tgz.1 to /local/data/boinc/
[2025-04-11 08:11:48] 2025-04-11 06:11:21,016 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6596005647/log.44075164._027688.job.log.tgz.1 /local/data/boinc/slots/0/log.44075164._0276
[2025-04-11 08:11:48] 2025-04-11 06:11:21,029 | INFO     | adding to output.list: log.44075164._027688.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/63/log.44075164._027688.job.log.tg
[2025-04-11 08:11:48] 2025-04-11 06:11:21,029 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-11 08:11:48] 2025-04-11 06:11:21,029 | INFO     | summary of transferred files:
[2025-04-11 08:11:48] 2025-04-11 06:11:21,029 | INFO     |  -- lfn=log.44075164._027688.job.log.tgz.1, status_code=0, status=transferred
[2025-04-11 08:11:48] 2025-04-11 06:11:21,029 | INFO     | stage-out finished correctly
[2025-04-11 08:11:48] 2025-04-11 06:11:22,700 | INFO     | monitor loop #406: job 0:6596005647 is in state 'finished'
[2025-04-11 08:11:48] 2025-04-11 06:11:22,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 08:11:48] 2025-04-11 06:11:23,878 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-11 08:11:48] 2025-04-11 06:11:25,204 | INFO     | monitor loop #407: job 0:6596005647 is in state 'finished'
[2025-04-11 08:11:48] 2025-04-11 06:11:25,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 08:11:48] 2025-04-11 06:11:25,920 | INFO     | job 6596005647 has state=finished
[2025-04-11 08:11:48] 2025-04-11 06:11:25,921 | INFO     | preparing for final server update for job 6596005647 in state='finished'
[2025-04-11 08:11:48] 2025-04-11 06:11:25,921 | INFO     | this job has now completed (state=finished)
[2025-04-11 08:11:48] 2025-04-11 06:11:25,921 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-11 08:11:48] 2025-04-11 06:11:25,921 | INFO     | log transfer has been attempted: DONE
[2025-04-11 08:11:48] 2025-04-11 06:11:25,921 | INFO     | job 6596005647 has finished - writing final server update
[2025-04-11 08:11:48] 2025-04-11 06:11:25,922 | INFO     | total number of processed events: 400 (read)
[2025-04-11 08:11:48] 2025-04-11 06:11:25,923 | INFO     | executing command: lscpu
[2025-04-11 08:11:48] 2025-04-11 06:11:25,940 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-11 08:11:48] 2025-04-11 06:11:27,707 | INFO     | monitor loop #408: job 0:6596005647 is in state 'finished'
[2025-04-11 08:11:48] 2025-04-11 06:11:27,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 08:11:48] 2025-04-11 06:11:29,774 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-11 08:11:48] 2025-04-11 06:11:29,775 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6596005647/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 08:11:48] 2025-04-11 06:11:29,775 | INFO     | extracted standard info from prmon json
[2025-04-11 08:11:48] 2025-04-11 06:11:29,775 | INFO     | extracted standard memory fields from prmon json
[2025-04-11 08:11:48] 2025-04-11 06:11:29,775 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-11 08:11:48] 2025-04-11 06:11:29,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-11 08:11:48] 2025-04-11 06:11:29,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-11 08:11:48] 2025-04-11 06:11:29,776 | INFO     | fitting pss+swap vs Time
[2025-04-11 08:11:48] 2025-04-11 06:11:29,776 | INFO     | sum of square deviations: 158737860.0
[2025-04-11 08:11:48] 2025-04-11 06:11:29,776 | INFO     | sum of deviations: 2516362392.5
[2025-04-11 08:11:48] 2025-04-11 06:11:29,776 | INFO     | mean x: 1744349342.5
[2025-04-11 08:11:48] 2025-04-11 06:11:29,776 | INFO     | mean y: 2386980.9875
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | -- intersect: -27649586435.11564
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | intersect: -27649586435.11564
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | chi2: 1.5075993768672873
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | -- intersect: -27649586435.11564
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | current memory leak: 15.85 B/s (using 80 data points, chi2=1.51)
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | ..............................
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | . Timing measurements:
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | . get job = 0 s
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | . initial setup = 1 s
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | . payload setup = 2 s
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | . stage-in = 0 s
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | . payload execution = 5252 s
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | . stage-out = 0 s
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | . log creation = 0 s
[2025-04-11 08:11:48] 2025-04-11 06:11:29,777 | INFO     | ..............................
[2025-04-11 08:11:48] 2025-04-11 06:11:29,808 | INFO     | 
[2025-04-11 08:11:48] 2025-04-11 06:11:29,808 | INFO     | job summary report
[2025-04-11 08:11:48] 2025-04-11 06:11:29,808 | INFO     | --------------------------------------------------
[2025-04-11 08:11:48] 2025-04-11 06:11:29,808 | INFO     | PanDA job id: 6596005647
[2025-04-11 08:11:48] 2025-04-11 06:11:29,808 | INFO     | task id: 44075164
[2025-04-11 08:11:48] 2025-04-11 06:11:29,808 | INFO     | errors: (none)
[2025-04-11 08:11:48] 2025-04-11 06:11:29,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | pilot state: finished 
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | transexitcode: 0
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | exeerrorcode: 0
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | exeerrordiag: 
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | exitcode: 0
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | exitmsg: OK
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | cpuconsumptiontime: 13918 s
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | nevents: 400
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | neventsw: 0
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | pid: 528630
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | pgrp: 528630
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | corecount: 3
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | event service: False
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | sizes: {0: 2417279, 2: 2417485, 11: 2417513, 5259: 2452955, 5262: 2452955, 5268: 2453125}
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | --------------------------------------------------
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | 
[2025-04-11 08:11:48] 2025-04-11 06:11:29,809 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-11 08:11:48] 2025-04-11 06:11:29,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | job 6596005647 has completed (purged errors)
[2025-04-11 08:11:48] 2025-04-11 06:11:29,821 | INFO     | overall cleanup function is called
[2025-04-11 08:11:48] 2025-04-11 06:11:30,828 | INFO     | --- collectZombieJob: --- 10, [528630]
[2025-04-11 08:11:48] 2025-04-11 06:11:30,828 | INFO     | zombie collector waiting for pid 528630
[2025-04-11 08:11:48] 2025-04-11 06:11:30,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 08:11:48] 2025-04-11 06:11:30,828 | INFO     | collected zombie processes
[2025-04-11 08:11:48] 2025-04-11 06:11:30,828 | INFO     | will attempt to kill all subprocesses of pid=528630
[2025-04-11 08:11:48] 2025-04-11 06:11:30,871 | INFO     | process IDs to be killed: [528630] (in reverse order)
[2025-04-11 08:11:48] 2025-04-11 06:11:30,895 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 08:11:48] 2025-04-11 06:11:30,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 08:11:48] 2025-04-11 06:11:30,896 | INFO     | did not find any defunct processes belonging to 528630
[2025-04-11 08:11:48] 2025-04-11 06:11:30,897 | INFO     | did not find any defunct processes belonging to 528630
[2025-04-11 08:11:48] 2025-04-11 06:11:30,897 | INFO     | ready for new job
[2025-04-11 08:11:48] 2025-04-11 06:11:30,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 08:11:48] 2025-04-11 06:11:30,898 | INFO     | **************************************
[2025-04-11 08:11:48] 2025-04-11 06:11:30,898 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-11 08:11:48] 2025-04-11 06:11:30,898 | INFO     | **************************************
[2025-04-11 08:11:48] 2025-04-11 06:11:30,898 | INFO     | 
[2025-04-11 08:11:48] 2025-04-11 06:11:30,898 | INFO     | architecture information:
[2025-04-11 08:11:48] 2025-04-11 06:11:30,899 | INFO     | executing command: cat /etc/os-release
[2025-04-11 08:11:48] 2025-04-11 06:11:30,907 | INFO     | cat /etc/os-release:
[2025-04-11 08:11:48] NAME="CentOS Linux"
[2025-04-11 08:11:48] VERSION="7 (Core)"
[2025-04-11 08:11:48] ID="centos"
[2025-04-11 08:11:48] ID_LIKE="rhel fedora"
[2025-04-11 08:11:48] VERSION_ID="7"
[2025-04-11 08:11:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 08:11:48] ANSI_COLOR="0;31"
[2025-04-11 08:11:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 08:11:48] HOME_URL="https://www.centos.org/"
[2025-04-11 08:11:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 08:11:48] 
[2025-04-11 08:11:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 08:11:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 08:11:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 08:11:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 08:11:48] 
[2025-04-11 08:11:48] 2025-04-11 06:11:30,907 | INFO     | **************************************
[2025-04-11 08:11:48] 2025-04-11 06:11:31,411 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-11 08:11:48] 2025-04-11 06:11:31,424 | INFO     | sufficient remaining disk space (334472675328 B)
[2025-04-11 08:11:48] 2025-04-11 06:11:31,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 08:11:48] 2025-04-11 06:11:31,424 | INFO     | current server update state: UPDATING_FINAL
[2025-04-11 08:11:48] 2025-04-11 06:11:31,424 | INFO     | update_server=False
[2025-04-11 08:11:48] 2025-04-11 06:11:31,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 08:11:48] 2025-04-11 06:11:31,424 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-11 08:11:48] 2025-04-11 06:11:31,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 08:11:48] 2025-04-11 06:11:31,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 08:11:48] 2025-04-11 06:11:31,425 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 08:11:48] 2025-04-11 06:11:31,425 | INFO     | aborting loop
[2025-04-11 08:11:48] 2025-04-11 06:11:31,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 08:11:48] 2025-04-11 06:11:31,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 08:11:48] 2025-04-11 06:11:31,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 08:11:48] 2025-04-11 06:11:31,590 | INFO     | all job control threads have been joined
[2025-04-11 08:11:48] 2025-04-11 06:11:32,328 | INFO     | all data control threads have been joined
[2025-04-11 08:11:48] 2025-04-11 06:11:32,430 | INFO     | [job] retrieve thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:32,430 | INFO     | [job] queue monitor thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:32,430 | INFO     | [job] job monitor thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:32,457 | INFO     | all payload control threads have been joined
[2025-04-11 08:11:48] 2025-04-11 06:11:32,596 | INFO     | [job] control thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:32,619 | INFO     | [data] copytool_in thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:32,971 | INFO     | [payload] validate_post thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:33,122 | INFO     | [job] validate thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:33,231 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:33,239 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:33,334 | INFO     | [data] control thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:33,341 | INFO     | [payload] failed_post thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:33,463 | INFO     | [payload] control thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:33,579 | INFO     | [data] copytool_out thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:33,746 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:34,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 08:11:48] 2025-04-11 06:11:38,427 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:42,283 | INFO     | job.realtimelogging is not enabled
[2025-04-11 08:11:48] 2025-04-11 06:11:43,289 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 08:11:48] 2025-04-11 06:11:43,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154071283520)>', '<ExcThread(monitor, started 140153414731520)>']
[2025-04-11 08:11:48] 2025-04-11 06:11:44,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 08:11:48] 2025-04-11 06:11:44,495 | INFO     | [monitor] control thread has ended
[2025-04-11 08:11:48] 2025-04-11 06:11:48,523 | INFO     | all workflow threads have been joined
[2025-04-11 08:11:48] 2025-04-11 06:11:48,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 08:11:48] 2025-04-11 06:11:48,524 | INFO     | traces error code: 0
[2025-04-11 08:11:48] 2025-04-11 06:11:48,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 08:11:48] 2025-04-11 06:11:48,574 [wrapper] ==== pilot stdout END ====
[2025-04-11 08:11:48] 2025-04-11 06:11:48,576 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 08:11:48] 2025-04-11 06:11:48,578 [wrapper] pilotpid: 522201
[2025-04-11 08:11:48] 2025-04-11 06:11:48,581 [wrapper] Pilot exit status: 0
[2025-04-11 08:11:48] 2025-04-11 06:11:48,588 [wrapper] pandaids: 6596005647
[2025-04-11 08:11:48] 2025-04-11 06:11:48,604 [wrapper] cleanup supervisor_pilot  540499 522202
[2025-04-11 08:11:48] 2025-04-11 06:11:48,606 [wrapper] Test setup, not cleaning
[2025-04-11 08:11:48] 2025-04-11 06:11:48,609 [wrapper] apfmon messages muted
[2025-04-11 08:11:48] 2025-04-11 06:11:48,611 [wrapper] ==== wrapper stdout END ====
[2025-04-11 08:11:48] 2025-04-11 06:11:48,613 [wrapper] ==== wrapper stderr END ====
[2025-04-11 08:11:48]  *** Error codes and diagnostics ***
[2025-04-11 08:11:48]     "exeErrorCode": 0,
[2025-04-11 08:11:48]     "exeErrorDiag": "",
[2025-04-11 08:11:48]     "pilotErrorCode": 0,
[2025-04-11 08:11:48]     "pilotErrorDiag": "",
[2025-04-11 08:11:48]  *** Listing of results directory ***
[2025-04-11 08:11:48] total 408264
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc    495897 Apr 10 16:53 pilot3.tar.gz
[2025-04-11 08:11:48] -rwx------ 1 boinc boinc     37140 Apr 10 16:54 runpilot2-wrapper.sh
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc      5111 Apr 10 16:54 queuedata.json
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc       100 Apr 11 06:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 08:11:48] -rwxr-xr-x 1 boinc boinc      7986 Apr 11 06:43 run_atlas
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc       105 Apr 11 06:43 job.xml
[2025-04-11 08:11:48] -rw-r--r-- 2 boinc boinc 222767618 Apr 11 06:43 EVNT.44075162._001099.pool.root.1
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc      6925 Apr 11 06:43 init_data.xml
[2025-04-11 08:11:48] -rw-r--r-- 2 boinc boinc    508879 Apr 11 06:43 input.tar.gz
[2025-04-11 08:11:48] drwxrwx--x 2 boinc boinc      4096 Apr 11 06:43 shared
[2025-04-11 08:11:48] -rw-r--r-- 2 boinc boinc     17569 Apr 11 06:43 start_atlas.sh
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc         0 Apr 11 06:43 boinc_lockfile
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc      2549 Apr 11 06:43 pandaJob.out
[2025-04-11 08:11:48] -rw------- 1 boinc boinc       424 Apr 11 06:43 setup.sh.local
[2025-04-11 08:11:48] -rw------- 1 boinc boinc    986054 Apr 11 06:43 agis_schedconf.cvmfs.json
[2025-04-11 08:11:48] -rw------- 1 boinc boinc   1603528 Apr 11 06:43 agis_ddmendpoints.agis.ALL.json
[2025-04-11 08:11:48] drwx------ 4 boinc boinc      4096 Apr 11 06:43 pilot3
[2025-04-11 08:11:48] -rw------- 1 boinc boinc        95 Apr 11 08:10 pilot_heartbeat.json
[2025-04-11 08:11:48] -rw------- 1 boinc boinc 189948568 Apr 11 08:11 HITS.44075164._027688.pool.root.1
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc       529 Apr 11 08:11 boinc_task_state.xml
[2025-04-11 08:11:48] -rw------- 1 boinc boinc      1019 Apr 11 08:11 memory_monitor_summary.json
[2025-04-11 08:11:48] -rw------- 1 boinc boinc    241611 Apr 11 08:11 log.44075164._027688.job.log.tgz.1
[2025-04-11 08:11:48] -rw------- 1 boinc boinc      7672 Apr 11 08:11 heartbeat.json
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc      8192 Apr 11 08:11 boinc_mmap_file
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc        27 Apr 11 08:11 wrapper_checkpoint.txt
[2025-04-11 08:11:48] -rw------- 1 boinc boinc      4552 Apr 11 08:11 pilotlog.txt
[2025-04-11 08:11:48] -rw------- 1 boinc boinc    508590 Apr 11 08:11 log.44075164._027688.job.log.1
[2025-04-11 08:11:48] -rw------- 1 boinc boinc       357 Apr 11 08:11 output.list
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc       620 Apr 11 08:11 runtime_log
[2025-04-11 08:11:48] -rw------- 1 boinc boinc    768000 Apr 11 08:11 result.tar.gz
[2025-04-11 08:11:48] -rw------- 1 boinc boinc       662 Apr 11 08:11 uLhMDmPT8M7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVaOLDmYn9wKn.diag
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc     11119 Apr 11 08:11 runtime_log.err
[2025-04-11 08:11:48] -rw-r--r-- 1 boinc boinc     21312 Apr 11 08:11 stderr.txt
[2025-04-11 08:11:48] HITS file was successfully produced:
[2025-04-11 08:11:48] -rw------- 1 boinc boinc 189948568 Apr 11 08:11 shared/HITS.pool.root.1
[2025-04-11 08:11:48]  *** Contents of shared directory: ***
[2025-04-11 08:11:48] total 404328
[2025-04-11 08:11:48] -rw-r--r-- 2 boinc boinc 222767618 Apr 11 06:43 ATLAS.root_0
[2025-04-11 08:11:48] -rw-r--r-- 2 boinc boinc    508879 Apr 11 06:43 input.tar.gz
[2025-04-11 08:11:48] -rw-r--r-- 2 boinc boinc     17569 Apr 11 06:43 start_atlas.sh
[2025-04-11 08:11:48] -rw------- 1 boinc boinc 189948568 Apr 11 08:11 HITS.pool.root.1
[2025-04-11 08:11:48] -rw------- 1 boinc boinc    768000 Apr 11 08:11 result.tar.gz
08:11:50 (518553): run_atlas exited; CPU time 13938.407524
08:11:50 (518553): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN