Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
23:36:51 (4072895): wrapper (7.7.26015): starting
23:36:51 (4072895): wrapper: running run_atlas (--nthreads 4)
[2025-04-10 23:36:51] Arguments: --nthreads 4
[2025-04-10 23:36:51] Threads: 4
[2025-04-10 23:36:51] Checking for CVMFS
[2025-04-10 23:36:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-10 23:36:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-10 23:36:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-10 23:36:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-10 23:36:51] 2.12.7.0 1248243 2358 109992 144739 1 187 3263106 4096000 2766 130560 0 7944529 99.997 511447 5169 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-10 23:36:51] CVMFS is ok
[2025-04-10 23:36:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-10 23:36:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-10 23:36:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-10 23:36:51] Further information can be found at the LHC@home message board.
[2025-04-10 23:36:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-10 23:36:51] Checking for apptainer binary...
[2025-04-10 23:36:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-10 23:36:51] Running /usr/bin/apptainer --version
[2025-04-10 23:36:51] apptainer version 1.2.3
[2025-04-10 23:36:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-10 23:36:51] Ryzen-7-7700-Zen4-Deb12
[2025-04-10 23:36:51] apptainer works
[2025-04-10 23:36:51] Set ATHENA_PROC_NUMBER=4
[2025-04-10 23:36:51] Set ATHENA_CORE_NUMBER=4
[2025-04-10 23:36:51] Starting ATLAS job with PandaID=6596005504
[2025-04-10 23:36:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 00:54:03]  *** The last 200 lines of the pilot log: ***
[2025-04-11 00:54:03]  ddmendpoint_alt=None
[2025-04-11 00:54:03]  direct_access_lan=False
[2025-04-11 00:54:03]  direct_access_wan=False
[2025-04-11 00:54:03]  domain=
[2025-04-11 00:54:03]  filesize=228013
[2025-04-11 00:54:03]  filetype=log
[2025-04-11 00:54:03]  guid=42045a45-7d40-42f7-bf78-3fcab202f791
[2025-04-11 00:54:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-11 00:54:03]  is_altstaged=None
[2025-04-11 00:54:03]  is_tar=False
[2025-04-11 00:54:03]  lfn=log.44075164._027545.job.log.tgz.1
[2025-04-11 00:54:03]  mtime=0
[2025-04-11 00:54:03]  protocol_id=None
[2025-04-11 00:54:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-11 00:54:03]  replicas=None
[2025-04-11 00:54:03]  scope=mc23_13p6TeV
[2025-04-11 00:54:03]  status=None
[2025-04-11 00:54:03]  status_code=0
[2025-04-11 00:54:03]  storage_token=
[2025-04-11 00:54:03]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6596005504/log.44075164._027545.job.log.tgz.1
[2025-04-11 00:54:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/c1/log.44075164._027545.job.log.tgz.1
[2025-04-11 00:54:03]  workdir=None
[2025-04-11 00:54:03] ]
[2025-04-11 00:54:03] 2025-04-10 22:53:47,965 | INFO     | transferring file log.44075164._027545.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6596005504/log.44075164._027545.job.log.tgz.1 to /var/lib/boinc
[2025-04-11 00:54:03] 2025-04-10 22:53:47,965 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6596005504/log.44075164._027545.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.440751
[2025-04-11 00:54:03] 2025-04-10 22:53:47,994 | INFO     | adding to output.list: log.44075164._027545.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/c1/log.44075164._027545.job.log.tg
[2025-04-11 00:54:03] 2025-04-10 22:53:47,994 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-11 00:54:03] 2025-04-10 22:53:47,994 | INFO     | summary of transferred files:
[2025-04-11 00:54:03] 2025-04-10 22:53:47,994 | INFO     |  -- lfn=log.44075164._027545.job.log.tgz.1, status_code=0, status=transferred
[2025-04-11 00:54:03] 2025-04-10 22:53:47,994 | INFO     | stage-out finished correctly
[2025-04-11 00:54:03] 2025-04-10 22:53:48,036 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-11 00:54:03] 2025-04-10 22:53:48,076 | INFO     | job 6596005504 has state=finished
[2025-04-11 00:54:03] 2025-04-10 22:53:48,076 | INFO     | preparing for final server update for job 6596005504 in state='finished'
[2025-04-11 00:54:03] 2025-04-10 22:53:48,076 | INFO     | this job has now completed (state=finished)
[2025-04-11 00:54:03] 2025-04-10 22:53:48,076 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-11 00:54:03] 2025-04-10 22:53:48,076 | INFO     | log transfer has been attempted: DONE
[2025-04-11 00:54:03] 2025-04-10 22:53:48,076 | INFO     | job 6596005504 has finished - writing final server update
[2025-04-11 00:54:03] 2025-04-10 22:53:48,076 | INFO     | total number of processed events: 400 (read)
[2025-04-11 00:54:03] 2025-04-10 22:53:48,077 | INFO     | executing command: lscpu
[2025-04-11 00:54:03] 2025-04-10 22:53:48,091 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-11 00:54:03] 2025-04-10 22:53:49,787 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-11 00:54:03] 2025-04-10 22:53:49,788 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6596005504/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 00:54:03] 2025-04-10 22:53:49,788 | INFO     | extracted standard info from prmon json
[2025-04-11 00:54:03] 2025-04-10 22:53:49,788 | INFO     | extracted standard memory fields from prmon json
[2025-04-11 00:54:03] 2025-04-10 22:53:49,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-11 00:54:03] 2025-04-10 22:53:49,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-11 00:54:03] 2025-04-10 22:53:49,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-11 00:54:03] 2025-04-10 22:53:49,789 | INFO     | fitting pss+swap vs Time
[2025-04-11 00:54:03] 2025-04-10 22:53:49,789 | INFO     | sum of square deviations: 101843770.0
[2025-04-11 00:54:03] 2025-04-10 22:53:49,789 | INFO     | sum of deviations: 7966072106.000003
[2025-04-11 00:54:03] 2025-04-10 22:53:49,789 | INFO     | mean x: 1744323412.0
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | mean y: 2299199.6666666665
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | -- intersect: -136436150360.63486
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | intersect: -136436150360.63486
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | chi2: 1.3368532690028672
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | -- intersect: -136436150360.63486
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | current memory leak: 78.22 B/s (using 69 data points, chi2=1.34)
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | ..............................
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | . Timing measurements:
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | . get job = 0 s
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | . initial setup = 1 s
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | . payload setup = 2 s
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | . stage-in = 0 s
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | . payload execution = 4593 s
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | . stage-out = 0 s
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | . log creation = 0 s
[2025-04-11 00:54:03] 2025-04-10 22:53:49,790 | INFO     | ..............................
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | 
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | job summary report
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | --------------------------------------------------
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | PanDA job id: 6596005504
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | task id: 44075164
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | errors: (none)
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | pilot state: finished 
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | transexitcode: 0
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | exeerrorcode: 0
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | exeerrordiag: 
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | exitcode: 0
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | exitmsg: OK
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | cpuconsumptiontime: 15555 s
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | nevents: 400
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | neventsw: 0
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | pid: 4083111
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | pgrp: 4083111
[2025-04-11 00:54:03] 2025-04-10 22:53:49,862 | INFO     | corecount: 4
[2025-04-11 00:54:03] 2025-04-10 22:53:49,863 | INFO     | event service: False
[2025-04-11 00:54:03] 2025-04-10 22:53:49,863 | INFO     | sizes: {0: 2417332, 2: 2417538, 11: 2417566, 4599: 2452665, 4601: 2452779}
[2025-04-11 00:54:03] 2025-04-10 22:53:49,863 | INFO     | --------------------------------------------------
[2025-04-11 00:54:03] 2025-04-10 22:53:49,863 | INFO     | 
[2025-04-11 00:54:03] 2025-04-10 22:53:49,863 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | job 6596005504 has completed (purged errors)
[2025-04-11 00:54:03] 2025-04-10 22:53:49,874 | INFO     | overall cleanup function is called
[2025-04-11 00:54:03] 2025-04-10 22:53:50,881 | INFO     | --- collectZombieJob: --- 10, [4083111]
[2025-04-11 00:54:03] 2025-04-10 22:53:50,881 | INFO     | zombie collector waiting for pid 4083111
[2025-04-11 00:54:03] 2025-04-10 22:53:50,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 00:54:03] 2025-04-10 22:53:50,881 | INFO     | collected zombie processes
[2025-04-11 00:54:03] 2025-04-10 22:53:50,881 | INFO     | will attempt to kill all subprocesses of pid=4083111
[2025-04-11 00:54:03] 2025-04-10 22:53:50,924 | INFO     | process IDs to be killed: [4083111] (in reverse order)
[2025-04-11 00:54:03] 2025-04-10 22:53:50,950 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 00:54:03] 2025-04-10 22:53:50,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 00:54:03] 2025-04-10 22:53:50,952 | INFO     | did not find any defunct processes belonging to 4083111
[2025-04-11 00:54:03] 2025-04-10 22:53:50,953 | INFO     | did not find any defunct processes belonging to 4083111
[2025-04-11 00:54:03] 2025-04-10 22:53:50,953 | INFO     | ready for new job
[2025-04-11 00:54:03] 2025-04-10 22:53:50,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 00:54:03] 2025-04-10 22:53:50,954 | INFO     | **************************************
[2025-04-11 00:54:03] 2025-04-10 22:53:50,954 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-11 00:54:03] 2025-04-10 22:53:50,954 | INFO     | **************************************
[2025-04-11 00:54:03] 2025-04-10 22:53:50,954 | INFO     | 
[2025-04-11 00:54:03] 2025-04-10 22:53:50,954 | INFO     | architecture information:
[2025-04-11 00:54:03] 2025-04-10 22:53:50,955 | INFO     | executing command: cat /etc/os-release
[2025-04-11 00:54:03] 2025-04-10 22:53:50,963 | INFO     | cat /etc/os-release:
[2025-04-11 00:54:03] NAME="CentOS Linux"
[2025-04-11 00:54:03] VERSION="7 (Core)"
[2025-04-11 00:54:03] ID="centos"
[2025-04-11 00:54:03] ID_LIKE="rhel fedora"
[2025-04-11 00:54:03] VERSION_ID="7"
[2025-04-11 00:54:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 00:54:03] ANSI_COLOR="0;31"
[2025-04-11 00:54:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 00:54:03] HOME_URL="https://www.centos.org/"
[2025-04-11 00:54:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 00:54:03] 
[2025-04-11 00:54:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 00:54:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 00:54:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 00:54:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 00:54:03] 
[2025-04-11 00:54:03] 2025-04-10 22:53:50,963 | INFO     | **************************************
[2025-04-11 00:54:03] 2025-04-10 22:53:51,465 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | INFO     | sufficient remaining disk space (877088735232 B)
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | INFO     | current server update state: UPDATING_FINAL
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | INFO     | update_server=False
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 00:54:03] 2025-04-10 22:53:51,474 | INFO     | aborting loop
[2025-04-11 00:54:03] 2025-04-10 22:53:51,984 | INFO     | all data control threads have been joined
[2025-04-11 00:54:03] 2025-04-10 22:53:52,181 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 00:54:03] 2025-04-10 22:53:52,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 00:54:03] 2025-04-10 22:53:52,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 00:54:03] 2025-04-10 22:53:52,406 | INFO     | all payload control threads have been joined
[2025-04-11 00:54:03] 2025-04-10 22:53:52,477 | INFO     | [job] retrieve thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:52,477 | INFO     | [job] job monitor thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:52,479 | INFO     | [job] queue monitor thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:52,517 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:52,525 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:52,849 | INFO     | [data] copytool_in thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:52,942 | INFO     | [payload] failed_post thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:52,989 | INFO     | [data] control thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:53,105 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:53,123 | INFO     | all job control threads have been joined
[2025-04-11 00:54:03] 2025-04-10 22:53:53,409 | INFO     | [payload] control thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:53,449 | INFO     | [payload] validate_post thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:53,477 | INFO     | [data] copytool_out thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:53,545 | INFO     | job.realtimelogging is not enabled
[2025-04-11 00:54:03] 2025-04-10 22:53:53,957 | INFO     | [job] validate thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:54,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 00:54:03] 2025-04-10 22:53:54,128 | INFO     | [job] control thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:54,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:58,085 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 00:54:03] 2025-04-10 22:53:58,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348161804096)>', '<ExcThread(monitor, started 140347359348480)>']
[2025-04-11 00:54:03] 2025-04-10 22:53:58,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 00:54:03] 2025-04-10 22:53:58,205 | INFO     | [monitor] control thread has ended
[2025-04-11 00:54:03] 2025-04-10 22:54:03,149 | INFO     | all workflow threads have been joined
[2025-04-11 00:54:03] 2025-04-10 22:54:03,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 00:54:03] 2025-04-10 22:54:03,149 | INFO     | traces error code: 0
[2025-04-11 00:54:03] 2025-04-10 22:54:03,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 00:54:03] 2025-04-10 22:54:03,200 [wrapper] ==== pilot stdout END ====
[2025-04-11 00:54:03] 2025-04-10 22:54:03,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 00:54:03] 2025-04-10 22:54:03,202 [wrapper] pilotpid: 4076581
[2025-04-11 00:54:03] 2025-04-10 22:54:03,203 [wrapper] Pilot exit status: 0
[2025-04-11 00:54:03] 2025-04-10 22:54:03,208 [wrapper] pandaids: 6596005504
[2025-04-11 00:54:03] 2025-04-10 22:54:03,221 [wrapper] cleanup supervisor_pilot 4165570 4076582
[2025-04-11 00:54:03] 2025-04-10 22:54:03,222 [wrapper] Test setup, not cleaning
[2025-04-11 00:54:03] 2025-04-10 22:54:03,224 [wrapper] apfmon messages muted
[2025-04-11 00:54:03] 2025-04-10 22:54:03,225 [wrapper] ==== wrapper stdout END ====
[2025-04-11 00:54:03] 2025-04-10 22:54:03,226 [wrapper] ==== wrapper stderr END ====
[2025-04-11 00:54:03]  *** Error codes and diagnostics ***
[2025-04-11 00:54:03]     "exeErrorCode": 0,
[2025-04-11 00:54:03]     "exeErrorDiag": "",
[2025-04-11 00:54:03]     "pilotErrorCode": 0,
[2025-04-11 00:54:03]     "pilotErrorDiag": "",
[2025-04-11 00:54:03]  *** Listing of results directory ***
[2025-04-11 00:54:03] total 418116
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc    495897 Apr 10 16:38 pilot3.tar.gz
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc      5111 Apr 10 16:41 queuedata.json
[2025-04-11 00:54:03] -rwx------ 1 boinc boinc     37140 Apr 10 16:43 runpilot2-wrapper.sh
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc       100 Apr 10 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 00:54:03] -rwxr-xr-x 1 boinc boinc      7986 Apr 10 23:36 run_atlas
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc       105 Apr 10 23:36 job.xml
[2025-04-11 00:54:03] -rw-r--r-- 2 boinc boinc     17569 Apr 10 23:36 start_atlas.sh
[2025-04-11 00:54:03] drwxrwx--x 2 boinc boinc      4096 Apr 10 23:36 shared
[2025-04-11 00:54:03] -rw-r--r-- 2 boinc boinc    508887 Apr 10 23:36 input.tar.gz
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc      9243 Apr 10 23:36 init_data.xml
[2025-04-11 00:54:03] -rw-r--r-- 2 boinc boinc 224104974 Apr 10 23:36 EVNT.44075162._001094.pool.root.1
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc         0 Apr 10 23:36 boinc_lockfile
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc      2549 Apr 10 23:36 pandaJob.out
[2025-04-11 00:54:03] -rw------- 1 boinc boinc       424 Apr 10 23:36 setup.sh.local
[2025-04-11 00:54:03] -rw------- 1 boinc boinc    986213 Apr 10 23:36 agis_schedconf.cvmfs.json
[2025-04-11 00:54:03] -rw------- 1 boinc boinc   1603528 Apr 10 23:36 agis_ddmendpoints.agis.ALL.json
[2025-04-11 00:54:03] drwx------ 4 boinc boinc      4096 Apr 10 23:36 pilot3
[2025-04-11 00:54:03] -rw------- 1 boinc boinc 198799547 Apr 11 00:53 HITS.44075164._027545.pool.root.1
[2025-04-11 00:54:03] -rw------- 1 boinc boinc        95 Apr 11 00:53 pilot_heartbeat.json
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc       529 Apr 11 00:53 boinc_task_state.xml
[2025-04-11 00:54:03] -rw------- 1 boinc boinc      1018 Apr 11 00:53 memory_monitor_summary.json
[2025-04-11 00:54:03] -rw------- 1 boinc boinc    228013 Apr 11 00:53 log.44075164._027545.job.log.tgz.1
[2025-04-11 00:54:03] -rw------- 1 boinc boinc      7670 Apr 11 00:53 heartbeat.json
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc        27 Apr 11 00:54 wrapper_checkpoint.txt
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc      8192 Apr 11 00:54 boinc_mmap_file
[2025-04-11 00:54:03] -rw------- 1 boinc boinc      4433 Apr 11 00:54 pilotlog.txt
[2025-04-11 00:54:03] -rw------- 1 boinc boinc    467511 Apr 11 00:54 log.44075164._027545.job.log.1
[2025-04-11 00:54:03] -rw------- 1 boinc boinc       357 Apr 11 00:54 output.list
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc       620 Apr 11 00:54 runtime_log
[2025-04-11 00:54:03] -rw------- 1 boinc boinc    716800 Apr 11 00:54 result.tar.gz
[2025-04-11 00:54:03] -rw------- 1 boinc boinc       654 Apr 11 00:54 uTJNDmVI8M7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1YOLDmyUFU6n.diag
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc     11161 Apr 11 00:54 runtime_log.err
[2025-04-11 00:54:03] -rw-r--r-- 1 boinc boinc     20825 Apr 11 00:54 stderr.txt
[2025-04-11 00:54:03] HITS file was successfully produced:
[2025-04-11 00:54:03] -rw------- 1 boinc boinc 198799547 Apr 11 00:53 shared/HITS.pool.root.1
[2025-04-11 00:54:03]  *** Contents of shared directory: ***
[2025-04-11 00:54:03] total 414228
[2025-04-11 00:54:03] -rw-r--r-- 2 boinc boinc     17569 Apr 10 23:36 start_atlas.sh
[2025-04-11 00:54:03] -rw-r--r-- 2 boinc boinc    508887 Apr 10 23:36 input.tar.gz
[2025-04-11 00:54:03] -rw-r--r-- 2 boinc boinc 224104974 Apr 10 23:36 ATLAS.root_0
[2025-04-11 00:54:03] -rw------- 1 boinc boinc 198799547 Apr 11 00:53 HITS.pool.root.1
[2025-04-11 00:54:03] -rw------- 1 boinc boinc    716800 Apr 11 00:54 result.tar.gz
00:54:04 (4072895): run_atlas exited; CPU time 15577.181927
00:54:04 (4072895): called boinc_finish(0)

</stderr_txt>
]]>

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