Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:04:17 (1340460): wrapper (7.7.26015): starting
01:04:17 (1340460): wrapper: running run_atlas (--nthreads 6)
[2025-04-11 01:04:17] Arguments: --nthreads 6
[2025-04-11 01:04:17] Threads: 6
[2025-04-11 01:04:17] Checking for CVMFS
[2025-04-11 01:04:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-11 01:04:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-11 01:04:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-11 01:04:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-11 01:04:18] 2.11.5.0 905786 806 69956 144730 0 61 17821742 20971520 929 130560 0 1089396 99.994 231023 51 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-11 01:04:18] CVMFS is ok
[2025-04-11 01:04:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-11 01:04:18] Checking for apptainer binary...
[2025-04-11 01:04:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-11 01:04:18] Running /usr/bin/apptainer --version
[2025-04-11 01:04:18] apptainer version 1.3.6-1.el9
[2025-04-11 01:04:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-11 01:04:18] testio006
[2025-04-11 01:04:18] apptainer works
[2025-04-11 01:04:18] Set ATHENA_PROC_NUMBER=6
[2025-04-11 01:04:18] Set ATHENA_CORE_NUMBER=6
[2025-04-11 01:04:18] Starting ATLAS job with PandaID=6582531570
[2025-04-11 01:04:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 03:40:29]  *** The last 200 lines of the pilot log: ***
[2025-04-11 03:40:29] 2025-04-10 18:40:10,543 | INFO     | -- intersect: -85897564814.25638
[2025-04-11 03:40:29] 2025-04-10 18:40:10,543 | INFO     | intersect: -85897564814.25638
[2025-04-11 03:40:29] 2025-04-10 18:40:10,543 | INFO     | chi2: 3.3724241368802192
[2025-04-11 03:40:29] 2025-04-10 18:40:10,543 | INFO     | current chi2=3.3724241368802192 (change=43.20914081199929 %)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,543 | INFO     | model: linear, x: [1744301718.0, 1744301779.0, 1744301840.0, 1744301901.0, 1744301962.0, 1744302023.0, 1744302084.0, 1744302145.0, 1744302206.0, 1744302267.0, 1744
[2025-04-11 03:40:29] 2025-04-10 18:40:10,543 | INFO     | sum of square deviations: 887838515.3873258
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | sum of deviations: 16642636852.36619
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | mean x: 1744306018.528169
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | mean y: 2508498.408450704
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | -- intersect: -32694711911.202377
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | intersect: -32694711911.202377
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | chi2: 1.533712749231215
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | current chi2=1.533712749231215 (change=54.52194958342249 %)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | model: linear, x: [1744302023.0, 1744302084.0, 1744302145.0, 1744302206.0, 1744302267.0, 1744302328.0, 1744302389.0, 1744302450.0, 1744302511.0, 1744302572.0, 1744
[2025-04-11 03:40:29] 2025-04-10 18:40:10,544 | INFO     | sum of square deviations: 797314667.8832119
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | sum of deviations: -10785214986.562044
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | mean x: 1744306171.029197
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | mean y: 2554528.890510949
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | -- intersect: 23597651690.319355
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | intersect: 23597651690.319355
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | chi2: 0.0485933436822807
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | current chi2=0.0485933436822807 (change=96.83165288241631 %)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | model: linear, x: [1744302328.0, 1744302389.0, 1744302450.0, 1744302511.0, 1744302572.0, 1744302633.0, 1744302694.0, 1744302755.0, 1744302816.0, 1744302877.0, 1744
[2025-04-11 03:40:29] 2025-04-10 18:40:10,545 | INFO     | sum of square deviations: 713163032.8787876
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | sum of deviations: -12751727454.469694
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | mean x: 1744306323.530303
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | mean y: 2558002.992424242
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | -- intersect: 31191665975.933258
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | intersect: 31191665975.933258
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | chi2: 0.01802163031534247
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | current chi2=0.01802163031534247 (change=62.913376710246915 %)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | model: linear, x: [1744302633.0, 1744302694.0, 1744302755.0, 1744302816.0, 1744302877.0, 1744302938.0, 1744302999.0, 1744303060.0, 1744303121.0, 1744303182.0, 1744
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | sum of square deviations: 635151047.8740162
[2025-04-11 03:40:29] 2025-04-10 18:40:10,546 | INFO     | sum of deviations: -11719139504.047245
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | mean x: 1744306476.031496
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | mean y: 2555977.5118110236
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | -- intersect: 32186665566.63875
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | intersect: 32186665566.63875
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | chi2: 0.017708864080912046
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | current chi2=0.017708864080912046 (change=1.7355046627726916 %)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | left removable region: 50
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | model: linear, x: [1744304158.0, 1744304219.0, 1744304280.0, 1744304341.0, 1744304402.0, 1744304463.0, 1744304524.0, 1744304585.0, 1744304646.0, 1744304707.0, 1744
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | sum of square deviations: 274328483.8333326
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | sum of deviations: -2734189248.458333
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | mean x: 1744307055.5416667
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | mean y: 2534581.9895833335
[2025-04-11 03:40:29] 2025-04-10 18:40:10,547 | INFO     | -- intersect: 17387771180.93346
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | intersect: 17387771180.93346
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | chi2: 0.004945761261695168
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | -- intersect: 17387771180.93346
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | current memory leak: -9.97 B/s (using 96 data points, chi2=0.00)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | ..............................
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | . Timing measurements:
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | . get job = 0 s
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | . initial setup = 5 s
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | . payload setup = 5 s
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | . stage-in = 0 s
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | . payload execution = 9246 s
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | . stage-out = 0 s
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | . log creation = 0 s
[2025-04-11 03:40:29] 2025-04-10 18:40:10,548 | INFO     | ..............................
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | INFO     | 
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | WARNING  | process 1350790 can no longer be monitored (due to stat problems) - aborting
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | INFO     | job summary report
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | INFO     | --------------------------------------------------
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | INFO     | PanDA job id: 6582531570
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6582531570/memory_monitor_summary.json (trf name=prmon)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | INFO     | task id: 43634898
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | INFO     | errors: (none)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,601 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 03:40:29] 2025-04-10 18:40:10,602 | INFO     | pilot state: finished 
[2025-04-11 03:40:29] 2025-04-10 18:40:10,602 | INFO     | transexitcode: 0
[2025-04-11 03:40:29] 2025-04-10 18:40:10,602 | INFO     | exeerrorcode: 0
[2025-04-11 03:40:29] 2025-04-10 18:40:10,604 | INFO     | exeerrordiag: 
[2025-04-11 03:40:29] 2025-04-10 18:40:10,604 | INFO     | exitcode: 0
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | exitmsg: OK
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | cpuconsumptiontime: 49274 s
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | nevents: 400
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | neventsw: 0
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | pid: 1350790
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | pgrp: 1350790
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | corecount: 6
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | event service: False
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | sizes: {0: 2417391, 3: 2417597, 11: 2417625, 9255: 2445807, 9256: 2445806, 9257: 2454987, 9311: 2455101}
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | --------------------------------------------------
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | 
[2025-04-11 03:40:29] 2025-04-10 18:40:10,605 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-04-11 03:40:29] 2025-04-10 18:40:10,617 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,618 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 03:40:29] 2025-04-10 18:40:10,619 | INFO     | job 6582531570 has completed (purged errors)
[2025-04-11 03:40:29] 2025-04-10 18:40:10,619 | INFO     | overall cleanup function is called
[2025-04-11 03:40:29] 2025-04-10 18:40:10,643 | INFO     | number of running child processes to parent process 1350790: 1
[2025-04-11 03:40:29] 2025-04-10 18:40:10,643 | INFO     | maximum number of monitored processes: 6
[2025-04-11 03:40:29] 2025-04-10 18:40:10,643 | INFO     | aborting job monitoring since job object (job id=6582531570) has expired
[2025-04-11 03:40:29] 2025-04-10 18:40:11,625 | INFO     | --- collectZombieJob: --- 10, [1350790]
[2025-04-11 03:40:29] 2025-04-10 18:40:11,625 | INFO     | zombie collector waiting for pid 1350790
[2025-04-11 03:40:29] 2025-04-10 18:40:11,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 03:40:29] 2025-04-10 18:40:11,625 | INFO     | collected zombie processes
[2025-04-11 03:40:29] 2025-04-10 18:40:11,625 | INFO     | will attempt to kill all subprocesses of pid=1350790
[2025-04-11 03:40:29] 2025-04-10 18:40:11,668 | INFO     | process IDs to be killed: [1350790] (in reverse order)
[2025-04-11 03:40:29] 2025-04-10 18:40:11,702 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 03:40:29] 2025-04-10 18:40:11,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 03:40:29] 2025-04-10 18:40:11,708 | INFO     | did not find any defunct processes belonging to 1350790
[2025-04-11 03:40:29] 2025-04-10 18:40:11,713 | INFO     | did not find any defunct processes belonging to 1350790
[2025-04-11 03:40:29] 2025-04-10 18:40:11,714 | INFO     | ready for new job
[2025-04-11 03:40:29] 2025-04-10 18:40:11,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 03:40:29] 2025-04-10 18:40:11,715 | INFO     | ***************************************
[2025-04-11 03:40:29] 2025-04-10 18:40:11,715 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-11 03:40:29] 2025-04-10 18:40:11,715 | INFO     | ***************************************
[2025-04-11 03:40:29] 2025-04-10 18:40:11,715 | INFO     | 
[2025-04-11 03:40:29] 2025-04-10 18:40:11,716 | INFO     | architecture information:
[2025-04-11 03:40:29] 2025-04-10 18:40:11,716 | INFO     | executing command: cat /etc/os-release
[2025-04-11 03:40:29] 2025-04-10 18:40:11,724 | INFO     | cat /etc/os-release:
[2025-04-11 03:40:29] NAME="CentOS Linux"
[2025-04-11 03:40:29] VERSION="7 (Core)"
[2025-04-11 03:40:29] ID="centos"
[2025-04-11 03:40:29] ID_LIKE="rhel fedora"
[2025-04-11 03:40:29] VERSION_ID="7"
[2025-04-11 03:40:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 03:40:29] ANSI_COLOR="0;31"
[2025-04-11 03:40:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 03:40:29] HOME_URL="https://www.centos.org/"
[2025-04-11 03:40:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 03:40:29] 
[2025-04-11 03:40:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 03:40:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 03:40:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 03:40:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 03:40:29] 
[2025-04-11 03:40:29] 2025-04-10 18:40:11,724 | INFO     | ***************************************
[2025-04-11 03:40:29] 2025-04-10 18:40:11,730 | INFO     | PID=1344215 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-11 03:40:29] 2025-04-10 18:40:11,730 | INFO     | .. there are 2 such processes running
[2025-04-11 03:40:29] 2025-04-10 18:40:12,227 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-04-11 03:40:29] 2025-04-10 18:40:12,236 | INFO     | sufficient remaining disk space (78005665792 B)
[2025-04-11 03:40:29] 2025-04-10 18:40:12,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 03:40:29] 2025-04-10 18:40:12,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 03:40:29] 2025-04-10 18:40:12,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 03:40:29] 2025-04-10 18:40:12,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 03:40:29] 2025-04-10 18:40:12,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 03:40:29] 2025-04-10 18:40:12,237 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-11 03:40:29] 2025-04-10 18:40:12,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 03:40:29] 2025-04-10 18:40:12,237 | INFO     | aborting loop
[2025-04-11 03:40:29] 2025-04-10 18:40:12,237 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 03:40:29] 2025-04-10 18:40:12,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 03:40:29] 2025-04-10 18:40:12,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 03:40:29] 2025-04-10 18:40:13,033 | INFO     | all data control threads have been joined
[2025-04-11 03:40:29] 2025-04-10 18:40:13,242 | INFO     | [job] retrieve thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:13,242 | INFO     | [job] queue monitor thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:13,243 | INFO     | [job] job monitor thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:13,352 | INFO     | all payload control threads have been joined
[2025-04-11 03:40:29] 2025-04-10 18:40:13,403 | INFO     | [payload] validate_post thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:13,577 | INFO     | all job control threads have been joined
[2025-04-11 03:40:29] 2025-04-10 18:40:14,039 | INFO     | [data] control thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,242 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,243 | INFO     | [data] copytool_out thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,251 | INFO     | [job] validate thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,264 | INFO     | [payload] failed_post thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,358 | INFO     | [payload] control thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,493 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,582 | INFO     | [job] control thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,642 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:14,718 | INFO     | [data] copytool_in thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:16,242 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:22,271 | INFO     | job.realtimelogging is not enabled
[2025-04-11 03:40:29] 2025-04-10 18:40:23,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 03:40:29] 2025-04-10 18:40:23,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731190126400)>', '<ExcThread(monitor, started 139730687604480)>']
[2025-04-11 03:40:29] 2025-04-10 18:40:24,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 03:40:29] 2025-04-10 18:40:24,295 | INFO     | [monitor] control thread has ended
[2025-04-11 03:40:29] 2025-04-10 18:40:28,963 | INFO     | all workflow threads have been joined
[2025-04-11 03:40:29] 2025-04-10 18:40:28,964 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 03:40:29] 2025-04-10 18:40:28,964 | INFO     | traces error code: 0
[2025-04-11 03:40:29] 2025-04-10 18:40:28,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 03:40:29] 2025-04-10 18:40:29,030 [wrapper] ==== pilot stdout END ====
[2025-04-11 03:40:29] 2025-04-10 18:40:29,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 03:40:29] 2025-04-10 18:40:29,033 [wrapper] pilotpid: 1344215
[2025-04-11 03:40:29] 2025-04-10 18:40:29,035 [wrapper] Pilot exit status: 0
[2025-04-11 03:40:29] 2025-04-10 18:40:29,040 [wrapper] pandaids: 6582531570
[2025-04-11 03:40:29] 2025-04-10 18:40:29,063 [wrapper] cleanup supervisor_pilot 1428553 1344216
[2025-04-11 03:40:29] 2025-04-10 18:40:29,064 [wrapper] Test setup, not cleaning
[2025-04-11 03:40:29] 2025-04-10 18:40:29,066 [wrapper] apfmon messages muted
[2025-04-11 03:40:29] 2025-04-10 18:40:29,067 [wrapper] ==== wrapper stdout END ====
[2025-04-11 03:40:29] 2025-04-10 18:40:29,069 [wrapper] ==== wrapper stderr END ====
[2025-04-11 03:40:29]  *** Error codes and diagnostics ***
[2025-04-11 03:40:29]     "exeErrorCode": 0,
[2025-04-11 03:40:29]     "exeErrorDiag": "",
[2025-04-11 03:40:29]     "pilotErrorCode": 0,
[2025-04-11 03:40:29]     "pilotErrorDiag": "",
[2025-04-11 03:40:29]  *** Listing of results directory ***
[2025-04-11 03:40:29] total 674296
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc    494584 Apr  2 00:54 pilot3.tar.gz
[2025-04-11 03:40:29] -rwx------. 1 boinc boinc     37140 Apr  2 01:22 runpilot2-wrapper.sh
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc      5112 Apr  2 01:22 queuedata.json
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc       100 Apr 11 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 03:40:29] -rwxr-xr-x. 1 boinc boinc      7986 Apr 11 01:04 run_atlas
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc       105 Apr 11 01:04 job.xml
[2025-04-11 03:40:29] -rw-r--r--. 2 boinc boinc 362349861 Apr 11 01:04 EVNT.43634896._000101.pool.root.1
[2025-04-11 03:40:29] -rw-r--r--. 2 boinc boinc     17571 Apr 11 01:04 start_atlas.sh
[2025-04-11 03:40:29] drwxrwx--x. 2 boinc boinc        68 Apr 11 01:04 shared
[2025-04-11 03:40:29] -rw-r--r--. 2 boinc boinc    507246 Apr 11 01:04 input.tar.gz
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc      9465 Apr 11 01:04 init_data.xml
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc         0 Apr 11 01:04 boinc_lockfile
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc      2594 Apr 11 01:04 pandaJob.out
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc       424 Apr 11 01:04 setup.sh.local
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc    986110 Apr 11 01:04 agis_schedconf.cvmfs.json
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc   1603528 Apr 11 01:04 agis_ddmendpoints.agis.ALL.json
[2025-04-11 03:40:29] drwx------. 4 boinc boinc      4096 Apr 11 01:04 pilot3
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc 321820614 Apr 11 03:38 HITS.43634898._006240.pool.root.1
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc       530 Apr 11 03:39 boinc_task_state.xml
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc      1019 Apr 11 03:39 memory_monitor_summary.json
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc    321621 Apr 11 03:39 log.43634898._006240.job.log.tgz.1
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc        95 Apr 11 03:39 pilot_heartbeat.json
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc      8192 Apr 11 03:39 boinc_mmap_file
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc        27 Apr 11 03:40 wrapper_checkpoint.txt
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc      7662 Apr 11 03:40 heartbeat.json
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc      4808 Apr 11 03:40 pilotlog.txt
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc    916401 Apr 11 03:40 log.43634898._006240.job.log.1
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc       357 Apr 11 03:40 output.list
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc       620 Apr 11 03:40 runtime_log
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc   1259520 Apr 11 03:40 result.tar.gz
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc     10972 Apr 11 03:40 runtime_log.err
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc       645 Apr 11 03:40 1WkNDmbYtJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm93DLDmJoXUNn.diag
[2025-04-11 03:40:29] -rw-r--r--. 1 boinc boinc     21522 Apr 11 03:40 stderr.txt
[2025-04-11 03:40:29] HITS file was successfully produced:
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc 321820614 Apr 11 03:38 shared/HITS.pool.root.1
[2025-04-11 03:40:29]  *** Contents of shared directory: ***
[2025-04-11 03:40:29] total 669892
[2025-04-11 03:40:29] -rw-r--r--. 2 boinc boinc 362349861 Apr 11 01:04 ATLAS.root_0
[2025-04-11 03:40:29] -rw-r--r--. 2 boinc boinc     17571 Apr 11 01:04 start_atlas.sh
[2025-04-11 03:40:29] -rw-r--r--. 2 boinc boinc    507246 Apr 11 01:04 input.tar.gz
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc 321820614 Apr 11 03:38 HITS.pool.root.1
[2025-04-11 03:40:29] -rw-------. 1 boinc boinc   1259520 Apr 11 03:40 result.tar.gz
03:40:30 (1340460): run_atlas exited; CPU time 49254.606742
03:40:30 (1340460): called boinc_finish(0)

</stderr_txt>
]]>

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