Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:15:20 (30140): wrapper (7.7.26015): starting
08:15:20 (30140): wrapper: running run_atlas (--nthreads 8)
[2025-04-10 08:15:20] Arguments: --nthreads 8
[2025-04-10 08:15:20] Threads: 8
[2025-04-10 08:15:20] Checking for CVMFS
[2025-04-10 08:15:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-10 08:15:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-10 08:15:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-10 08:15:22] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/patatrack.cern.ch: Transport endpoint is not connected
[2025-04-10 08:15:22] 
[2025-04-10 08:15:22] CVMFS is ok
[2025-04-10 08:15:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-10 08:15:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-10 08:15:22] Further information can be found at the LHC@home message board.
[2025-04-10 08:15:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-10 08:15:22] Checking for apptainer binary...
[2025-04-10 08:15:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-10 08:15:22] Running /usr/bin/apptainer --version
[2025-04-10 08:15:25] apptainer version 1.3.2-1.el7
[2025-04-10 08:15:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-10 08:16:15] c-211-10.aglt2.org
[2025-04-10 08:16:15] apptainer works
[2025-04-10 08:16:15] Set ATHENA_PROC_NUMBER=8
[2025-04-10 08:16:15] Set ATHENA_CORE_NUMBER=8
[2025-04-10 08:16:16] Starting ATLAS job with PandaID=6595757917
[2025-04-10 08:16:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-11 10:33:58]  *** The last 200 lines of the pilot log: ***
[2025-04-11 10:33:58] 2025-04-11 14:33:26,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-11 10:33:58] 2025-04-11 14:33:26,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-11 10:33:58] 2025-04-11 14:33:26,598 | INFO     | fitting pss+swap vs Time
[2025-04-11 10:33:58] 2025-04-11 14:33:26,636 | INFO     | sum of square deviations: 1130309484916.2405
[2025-04-11 10:33:58] 2025-04-11 14:33:27,074 | INFO     | sum of deviations: 1750867267883.8484
[2025-04-11 10:33:58] 2025-04-11 14:33:27,074 | INFO     | mean x: 1744334963.1390514
[2025-04-11 10:33:58] 2025-04-11 14:33:27,074 | INFO     | mean y: 2447844.1689408706
[2025-04-11 10:33:58] 2025-04-11 14:33:27,074 | INFO     | -- intersect: -2699554600.242877
[2025-04-11 10:33:58] 2025-04-11 14:33:27,075 | INFO     | intersect: -2699554600.242877
[2025-04-11 10:33:58] 2025-04-11 14:33:27,077 | INFO     | chi2: 18.002072098747753
[2025-04-11 10:33:58] 2025-04-11 14:33:27,091 | INFO     | sum of square deviations: 1119329190432.2358
[2025-04-11 10:33:58] 2025-04-11 14:33:27,689 | INFO     | sum of deviations: 2262778817955.1606
[2025-04-11 10:33:58] 2025-04-11 14:33:27,690 | INFO     | mean x: 1744334810.642764
[2025-04-11 10:33:58] 2025-04-11 14:33:27,690 | INFO     | mean y: 2454953.6225554105
[2025-04-11 10:33:58] 2025-04-11 14:33:27,690 | INFO     | -- intersect: -3523803357.7684817
[2025-04-11 10:33:58] 2025-04-11 14:33:27,690 | INFO     | intersect: -3523803357.7684817
[2025-04-11 10:33:58] 2025-04-11 14:33:27,711 | INFO     | chi2: 14.067760464902067
[2025-04-11 10:33:58] 2025-04-11 14:33:27,711 | INFO     | current chi2=14.067760464902067 (change=21.854771007829495 %)
[2025-04-11 10:33:58] 2025-04-11 14:33:27,711 | INFO     | right removable region: 1533
[2025-04-11 10:33:58] 2025-04-11 14:33:27,730 | INFO     | sum of square deviations: 1119328121102.2336
[2025-04-11 10:33:58] 2025-04-11 14:33:27,851 | INFO     | sum of deviations: 1200350600447.827
[2025-04-11 10:33:58] 2025-04-11 14:33:27,851 | INFO     | mean x: 1744335115.642764
[2025-04-11 10:33:58] 2025-04-11 14:33:27,852 | INFO     | mean y: 2455488.850065189
[2025-04-11 10:33:58] 2025-04-11 14:33:27,852 | INFO     | -- intersect: -1868143189.02661
[2025-04-11 10:33:58] 2025-04-11 14:33:27,852 | INFO     | intersect: -1868143189.02661
[2025-04-11 10:33:58] 2025-04-11 14:33:27,854 | INFO     | chi2: 13.220292967509994
[2025-04-11 10:33:58] 2025-04-11 14:33:27,854 | INFO     | current chi2=13.220292967509994 (change=26.56238184697852 %)
[2025-04-11 10:33:58] 2025-04-11 14:33:27,856 | INFO     | sum of square deviations: 1108418107463.1846
[2025-04-11 10:33:58] 2025-04-11 14:33:28,566 | INFO     | sum of deviations: 735211499782.3375
[2025-04-11 10:33:58] 2025-04-11 14:33:28,566 | INFO     | mean x: 1744335268.146501
[2025-04-11 10:33:58] 2025-04-11 14:33:28,566 | INFO     | mean y: 2461990.3243950293
[2025-04-11 10:33:58] 2025-04-11 14:33:28,567 | INFO     | -- intersect: -1154552082.2373986
[2025-04-11 10:33:58] 2025-04-11 14:33:28,567 | INFO     | intersect: -1154552082.2373986
[2025-04-11 10:33:58] 2025-04-11 14:33:28,585 | INFO     | chi2: 9.88006706320591
[2025-04-11 10:33:58] 2025-04-11 14:33:28,586 | INFO     | current chi2=9.88006706320591 (change=25.26589926950164 %)
[2025-04-11 10:33:58] 2025-04-11 14:33:28,602 | INFO     | sum of square deviations: 1097579211436.5898
[2025-04-11 10:33:58] 2025-04-11 14:33:28,691 | INFO     | monitor loop #3853: job 0:6595757917 is in state 'finished'
[2025-04-11 10:33:58] 2025-04-11 14:33:28,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-11 10:33:58] 2025-04-11 14:33:28,743 | INFO     | sum of deviations: 369341971419.6779
[2025-04-11 10:33:58] 2025-04-11 14:33:28,743 | INFO     | mean x: 1744335420.6502624
[2025-04-11 10:33:58] 2025-04-11 14:33:28,744 | INFO     | mean y: 2467137.680446194
[2025-04-11 10:33:58] 2025-04-11 14:33:28,744 | INFO     | -- intersect: -584512167.6554235
[2025-04-11 10:33:58] 2025-04-11 14:33:28,744 | INFO     | intersect: -584512167.6554235
[2025-04-11 10:33:58] 2025-04-11 14:33:28,746 | INFO     | chi2: 7.839072725263769
[2025-04-11 10:33:58] 2025-04-11 14:33:28,746 | INFO     | current chi2=7.839072725263769 (change=20.6576972087867 %)
[2025-04-11 10:33:58] 2025-04-11 14:33:28,747 | INFO     | left removable region: 30
[2025-04-11 10:33:58] 2025-04-11 14:33:28,749 | INFO     | sum of square deviations: 1052828671767.0803
[2025-04-11 10:33:58] 2025-04-11 14:33:28,816 | INFO     | sum of deviations: 287535146697.9241
[2025-04-11 10:33:58] 2025-04-11 14:33:28,816 | INFO     | mean x: 1744335695.1650033
[2025-04-11 10:33:58] 2025-04-11 14:33:28,816 | INFO     | mean y: 2485937.1696606786
[2025-04-11 10:33:58] 2025-04-11 14:33:28,817 | INFO     | -- intersect: -473904793.29731447
[2025-04-11 10:33:58] 2025-04-11 14:33:28,817 | INFO     | intersect: -473904793.29731447
[2025-04-11 10:33:58] 2025-04-11 14:33:28,819 | INFO     | chi2: 0.08488866709037136
[2025-04-11 10:33:58] 2025-04-11 14:33:28,819 | INFO     | -- intersect: -473904793.29731447
[2025-04-11 10:33:58] 2025-04-11 14:33:28,819 | INFO     | current memory leak: 0.27 B/s (using 1503 data points, chi2=0.08)
[2025-04-11 10:33:58] 2025-04-11 14:33:28,822 | INFO     | ..............................
[2025-04-11 10:33:58] 2025-04-11 14:33:28,822 | INFO     | . Timing measurements:
[2025-04-11 10:33:58] 2025-04-11 14:33:28,822 | INFO     | . get job = 1 s
[2025-04-11 10:33:58] 2025-04-11 14:33:28,822 | INFO     | . initial setup = 14 s
[2025-04-11 10:33:58] 2025-04-11 14:33:28,822 | INFO     | . payload setup = 157 s
[2025-04-11 10:33:58] 2025-04-11 14:33:28,822 | INFO     | . stage-in = 1 s
[2025-04-11 10:33:58] 2025-04-11 14:33:28,823 | INFO     | . payload execution = 93963 s
[2025-04-11 10:33:58] 2025-04-11 14:33:28,823 | INFO     | . stage-out = 18 s
[2025-04-11 10:33:58] 2025-04-11 14:33:28,823 | INFO     | . log creation = 6 s
[2025-04-11 10:33:58] 2025-04-11 14:33:28,823 | INFO     | ..............................
[2025-04-11 10:33:58] 2025-04-11 14:33:29,804 | INFO     | 
[2025-04-11 10:33:58] 2025-04-11 14:33:29,805 | INFO     | job summary report
[2025-04-11 10:33:58] 2025-04-11 14:33:29,805 | INFO     | --------------------------------------------------
[2025-04-11 10:33:58] 2025-04-11 14:33:29,805 | INFO     | PanDA job id: 6595757917
[2025-04-11 10:33:58] 2025-04-11 14:33:29,805 | INFO     | task id: 44075164
[2025-04-11 10:33:58] 2025-04-11 14:33:29,805 | INFO     | errors: (none)
[2025-04-11 10:33:58] 2025-04-11 14:33:29,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-11 10:33:58] 2025-04-11 14:33:29,806 | INFO     | pilot state: finished 
[2025-04-11 10:33:58] 2025-04-11 14:33:29,806 | INFO     | transexitcode: 0
[2025-04-11 10:33:58] 2025-04-11 14:33:29,806 | INFO     | exeerrorcode: 0
[2025-04-11 10:33:58] 2025-04-11 14:33:29,806 | INFO     | exeerrordiag: 
[2025-04-11 10:33:58] 2025-04-11 14:33:29,816 | INFO     | exitcode: 0
[2025-04-11 10:33:58] 2025-04-11 14:33:29,817 | INFO     | exitmsg: OK
[2025-04-11 10:33:58] 2025-04-11 14:33:29,817 | INFO     | cpuconsumptiontime: 64068 s
[2025-04-11 10:33:58] 2025-04-11 14:33:29,817 | INFO     | nevents: 400
[2025-04-11 10:33:58] 2025-04-11 14:33:29,817 | INFO     | neventsw: 0
[2025-04-11 10:33:58] 2025-04-11 14:33:29,817 | INFO     | pid: 15935
[2025-04-11 10:33:58] 2025-04-11 14:33:29,817 | INFO     | pgrp: 15935
[2025-04-11 10:33:58] 2025-04-11 14:33:29,818 | INFO     | corecount: 8
[2025-04-11 10:33:58] 2025-04-11 14:33:29,818 | INFO     | event service: False
[2025-04-11 10:33:58] 2025-04-11 14:33:29,818 | INFO     | sizes: {0: 2416497, 2: 2417182, 3: 2417381, 4: 2417381, 15: 2417409, 27: 2417437, 38: 2417593, 49: 2417621, 60: 2417649, 72: 2417677, 76: 2417911, 83: 2418247, 941
[2025-04-11 10:33:58] 2025-04-11 14:33:29,818 | INFO     | --------------------------------------------------
[2025-04-11 10:33:58] 2025-04-11 14:33:29,831 | INFO     | 
[2025-04-11 10:33:58] 2025-04-11 14:33:29,831 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-11 10:33:58] 2025-04-11 14:33:30,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-11 10:33:58] 2025-04-11 14:33:30,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-11 10:33:58] 2025-04-11 14:33:30,188 | INFO     | job 6595757917 has completed (purged errors)
[2025-04-11 10:33:58] 2025-04-11 14:33:30,189 | INFO     | overall cleanup function is called
[2025-04-11 10:33:58] 2025-04-11 14:33:31,206 | INFO     | --- collectZombieJob: --- 10, [15935]
[2025-04-11 10:33:58] 2025-04-11 14:33:31,223 | INFO     | zombie collector waiting for pid 15935
[2025-04-11 10:33:58] 2025-04-11 14:33:31,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-11 10:33:58] 2025-04-11 14:33:31,224 | INFO     | collected zombie processes
[2025-04-11 10:33:58] 2025-04-11 14:33:31,224 | INFO     | will attempt to kill all subprocesses of pid=15935
[2025-04-11 10:33:58] 2025-04-11 14:33:36,106 | INFO     | process IDs to be killed: [15935] (in reverse order)
[2025-04-11 10:33:58] 2025-04-11 14:33:37,487 | WARNING  | found no corresponding commands to process id(s)
[2025-04-11 10:33:58] 2025-04-11 14:33:37,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-11 10:33:58] 2025-04-11 14:33:37,510 | INFO     | did not find any defunct processes belonging to 15935
[2025-04-11 10:33:58] 2025-04-11 14:33:37,537 | INFO     | did not find any defunct processes belonging to 15935
[2025-04-11 10:33:58] 2025-04-11 14:33:37,538 | INFO     | ready for new job
[2025-04-11 10:33:58] 2025-04-11 14:33:37,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-11 10:33:58] 2025-04-11 14:33:37,543 | INFO     | **************************************
[2025-04-11 10:33:58] 2025-04-11 14:33:37,544 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-11 10:33:58] 2025-04-11 14:33:37,544 | INFO     | **************************************
[2025-04-11 10:33:58] 2025-04-11 14:33:37,544 | INFO     | 
[2025-04-11 10:33:58] 2025-04-11 14:33:37,547 | INFO     | architecture information:
[2025-04-11 10:33:58] 2025-04-11 14:33:37,548 | INFO     | executing command: cat /etc/os-release
[2025-04-11 10:33:58] 2025-04-11 14:33:37,743 | INFO     | cat /etc/os-release:
[2025-04-11 10:33:58] NAME="CentOS Linux"
[2025-04-11 10:33:58] VERSION="7 (Core)"
[2025-04-11 10:33:58] ID="centos"
[2025-04-11 10:33:58] ID_LIKE="rhel fedora"
[2025-04-11 10:33:58] VERSION_ID="7"
[2025-04-11 10:33:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-11 10:33:58] ANSI_COLOR="0;31"
[2025-04-11 10:33:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-11 10:33:58] HOME_URL="https://www.centos.org/"
[2025-04-11 10:33:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-11 10:33:58] 
[2025-04-11 10:33:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-11 10:33:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-11 10:33:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-11 10:33:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-11 10:33:58] 
[2025-04-11 10:33:58] 2025-04-11 14:33:37,743 | INFO     | **************************************
[2025-04-11 10:33:58] 2025-04-11 14:33:38,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-11 10:33:58] 2025-04-11 14:33:38,841 | INFO     | sufficient remaining disk space (56400805888 B)
[2025-04-11 10:33:58] 2025-04-11 14:33:38,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-11 10:33:58] 2025-04-11 14:33:38,842 | INFO     | current server update state: UPDATING_FINAL
[2025-04-11 10:33:58] 2025-04-11 14:33:38,848 | INFO     | update_server=False
[2025-04-11 10:33:58] 2025-04-11 14:33:38,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-11 10:33:58] 2025-04-11 14:33:38,849 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-11 10:33:58] 2025-04-11 14:33:38,849 | INFO     | found 0 job(s) in 20 queues
[2025-04-11 10:33:58] 2025-04-11 14:33:38,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-11 10:33:58] 2025-04-11 14:33:38,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-11 10:33:58] 2025-04-11 14:33:38,929 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-11 10:33:58] 2025-04-11 14:33:38,930 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-11 10:33:58] 2025-04-11 14:33:38,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-11 10:33:58] 2025-04-11 14:33:38,930 | INFO     | will abort loop
[2025-04-11 10:33:58] 2025-04-11 14:33:38,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-11 10:33:58] 2025-04-11 14:33:39,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-11 10:33:58] 2025-04-11 14:33:39,392 | INFO     | all data control threads have been joined
[2025-04-11 10:33:58] 2025-04-11 14:33:39,735 | INFO     | all payload control threads have been joined
[2025-04-11 10:33:58] 2025-04-11 14:33:39,854 | INFO     | [job] retrieve thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:39,935 | INFO     | [job] job monitor thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:39,965 | INFO     | [job] queue monitor thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,171 | INFO     | all job control threads have been joined
[2025-04-11 10:33:58] 2025-04-11 14:33:40,172 | INFO     | [payload] validate_post thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,398 | INFO     | [data] control thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,469 | INFO     | [job] create_data_payload thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,686 | INFO     | [payload] execute_payloads thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,695 | INFO     | [payload] validate_pre thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,702 | INFO     | [data] copytool_in thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,713 | INFO     | [job] validate thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:40,740 | INFO     | [payload] control thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:41,086 | INFO     | [payload] failed_post thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:41,100 | INFO     | [data] copytool_out thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:41,177 | INFO     | [job] control thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:41,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-11 10:33:58] 2025-04-11 14:33:45,238 | INFO     | [data] queue_monitor thread has finished
[2025-04-11 10:33:58] 2025-04-11 14:33:46,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483129771840)>', '<ExcThread(monitor, started 140482457884416)>']
[2025-04-11 10:33:58] 2025-04-11 14:33:46,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-11 10:33:58] 2025-04-11 14:33:46,900 | INFO     | [monitor] control thread has ended
[2025-04-11 10:33:58] 2025-04-11 14:33:51,264 | INFO     | all workflow threads have been joined
[2025-04-11 10:33:58] 2025-04-11 14:33:51,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-11 10:33:58] 2025-04-11 14:33:51,265 | INFO     | traces error code: 0
[2025-04-11 10:33:58] 2025-04-11 14:33:51,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-11 10:33:58] 2025-04-11 14:33:53,735 [wrapper] ==== pilot stdout END ====
[2025-04-11 10:33:58] 2025-04-11 14:33:53,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-11 10:33:58] 2025-04-11 14:33:53,818 [wrapper] pilotpid: 4109
[2025-04-11 10:33:58] 2025-04-11 14:33:53,855 [wrapper] Pilot exit status: 0
[2025-04-11 10:33:58] 2025-04-11 14:33:54,227 [wrapper] pandaids: 6595757917
[2025-04-11 10:33:58] 2025-04-11 14:33:55,838 [wrapper] cleanup supervisor_pilot 28686 4111
[2025-04-11 10:33:58] 2025-04-11 14:33:55,874 [wrapper] Test setup, not cleaning
[2025-04-11 10:33:58] 2025-04-11 14:33:55,917 [wrapper] apfmon messages muted
[2025-04-11 10:33:58] 2025-04-11 14:33:55,967 [wrapper] ==== wrapper stdout END ====
[2025-04-11 10:33:58] 2025-04-11 14:33:56,007 [wrapper] ==== wrapper stderr END ====
[2025-04-11 10:33:58]  *** Error codes and diagnostics ***
[2025-04-11 10:33:58]     "exeErrorCode": 0,
[2025-04-11 10:33:58]     "exeErrorDiag": "",
[2025-04-11 10:33:58]     "pilotErrorCode": 0,
[2025-04-11 10:33:58]     "pilotErrorDiag": "",
[2025-04-11 10:33:58]  *** Listing of results directory ***
[2025-04-11 10:33:58] total 420164
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas    495897 Apr 10 04:38 pilot3.tar.gz
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas      5111 Apr 10 04:57 queuedata.json
[2025-04-11 10:33:58] -rwx------ 1 boincer umatlas     37140 Apr 10 04:57 runpilot2-wrapper.sh
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas       100 Apr 10 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-11 10:33:58] -rwxr-xr-x 1 boincer umatlas      7986 Apr 10 08:15 run_atlas
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas       105 Apr 10 08:15 job.xml
[2025-04-11 10:33:58] -rw-r--r-- 2 boincer umatlas 219216406 Apr 10 08:15 EVNT.44075162._000962.pool.root.1
[2025-04-11 10:33:58] -rw-r--r-- 2 boincer umatlas     17569 Apr 10 08:15 start_atlas.sh
[2025-04-11 10:33:58] drwxrwx--x 2 boincer umatlas      4096 Apr 10 08:15 shared
[2025-04-11 10:33:58] -rw-r--r-- 2 boincer umatlas    508883 Apr 10 08:15 input.tar.gz
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas         0 Apr 10 08:15 boinc_lockfile
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas      2549 Apr 10 08:16 pandaJob.out
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas       424 Apr 10 08:16 setup.sh.local
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas    986466 Apr 10 08:19 agis_schedconf.cvmfs.json
[2025-04-11 10:33:58] drwx------ 4 boincer umatlas      4096 Apr 10 08:19 pilot3
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas 193727882 Apr 11 10:25 HITS.44075164._024184.pool.root.1
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas       531 Apr 11 10:26 boinc_task_state.xml
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas      6047 Apr 11 10:28 init_data.xml
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas      1062 Apr 11 10:31 memory_monitor_summary.json
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas   1603528 Apr 11 10:31 agis_ddmendpoints.agis.ALL.json
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas    958710 Apr 11 10:31 log.44075164._024184.job.log.tgz.1
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas        95 Apr 11 10:33 pilot_heartbeat.json
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas      7766 Apr 11 10:33 heartbeat.json
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas      8192 Apr 11 10:33 boinc_mmap_file
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas        28 Apr 11 10:33 wrapper_checkpoint.txt
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas      4662 Apr 11 10:33 pilotlog.txt
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas   5772152 Apr 11 10:33 log.44075164._024184.job.log.1
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas       357 Apr 11 10:33 output.list
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas       620 Apr 11 10:33 runtime_log
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas   6748160 Apr 11 10:33 result.tar.gz
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas     11014 Apr 11 10:33 runtime_log.err
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas       665 Apr 11 10:33 4fgNDmTu2M7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHxNLDmQ1QAEn.diag
[2025-04-11 10:33:58] -rw-r--r-- 1 boincer umatlas     20728 Apr 11 10:33 stderr.txt
[2025-04-11 10:33:58] HITS file was successfully produced:
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas 193727882 Apr 11 10:25 shared/HITS.pool.root.1
[2025-04-11 10:33:58]  *** Contents of shared directory: ***
[2025-04-11 10:33:58] total 410384
[2025-04-11 10:33:58] -rw-r--r-- 2 boincer umatlas 219216406 Apr 10 08:15 ATLAS.root_0
[2025-04-11 10:33:58] -rw-r--r-- 2 boincer umatlas     17569 Apr 10 08:15 start_atlas.sh
[2025-04-11 10:33:58] -rw-r--r-- 2 boincer umatlas    508883 Apr 10 08:15 input.tar.gz
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas 193727882 Apr 11 10:25 HITS.pool.root.1
[2025-04-11 10:33:58] -rw------- 1 boincer umatlas   6748160 Apr 11 10:33 result.tar.gz
10:34:00 (30140): run_atlas exited; CPU time 68386.875526
10:34:00 (30140): called boinc_finish(0)

</stderr_txt>
]]>

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