Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:25:42 (4019247): wrapper (7.7.26015): starting
21:25:42 (4019247): wrapper: running run_atlas (--nthreads 12)
[2025-04-09 21:25:42] Arguments: --nthreads 12
[2025-04-09 21:25:42] Threads: 12
[2025-04-09 21:25:42] Checking for CVMFS
[2025-04-09 21:25:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-09 21:25:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-09 21:25:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-09 21:25:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-09 21:25:45] 2.11.5.0 2305 9329 245516 144709 2 526 31748924 45568001 15099 130560 0 67154280 99.742 67971338 28166 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-09 21:25:45] CVMFS is ok
[2025-04-09 21:25:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-09 21:25:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-09 21:25:45] Further information can be found at the LHC@home message board.
[2025-04-09 21:25:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-09 21:25:45] Checking for apptainer binary...
[2025-04-09 21:25:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-09 21:25:45] Running /usr/bin/apptainer --version
[2025-04-09 21:25:45] apptainer version 1.3.5-1.el9
[2025-04-09 21:25:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-09 21:25:46] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0167.triumf.lcg
[2025-04-09 21:25:46] apptainer works
[2025-04-09 21:25:46] Set ATHENA_PROC_NUMBER=12
[2025-04-09 21:25:46] Set ATHENA_CORE_NUMBER=12
[2025-04-09 21:25:46] Starting ATLAS job with PandaID=6595182099
[2025-04-09 21:25:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-10 02:32:19]  *** The last 200 lines of the pilot log: ***
[2025-04-10 02:32:19] 2025-04-10 09:32:00,993 | INFO     | sum of deviations: 89049524226.36446
[2025-04-10 02:32:19] 2025-04-10 09:32:00,993 | INFO     | mean x: 1744268370.5852842
[2025-04-10 02:32:19] 2025-04-10 09:32:00,993 | INFO     | mean y: 2702338.9464882943
[2025-04-10 02:32:19] 2025-04-10 09:32:00,993 | INFO     | -- intersect: -18737628787.93325
[2025-04-10 02:32:19] 2025-04-10 09:32:00,993 | INFO     | intersect: -18737628787.93325
[2025-04-10 02:32:19] 2025-04-10 09:32:00,994 | INFO     | chi2: 6.030186502347352
[2025-04-10 02:32:19] 2025-04-10 09:32:00,994 | INFO     | sum of square deviations: 7879485111.333355
[2025-04-10 02:32:19] 2025-04-10 09:32:00,996 | INFO     | sum of deviations: 108161916839.19057
[2025-04-10 02:32:19] 2025-04-10 09:32:00,996 | INFO     | mean x: 1744268218.0952382
[2025-04-10 02:32:19] 2025-04-10 09:32:00,996 | INFO     | mean y: 2709362.4217687077
[2025-04-10 02:32:19] 2025-04-10 09:32:00,996 | INFO     | -- intersect: -23940910212.352062
[2025-04-10 02:32:19] 2025-04-10 09:32:00,996 | INFO     | intersect: -23940910212.352062
[2025-04-10 02:32:19] 2025-04-10 09:32:00,996 | INFO     | chi2: 5.3679062278813845
[2025-04-10 02:32:19] 2025-04-10 09:32:00,996 | INFO     | current chi2=5.3679062278813845 (change=10.982749442461913 %)
[2025-04-10 02:32:19] 2025-04-10 09:32:00,997 | INFO     | right removable region: 293
[2025-04-10 02:32:19] 2025-04-10 09:32:00,997 | INFO     | sum of square deviations: 7879378361.333355
[2025-04-10 02:32:19] 2025-04-10 09:32:00,999 | INFO     | sum of deviations: 4782924961.190479
[2025-04-10 02:32:19] 2025-04-10 09:32:00,999 | INFO     | mean x: 1744268523.0952382
[2025-04-10 02:32:19] 2025-04-10 09:32:00,999 | INFO     | mean y: 2733696.636054422
[2025-04-10 02:32:19] 2025-04-10 09:32:00,999 | INFO     | -- intersect: -1056068797.1077931
[2025-04-10 02:32:19] 2025-04-10 09:32:00,999 | INFO     | intersect: -1056068797.1077931
[2025-04-10 02:32:19] 2025-04-10 09:32:00,999 | INFO     | chi2: 3.265346808934591
[2025-04-10 02:32:19] 2025-04-10 09:32:00,999 | INFO     | current chi2=3.265346808934591 (change=45.8499864363482 %)
[2025-04-10 02:32:19] 2025-04-10 09:32:00,999 | INFO     | sum of square deviations: 7484089667.031115
[2025-04-10 02:32:19] 2025-04-10 09:32:01,001 | INFO     | sum of deviations: -54592063195.91693
[2025-04-10 02:32:19] 2025-04-10 09:32:01,001 | INFO     | mean x: 1744268675.6055362
[2025-04-10 02:32:19] 2025-04-10 09:32:01,001 | INFO     | mean y: 2756600.948096886
[2025-04-10 02:32:19] 2025-04-10 09:32:01,001 | INFO     | -- intersect: 12726177886.07684
[2025-04-10 02:32:19] 2025-04-10 09:32:01,001 | INFO     | intersect: 12726177886.07684
[2025-04-10 02:32:19] 2025-04-10 09:32:01,002 | INFO     | chi2: 1.9572446723166301
[2025-04-10 02:32:19] 2025-04-10 09:32:01,002 | INFO     | current chi2=1.9572446723166301 (change=40.06012877525757 %)
[2025-04-10 02:32:19] 2025-04-10 09:32:01,002 | INFO     | sum of square deviations: 7102243085.165492
[2025-04-10 02:32:19] 2025-04-10 09:32:01,004 | INFO     | sum of deviations: -98291305342.22882
[2025-04-10 02:32:19] 2025-04-10 09:32:01,004 | INFO     | mean x: 1744268828.116197
[2025-04-10 02:32:19] 2025-04-10 09:32:01,004 | INFO     | mean y: 2773996.158450704
[2025-04-10 02:32:19] 2025-04-10 09:32:01,004 | INFO     | -- intersect: 24142536311.729187
[2025-04-10 02:32:19] 2025-04-10 09:32:01,004 | INFO     | intersect: 24142536311.729187
[2025-04-10 02:32:19] 2025-04-10 09:32:01,004 | INFO     | chi2: 1.1213051161985481
[2025-04-10 02:32:19] 2025-04-10 09:32:01,004 | INFO     | current chi2=1.1213051161985481 (change=42.71001821804163 %)
[2025-04-10 02:32:19] 2025-04-10 09:32:01,005 | INFO     | sum of square deviations: 6733640457.727637
[2025-04-10 02:32:19] 2025-04-10 09:32:01,006 | INFO     | sum of deviations: -95547988337.91757
[2025-04-10 02:32:19] 2025-04-10 09:32:01,006 | INFO     | mean x: 1744268980.6200716
[2025-04-10 02:32:19] 2025-04-10 09:32:01,006 | INFO     | mean y: 2772821.878136201
[2025-04-10 02:32:19] 2025-04-10 09:32:01,006 | INFO     | -- intersect: 24753335799.622902
[2025-04-10 02:32:19] 2025-04-10 09:32:01,006 | INFO     | intersect: 24753335799.622902
[2025-04-10 02:32:19] 2025-04-10 09:32:01,007 | INFO     | chi2: 1.0858855431823562
[2025-04-10 02:32:19] 2025-04-10 09:32:01,007 | INFO     | current chi2=1.0858855431823562 (change=3.1587810047876586 %)
[2025-04-10 02:32:19] 2025-04-10 09:32:01,007 | INFO     | left removable region: 40
[2025-04-10 02:32:19] 2025-04-10 09:32:01,007 | INFO     | sum of square deviations: 5021097636.039559
[2025-04-10 02:32:19] 2025-04-10 09:32:01,008 | INFO     | sum of deviations: -16136413022.29249
[2025-04-10 02:32:19] 2025-04-10 09:32:01,008 | INFO     | mean x: 1744269407.6126482
[2025-04-10 02:32:19] 2025-04-10 09:32:01,009 | INFO     | mean y: 2753955.466403162
[2025-04-10 02:32:19] 2025-04-10 09:32:01,009 | INFO     | -- intersect: 5608351301.625116
[2025-04-10 02:32:19] 2025-04-10 09:32:01,009 | INFO     | intersect: 5608351301.625116
[2025-04-10 02:32:19] 2025-04-10 09:32:01,009 | INFO     | chi2: 0.15876035991914245
[2025-04-10 02:32:19] 2025-04-10 09:32:01,009 | INFO     | -- intersect: 5608351301.625116
[2025-04-10 02:32:19] 2025-04-10 09:32:01,009 | INFO     | current memory leak: -3.21 B/s (using 253 data points, chi2=0.16)
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | ..............................
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | . Timing measurements:
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | . get job = 0 s
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | . initial setup = 6 s
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | . payload setup = 25 s
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | . stage-in = 0 s
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | . payload execution = 18221 s
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | . stage-out = 4 s
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | . log creation = 0 s
[2025-04-10 02:32:19] 2025-04-10 09:32:01,010 | INFO     | ..............................
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | 
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | job summary report
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | --------------------------------------------------
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | PanDA job id: 6595182099
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | task id: 44075483
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | errors: (none)
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | pilot state: finished 
[2025-04-10 02:32:19] 2025-04-10 09:32:01,237 | INFO     | transexitcode: 0
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | exeerrorcode: 0
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | exeerrordiag: 
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | exitcode: 0
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | exitmsg: OK
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | cpuconsumptiontime: 33238 s
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | nevents: 400
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | neventsw: 0
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | pid: 4031623
[2025-04-10 02:32:19] 2025-04-10 09:32:01,238 | INFO     | pgrp: 4031623
[2025-04-10 02:32:19] 2025-04-10 09:32:01,254 | INFO     | corecount: 12
[2025-04-10 02:32:19] 2025-04-10 09:32:01,254 | INFO     | event service: False
[2025-04-10 02:32:19] 2025-04-10 09:32:01,254 | INFO     | sizes: {0: 2416479, 1: 2417161, 2: 2417332, 3: 2417360, 4: 2417388, 15: 2417416, 24: 2417778, 26: 2417806, 18250: 2449725, 18256: 2458660, 18258: 2458716, 18294: 2
[2025-04-10 02:32:19] 2025-04-10 09:32:01,254 | INFO     | --------------------------------------------------
[2025-04-10 02:32:19] 2025-04-10 09:32:01,254 | INFO     | 
[2025-04-10 02:32:19] 2025-04-10 09:32:01,254 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-10 02:32:19] 2025-04-10 09:32:01,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-10 02:32:19] 2025-04-10 09:32:01,384 | INFO     | job 6595182099 has completed (purged errors)
[2025-04-10 02:32:19] 2025-04-10 09:32:01,384 | INFO     | overall cleanup function is called
[2025-04-10 02:32:19] 2025-04-10 09:32:02,406 | INFO     | --- collectZombieJob: --- 10, [4031623]
[2025-04-10 02:32:19] 2025-04-10 09:32:02,407 | INFO     | zombie collector waiting for pid 4031623
[2025-04-10 02:32:19] 2025-04-10 09:32:02,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-10 02:32:19] 2025-04-10 09:32:02,407 | INFO     | collected zombie processes
[2025-04-10 02:32:19] 2025-04-10 09:32:02,407 | INFO     | will attempt to kill all subprocesses of pid=4031623
[2025-04-10 02:32:19] 2025-04-10 09:32:03,568 | INFO     | process IDs to be killed: [4031623] (in reverse order)
[2025-04-10 02:32:19] 2025-04-10 09:32:04,145 | WARNING  | found no corresponding commands to process id(s)
[2025-04-10 02:32:19] 2025-04-10 09:32:04,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-10 02:32:19] 2025-04-10 09:32:04,199 | INFO     | did not find any defunct processes belonging to 4031623
[2025-04-10 02:32:19] 2025-04-10 09:32:04,266 | INFO     | did not find any defunct processes belonging to 4031623
[2025-04-10 02:32:19] 2025-04-10 09:32:04,266 | INFO     | ready for new job
[2025-04-10 02:32:19] 2025-04-10 09:32:04,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-10 02:32:19] 2025-04-10 09:32:04,268 | INFO     | **************************************
[2025-04-10 02:32:19] 2025-04-10 09:32:04,268 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-10 02:32:19] 2025-04-10 09:32:04,268 | INFO     | **************************************
[2025-04-10 02:32:19] 2025-04-10 09:32:04,268 | INFO     | 
[2025-04-10 02:32:19] 2025-04-10 09:32:04,270 | INFO     | architecture information:
[2025-04-10 02:32:19] 2025-04-10 09:32:04,275 | INFO     | executing command: cat /etc/os-release
[2025-04-10 02:32:19] 2025-04-10 09:32:04,339 | INFO     | cat /etc/os-release:
[2025-04-10 02:32:19] NAME="CentOS Linux"
[2025-04-10 02:32:19] VERSION="7 (Core)"
[2025-04-10 02:32:19] ID="centos"
[2025-04-10 02:32:19] ID_LIKE="rhel fedora"
[2025-04-10 02:32:19] VERSION_ID="7"
[2025-04-10 02:32:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-10 02:32:19] ANSI_COLOR="0;31"
[2025-04-10 02:32:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-10 02:32:19] HOME_URL="https://www.centos.org/"
[2025-04-10 02:32:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-10 02:32:19] 
[2025-04-10 02:32:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-10 02:32:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-10 02:32:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-10 02:32:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-10 02:32:19] 
[2025-04-10 02:32:19] 2025-04-10 09:32:04,343 | INFO     | **************************************
[2025-04-10 02:32:19] 2025-04-10 09:32:04,847 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-10 02:32:19] 2025-04-10 09:32:04,948 | INFO     | sufficient remaining disk space (1686121742336 B)
[2025-04-10 02:32:19] 2025-04-10 09:32:04,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-10 02:32:19] 2025-04-10 09:32:04,948 | INFO     | current server update state: UPDATING_FINAL
[2025-04-10 02:32:19] 2025-04-10 09:32:04,949 | INFO     | update_server=False
[2025-04-10 02:32:19] 2025-04-10 09:32:04,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-10 02:32:19] 2025-04-10 09:32:04,949 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-10 02:32:19] 2025-04-10 09:32:04,950 | INFO     | found 0 job(s) in 20 queues
[2025-04-10 02:32:19] 2025-04-10 09:32:04,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-10 02:32:19] 2025-04-10 09:32:04,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-10 02:32:19] 2025-04-10 09:32:05,103 | INFO     | all data control threads have been joined
[2025-04-10 02:32:19] 2025-04-10 09:32:05,204 | INFO     | all payload control threads have been joined
[2025-04-10 02:32:19] 2025-04-10 09:32:05,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-10 02:32:19] 2025-04-10 09:32:05,359 | INFO     | aborting loop
[2025-04-10 02:32:19] 2025-04-10 09:32:05,913 | INFO     | all job control threads have been joined
[2025-04-10 02:32:19] 2025-04-10 09:32:05,955 | INFO     | [job] retrieve thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,027 | INFO     | [job] validate thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,037 | INFO     | [data] copytool_in thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,110 | INFO     | [data] control thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,179 | INFO     | [job] create_data_payload thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,203 | INFO     | [payload] validate_pre thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,211 | INFO     | [payload] control thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-10 02:32:19] 2025-04-10 09:32:06,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-10 02:32:19] 2025-04-10 09:32:06,365 | INFO     | [job] job monitor thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,781 | INFO     | [payload] execute_payloads thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,804 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,920 | INFO     | [job] control thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:06,993 | INFO     | [payload] failed_post thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:07,244 | INFO     | [payload] validate_post thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:07,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-10 02:32:19] 2025-04-10 09:32:07,282 | INFO     | [job] queue monitor thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:08,292 | INFO     | [data] copytool_out thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:11,287 | INFO     | [data] queue_monitor thread has finished
[2025-04-10 02:32:19] 2025-04-10 09:32:12,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140581468763968)>', '<ExcThread(monitor, started 140580780762880)>']
[2025-04-10 02:32:19] 2025-04-10 09:32:13,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-10 02:32:19] 2025-04-10 09:32:13,001 | INFO     | [monitor] control thread has ended
[2025-04-10 02:32:19] 2025-04-10 09:32:17,969 | INFO     | all workflow threads have been joined
[2025-04-10 02:32:19] 2025-04-10 09:32:17,970 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-10 02:32:19] 2025-04-10 09:32:17,970 | INFO     | traces error code: 0
[2025-04-10 02:32:19] 2025-04-10 09:32:17,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-10 02:32:19] 2025-04-10 09:32:18,334 [wrapper] ==== pilot stdout END ====
[2025-04-10 02:32:19] 2025-04-10 09:32:18,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-10 02:32:19] 2025-04-10 09:32:18,367 [wrapper] pilotpid: 4024979
[2025-04-10 02:32:19] 2025-04-10 09:32:18,375 [wrapper] Pilot exit status: 0
[2025-04-10 02:32:19] 2025-04-10 09:32:18,458 [wrapper] pandaids: 6595182099
[2025-04-10 02:32:19] 2025-04-10 09:32:18,698 [wrapper] cleanup supervisor_pilot 1853194 4024980
[2025-04-10 02:32:19] 2025-04-10 09:32:18,702 [wrapper] Test setup, not cleaning
[2025-04-10 02:32:19] 2025-04-10 09:32:18,704 [wrapper] apfmon messages muted
[2025-04-10 02:32:19] 2025-04-10 09:32:18,706 [wrapper] ==== wrapper stdout END ====
[2025-04-10 02:32:19] 2025-04-10 09:32:18,708 [wrapper] ==== wrapper stderr END ====
[2025-04-10 02:32:19]  *** Error codes and diagnostics ***
[2025-04-10 02:32:19]     "exeErrorCode": 0,
[2025-04-10 02:32:19]     "exeErrorDiag": "",
[2025-04-10 02:32:19]     "pilotErrorCode": 0,
[2025-04-10 02:32:19]     "pilotErrorDiag": "",
[2025-04-10 02:32:19]  *** Listing of results directory ***
[2025-04-10 02:32:19] total 422328
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc    495897 Apr  9 08:47 pilot3.tar.gz
[2025-04-10 02:32:19] -rwx------. 1 boinc boinc     37140 Apr  9 09:11 runpilot2-wrapper.sh
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc      5111 Apr  9 09:11 queuedata.json
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc       100 Apr  9 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-10 02:32:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr  9 21:25 run_atlas
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc       105 Apr  9 21:25 job.xml
[2025-04-10 02:32:19] -rw-r--r--. 2 boinc boinc 224209220 Apr  9 21:25 EVNT.44075481._000126.pool.root.1
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc      6598 Apr  9 21:25 init_data.xml
[2025-04-10 02:32:19] -rw-r--r--. 2 boinc boinc     17569 Apr  9 21:25 start_atlas.sh
[2025-04-10 02:32:19] drwxrwx--x. 2 boinc boinc      4096 Apr  9 21:25 shared
[2025-04-10 02:32:19] -rw-r--r--. 2 boinc boinc    508888 Apr  9 21:25 input.tar.gz
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc         0 Apr  9 21:25 boinc_lockfile
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc      2573 Apr  9 21:25 pandaJob.out
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc       424 Apr  9 21:25 setup.sh.local
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc    986377 Apr  9 21:26 agis_schedconf.cvmfs.json
[2025-04-10 02:32:19] drwx------. 4 boinc boinc      4096 Apr  9 21:26 pilot3
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc 200780447 Apr 10 02:30 HITS.44075483._003131.pool.root.1
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc       530 Apr 10 02:30 boinc_task_state.xml
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc        95 Apr 10 02:31 pilot_heartbeat.json
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc      1039 Apr 10 02:31 memory_monitor_summary.json
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc   1603528 Apr 10 02:31 agis_ddmendpoints.agis.ALL.json
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc    461100 Apr 10 02:31 log.44075483._003131.job.log.tgz.1
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc      7720 Apr 10 02:32 heartbeat.json
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc        28 Apr 10 02:32 wrapper_checkpoint.txt
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc      8192 Apr 10 02:32 boinc_mmap_file
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc      4475 Apr 10 02:32 pilotlog.txt
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc   1352315 Apr 10 02:32 log.44075483._003131.job.log.1
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc       357 Apr 10 02:32 output.list
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc       620 Apr 10 02:32 runtime_log
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc   1832960 Apr 10 02:32 result.tar.gz
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc       663 Apr 10 02:32 vKkMDmCCnM7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm0ivKDmci88Zm.diag
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc     11145 Apr 10 02:32 runtime_log.err
[2025-04-10 02:32:19] -rw-r--r--. 1 boinc boinc     20798 Apr 10 02:32 stderr.txt
[2025-04-10 02:32:19] HITS file was successfully produced:
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc 200780447 Apr 10 02:30 shared/HITS.pool.root.1
[2025-04-10 02:32:19]  *** Contents of shared directory: ***
[2025-04-10 02:32:19] total 417352
[2025-04-10 02:32:19] -rw-r--r--. 2 boinc boinc 224209220 Apr  9 21:25 ATLAS.root_0
[2025-04-10 02:32:19] -rw-r--r--. 2 boinc boinc     17569 Apr  9 21:25 start_atlas.sh
[2025-04-10 02:32:19] -rw-r--r--. 2 boinc boinc    508888 Apr  9 21:25 input.tar.gz
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc 200780447 Apr 10 02:30 HITS.pool.root.1
[2025-04-10 02:32:19] -rw-------. 1 boinc boinc   1832960 Apr 10 02:32 result.tar.gz
02:32:20 (4019247): run_atlas exited; CPU time 33773.304282
02:32:20 (4019247): called boinc_finish(0)

</stderr_txt>
]]>

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