Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:14:04 (2450940): wrapper (7.7.26015): starting
02:14:04 (2450940): wrapper: running run_atlas (--nthreads 12)
[2025-04-10 02:14:04] Arguments: --nthreads 12
[2025-04-10 02:14:04] Threads: 12
[2025-04-10 02:14:04] Checking for CVMFS
[2025-04-10 02:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-10 02:14:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-10 02:14:04] Running cvmfs_config stat atlas.cern.ch
[2025-04-10 02:14:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-10 02:14:04] 2.12.7.0 65778 17116 107892 144702 1 187 37134551 46080001 922 130560 0 19081532 99.995 2496717 15077 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-10 02:14:04] CVMFS is ok
[2025-04-10 02:14:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-10 02:14:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-10 02:14:04] Further information can be found at the LHC@home message board.
[2025-04-10 02:14:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-10 02:14:04] Checking for apptainer binary...
[2025-04-10 02:14:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-10 02:14:04] Running /usr/bin/apptainer --version
[2025-04-10 02:14:04] apptainer version 1.3.6-1.el9
[2025-04-10 02:14:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-10 02:14:04] minis01.farm.particle.cz
[2025-04-10 02:14:04] apptainer works
[2025-04-10 02:14:04] Set ATHENA_PROC_NUMBER=12
[2025-04-10 02:14:04] Set ATHENA_CORE_NUMBER=12
[2025-04-10 02:14:04] Starting ATLAS job with PandaID=6595004938
[2025-04-10 02:14:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-10 03:16:29]  *** The last 200 lines of the pilot log: ***
[2025-04-10 03:16:29]  lfn=log.44075164._010093.job.log.tgz.1
[2025-04-10 03:16:29]  mtime=0
[2025-04-10 03:16:29]  protocol_id=None
[2025-04-10 03:16:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-10 03:16:29]  replicas=None
[2025-04-10 03:16:29]  scope=mc23_13p6TeV
[2025-04-10 03:16:29]  status=None
[2025-04-10 03:16:29]  status_code=0
[2025-04-10 03:16:29]  storage_token=
[2025-04-10 03:16:29]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6595004938/log.44075164._010093.job.log.tgz.1
[2025-04-10 03:16:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/64/log.44075164._010093.job.log.tgz.1
[2025-04-10 03:16:29]  workdir=None
[2025-04-10 03:16:29] ]
[2025-04-10 03:16:29] 2025-04-10 01:16:08,589 | INFO     | transferring file log.44075164._010093.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6595004938/log.44075164._010093.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-10 03:16:29] 2025-04-10 01:16:08,589 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6595004938/log.44075164._010093.job.log.tgz.1 /scratch/.boinc/slots/1/log.44075164._010093.j
[2025-04-10 03:16:29] 2025-04-10 01:16:08,606 | INFO     | adding to output.list: log.44075164._010093.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/64/log.44075164._010093.job.log.tg
[2025-04-10 03:16:29] 2025-04-10 01:16:08,606 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-10 03:16:29] 2025-04-10 01:16:08,607 | INFO     | summary of transferred files:
[2025-04-10 03:16:29] 2025-04-10 01:16:08,607 | INFO     |  -- lfn=log.44075164._010093.job.log.tgz.1, status_code=0, status=transferred
[2025-04-10 03:16:29] 2025-04-10 01:16:08,607 | INFO     | stage-out finished correctly
[2025-04-10 03:16:29] 2025-04-10 01:16:09,265 | INFO     | PID=2454782 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-10 03:16:29] 2025-04-10 01:16:09,265 | INFO     | .. there are 2 such processes running
[2025-04-10 03:16:29] 2025-04-10 01:16:09,826 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-10 03:16:29] 2025-04-10 01:16:10,941 | WARNING  | process 2461550 can no longer be monitored (due to stat problems) - aborting
[2025-04-10 03:16:29] 2025-04-10 01:16:10,941 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6595004938/memory_monitor_summary.json (trf name=prmon)
[2025-04-10 03:16:29] 2025-04-10 01:16:11,068 | INFO     | number of running child processes to parent process 2461550: 1
[2025-04-10 03:16:29] 2025-04-10 01:16:11,068 | INFO     | maximum number of monitored processes: 6
[2025-04-10 03:16:29] 2025-04-10 01:16:12,448 | INFO     | job 6595004938 has state=finished
[2025-04-10 03:16:29] 2025-04-10 01:16:12,448 | INFO     | preparing for final server update for job 6595004938 in state='finished'
[2025-04-10 03:16:29] 2025-04-10 01:16:12,449 | INFO     | this job has now completed (state=finished)
[2025-04-10 03:16:29] 2025-04-10 01:16:12,449 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-10 03:16:29] 2025-04-10 01:16:12,449 | INFO     | log transfer has been attempted: DONE
[2025-04-10 03:16:29] 2025-04-10 01:16:12,450 | INFO     | job 6595004938 has finished - writing final server update
[2025-04-10 03:16:29] 2025-04-10 01:16:12,450 | INFO     | total number of processed events: 400 (read)
[2025-04-10 03:16:29] 2025-04-10 01:16:12,452 | INFO     | executing command: lscpu
[2025-04-10 03:16:29] 2025-04-10 01:16:12,485 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-10 03:16:29] 2025-04-10 01:16:13,571 | INFO     | monitor loop #282: job 0:6595004938 is in state 'finished'
[2025-04-10 03:16:29] 2025-04-10 01:16:13,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-10 03:16:29] 2025-04-10 01:16:15,960 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-10 03:16:29] 2025-04-10 01:16:15,961 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6595004938/memory_monitor_summary.json (trf name=prmon)
[2025-04-10 03:16:29] 2025-04-10 01:16:15,961 | INFO     | extracted standard info from prmon json
[2025-04-10 03:16:29] 2025-04-10 01:16:15,961 | INFO     | extracted standard memory fields from prmon json
[2025-04-10 03:16:29] 2025-04-10 01:16:15,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-10 03:16:29] 2025-04-10 01:16:15,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-10 03:16:29] 2025-04-10 01:16:15,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-10 03:16:29] 2025-04-10 01:16:15,963 | INFO     | fitting pss+swap vs Time
[2025-04-10 03:16:29] 2025-04-10 01:16:15,963 | INFO     | sum of square deviations: 48810217.5
[2025-04-10 03:16:29] 2025-04-10 01:16:15,963 | INFO     | sum of deviations: 14000896655.999998
[2025-04-10 03:16:29] 2025-04-10 01:16:15,963 | INFO     | mean x: 1744245997.5
[2025-04-10 03:16:29] 2025-04-10 01:16:15,963 | INFO     | mean y: 2659334.4814814813
[2025-04-10 03:16:29] 2025-04-10 01:16:15,963 | INFO     | -- intersect: -500323075817.9819
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | intersect: -500323075817.9819
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | chi2: 1.786999564836797
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | -- intersect: -500323075817.9819
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | current memory leak: 286.84 B/s (using 54 data points, chi2=1.79)
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | ..............................
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | . Timing measurements:
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | . get job = 0 s
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | . initial setup = 1 s
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | . payload setup = 4 s
[2025-04-10 03:16:29] 2025-04-10 01:16:15,964 | INFO     | . stage-in = 0 s
[2025-04-10 03:16:29] 2025-04-10 01:16:15,965 | INFO     | . payload execution = 3692 s
[2025-04-10 03:16:29] 2025-04-10 01:16:15,965 | INFO     | . stage-out = 0 s
[2025-04-10 03:16:29] 2025-04-10 01:16:15,965 | INFO     | . log creation = 0 s
[2025-04-10 03:16:29] 2025-04-10 01:16:15,965 | INFO     | ..............................
[2025-04-10 03:16:29] 2025-04-10 01:16:16,503 | INFO     | 
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | job summary report
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | --------------------------------------------------
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | PanDA job id: 6595004938
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | task id: 44075164
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | errors: (none)
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | pilot state: finished 
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | transexitcode: 0
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | exeerrorcode: 0
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | exeerrordiag: 
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | exitcode: 0
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | exitmsg: OK
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | cpuconsumptiontime: 34545 s
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | nevents: 400
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | neventsw: 0
[2025-04-10 03:16:29] 2025-04-10 01:16:16,504 | INFO     | pid: 2461550
[2025-04-10 03:16:29] 2025-04-10 01:16:16,505 | INFO     | pgrp: 2461550
[2025-04-10 03:16:29] 2025-04-10 01:16:16,505 | INFO     | corecount: 12
[2025-04-10 03:16:29] 2025-04-10 01:16:16,505 | INFO     | event service: False
[2025-04-10 03:16:29] 2025-04-10 01:16:16,505 | INFO     | sizes: {0: 2417155, 1: 2417354, 4: 2417560, 11: 2417588, 3700: 2443282, 3701: 2452225, 3702: 2452409, 3709: 2452579}
[2025-04-10 03:16:29] 2025-04-10 01:16:16,505 | INFO     | --------------------------------------------------
[2025-04-10 03:16:29] 2025-04-10 01:16:16,505 | INFO     | 
[2025-04-10 03:16:29] 2025-04-10 01:16:16,505 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | job 6595004938 has completed (purged errors)
[2025-04-10 03:16:29] 2025-04-10 01:16:16,524 | INFO     | overall cleanup function is called
[2025-04-10 03:16:29] 2025-04-10 01:16:17,532 | INFO     | --- collectZombieJob: --- 10, [2461550]
[2025-04-10 03:16:29] 2025-04-10 01:16:17,532 | INFO     | zombie collector waiting for pid 2461550
[2025-04-10 03:16:29] 2025-04-10 01:16:17,532 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-10 03:16:29] 2025-04-10 01:16:17,532 | INFO     | collected zombie processes
[2025-04-10 03:16:29] 2025-04-10 01:16:17,532 | INFO     | will attempt to kill all subprocesses of pid=2461550
[2025-04-10 03:16:29] 2025-04-10 01:16:17,662 | INFO     | process IDs to be killed: [2461550] (in reverse order)
[2025-04-10 03:16:29] 2025-04-10 01:16:17,709 | WARNING  | found no corresponding commands to process id(s)
[2025-04-10 03:16:29] 2025-04-10 01:16:17,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-10 03:16:29] 2025-04-10 01:16:17,714 | INFO     | did not find any defunct processes belonging to 2461550
[2025-04-10 03:16:29] 2025-04-10 01:16:17,718 | INFO     | did not find any defunct processes belonging to 2461550
[2025-04-10 03:16:29] 2025-04-10 01:16:17,718 | INFO     | ready for new job
[2025-04-10 03:16:29] 2025-04-10 01:16:17,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-10 03:16:29] 2025-04-10 01:16:17,719 | INFO     | **************************************
[2025-04-10 03:16:29] 2025-04-10 01:16:17,719 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-10 03:16:29] 2025-04-10 01:16:17,719 | INFO     | **************************************
[2025-04-10 03:16:29] 2025-04-10 01:16:17,719 | INFO     | 
[2025-04-10 03:16:29] 2025-04-10 01:16:17,721 | INFO     | architecture information:
[2025-04-10 03:16:29] 2025-04-10 01:16:17,721 | INFO     | executing command: cat /etc/os-release
[2025-04-10 03:16:29] 2025-04-10 01:16:17,734 | INFO     | cat /etc/os-release:
[2025-04-10 03:16:29] NAME="CentOS Linux"
[2025-04-10 03:16:29] VERSION="7 (Core)"
[2025-04-10 03:16:29] ID="centos"
[2025-04-10 03:16:29] ID_LIKE="rhel fedora"
[2025-04-10 03:16:29] VERSION_ID="7"
[2025-04-10 03:16:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-10 03:16:29] ANSI_COLOR="0;31"
[2025-04-10 03:16:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-10 03:16:29] HOME_URL="https://www.centos.org/"
[2025-04-10 03:16:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-10 03:16:29] 
[2025-04-10 03:16:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-10 03:16:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-10 03:16:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-10 03:16:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-10 03:16:29] 
[2025-04-10 03:16:29] 2025-04-10 01:16:17,735 | INFO     | **************************************
[2025-04-10 03:16:29] 2025-04-10 01:16:18,238 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-04-10 03:16:29] 2025-04-10 01:16:18,251 | INFO     | sufficient remaining disk space (707478421504 B)
[2025-04-10 03:16:29] 2025-04-10 01:16:18,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-10 03:16:29] 2025-04-10 01:16:18,252 | INFO     | current server update state: UPDATING_FINAL
[2025-04-10 03:16:29] 2025-04-10 01:16:18,252 | INFO     | update_server=False
[2025-04-10 03:16:29] 2025-04-10 01:16:18,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-10 03:16:29] 2025-04-10 01:16:18,252 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-10 03:16:29] 2025-04-10 01:16:18,253 | INFO     | found 0 job(s) in 20 queues
[2025-04-10 03:16:29] 2025-04-10 01:16:18,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-10 03:16:29] 2025-04-10 01:16:18,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-10 03:16:29] 2025-04-10 01:16:18,429 | INFO     | all data control threads have been joined
[2025-04-10 03:16:29] 2025-04-10 01:16:18,577 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-10 03:16:29] 2025-04-10 01:16:18,577 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-10 03:16:29] 2025-04-10 01:16:18,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-10 03:16:29] 2025-04-10 01:16:18,577 | INFO     | will abort loop
[2025-04-10 03:16:29] 2025-04-10 01:16:18,700 | INFO     | all payload control threads have been joined
[2025-04-10 03:16:29] 2025-04-10 01:16:19,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-10 03:16:29] 2025-04-10 01:16:19,257 | INFO     | [job] retrieve thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:19,286 | INFO     | [job] create_data_payload thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:19,309 | INFO     | [payload] validate_pre thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:19,434 | INFO     | [data] control thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:19,582 | INFO     | [job] job monitor thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:19,638 | INFO     | all job control threads have been joined
[2025-04-10 03:16:29] 2025-04-10 01:16:19,705 | INFO     | [payload] control thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:19,973 | INFO     | [payload] validate_post thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:20,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:20,099 | INFO     | [data] copytool_in thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:20,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-10 03:16:29] 2025-04-10 01:16:20,564 | INFO     | [job] validate thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:20,643 | INFO     | [job] control thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:20,644 | INFO     | [payload] execute_payloads thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:20,720 | INFO     | [payload] failed_post thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:21,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-10 03:16:29] 2025-04-10 01:16:21,199 | INFO     | [data] copytool_out thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:22,055 | INFO     | [job] queue monitor thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:24,409 | INFO     | [data] queue_monitor thread has finished
[2025-04-10 03:16:29] 2025-04-10 01:16:24,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217091585856)>', '<ExcThread(monitor, started 140216379631360)>']
[2025-04-10 03:16:29] 2025-04-10 01:16:25,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-10 03:16:29] 2025-04-10 01:16:25,288 | INFO     | [monitor] control thread has ended
[2025-04-10 03:16:29] 2025-04-10 01:16:29,730 | INFO     | all workflow threads have been joined
[2025-04-10 03:16:29] 2025-04-10 01:16:29,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-10 03:16:29] 2025-04-10 01:16:29,730 | INFO     | traces error code: 0
[2025-04-10 03:16:29] 2025-04-10 01:16:29,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-10 03:16:29] 2025-04-10 01:16:29,823 [wrapper] ==== pilot stdout END ====
[2025-04-10 03:16:29] 2025-04-10 01:16:29,826 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-10 03:16:29] 2025-04-10 01:16:29,828 [wrapper] pilotpid: 2454782
[2025-04-10 03:16:29] 2025-04-10 01:16:29,831 [wrapper] Pilot exit status: 0
[2025-04-10 03:16:29] 2025-04-10 01:16:29,840 [wrapper] pandaids: 6595004938
[2025-04-10 03:16:29] 2025-04-10 01:16:29,874 [wrapper] cleanup supervisor_pilot 2520693 2454783
[2025-04-10 03:16:29] 2025-04-10 01:16:29,877 [wrapper] Test setup, not cleaning
[2025-04-10 03:16:29] 2025-04-10 01:16:29,879 [wrapper] apfmon messages muted
[2025-04-10 03:16:29] 2025-04-10 01:16:29,882 [wrapper] ==== wrapper stdout END ====
[2025-04-10 03:16:29] 2025-04-10 01:16:29,884 [wrapper] ==== wrapper stderr END ====
[2025-04-10 03:16:29]  *** Error codes and diagnostics ***
[2025-04-10 03:16:29]     "exeErrorCode": 0,
[2025-04-10 03:16:29]     "exeErrorDiag": "",
[2025-04-10 03:16:29]     "pilotErrorCode": 0,
[2025-04-10 03:16:29]     "pilotErrorDiag": "",
[2025-04-10 03:16:29]  *** Listing of results directory ***
[2025-04-10 03:16:29] total 421520
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc    495897 Apr  9 02:43 pilot3.tar.gz
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc      5111 Apr  9 03:08 queuedata.json
[2025-04-10 03:16:29] -rwx------ 1 boinc boinc     37140 Apr  9 03:10 runpilot2-wrapper.sh
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc       100 Apr 10 02:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-10 03:16:29] -rwxr-xr-x 1 boinc boinc      7986 Apr 10 02:14 run_atlas
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc       105 Apr 10 02:14 job.xml
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc      6524 Apr 10 02:14 init_data.xml
[2025-04-10 03:16:29] -rw-r--r-- 2 boinc boinc 222253202 Apr 10 02:14 EVNT.44075162._000404.pool.root.1
[2025-04-10 03:16:29] -rw-r--r-- 2 boinc boinc     17569 Apr 10 02:14 start_atlas.sh
[2025-04-10 03:16:29] drwxrwx--x 2 boinc boinc      4096 Apr 10 02:14 shared
[2025-04-10 03:16:29] -rw-r--r-- 2 boinc boinc    508876 Apr 10 02:14 input.tar.gz
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc         0 Apr 10 02:14 boinc_lockfile
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc      2549 Apr 10 02:14 pandaJob.out
[2025-04-10 03:16:29] -rw------- 1 boinc boinc       424 Apr 10 02:14 setup.sh.local
[2025-04-10 03:16:29] -rw------- 1 boinc boinc    986303 Apr 10 02:14 agis_schedconf.cvmfs.json
[2025-04-10 03:16:29] -rw------- 1 boinc boinc   1603528 Apr 10 02:14 agis_ddmendpoints.agis.ALL.json
[2025-04-10 03:16:29] drwx------ 4 boinc boinc      4096 Apr 10 02:14 pilot3
[2025-04-10 03:16:29] -rw------- 1 boinc boinc 204049192 Apr 10 03:15 HITS.44075164._010093.pool.root.1
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc       529 Apr 10 03:15 boinc_task_state.xml
[2025-04-10 03:16:29] -rw------- 1 boinc boinc        95 Apr 10 03:15 pilot_heartbeat.json
[2025-04-10 03:16:29] -rw------- 1 boinc boinc      1016 Apr 10 03:16 memory_monitor_summary.json
[2025-04-10 03:16:29] -rw------- 1 boinc boinc    360292 Apr 10 03:16 log.44075164._010093.job.log.tgz.1
[2025-04-10 03:16:29] -rw------- 1 boinc boinc      7689 Apr 10 03:16 heartbeat.json
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc      8192 Apr 10 03:16 boinc_mmap_file
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc        27 Apr 10 03:16 wrapper_checkpoint.txt
[2025-04-10 03:16:29] -rw------- 1 boinc boinc      4664 Apr 10 03:16 pilotlog.txt
[2025-04-10 03:16:29] -rw------- 1 boinc boinc    383967 Apr 10 03:16 log.44075164._010093.job.log.1
[2025-04-10 03:16:29] -rw------- 1 boinc boinc       357 Apr 10 03:16 output.list
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc       620 Apr 10 03:16 runtime_log
[2025-04-10 03:16:29] -rw------- 1 boinc boinc    768000 Apr 10 03:16 result.tar.gz
[2025-04-10 03:16:29] -rw------- 1 boinc boinc       661 Apr 10 03:16 sQpKDmV8YM7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmvuuKDm5VCcOo.diag
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc     11078 Apr 10 03:16 runtime_log.err
[2025-04-10 03:16:29] -rw-r--r-- 1 boinc boinc     21705 Apr 10 03:16 stderr.txt
[2025-04-10 03:16:29] HITS file was successfully produced:
[2025-04-10 03:16:29] -rw------- 1 boinc boinc 204049192 Apr 10 03:15 shared/HITS.pool.root.1
[2025-04-10 03:16:29]  *** Contents of shared directory: ***
[2025-04-10 03:16:29] total 417592
[2025-04-10 03:16:29] -rw-r--r-- 2 boinc boinc 222253202 Apr 10 02:14 ATLAS.root_0
[2025-04-10 03:16:29] -rw-r--r-- 2 boinc boinc     17569 Apr 10 02:14 start_atlas.sh
[2025-04-10 03:16:29] -rw-r--r-- 2 boinc boinc    508876 Apr 10 02:14 input.tar.gz
[2025-04-10 03:16:29] -rw------- 1 boinc boinc 204049192 Apr 10 03:15 HITS.pool.root.1
[2025-04-10 03:16:29] -rw------- 1 boinc boinc    768000 Apr 10 03:16 result.tar.gz
03:16:31 (2450940): run_atlas exited; CPU time 34570.700040
03:16:31 (2450940): called boinc_finish(0)

</stderr_txt>
]]>

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