Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:53:19 (408173): wrapper (7.7.26015): starting
09:53:19 (408173): wrapper: running run_atlas (--nthreads 9)
[2025-04-07 09:53:19] Arguments: --nthreads 9
[2025-04-07 09:53:19] Threads: 9
[2025-04-07 09:53:19] Checking for CVMFS
[2025-04-07 09:53:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-07 09:53:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-07 09:53:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-07 09:53:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-07 09:53:22] 2.12.6.0 1724982 195639 468548 144602 1 170 22481270 32935936 16905 130560 0 30740064 99.762 20666404 26111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-07 09:53:22] CVMFS is ok
[2025-04-07 09:53:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-07 09:53:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-07 09:53:22] Further information can be found at the LHC@home message board.
[2025-04-07 09:53:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-07 09:53:22] Checking for apptainer binary...
[2025-04-07 09:53:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-07 09:53:22] Running /usr/bin/apptainer --version
[2025-04-07 09:53:23] apptainer version 1.4.0-1.el9
[2025-04-07 09:53:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-07 09:53:24] c6-2-29-1.aglt2.org
[2025-04-07 09:53:24] apptainer works
[2025-04-07 09:53:25] Set ATHENA_PROC_NUMBER=9
[2025-04-07 09:53:25] Set ATHENA_CORE_NUMBER=9
[2025-04-07 09:53:25] Starting ATLAS job with PandaID=6592839251
[2025-04-07 09:53:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-07 17:30:57]  *** The last 200 lines of the pilot log: ***
[2025-04-07 17:30:57] 2025-04-07 21:30:33,165 | INFO     | monitor loop #1692: job 0:6592839251 is in state 'finished'
[2025-04-07 17:30:57] 2025-04-07 21:30:33,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 17:30:57] 2025-04-07 21:30:35,670 | INFO     | monitor loop #1693: job 0:6592839251 is in state 'finished'
[2025-04-07 17:30:57] 2025-04-07 21:30:35,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 17:30:57] 2025-04-07 21:30:38,175 | INFO     | monitor loop #1694: job 0:6592839251 is in state 'finished'
[2025-04-07 17:30:57] 2025-04-07 21:30:38,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 17:30:57] 2025-04-07 21:30:40,696 | INFO     | monitor loop #1695: job 0:6592839251 is in state 'finished'
[2025-04-07 17:30:57] 2025-04-07 21:30:40,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 17:30:57] 2025-04-07 21:30:40,887 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-07 17:30:57] 2025-04-07 21:30:40,888 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6592839251/memory_monitor_summary.json (trf name=prmon)
[2025-04-07 17:30:57] 2025-04-07 21:30:40,888 | INFO     | extracted standard info from prmon json
[2025-04-07 17:30:57] 2025-04-07 21:30:40,889 | INFO     | extracted standard memory fields from prmon json
[2025-04-07 17:30:57] 2025-04-07 21:30:40,889 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-07 17:30:57] 2025-04-07 21:30:40,905 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-07 17:30:57] 2025-04-07 21:30:40,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-07 17:30:57] 2025-04-07 21:30:40,974 | INFO     | fitting pss+swap vs Time
[2025-04-07 17:30:57] 2025-04-07 21:30:40,979 | INFO     | sum of square deviations: 27326204475.67163
[2025-04-07 17:30:57] 2025-04-07 21:30:41,003 | INFO     | sum of deviations: 366821098576.8742
[2025-04-07 17:30:57] 2025-04-07 21:30:41,007 | INFO     | mean x: 1744047817.8404493
[2025-04-07 17:30:57] 2025-04-07 21:30:41,007 | INFO     | mean y: 2178349.8292134833
[2025-04-07 17:30:57] 2025-04-07 21:30:41,008 | INFO     | -- intersect: -23409544894.80957
[2025-04-07 17:30:57] 2025-04-07 21:30:41,008 | INFO     | intersect: -23409544894.80957
[2025-04-07 17:30:57] 2025-04-07 21:30:41,013 | INFO     | chi2: 13.579171893195717
[2025-04-07 17:30:57] 2025-04-07 21:30:41,014 | INFO     | sum of square deviations: 26415566582.099987
[2025-04-07 17:30:57] 2025-04-07 21:30:41,038 | INFO     | sum of deviations: 490410877585.25037
[2025-04-07 17:30:57] 2025-04-07 21:30:41,043 | INFO     | mean x: 1744047665.35
[2025-04-07 17:30:57] 2025-04-07 21:30:41,044 | INFO     | mean y: 2199050.284090909
[2025-04-07 17:30:57] 2025-04-07 21:30:41,044 | INFO     | -- intersect: -32376434338.347385
[2025-04-07 17:30:57] 2025-04-07 21:30:41,044 | INFO     | intersect: -32376434338.347385
[2025-04-07 17:30:57] 2025-04-07 21:30:41,044 | INFO     | chi2: 9.964919957849855
[2025-04-07 17:30:57] 2025-04-07 21:30:41,044 | INFO     | current chi2=9.964919957849855 (change=26.61614392816472 %)
[2025-04-07 17:30:57] 2025-04-07 21:30:41,045 | INFO     | sum of square deviations: 25525340631.8758
[2025-04-07 17:30:57] 2025-04-07 21:30:41,074 | INFO     | sum of deviations: 497087832681.2966
[2025-04-07 17:30:57] 2025-04-07 21:30:41,074 | INFO     | mean x: 1744047512.8551724
[2025-04-07 17:30:57] 2025-04-07 21:30:41,074 | INFO     | mean y: 2200194.1793103446
[2025-04-07 17:30:57] 2025-04-07 21:30:41,074 | INFO     | -- intersect: -33961883214.594128
[2025-04-07 17:30:57] 2025-04-07 21:30:41,074 | INFO     | intersect: -33961883214.594128
[2025-04-07 17:30:57] 2025-04-07 21:30:41,075 | INFO     | chi2: 9.878223295508182
[2025-04-07 17:30:57] 2025-04-07 21:30:41,075 | INFO     | current chi2=9.878223295508182 (change=0.8700186525169 %)
[2025-04-07 17:30:57] 2025-04-07 21:30:41,075 | INFO     | right removable region: 434
[2025-04-07 17:30:57] 2025-04-07 21:30:41,076 | INFO     | sum of square deviations: 26415365343.797623
[2025-04-07 17:30:57] 2025-04-07 21:30:41,111 | INFO     | sum of deviations: 251827046200.84808
[2025-04-07 17:30:57] 2025-04-07 21:30:41,115 | INFO     | mean x: 1744047970.3477273
[2025-04-07 17:30:57] 2025-04-07 21:30:41,115 | INFO     | mean y: 2197583.4977272726
[2025-04-07 17:30:57] 2025-04-07 21:30:41,116 | INFO     | -- intersect: -16624430255.604906
[2025-04-07 17:30:57] 2025-04-07 21:30:41,116 | INFO     | intersect: -16624430255.604906
[2025-04-07 17:30:57] 2025-04-07 21:30:41,121 | INFO     | chi2: 10.294152512539041
[2025-04-07 17:30:57] 2025-04-07 21:30:41,122 | INFO     | current chi2=10.294152512539041 (change=24.19160318828235 %)
[2025-04-07 17:30:57] 2025-04-07 21:30:41,122 | INFO     | left removable region: 10
[2025-04-07 17:30:57] 2025-04-07 21:30:41,122 | INFO     | sum of square deviations: 23637477672.865536
[2025-04-07 17:30:57] 2025-04-07 21:30:41,147 | INFO     | sum of deviations: 304700992168.36316
[2025-04-07 17:30:57] 2025-04-07 21:30:41,155 | INFO     | mean x: 1744047787.3702831
[2025-04-07 17:30:57] 2025-04-07 21:30:41,156 | INFO     | mean y: 2234318.8066037735
[2025-04-07 17:30:57] 2025-04-07 21:30:41,156 | INFO     | -- intersect: -22479567612.65732
[2025-04-07 17:30:57] 2025-04-07 21:30:41,156 | INFO     | intersect: -22479567612.65732
[2025-04-07 17:30:57] 2025-04-07 21:30:41,156 | INFO     | chi2: 5.11202971596236
[2025-04-07 17:30:57] 2025-04-07 21:30:41,156 | INFO     | -- intersect: -22479567612.65732
[2025-04-07 17:30:57] 2025-04-07 21:30:41,157 | INFO     | current memory leak: 12.89 B/s (using 424 data points, chi2=5.11)
[2025-04-07 17:30:57] 2025-04-07 21:30:41,157 | INFO     | ..............................
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | . Timing measurements:
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | . get job = 1 s
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | . initial setup = 8 s
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | . payload setup = 57 s
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | . stage-in = 0 s
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | . payload execution = 27150 s
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | . stage-out = 10 s
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | . log creation = 1 s
[2025-04-07 17:30:57] 2025-04-07 21:30:41,158 | INFO     | ..............................
[2025-04-07 17:30:57] 2025-04-07 21:30:41,765 | INFO     | 
[2025-04-07 17:30:57] 2025-04-07 21:30:41,765 | INFO     | job summary report
[2025-04-07 17:30:57] 2025-04-07 21:30:41,765 | INFO     | --------------------------------------------------
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | PanDA job id: 6592839251
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | task id: 43881008
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | errors: (none)
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | pilot state: finished 
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | transexitcode: 0
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | exeerrorcode: 0
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | exeerrordiag: 
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | exitcode: 0
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | exitmsg: OK
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | cpuconsumptiontime: 51952 s
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | nevents: 400
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | neventsw: 0
[2025-04-07 17:30:57] 2025-04-07 21:30:41,766 | INFO     | pid: 432440
[2025-04-07 17:30:57] 2025-04-07 21:30:41,767 | INFO     | pgrp: 432440
[2025-04-07 17:30:57] 2025-04-07 21:30:41,767 | INFO     | corecount: 9
[2025-04-07 17:30:57] 2025-04-07 21:30:41,767 | INFO     | event service: False
[2025-04-07 17:30:57] 2025-04-07 21:30:41,767 | INFO     | sizes: {0: 2416532, 1: 2417217, 3: 2417217, 4: 2417416, 5: 2417500, 16: 2417500, 27: 2417656, 39: 2417684, 42: 2417918, 50: 2417974, 27212: 2453952, 27213: 2454231
[2025-04-07 17:30:57] 2025-04-07 21:30:41,767 | INFO     | --------------------------------------------------
[2025-04-07 17:30:57] 2025-04-07 21:30:41,767 | INFO     | 
[2025-04-07 17:30:57] 2025-04-07 21:30:41,767 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-07 17:30:57] 2025-04-07 21:30:41,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,841 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,841 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,842 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,844 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-07 17:30:57] 2025-04-07 21:30:41,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-07 17:30:57] 2025-04-07 21:30:41,845 | INFO     | job 6592839251 has completed (purged errors)
[2025-04-07 17:30:57] 2025-04-07 21:30:41,845 | INFO     | overall cleanup function is called
[2025-04-07 17:30:57] 2025-04-07 21:30:42,854 | INFO     | --- collectZombieJob: --- 10, [432440]
[2025-04-07 17:30:57] 2025-04-07 21:30:42,854 | INFO     | zombie collector waiting for pid 432440
[2025-04-07 17:30:57] 2025-04-07 21:30:42,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-07 17:30:57] 2025-04-07 21:30:42,855 | INFO     | collected zombie processes
[2025-04-07 17:30:57] 2025-04-07 21:30:42,855 | INFO     | will attempt to kill all subprocesses of pid=432440
[2025-04-07 17:30:57] 2025-04-07 21:30:44,672 | INFO     | process IDs to be killed: [432440] (in reverse order)
[2025-04-07 17:30:57] 2025-04-07 21:30:45,242 | WARNING  | found no corresponding commands to process id(s)
[2025-04-07 17:30:57] 2025-04-07 21:30:45,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-07 17:30:57] 2025-04-07 21:30:45,268 | INFO     | did not find any defunct processes belonging to 432440
[2025-04-07 17:30:57] 2025-04-07 21:30:45,349 | INFO     | did not find any defunct processes belonging to 432440
[2025-04-07 17:30:57] 2025-04-07 21:30:45,349 | INFO     | ready for new job
[2025-04-07 17:30:57] 2025-04-07 21:30:45,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-07 17:30:57] 2025-04-07 21:30:45,355 | INFO     | **************************************
[2025-04-07 17:30:57] 2025-04-07 21:30:45,356 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-07 17:30:57] 2025-04-07 21:30:45,356 | INFO     | **************************************
[2025-04-07 17:30:57] 2025-04-07 21:30:45,356 | INFO     | 
[2025-04-07 17:30:57] 2025-04-07 21:30:45,362 | INFO     | architecture information:
[2025-04-07 17:30:57] 2025-04-07 21:30:45,366 | INFO     | executing command: cat /etc/os-release
[2025-04-07 17:30:57] 2025-04-07 21:30:45,407 | INFO     | cat /etc/os-release:
[2025-04-07 17:30:57] NAME="CentOS Linux"
[2025-04-07 17:30:57] VERSION="7 (Core)"
[2025-04-07 17:30:57] ID="centos"
[2025-04-07 17:30:57] ID_LIKE="rhel fedora"
[2025-04-07 17:30:57] VERSION_ID="7"
[2025-04-07 17:30:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-07 17:30:57] ANSI_COLOR="0;31"
[2025-04-07 17:30:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-07 17:30:57] HOME_URL="https://www.centos.org/"
[2025-04-07 17:30:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-07 17:30:57] 
[2025-04-07 17:30:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-07 17:30:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-07 17:30:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-07 17:30:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-07 17:30:57] 
[2025-04-07 17:30:57] 2025-04-07 21:30:45,408 | INFO     | **************************************
[2025-04-07 17:30:57] 2025-04-07 21:30:45,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-07 17:30:57] 2025-04-07 21:30:45,956 | INFO     | sufficient remaining disk space (74047291392 B)
[2025-04-07 17:30:57] 2025-04-07 21:30:45,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-07 17:30:57] 2025-04-07 21:30:45,956 | INFO     | current server update state: UPDATING_FINAL
[2025-04-07 17:30:57] 2025-04-07 21:30:45,956 | INFO     | update_server=False
[2025-04-07 17:30:57] 2025-04-07 21:30:45,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-07 17:30:57] 2025-04-07 21:30:45,962 | INFO     | all job control threads have been joined
[2025-04-07 17:30:57] 2025-04-07 21:30:46,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-07 17:30:57] 2025-04-07 21:30:46,447 | INFO     | found 0 job(s) in 20 queues
[2025-04-07 17:30:57] 2025-04-07 21:30:46,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-07 17:30:57] 2025-04-07 21:30:46,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-07 17:30:57] 2025-04-07 21:30:46,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-07 17:30:57] 2025-04-07 21:30:46,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-07 17:30:57] 2025-04-07 21:30:46,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-07 17:30:57] 2025-04-07 21:30:46,840 | INFO     | aborting loop
[2025-04-07 17:30:57] 2025-04-07 21:30:46,965 | INFO     | [job] retrieve thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:46,967 | INFO     | [job] control thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,078 | INFO     | all data control threads have been joined
[2025-04-07 17:30:57] 2025-04-07 21:30:47,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,100 | INFO     | [payload] execute_payloads thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,133 | INFO     | all payload control threads have been joined
[2025-04-07 17:30:57] 2025-04-07 21:30:47,231 | INFO     | [job] create_data_payload thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,370 | INFO     | [payload] validate_pre thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,588 | INFO     | [payload] failed_post thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,828 | INFO     | [job] queue monitor thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,846 | INFO     | [job] job monitor thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,987 | INFO     | [data] copytool_in thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:47,988 | INFO     | [job] validate thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:48,084 | INFO     | [data] control thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:48,139 | INFO     | [payload] control thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:48,195 | INFO     | [data] copytool_out thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:48,463 | INFO     | [payload] validate_post thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:50,625 | INFO     | [data] queue_monitor thread has finished
[2025-04-07 17:30:57] 2025-04-07 21:30:50,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661574723392)>', '<ExcThread(monitor, started 140661076502272)>']
[2025-04-07 17:30:57] 2025-04-07 21:30:51,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-07 17:30:57] 2025-04-07 21:30:51,477 | INFO     | [monitor] control thread has ended
[2025-04-07 17:30:57] 2025-04-07 21:30:55,804 | INFO     | all workflow threads have been joined
[2025-04-07 17:30:57] 2025-04-07 21:30:55,805 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-07 17:30:57] 2025-04-07 21:30:55,805 | INFO     | traces error code: 0
[2025-04-07 17:30:57] 2025-04-07 21:30:55,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-07 17:30:57] 2025-04-07 21:30:56,598 [wrapper] ==== pilot stdout END ====
[2025-04-07 17:30:57] 2025-04-07 21:30:56,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-07 17:30:57] 2025-04-07 21:30:56,700 [wrapper] pilotpid: 414308
[2025-04-07 17:30:57] 2025-04-07 21:30:56,732 [wrapper] Pilot exit status: 0
[2025-04-07 17:30:57] 2025-04-07 21:30:56,937 [wrapper] pandaids: 6592839251
[2025-04-07 17:30:57] 2025-04-07 21:30:57,070 [wrapper] cleanup supervisor_pilot 2264171 414309
[2025-04-07 17:30:57] 2025-04-07 21:30:57,074 [wrapper] Test setup, not cleaning
[2025-04-07 17:30:57] 2025-04-07 21:30:57,084 [wrapper] apfmon messages muted
[2025-04-07 17:30:57] 2025-04-07 21:30:57,130 [wrapper] ==== wrapper stdout END ====
[2025-04-07 17:30:57] 2025-04-07 21:30:57,147 [wrapper] ==== wrapper stderr END ====
[2025-04-07 17:30:57]  *** Error codes and diagnostics ***
[2025-04-07 17:30:57]     "exeErrorCode": 0,
[2025-04-07 17:30:57]     "exeErrorDiag": "",
[2025-04-07 17:30:57]     "pilotErrorCode": 0,
[2025-04-07 17:30:57]     "pilotErrorDiag": "",
[2025-04-07 17:30:57]  *** Listing of results directory ***
[2025-04-07 17:30:57] total 580488
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas    495897 Apr  7 07:47 pilot3.tar.gz
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas      5111 Apr  7 08:08 queuedata.json
[2025-04-07 17:30:57] -rwx------. 1 boincer umatlas     37140 Apr  7 08:11 runpilot2-wrapper.sh
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas       100 Apr  7 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-07 17:30:57] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  7 09:53 run_atlas
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas       105 Apr  7 09:53 job.xml
[2025-04-07 17:30:57] -rw-r--r--. 2 boincer umatlas 343952499 Apr  7 09:53 EVNT.43881005._000001.pool.root.1
[2025-04-07 17:30:57] -rw-r--r--. 2 boincer umatlas    508871 Apr  7 09:53 input.tar.gz
[2025-04-07 17:30:57] -rw-r--r--. 2 boincer umatlas     17569 Apr  7 09:53 start_atlas.sh
[2025-04-07 17:30:57] drwxrwx--x. 2 boincer umatlas      4096 Apr  7 09:53 shared
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas         0 Apr  7 09:53 boinc_lockfile
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas      2575 Apr  7 09:53 pandaJob.out
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas       467 Apr  7 09:53 setup.sh.local
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas    983715 Apr  7 09:54 agis_schedconf.cvmfs.json
[2025-04-07 17:30:57] drwx------. 4 boincer umatlas      4096 Apr  7 09:54 pilot3
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas 241117453 Apr  7 17:24 HITS.43881008._000013.pool.root.1
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas       531 Apr  7 17:25 boinc_task_state.xml
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas      6840 Apr  7 17:28 init_data.xml
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas      1053 Apr  7 17:29 memory_monitor_summary.json
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas   1603526 Apr  7 17:30 agis_ddmendpoints.agis.ALL.json
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas    563125 Apr  7 17:30 log.43881008._000013.job.log.tgz.1
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas        95 Apr  7 17:30 pilot_heartbeat.json
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas      7732 Apr  7 17:30 heartbeat.json
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas      8192 Apr  7 17:30 boinc_mmap_file
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas      4353 Apr  7 17:30 pilotlog.txt
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas        28 Apr  7 17:30 wrapper_checkpoint.txt
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas   2190401 Apr  7 17:30 log.43881008._000013.job.log.1
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas       357 Apr  7 17:30 output.list
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas       620 Apr  7 17:30 runtime_log
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas   2775040 Apr  7 17:30 result.tar.gz
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas     11424 Apr  7 17:30 runtime_log.err
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas       663 Apr  7 17:30 btfKDmBV0L7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvBJLDms8NqQm.diag
[2025-04-07 17:30:57] -rw-r--r--. 1 boincer umatlas     21205 Apr  7 17:30 stderr.txt
[2025-04-07 17:30:57] HITS file was successfully produced:
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas 241117453 Apr  7 17:24 shared/HITS.pool.root.1
[2025-04-07 17:30:57]  *** Contents of shared directory: ***
[2025-04-07 17:30:57] total 574596
[2025-04-07 17:30:57] -rw-r--r--. 2 boincer umatlas 343952499 Apr  7 09:53 ATLAS.root_0
[2025-04-07 17:30:57] -rw-r--r--. 2 boincer umatlas    508871 Apr  7 09:53 input.tar.gz
[2025-04-07 17:30:57] -rw-r--r--. 2 boincer umatlas     17569 Apr  7 09:53 start_atlas.sh
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas 241117453 Apr  7 17:24 HITS.pool.root.1
[2025-04-07 17:30:57] -rw-------. 1 boincer umatlas   2775040 Apr  7 17:30 result.tar.gz
17:30:59 (408173): run_atlas exited; CPU time 52764.175967
17:30:59 (408173): called boinc_finish(0)

</stderr_txt>
]]>

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