Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:52:40 (6333): wrapper (7.7.26015): starting
13:52:40 (6333): wrapper: running run_atlas (--nthreads 4)
[2025-04-07 13:52:40] Arguments: --nthreads 4
[2025-04-07 13:52:40] Threads: 4
[2025-04-07 13:52:40] Checking for CVMFS
[2025-04-07 13:52:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-07 13:52:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-07 13:52:49] Running cvmfs_config stat atlas.cern.ch
[2025-04-07 13:52:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-07 13:52:49] 2.12.7.0 6550 0 25000 144598 3 1 2407444 4194305 0 130560 0 0 0.000 1171 271 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-07 13:52:49] CVMFS is ok
[2025-04-07 13:52:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-07 13:52:49] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-07 13:52:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-07 13:52:49] Further information can be found at the LHC@home message board.
[2025-04-07 13:52:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-07 13:52:49] Checking for apptainer binary...
[2025-04-07 13:52:49] apptainer is not installed, using version from CVMFS
[2025-04-07 13:52:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-07 13:55:47] Ryze
[2025-04-07 13:55:47] apptainer works
[2025-04-07 13:55:47] Set ATHENA_PROC_NUMBER=4
[2025-04-07 13:55:47] Set ATHENA_CORE_NUMBER=4
[2025-04-07 13:55:47] Starting ATLAS job with PandaID=6592811147
[2025-04-07 13:55:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:51:05 (26425): wrapper (7.7.26015): starting
14:51:05 (26425): wrapper: running run_atlas (--nthreads 4)
[2025-04-07 14:51:05] Arguments: --nthreads 4
[2025-04-07 14:51:05] Threads: 4
[2025-04-07 14:51:05] This job has been restarted, cleaning up previous attempt
[2025-04-07 14:51:05] Checking for CVMFS
[2025-04-07 14:51:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-07 14:51:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-07 14:51:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-07 14:51:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-07 14:51:10] 2.12.7.0 26564 0 25096 144600 3 1 3111843 4194305 0 130560 0 0 100.000 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-07 14:51:10] CVMFS is ok
[2025-04-07 14:51:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-07 14:51:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-07 14:51:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-07 14:51:10] Further information can be found at the LHC@home message board.
[2025-04-07 14:51:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-07 14:51:10] Checking for apptainer binary...
[2025-04-07 14:51:10] apptainer is not installed, using version from CVMFS
[2025-04-07 14:51:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-07 14:51:10] Ryze
[2025-04-07 14:51:10] apptainer works
[2025-04-07 14:51:10] Set ATHENA_PROC_NUMBER=4
[2025-04-07 14:51:10] Set ATHENA_CORE_NUMBER=4
[2025-04-07 14:51:10] Starting ATLAS job with PandaID=6592811147
[2025-04-07 14:51:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-07 17:52:29]  *** The last 200 lines of the pilot log: ***
[2025-04-07 17:52:29] 2025-04-07 15:52:06,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 17:52:29] 2025-04-07 15:52:07,095 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-07 17:52:29] 2025-04-07 15:52:07,135 | INFO     | job 6592811147 has state=finished
[2025-04-07 17:52:29] 2025-04-07 15:52:07,135 | INFO     | preparing for final server update for job 6592811147 in state='finished'
[2025-04-07 17:52:29] 2025-04-07 15:52:07,136 | INFO     | this job has now completed (state=finished)
[2025-04-07 17:52:29] 2025-04-07 15:52:07,136 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-07 17:52:29] 2025-04-07 15:52:07,136 | INFO     | log transfer has been attempted: DONE
[2025-04-07 17:52:29] 2025-04-07 15:52:07,136 | INFO     | job 6592811147 has finished - writing final server update
[2025-04-07 17:52:29] 2025-04-07 15:52:07,136 | INFO     | total number of processed events: 400 (read)
[2025-04-07 17:52:29] 2025-04-07 15:52:07,137 | INFO     | executing command: lscpu
[2025-04-07 17:52:29] 2025-04-07 15:52:07,156 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-07 17:52:29] 2025-04-07 15:52:08,682 | INFO     | monitor loop #768: job 0:6592811147 is in state 'finished'
[2025-04-07 17:52:29] 2025-04-07 15:52:08,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 17:52:29] 2025-04-07 15:52:11,185 | INFO     | monitor loop #769: job 0:6592811147 is in state 'finished'
[2025-04-07 17:52:29] 2025-04-07 15:52:11,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-07 17:52:29] 2025-04-07 15:52:13,573 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-07 17:52:29] 2025-04-07 15:52:13,573 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6592811147/memory_monitor_summary.json (trf name=prmon)
[2025-04-07 17:52:29] 2025-04-07 15:52:13,573 | INFO     | extracted standard info from prmon json
[2025-04-07 17:52:29] 2025-04-07 15:52:13,573 | INFO     | extracted standard memory fields from prmon json
[2025-04-07 17:52:29] 2025-04-07 15:52:13,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-07 17:52:29] 2025-04-07 15:52:13,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-07 17:52:29] 2025-04-07 15:52:13,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-07 17:52:29] 2025-04-07 15:52:13,575 | INFO     | fitting pss+swap vs Time
[2025-04-07 17:52:29] 2025-04-07 15:52:13,575 | INFO     | sum of square deviations: 1748737904.5
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | sum of deviations: 405124707070.50006
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | mean x: 1744035693.5
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | mean y: 1772205.6011235956
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | -- intersect: -404033588171.45984
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | intersect: -404033588171.45984
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | chi2: 13.717443958746333
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | sum of square deviations: 1605470102.0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | sum of deviations: 387980503136.99994
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | mean x: 1744035541.0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | mean y: 1753951.9132947978
[2025-04-07 17:52:29] 2025-04-07 15:52:13,576 | INFO     | -- intersect: -421464697427.6901
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | intersect: -421464697427.6901
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | chi2: 12.921164863892477
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | current chi2=12.921164863892477 (change=5.804864938749348 %)
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | right removable region: 172
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | sum of square deviations: 1605470102.0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | sum of deviations: 359867797855.9999
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | mean x: 1744035846.0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | mean y: 1820371.9595375722
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | -- intersect: -390925633524.62244
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | intersect: -390925633524.62244
[2025-04-07 17:52:29] 2025-04-07 15:52:13,577 | INFO     | chi2: 10.736432186258337
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | current chi2=10.736432186258337 (change=21.73153964727724 %)
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | left removable region: 10
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | sum of square deviations: 1318277740.5
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | sum of deviations: 299340538736.5
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | mean x: 1744035815.5
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | mean y: 1850386.0308641975
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | -- intersect: -396015320008.96686
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | intersect: -396015320008.96686
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | chi2: 7.316265672821346
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | -- intersect: -396015320008.96686
[2025-04-07 17:52:29] 2025-04-07 15:52:13,578 | INFO     | current memory leak: 227.07 B/s (using 162 data points, chi2=7.32)
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | ..............................
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | . Timing measurements:
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | . get job = 0 s
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | . initial setup = 0 s
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | . payload setup = 2 s
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | . stage-in = 0 s
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | . payload execution = 10827 s
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | . stage-out = 1 s
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | . log creation = 0 s
[2025-04-07 17:52:29] 2025-04-07 15:52:13,579 | INFO     | ..............................
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | 
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | job summary report
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | --------------------------------------------------
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | PanDA job id: 6592811147
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | task id: 43996505
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | errors: (none)
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | pilot state: finished 
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | transexitcode: 0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | exeerrorcode: 0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | exeerrordiag: 
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | exitcode: 0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | exitmsg: OK
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | cpuconsumptiontime: 19928 s
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | nevents: 400
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | neventsw: 0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | pid: 37245
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | pgrp: 37245
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | corecount: 4
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | event service: False
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | sizes: {0: 2417379, 2: 2417585, 11: 2417613, 10834: 2446071, 10836: 2455026, 10837: 2455082, 10844: 2455380}
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | --------------------------------------------------
[2025-04-07 17:52:29] 2025-04-07 15:52:13,621 | INFO     | 
[2025-04-07 17:52:29] 2025-04-07 15:52:13,622 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-07 17:52:29] 2025-04-07 15:52:13,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-07 17:52:29] 2025-04-07 15:52:13,634 | INFO     | job 6592811147 has completed (purged errors)
[2025-04-07 17:52:29] 2025-04-07 15:52:13,634 | INFO     | overall cleanup function is called
[2025-04-07 17:52:29] 2025-04-07 15:52:14,641 | INFO     | --- collectZombieJob: --- 10, [37245]
[2025-04-07 17:52:29] 2025-04-07 15:52:14,641 | INFO     | zombie collector waiting for pid 37245
[2025-04-07 17:52:29] 2025-04-07 15:52:14,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-07 17:52:29] 2025-04-07 15:52:14,641 | INFO     | collected zombie processes
[2025-04-07 17:52:29] 2025-04-07 15:52:14,641 | INFO     | will attempt to kill all subprocesses of pid=37245
[2025-04-07 17:52:29] 2025-04-07 15:52:14,699 | INFO     | process IDs to be killed: [37245] (in reverse order)
[2025-04-07 17:52:29] 2025-04-07 15:52:14,728 | WARNING  | found no corresponding commands to process id(s)
[2025-04-07 17:52:29] 2025-04-07 15:52:14,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-07 17:52:29] 2025-04-07 15:52:14,730 | INFO     | did not find any defunct processes belonging to 37245
[2025-04-07 17:52:29] 2025-04-07 15:52:14,731 | INFO     | did not find any defunct processes belonging to 37245
[2025-04-07 17:52:29] 2025-04-07 15:52:14,732 | INFO     | ready for new job
[2025-04-07 17:52:29] 2025-04-07 15:52:14,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-07 17:52:29] 2025-04-07 15:52:14,732 | INFO     | **************************************
[2025-04-07 17:52:29] 2025-04-07 15:52:14,733 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-07 17:52:29] 2025-04-07 15:52:14,733 | INFO     | **************************************
[2025-04-07 17:52:29] 2025-04-07 15:52:14,733 | INFO     | 
[2025-04-07 17:52:29] 2025-04-07 15:52:14,733 | INFO     | architecture information:
[2025-04-07 17:52:29] 2025-04-07 15:52:14,734 | INFO     | executing command: cat /etc/os-release
[2025-04-07 17:52:29] 2025-04-07 15:52:14,743 | INFO     | cat /etc/os-release:
[2025-04-07 17:52:29] NAME="CentOS Linux"
[2025-04-07 17:52:29] VERSION="7 (Core)"
[2025-04-07 17:52:29] ID="centos"
[2025-04-07 17:52:29] ID_LIKE="rhel fedora"
[2025-04-07 17:52:29] VERSION_ID="7"
[2025-04-07 17:52:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-07 17:52:29] ANSI_COLOR="0;31"
[2025-04-07 17:52:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-07 17:52:29] HOME_URL="https://www.centos.org/"
[2025-04-07 17:52:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-07 17:52:29] 
[2025-04-07 17:52:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-07 17:52:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-07 17:52:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-07 17:52:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-07 17:52:29] 
[2025-04-07 17:52:29] 2025-04-07 15:52:14,743 | INFO     | **************************************
[2025-04-07 17:52:29] 2025-04-07 15:52:15,246 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-04-07 17:52:29] 2025-04-07 15:52:15,259 | INFO     | sufficient remaining disk space (3622575276032 B)
[2025-04-07 17:52:29] 2025-04-07 15:52:15,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-07 17:52:29] 2025-04-07 15:52:15,259 | INFO     | current server update state: UPDATING_FINAL
[2025-04-07 17:52:29] 2025-04-07 15:52:15,259 | INFO     | update_server=False
[2025-04-07 17:52:29] 2025-04-07 15:52:15,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-07 17:52:29] 2025-04-07 15:52:15,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-07 17:52:29] 2025-04-07 15:52:15,259 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-07 17:52:29] 2025-04-07 15:52:15,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-07 17:52:29] 2025-04-07 15:52:15,260 | INFO     | found 0 job(s) in 20 queues
[2025-04-07 17:52:29] 2025-04-07 15:52:15,260 | INFO     | aborting loop
[2025-04-07 17:52:29] 2025-04-07 15:52:15,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-07 17:52:29] 2025-04-07 15:52:15,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-07 17:52:29] 2025-04-07 15:52:15,856 | INFO     | all payload control threads have been joined
[2025-04-07 17:52:29] 2025-04-07 15:52:16,178 | INFO     | all data control threads have been joined
[2025-04-07 17:52:29] 2025-04-07 15:52:16,265 | INFO     | [job] retrieve thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,265 | INFO     | [job] queue monitor thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,265 | INFO     | [job] job monitor thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,360 | INFO     | [payload] failed_post thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-07 17:52:29] 2025-04-07 15:52:16,586 | INFO     | all job control threads have been joined
[2025-04-07 17:52:29] 2025-04-07 15:52:16,678 | INFO     | [data] copytool_in thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,737 | INFO     | [job] validate thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,862 | INFO     | [payload] control thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,874 | INFO     | [payload] validate_pre thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,924 | INFO     | [payload] execute_payloads thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:16,960 | INFO     | [job] create_data_payload thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:17,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:17,184 | INFO     | [data] control thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:17,591 | INFO     | [job] control thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:17,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-07 17:52:29] 2025-04-07 15:52:17,761 | INFO     | [payload] validate_post thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:18,519 | INFO     | [data] copytool_out thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:21,653 | INFO     | [data] queue_monitor thread has finished
[2025-04-07 17:52:29] 2025-04-07 15:52:23,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129633176905536)>', '<ExcThread(monitor, started 129632380647168)>']
[2025-04-07 17:52:29] 2025-04-07 15:52:24,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-07 17:52:29] 2025-04-07 15:52:24,305 | INFO     | [monitor] control thread has ended
[2025-04-07 17:52:29] 2025-04-07 15:52:28,639 | INFO     | all workflow threads have been joined
[2025-04-07 17:52:29] 2025-04-07 15:52:28,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-07 17:52:29] 2025-04-07 15:52:28,642 | INFO     | traces error code: 0
[2025-04-07 17:52:29] 2025-04-07 15:52:28,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-07 17:52:29] 2025-04-07 15:52:28,694 [wrapper] ==== pilot stdout END ====
[2025-04-07 17:52:29] 2025-04-07 15:52:28,696 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-07 17:52:29] 2025-04-07 15:52:28,697 [wrapper] pilotpid: 30669
[2025-04-07 17:52:29] 2025-04-07 15:52:28,699 [wrapper] Pilot exit status: 0
[2025-04-07 17:52:29] 2025-04-07 15:52:29,562 [wrapper] pandaids: 6592811147 6592811147
[2025-04-07 17:52:29] 2025-04-07 15:52:29,580 [wrapper] cleanup supervisor_pilot   61206 30670
[2025-04-07 17:52:29] 2025-04-07 15:52:29,582 [wrapper] Test setup, not cleaning
[2025-04-07 17:52:29] 2025-04-07 15:52:29,583 [wrapper] apfmon messages muted
[2025-04-07 17:52:29] 2025-04-07 15:52:29,585 [wrapper] ==== wrapper stdout END ====
[2025-04-07 17:52:29] 2025-04-07 15:52:29,586 [wrapper] ==== wrapper stderr END ====
[2025-04-07 17:52:29]  *** Error codes and diagnostics ***
[2025-04-07 17:52:29]     "exeErrorCode": 0,
[2025-04-07 17:52:29]     "exeErrorDiag": "",
[2025-04-07 17:52:29]     "pilotErrorCode": 0,
[2025-04-07 17:52:29]     "pilotErrorDiag": "",
[2025-04-07 17:52:29]  *** Listing of results directory ***
[2025-04-07 17:52:29] insgesamt 929916
[2025-04-07 17:52:29] drwx------ 4 boinc boinc      4096 Apr  3 10:00 pilot3
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc    495897 Apr  7 13:47 pilot3.tar.gz
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc      5111 Apr  7 13:50 queuedata.json
[2025-04-07 17:52:29] -rwx------ 1 boinc boinc     37140 Apr  7 13:50 runpilot2-wrapper.sh
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc       100 Apr  7 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-07 17:52:29] -rwxr-xr-x 1 boinc boinc      7986 Apr  7 13:52 run_atlas
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc       105 Apr  7 13:52 job.xml
[2025-04-07 17:52:29] -rw-r--r-- 3 boinc boinc 352109675 Apr  7 13:52 EVNT.43996499._000003.pool.root.1
[2025-04-07 17:52:29] -rw-r--r-- 3 boinc boinc 352109675 Apr  7 13:52 ATLAS.root_0
[2025-04-07 17:52:29] -rw-r--r-- 2 boinc boinc     17569 Apr  7 13:52 start_atlas.sh
[2025-04-07 17:52:29] drwxrwx--x 2 boinc boinc      4096 Apr  7 13:52 shared
[2025-04-07 17:52:29] -rw-r--r-- 2 boinc boinc    508892 Apr  7 13:52 input.tar.gz
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc         0 Apr  7 13:52 boinc_lockfile
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc      2586 Apr  7 14:51 pandaJob.out
[2025-04-07 17:52:29] -rw------- 1 boinc boinc       424 Apr  7 14:51 setup.sh.local
[2025-04-07 17:52:29] -rw------- 1 boinc boinc    983715 Apr  7 14:51 agis_schedconf.cvmfs.json
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc      9257 Apr  7 14:54 init_data.xml
[2025-04-07 17:52:29] -rw------- 1 boinc boinc        96 Apr  7 17:51 pilot_heartbeat.json
[2025-04-07 17:52:29] -rw------- 1 boinc boinc 241594475 Apr  7 17:51 HITS.43996505._000058.pool.root.1
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc       532 Apr  7 17:51 boinc_task_state.xml
[2025-04-07 17:52:29] -rw------- 1 boinc boinc      1016 Apr  7 17:52 memory_monitor_summary.json
[2025-04-07 17:52:29] -rw------- 1 boinc boinc   1603526 Apr  7 17:52 agis_ddmendpoints.agis.ALL.json
[2025-04-07 17:52:29] -rw------- 1 boinc boinc    338217 Apr  7 17:52 log.43996505._000058.job.log.tgz.1
[2025-04-07 17:52:29] -rw------- 1 boinc boinc      7643 Apr  7 17:52 heartbeat.json
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc      8192 Apr  7 17:52 boinc_mmap_file
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc        28 Apr  7 17:52 wrapper_checkpoint.txt
[2025-04-07 17:52:29] -rw------- 1 boinc boinc      4485 Apr  7 17:52 pilotlog.txt
[2025-04-07 17:52:29] -rw------- 1 boinc boinc    940096 Apr  7 17:52 log.43996505._000058.job.log.1
[2025-04-07 17:52:29] -rw------- 1 boinc boinc       357 Apr  7 17:52 output.list
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc       620 Apr  7 17:52 runtime_log
[2025-04-07 17:52:29] -rw------- 1 boinc boinc   1300480 Apr  7 17:52 result.tar.gz
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc     11147 Apr  7 17:52 runtime_log.err
[2025-04-07 17:52:29] -rw------- 1 boinc boinc       765 Apr  7 17:52 HDKNDm7A0L7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWBJLDmNGzsTn.diag
[2025-04-07 17:52:29] -rw-r--r-- 1 boinc boinc     23612 Apr  7 17:52 stderr.txt
[2025-04-07 17:52:29] HITS file was successfully produced:
[2025-04-07 17:52:29] -rw------- 1 boinc boinc 241594475 Apr  7 17:51 shared/HITS.pool.root.1
[2025-04-07 17:52:29]  *** Contents of shared directory: ***
[2025-04-07 17:52:29] insgesamt 581596
[2025-04-07 17:52:29] -rw-r--r-- 3 boinc boinc 352109675 Apr  7 13:52 ATLAS.root_0
[2025-04-07 17:52:29] -rw-r--r-- 2 boinc boinc     17569 Apr  7 13:52 start_atlas.sh
[2025-04-07 17:52:29] -rw-r--r-- 2 boinc boinc    508892 Apr  7 13:52 input.tar.gz
[2025-04-07 17:52:29] -rw------- 1 boinc boinc 241594475 Apr  7 17:51 HITS.pool.root.1
[2025-04-07 17:52:29] -rw------- 1 boinc boinc   1300480 Apr  7 17:52 result.tar.gz
17:52:31 (26425): run_atlas exited; CPU time 19974.212639
17:52:31 (26425): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN